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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of muscle tissue development
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Accession:GO:1901861 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of muscle tissue development.


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negative regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF3 fibroblast growth factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,489,208...3,496,532
Ensembl chr 2:3,489,208...3,496,532
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:112,808,215...112,814,225
Ensembl chr14:112,808,210...112,814,134
JBrowse link
negative regulation of muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:61,029,186...61,045,400 JBrowse link
G IGFBP5 insulin like growth factor binding protein 5 involved_in ISO (MGI:3039207|PMID:15010534) BHF-UCL PMID:15010534 MGI:3039207 NCBI chr15:118,861,816...118,877,787
Ensembl chr15:118,857,479...118,878,522
JBrowse link
G LOC100738836 insulin-like growth factor-binding protein 5 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr15:118,857,479...118,878,522 JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRAS NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 4:105,845,913...105,853,769
Ensembl chr 4:105,845,872...105,858,227
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link
G TSC22D3 TSC22 domain family member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) MGI PMID:20124407 MGI:4838954 NCBI chr  X:88,171,325...88,233,583
Ensembl chr  X:88,171,329...88,233,964
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) MGI PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr 9:88,286,911...88,290,131 JBrowse link
G USP19 ubiquitin specific peptidase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:31,726,668...31,738,135
Ensembl chr13:31,726,731...31,738,770
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,480...46,590,265
JBrowse link
G YBX3 Y-box binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3808638|PMID:18676817) Ensembl
MGI
PMID:18676817 GO_REF:0000107 MGI:3808638 NCBI chr 5:61,337,868...61,361,269
Ensembl chr 5:61,337,863...61,361,280
JBrowse link
negative regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor ISO RGD PMID:16723531 RGD:1580249 NCBI chr 2:32,623,668...32,679,293
Ensembl chr 2:32,623,268...32,679,164
JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO (PMID:14749725) MGI PMID:14749725 NCBI chr 1:183,415,989...183,422,888
Ensembl chr 1:183,416,134...183,792,417
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3656361|PMID:16936075) Ensembl
MGI
PMID:16936075 GO_REF:0000107 MGI:3656361 NCBI chr 8:113,824,511...113,944,078
Ensembl chr 8:113,824,547...113,944,078
JBrowse link
G LUC7L LUC7 like acts_upstream_of_or_within ISO (MGI:3055693|PMID:15474286) MGI PMID:15474286 MGI:3055693 NCBI chr 3:41,442,127...41,473,115
Ensembl chr 3:41,437,262...41,473,112
JBrowse link
G SIRT2 sirtuin 2 involved_in ISO (PMID:12887892) UniProt PMID:12887892 NCBI chr 6:47,682,427...47,703,408
Ensembl chr 6:47,682,424...47,703,529
JBrowse link
G SOX15 SRY-box transcription factor 15 acts_upstream_of_or_within ISO (MGI:1858709|PMID:10821863) MGI PMID:10821863 MGI:1858709 NCBI chr12:52,882,840...52,885,785 JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in ISO (MGI:1201268|PMID:9520323) UniProt PMID:9520323 MGI:1201268 NCBI chr 9:88,286,911...88,290,131 JBrowse link
positive regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREB1 cAMP responsive element binding protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5571433|PMID:24364879) Ensembl
MGI
PMID:24364879 GO_REF:0000107 MGI:5571433 NCBI chr15:110,705,548...110,773,037
Ensembl chr15:110,697,408...110,771,755
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5571433|PMID:24364879) Ensembl
MGI
PMID:24364879 GO_REF:0000107 MGI:5571433 NCBI chr 5:21,474,218...21,495,040
Ensembl chr 5:21,431,656...21,496,279
JBrowse link
positive regulation of muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,961,909
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,860,386...5,873,779
Ensembl chr 2:5,858,845...5,874,124
JBrowse link
G BCL2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (MGI:1928555|PMID:11146504) MGI PMID:11146504 MGI:1928555 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,288,544...158,518,879
JBrowse link
G LMOD3 leiomodin 3 involved_in ISO (PMID:25250574) UniProt PMID:25250574 NCBI chr13:50,541,407...50,554,346 JBrowse link
G MYF5 myogenic factor 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:100,753,440...100,755,558
Ensembl chr 5:100,752,890...100,755,494
JBrowse link
G MYF6 myogenic factor 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:100,762,918...100,764,771
Ensembl chr 5:100,762,910...100,765,704
JBrowse link
G MYOD1 myogenic differentiation 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:41,422,522...41,424,236
Ensembl chr 2:41,415,735...41,425,234
JBrowse link
G MYOG myogenin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:113,783,233...113,785,312
Ensembl chr 9:113,782,469...113,785,362
JBrowse link
G SHOX2 short stature homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:97,879,586...97,892,276
Ensembl chr13:97,879,281...97,890,447
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3522534|PMID:15572127) Ensembl
MGI
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr 9:53,079,543...53,178,881
