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ONTOLOGY REPORT - ANNOTATIONS


Term:dense core granule transport
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Accession:GO:1901950 term browser browse the term
Definition:The directed movement a dense core granule within a cell.
Comment:goslim_synapse
Synonyms:exact_synonym: dense core vesicle transport



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anterograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF1A kinesin family member 1A involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:240,713,767...240,821,403
Ensembl chr 2:240,713,761...240,824,293
JBrowse link
G KIF1B kinesin family member 1B involved_in ISO PMID:28426968 ARUK-UCL PMID:28426968 RGD:13514087 NCBI chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603
JBrowse link
G KIF1C kinesin family member 1C involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr17:4,997,950...5,028,401
Ensembl chr17:4,997,950...5,028,401
JBrowse link
G KIF5B kinesin family member 5B involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425
JBrowse link
G SYBU syntabulin involved_in ISO
IEA
RGD
Ensembl
PMID:17611281 GO_REF:0000107 RGD:13217407 NCBI chr 8:109,573,978...109,691,600
Ensembl chr 8:109,573,978...109,691,791
JBrowse link
dense core granule cytoskeletal transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF1A kinesin family member 1A involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:240,713,767...240,821,403
Ensembl chr 2:240,713,761...240,824,293
JBrowse link
G PPFIA2 PTPRF interacting protein alpha 2 involved_in IMP (PMID:30021165) UniProt PMID:30021165 NCBI chr12:81,257,975...81,759,350
Ensembl chr12:81,257,975...81,759,553
JBrowse link
G SYT4 synaptotagmin 4 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr18:43,267,892...43,277,490
Ensembl chr18:43,267,892...43,277,535
JBrowse link
G TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:62,966,235...63,427,703
Ensembl chr17:62,966,235...63,427,703
JBrowse link
positive regulation of anterograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAP2 microtubule associated protein 2 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:209,424,047...209,734,112
Ensembl chr 2:209,424,047...209,734,147
JBrowse link
G MECP2 methyl-CpG binding protein 2 involved_in ISO
IEA
RGD
Ensembl
PMID:22127389 GO_REF:0000107 RGD:12790715 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
G TRIM46 tripartite motif containing 46 involved_in IEA
ISS
Ensembl
ARUK-UCL
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:155,173,849...155,184,971
Ensembl chr 1:155,173,787...155,184,971
JBrowse link
positive regulation of retrograde dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MECP2 methyl-CpG binding protein 2 involved_in ISO
IEA
RGD
Ensembl
PMID:22127389 GO_REF:0000107 RGD:12790715 NCBI chr  X:154,021,573...154,097,717
Ensembl chr  X:154,021,573...154,137,103
JBrowse link
regulation of dense core granule transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAPK8 mitogen-activated protein kinase 8 involved_in ISO PMID:29166604 UniProt PMID:29166604 RGD:15023486 NCBI chr10:48,306,677...48,439,360
Ensembl chr10:48,306,639...48,439,360
JBrowse link
retrograde neuronal dense core vesicle transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KIF1A kinesin family member 1A involved_in ISS
IBA
ARUK-UCL
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr 2:240,713,767...240,821,403
Ensembl chr 2:240,713,761...240,824,293
JBrowse link
G KIF1B kinesin family member 1B involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:10,210,570...10,381,603
Ensembl chr 1:10,210,570...10,381,603
JBrowse link
G KIF1C kinesin family member 1C involved_in ISS
IBA
ARUK-UCL
GO_Central
GO_REF:0000024 GO_REF:0000033 NCBI chr17:4,997,950...5,028,401
Ensembl chr17:4,997,950...5,028,401
JBrowse link
G KIF5A kinesin family member 5A involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr12:57,550,044...57,586,633
Ensembl chr12:57,546,026...57,586,633
JBrowse link
G KIF5B kinesin family member 5B involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr10:32,009,015...32,056,425
Ensembl chr10:32,009,015...32,056,425
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19696
    localization 5926
      establishment of localization 5216
        establishment of organelle localization 536
          establishment of vesicle localization 226
            dense core granule transport 13
              dense core granule cytoskeletal transport + 12
              negative regulation of dense core granule transport + 0
              positive regulation of dense core granule transport + 3
              regulation of dense core granule transport + 4
Path 2
Term Annotations click to browse term
  biological_process 19696
    localization 5926
      establishment of localization 5216
        transport 4879
          intracellular transport 1497
            cytosolic transport 155
              dense core granule transport 13
                dense core granule cytoskeletal transport + 12
                negative regulation of dense core granule transport + 0
                positive regulation of dense core granule transport + 3
                regulation of dense core granule transport + 4
paths to the root