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ONTOLOGY REPORT - ANNOTATIONS


Term:dense core granule transport
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Accession:GO:1901950 term browser browse the term
Definition:The directed movement a dense core granule within a cell.
Comment:goslim_synapse
Synonyms:exact_synonym: dense core vesicle transport



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anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in ISO GO_Central GO_REF:0000096 NCBI chr 1:92,943,180...93,029,760
Ensembl chr 1:92,943,186...93,029,673
JBrowse link
G Kif1b kinesin family member 1B involved_in ISO GO_Central GO_REF:0000096 NCBI chr 4:149,260,776...149,392,762
Ensembl chr 4:149,260,776...149,392,150
JBrowse link
G Kif1c kinesin family member 1C involved_in ISO GO_Central GO_REF:0000096 NCBI chr11:70,591,170...70,622,796
Ensembl chr11:70,591,374...70,622,790
JBrowse link
G Sybu syntabulin (syntaxin-interacting) involved_in ISO
IEA
RGD
Ensembl
GO_Central
PMID:17611281 GO_REF:0000096 GO_REF:0000107 RGD:13217407 NCBI chr15:44,535,252...44,651,466
Ensembl chr15:44,535,252...44,651,459
JBrowse link
dense core granule cytoskeletal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000096 NCBI chr 1:92,943,180...93,029,760
Ensembl chr 1:92,943,186...93,029,673
JBrowse link
G Ppfia2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 involved_in ISO
ISS
GO_Central
UniProt
GO_REF:0000024 GO_REF:0000119 NCBI chr10:106,305,129...106,769,329
Ensembl chr10:106,306,200...106,771,813
JBrowse link
G Syt4 synaptotagmin IV involved_in IMP
ISO
(PMID:29166604) UniProt
GO_Central
PMID:29166604 GO_REF:0000096 NCBI chr18:31,570,861...31,580,468
Ensembl chr18:31,570,861...31,580,459
JBrowse link
G Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in ISS
ISO
UniProt
GO_Central
GO_REF:0000024 GO_REF:0000096 NCBI chr11:105,480,458...105,820,130
Ensembl chr11:105,480,812...105,820,130
JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2 microtubule-associated protein 2 involved_in ISO GO_Central GO_REF:0000096 NCBI chr 1:66,214,337...66,481,742
Ensembl chr 1:66,214,432...66,481,742
JBrowse link
G Mecp2 methyl CpG binding protein 2 involved_in ISO
IEA
RGD
Ensembl
GO_Central
PMID:22127389 GO_REF:0000096 GO_REF:0000107 RGD:12790715 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296
JBrowse link
G Trim46 tripartite motif-containing 46 involved_in ISO
IEA
GO_Central
Ensembl
GO_REF:0000096 GO_REF:0000107 NCBI chr 3:89,141,476...89,153,655
Ensembl chr 3:89,141,484...89,153,616
JBrowse link
positive regulation of dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eipr1 EARP complex and GARP complex interacting protein 1 involved_in ISS (PMID:27191843) UniProt PMID:27191843 NCBI chr12:28,801,802...28,917,493
Ensembl chr12:28,801,802...28,919,864
JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mecp2 methyl CpG binding protein 2 involved_in ISO
IEA
RGD
Ensembl
GO_Central
PMID:22127389 GO_REF:0000096 GO_REF:0000107 RGD:12790715 NCBI chr  X:73,070,198...73,129,296
Ensembl chr  X:73,070,198...73,129,296
JBrowse link
regulation of dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO GO_Central GO_REF:0000096 NCBI chr14:33,099,855...33,169,213
Ensembl chr14:33,099,855...33,169,115
JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kif1a kinesin family member 1A involved_in ISO
IBA
GO_Central GO_REF:0000033 GO_REF:0000096 NCBI chr 1:92,943,180...93,029,760
Ensembl chr 1:92,943,186...93,029,673
JBrowse link
G Kif1b kinesin family member 1B involved_in IBA
ISO
GO_Central GO_REF:0000033 GO_REF:0000096 NCBI chr 4:149,260,776...149,392,762
Ensembl chr 4:149,260,776...149,392,150
JBrowse link
G Kif1c kinesin family member 1C involved_in IBA
ISO
GO_Central GO_REF:0000033 GO_REF:0000096 NCBI chr11:70,591,170...70,622,796
Ensembl chr11:70,591,374...70,622,790
JBrowse link
G Kif5a kinesin family member 5A involved_in ISO GO_Central GO_REF:0000096 NCBI chr10:127,061,564...127,102,217
Ensembl chr10:127,061,565...127,099,217
JBrowse link
G Kif5b kinesin family member 5B involved_in ISO GO_Central GO_REF:0000096 NCBI chr18:6,201,005...6,241,524
Ensembl chr18:6,201,002...6,242,174
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28725
    localization 5673
      establishment of localization 4980
        establishment of organelle localization 509
          establishment of vesicle localization 207
            dense core granule transport 14
              dense core granule cytoskeletal transport + 12
              negative regulation of dense core granule transport + 0
              positive regulation of dense core granule transport + 4
              regulation of dense core granule transport + 5
Path 2
Term Annotations click to browse term
  biological_process 28725
    localization 5673
      establishment of localization 4980
        transport 4661
          intracellular transport 1393
            cytosolic transport 135
              dense core granule transport 14
                dense core granule cytoskeletal transport + 12
                negative regulation of dense core granule transport + 0
                positive regulation of dense core granule transport + 4
                regulation of dense core granule transport + 5
paths to the root