Ensembl chr 9:53,079,550...53,178,881
JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:25,163,550...25,208,314
Ensembl chr13:25,137,173...25,208,311
JBrowse link
G FLOT1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,253,157...23,265,165
Ensembl chr 7:23,253,160...23,265,106
JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:19388010 RGD:2317940 NCBI chr 2:84,380,245...84,401,117
Ensembl chr 2:84,380,225...84,402,956
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 2:96,122,407...96,296,927
Ensembl chr 2:96,122,407...96,296,842
JBrowse link
G MIR214 microRNA mir-214 acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 9:114,527,992...114,528,101
Ensembl chr 9:114,527,990...114,528,101
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5569711|PMID:23926128) Ensembl
MGI
PMID:23926128 GO_REF:0000107 MGI:5569711 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,321...25,783,610
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1929969|PMID:11171399) Ensembl
MGI
PMID:11171399 GO_REF:0000107 MGI:1929969 NCBI chr18:2,546,202...2,555,484
Ensembl chr18:2,545,718...2,555,484
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 9:46,563,469...46,590,392
Ensembl chr 9:46,563,480...46,590,265
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:51,153,978...51,203,678
Ensembl chr 2:51,154,086...51,202,176
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:5,860,386...5,873,779
Ensembl chr 2:5,858,845...5,874,124
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:16177600 RGD:1598747 NCBI chr 2:150,032,649...150,035,591
Ensembl chr 2:150,032,782...150,035,591
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:198,815...211,346
Ensembl chr 1:199,231...211,344
JBrowse link
G IGF2 insulin like growth factor 2 involved_in ISO (MGI:6120647|PMID:29440408) UniProt PMID:29440408 MGI:6120647 NCBI chr 2:1,469,183...1,496,417 JBrowse link
G MTM1 myotubularin 1 acts_upstream_of_or_within ISO (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chr  X:122,286,904...122,379,302
Ensembl chr  X:122,286,916...122,379,299
JBrowse link
G NACA nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chr 5:22,044,569...22,058,096 JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 ISO RGD PMID:16408196 RGD:1643018 NCBI chr12:36,111,584...36,159,287
Ensembl chr12:36,111,653...36,160,376
JBrowse link
positive regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:3513707|PMID:15601660) MGI PMID:15601660 MGI:3513707 NCBI chr 1:40,988,818...41,002,129
Ensembl chr 1:40,988,515...41,002,137
JBrowse link
G MRTFB myocardin related transcription factor B involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:28,964,758...29,240,125
Ensembl chr 3:28,964,754...29,167,631
JBrowse link
regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JPH2 junctophilin 2 involved_in ISO (MGI:1861885|PMID:10949023) UniProt PMID:10949023 MGI:1861885 NCBI chr17:46,590,302...46,665,326 JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr15:64,749,478...64,891,653
Ensembl chr15:64,748,761...64,892,153
JBrowse link
G MEGF10 multiple EGF like domains 10 involved_in ISO (PMID:22101682) UniProt PMID:22101682 NCBI chr 2:130,226,222...130,403,960 JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:4879035|PMID:21177349) MGI PMID:21177349 MGI:4879035 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,694...123,546,417
JBrowse link
G WNT10B Wnt family member 10B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3581945|PMID:15673614) Ensembl
MGI
PMID:15673614 GO_REF:0000107 MGI:3581945 NCBI chr 5:14,997,377...15,013,928
Ensembl chr 5:14,997,381...15,013,919
JBrowse link
regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPF centromere protein F acts_upstream_of_or_within ISO (MGI:1339480|PMID:10373470) MGI PMID:10373470 MGI:1339480 NCBI chr 9:128,948,386...129,012,241
Ensembl chr 9:128,948,497...129,012,218
JBrowse link
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5634219|PMID:25715398) Ensembl
MGI
PMID:25715398 GO_REF:0000107 MGI:5634219 NCBI chr 2:125,595,115...125,607,026
Ensembl chr 2:125,593,116...125,607,594
JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2153314|PMID:11711431) Ensembl
MGI
PMID:11711431 GO_REF:0000107 MGI:2153314 NCBI chr 1:164,998,457...165,124,455
Ensembl chr 1:164,998,083...165,124,454
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2153314|PMID:11711431) UniProt
MGI
PMID:11711431 GO_REF:0000024 MGI:2153314 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16534
    developmental process 6310
      regulation of developmental process 2541
        regulation of muscle tissue development 54
          negative regulation of muscle tissue development + 18
          positive regulation of muscle tissue development + 29
          regulation of smooth muscle tissue development + 0
          regulation of striated muscle tissue development + 50
Path 2
Term Annotations click to browse term
  biological_process 16534
    developmental process 6310
      anatomical structure development 5827
        tissue development 1994
          muscle tissue development 468
            regulation of muscle tissue development 54
              negative regulation of muscle tissue development + 18
              positive regulation of muscle tissue development + 29
              regulation of smooth muscle tissue development + 0
              regulation of striated muscle tissue development + 50
paths to the root