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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of muscle tissue development
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Accession:GO:1901861 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of muscle tissue development.


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negative regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf3 fibroblast growth factor 3 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:144,838,612...144,843,348
Ensembl chr 7:144,838,083...144,844,436
JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr19:45,736,491...45,742,941
Ensembl chr19:45,736,798...45,742,915
JBrowse link
negative regulation of muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin involved_in IMP (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chr11:59,791,408...59,810,039
Ensembl chr11:59,791,408...59,810,016
JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 involved_in IMP (MGI:3039207|PMID:15010534) BHF-UCL PMID:15010534 MGI:3039207 NCBI chr 1:72,858,065...72,874,865
Ensembl chr 1:72,857,932...72,874,884
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras neuroblastoma ras oncogene acts_upstream_of_or_within IDA
IGI
(MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 3:103,058,285...103,067,914
Ensembl chr 3:103,058,285...103,067,914
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:25,687,002...25,705,077
Ensembl chr 7:25,687,002...25,705,077
JBrowse link
G Tsc22d3 TSC22 domain family, member 3 acts_upstream_of_or_within IDA (MGI:4838954|PMID:20124407) MGI PMID:20124407 MGI:4838954 NCBI chr  X:140,539,528...140,600,522
Ensembl chr  X:140,539,528...140,600,659
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 acts_upstream_of_or_within IDA (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) MGI PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr12:33,957,671...33,959,831
Ensembl chr12:33,957,671...33,959,829
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IMP (MGI:5315325|PMID:21971047) UniProt PMID:21971047 MGI:5315325 NCBI chr 9:108,490,607...108,502,337
Ensembl chr 9:108,490,602...108,502,337
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:44,067,021...44,095,627
Ensembl chr 9:44,067,021...44,095,627
JBrowse link
G Ybx3 Y box protein 3 acts_upstream_of_or_within IDA (MGI:3808638|PMID:18676817) MGI PMID:18676817 MGI:3808638 NCBI chr 6:131,364,858...131,388,450
Ensembl chr 6:131,364,855...131,388,476
JBrowse link
negative regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor involved_in ISO RGD
MGI
PMID:16723531 GO_REF:0000096 MGI:4417868 RGD:1580249 NCBI chr 2:109,674,700...109,727,043
Ensembl chr 2:109,674,700...109,727,007
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within ISO MGI GO_REF:0000008 MGI:2154458 NCBI chr14:46,383,525...46,390,669
Ensembl chr14:46,383,520...46,390,669
JBrowse link
G Hdac5 histone deacetylase 5 involved_in TAS (MGI:3687879|PMID:12711221) UniProt PMID:12711221 MGI:3687879 NCBI chr11:102,195,747...102,230,172
Ensembl chr11:102,194,432...102,230,166
JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS (MGI:3687879|PMID:12711221) UniProt PMID:12711221 MGI:3687879 NCBI chr15:97,792,661...97,844,502
Ensembl chr15:97,792,664...97,844,502
JBrowse link
G Hdac9 histone deacetylase 9 involved_in TAS (MGI:3687879|PMID:12711221) UniProt PMID:12711221 MGI:3687879 NCBI chr12:34,047,580...34,917,095
Ensembl chr12:34,047,580...34,917,095
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 acts_upstream_of_or_within IDA (MGI:3656361|PMID:16936075) MGI PMID:16936075 MGI:3656361 NCBI chr 3:131,110,297...131,224,357
Ensembl chr 3:131,110,471...131,224,356
JBrowse link
G Luc7l Luc7-like acts_upstream_of_or_within IDA (MGI:3055693|PMID:15474286) MGI PMID:15474286 MGI:3055693 NCBI chr17:26,252,899...26,285,510
Ensembl chr17:26,252,896...26,285,504
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 7:28,766,752...28,788,665
Ensembl chr 7:28,766,735...28,788,661
JBrowse link
G Sox15 SRY (sex determining region Y)-box 15 acts_upstream_of_or_within IDA (MGI:1858709|PMID:10821863) MGI PMID:10821863 MGI:1858709 NCBI chr11:69,655,037...69,656,727
Ensembl chr11:69,655,314...69,656,727
JBrowse link
G Twist1 twist basic helix-loop-helix transcription factor 1 involved_in IDA (MGI:1201268|PMID:9520323) UniProt PMID:9520323 MGI:1201268 NCBI chr12:33,957,671...33,959,831
Ensembl chr12:33,957,671...33,959,829
JBrowse link
positive regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within IMP (MGI:5571433|PMID:24364879) MGI PMID:24364879 MGI:5571433 NCBI chr 1:64,532,794...64,604,548
Ensembl chr 1:64,532,645...64,604,548
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 acts_upstream_of_or_within IMP (MGI:5571433|PMID:24364879) MGI PMID:24364879 MGI:5571433 NCBI chr10:128,567,523...128,589,635
Ensembl chr10:128,567,523...128,589,652
JBrowse link
positive regulation of muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha involved_in IMP (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chr 5:51,454,249...52,115,853
Ensembl chr 5:51,454,250...51,567,726
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IMP (MGI:3778600|PMID:18178581) UniProt PMID:18178581 MGI:3778600 NCBI chr19:4,861,216...4,877,909
Ensembl chr19:4,861,216...4,877,909
JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 acts_upstream_of_or_within IMP (MGI:1928555|PMID:11146504) MGI PMID:11146504 MGI:1928555 NCBI chr 1:106,538,176...106,714,290
Ensembl chr 1:106,538,178...106,714,274
JBrowse link
G Lmod3 leiomodin 3 (fetal) involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr 6:97,238,530...97,253,217
Ensembl chr 6:97,238,534...97,252,759
JBrowse link
G Myf5 myogenic factor 5 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:107,482,908...107,486,927
Ensembl chr10:107,482,908...107,486,134
JBrowse link
G Myf6 myogenic factor 6 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr10:107,492,848...107,494,723
Ensembl chr10:107,492,853...107,494,737
JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr 7:46,376,474...46,379,092
Ensembl chr 7:46,376,474...46,379,099
JBrowse link
G Myog myogenin involved_in IBA
IMP
(MGI:6201960|PMID:21873635)
(MGI:62381|PMID:8393145)
GO_Central
UniProt
PMID:8393145 PMID:21873635 MGI:6201960 MGI:62381 NCBI chr 1:134,290,004...134,292,548
Ensembl chr 1:134,289,989...134,292,548
JBrowse link
G Shox2 short stature homeobox 2 involved_in IMP (MGI:4946446|PMID:21156168) BHF-UCL PMID:21156168 MGI:4946446 NCBI chr 3:66,971,723...66,981,771
Ensembl chr 3:66,971,727...66,981,771
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion molecule-related/down-regulated by oncogenes acts_upstream_of_or_within IMP (MGI:3522534|PMID:15572127) MGI PMID:15572127 MGI:3522534 NCBI chr 9:35,421,528...35,507,652
Ensembl chr 9:35,421,128...35,507,652
JBrowse link
G Ctnnb1 catenin (cadherin associated protein), beta 1 involved_in IMP (MGI:5619733|PMID:23460868) CACAO PMID:23460868 MGI:5619733 NCBI chr 9:120,933,400...120,960,507
Ensembl chr 9:120,929,216...120,960,507
JBrowse link
G Flot1 flotillin 1 involved_in ISO
IMP
(MGI:5634880|PMID:24046456) MGI
UniProt
PMID:24046456 GO_REF:0000096 MGI:4834177 MGI:5634880 NCBI chr17:35,823,320...35,832,789
Ensembl chr17:35,823,230...35,832,791
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-Coenzyme A reductase involved_in ISO RGD
MGI
PMID:19388010 GO_REF:0000096 MGI:4417868 RGD:2317940 NCBI chr13:96,648,962...96,670,936
Ensembl chr13:96,648,967...96,670,936
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr13:83,504,017...83,667,079
Ensembl chr13:83,504,034...83,667,080
JBrowse link
G Mir214 microRNA 214 acts_upstream_of_or_within IGI
IMP
(MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 1:162,223,368...162,223,477
Ensembl chr 1:162,223,368...162,223,477
JBrowse link
G Prkaa1 protein kinase, AMP-activated, alpha 1 catalytic subunit acts_upstream_of_or_within IMP (MGI:5569711|PMID:23926128) MGI PMID:23926128 MGI:5569711 NCBI chr15:5,143,861...5,181,899
Ensembl chr15:5,143,861...5,181,899
JBrowse link
G Shh sonic hedgehog acts_upstream_of_or_within IMP (MGI:1929969|PMID:11171399) MGI PMID:11171399 MGI:1929969 NCBI chr 5:28,456,840...28,467,101
Ensembl chr 5:28,456,815...28,467,256
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:44,067,021...44,095,627
Ensembl chr 9:44,067,021...44,095,627
JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A involved_in IMP (MGI:2179189|PMID:11856745) CACAO PMID:11856745 MGI:2179189 NCBI chr11:59,248,036...59,290,751
Ensembl chr11:59,248,033...59,290,752
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IMP (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) UniProt PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chr19:4,861,216...4,877,909
Ensembl chr19:4,861,216...4,877,909
JBrowse link
G Adrb2 adrenergic receptor, beta 2 involved_in ISO RGD
MGI
PMID:16177600 GO_REF:0000096 MGI:4417868 RGD:1598747 NCBI chr18:62,177,713...62,179,981
Ensembl chr18:62,177,816...62,179,959
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in IMP (MGI:5608606|PMID:25220152) UniProt PMID:25220152 MGI:5608606 NCBI chr17:15,367,354...15,376,932
Ensembl chr17:15,367,354...15,376,872
JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IMP (MGI:6120647|PMID:29440408) UniProt PMID:29440408 MGI:6120647 NCBI chr 7:142,650,768...142,666,816
Ensembl chr 7:142,650,766...142,666,816
JBrowse link
G Mtm1 X-linked myotubular myopathy gene 1 acts_upstream_of_or_within IMP (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chr  X:71,210,767...71,315,413
Ensembl chr  X:71,210,767...71,315,691
JBrowse link
G Naca nascent polypeptide-associated complex alpha polypeptide involved_in IMP (MGI:4867362|PMID:21071677) BHF-UCL PMID:21071677 MGI:4867362 NCBI chr10:128,035,346...128,048,637
Ensembl chr10:128,035,575...128,048,637
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase, polypeptide 1 involved_in ISO RGD
MGI
PMID:16408196 GO_REF:0000096 MGI:4417868 RGD:1643018 NCBI chr11:86,498,869...86,544,885
Ensembl chr11:86,498,871...86,544,805
JBrowse link
positive regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within IMP (MGI:3513707|PMID:15601660) MGI PMID:15601660 MGI:3513707 NCBI chr10:56,377,300...56,390,419
Ensembl chr10:56,377,330...56,402,513
JBrowse link
G Mrtfb myocardin related transcription factor B involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr16:13,256,056...13,417,529
Ensembl chr16:13,256,481...13,417,529
JBrowse link
regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jph2 junctophilin 2 involved_in IMP (MGI:1861885|PMID:10949023) UniProt PMID:10949023 MGI:1861885 NCBI chr 2:163,336,242...163,398,049
Ensembl chr 2:163,336,242...163,397,993
JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor, type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 2:58,446,438...58,566,828
Ensembl chr 2:58,388,644...58,567,157
JBrowse link
G Megf10 multiple EGF-like-domains 10 involved_in ISO MGI GO_REF:0000096 MGI:4834177 NCBI chr18:57,133,090...57,297,467
Ensembl chr18:57,133,090...57,297,467
JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box acts_upstream_of_or_within IMP (MGI:4879035|PMID:21177349) MGI PMID:21177349 MGI:4879035 NCBI chr19:55,741,797...55,933,659
Ensembl chr19:55,741,820...55,933,654
JBrowse link
G Wnt10b wingless-type MMTV integration site family, member 10B acts_upstream_of_or_within IMP (MGI:3581945|PMID:15673614) MGI PMID:15673614 MGI:3581945 NCBI chr15:98,770,712...98,778,206
Ensembl chr15:98,770,712...98,778,150
JBrowse link
regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Boc biregional cell adhesion molecule-related/down-regulated by oncogenes (Cdon) binding protein acts_upstream_of_or_within ISO (MGI:2152959|PMID:11782431) MGI PMID:11782431 MGI:2152959 NCBI chr16:44,485,045...44,558,870
Ensembl chr16:44,485,049...44,558,897
JBrowse link
G Cdon cell adhesion molecule-related/down-regulated by oncogenes acts_upstream_of_or_within ISO (MGI:2152959|PMID:11782431) MGI PMID:11782431 MGI:2152959 NCBI chr 9:35,421,528...35,507,652
Ensembl chr 9:35,421,128...35,507,652
JBrowse link
G Cenpf centromere protein F acts_upstream_of_or_within IDA (MGI:1339480|PMID:10373470) MGI PMID:10373470 MGI:1339480 NCBI chr 1:189,640,606...189,688,107
Ensembl chr 1:189,640,606...189,688,086
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within IMP (MGI:5634219|PMID:25715398) MGI PMID:25715398 MGI:5634219 NCBI chr18:52,516,060...52,529,867
Ensembl chr18:52,516,067...52,529,867
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within IDA (MGI:2153314|PMID:11711431) MGI PMID:11711431 MGI:2153314 NCBI chr 9:63,646,766...63,757,994
Ensembl chr 9:63,646,767...63,757,994
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within IDA (MGI:2153314|PMID:11711431) MGI PMID:11711431 MGI:2153314 NCBI chr 7:25,687,002...25,705,077
Ensembl chr 7:25,687,002...25,705,077
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28578
    developmental process 7019
      regulation of developmental process 2711
        regulation of muscle tissue development 57
          negative regulation of muscle tissue development + 20
          positive regulation of muscle tissue development + 29
          regulation of smooth muscle tissue development + 0
          regulation of striated muscle tissue development + 54
Path 2
Term Annotations click to browse term
  biological_process 28578
    developmental process 7019
      anatomical structure development 6408
        tissue development 2135
          muscle tissue development 516
            regulation of muscle tissue development 57
              negative regulation of muscle tissue development + 20
              positive regulation of muscle tissue development + 29
              regulation of smooth muscle tissue development + 0
              regulation of striated muscle tissue development + 54
paths to the root