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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of muscle tissue development
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Accession:GO:1901861 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of muscle tissue development.


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negative regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FGF3 fibroblast growth factor 3 involved_in IMP (PMID:20702560) BHF-UCL PMID:20702560 NCBI chr11:69,809,968...69,819,416
Ensembl chr11:69,809,968...69,819,416
JBrowse link
G FGF8 fibroblast growth factor 8 involved_in IMP (PMID:20702560) BHF-UCL PMID:20702560 NCBI chr10:101,770,109...101,780,369
Ensembl chr10:101,770,109...101,780,371
JBrowse link
negative regulation of muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLCN folliculin involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chr17:17,206,946...17,237,188
Ensembl chr17:17,212,212...17,237,188
JBrowse link
G IGFBP5 insulin like growth factor binding protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:216,672,105...216,695,549
Ensembl chr 2:216,672,105...216,695,549
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRAS NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 1:114,704,469...114,716,771
Ensembl chr 1:114,704,469...114,716,771
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in IDA (PMID:9770491) UniProt PMID:9770491 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link
G TSC22D3 TSC22 domain family member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) MGI PMID:20124407 MGI:4838954 NCBI chr  X:107,713,221...107,777,329
Ensembl chr  X:107,713,221...107,777,342
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) Ensembl
MGI
PMID:7664846 PMID:7958419 GO_REF:0000107 MGI:69156 MGI:76047 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636
JBrowse link
G USP19 ubiquitin specific peptidase 19 involved_in ISS UniProt GO_REF:0000024 NCBI chr 3:49,108,050...49,120,933
Ensembl chr 3:49,108,046...49,120,938
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr11:119,355,215...119,381,690
Ensembl chr11:119,355,215...119,381,711
JBrowse link
G YBX3 Y-box binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3808638|PMID:18676817) Ensembl
MGI
PMID:18676817 GO_REF:0000107 MGI:3808638 NCBI chr12:10,699,084...10,723,442
Ensembl chr12:10,699,089...10,723,323
JBrowse link
negative regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor ISO RGD PMID:16723531 RGD:1580249 NCBI chr11:27,654,893...27,722,030
Ensembl chr11:27,654,893...27,722,058
JBrowse link
G BMP4 bone morphogenetic protein 4 acts_upstream_of_or_within IDA (PMID:14749725) MGI PMID:14749725 NCBI chr14:53,949,736...53,956,891
Ensembl chr14:53,949,736...53,958,761
JBrowse link
G LEF1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3656361|PMID:16936075) Ensembl
MGI
PMID:16936075 GO_REF:0000107 MGI:3656361 NCBI chr 4:108,047,548...108,168,932
Ensembl chr 4:108,047,545...108,168,956
JBrowse link
G LUC7L LUC7 like acts_upstream_of_or_within ISO (MGI:3055693|PMID:15474286) MGI PMID:15474286 MGI:3055693 NCBI chr16:188,969...229,449
Ensembl chr16:188,969...229,463
JBrowse link
G SIRT2 sirtuin 2 involved_in IDA (PMID:12887892) UniProt PMID:12887892 NCBI chr19:38,878,555...38,899,733
Ensembl chr19:38,878,555...38,899,862
JBrowse link
G SOX15 SRY-box transcription factor 15 involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:10821863)
(MGI:1858709|PMID:10821863)
BHF-UCL
MGI
PMID:10821863 MGI:1858709 NCBI chr17:7,588,178...7,590,094
Ensembl chr17:7,588,178...7,590,094
JBrowse link
G TWIST1 twist family bHLH transcription factor 1 involved_in ISO (MGI:1201268|PMID:9520323) UniProt PMID:9520323 MGI:1201268 NCBI chr 7:19,113,047...19,117,636
Ensembl chr 7:19,020,991...19,117,636
JBrowse link
positive regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREB1 cAMP responsive element binding protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5571433|PMID:24364879) Ensembl
MGI
PMID:24364879 GO_REF:0000107 MGI:5571433 NCBI chr 2:207,529,943...207,605,988
Ensembl chr 2:207,529,737...207,605,988
JBrowse link
G ERBB3 erb-b2 receptor tyrosine kinase 3 acts_upstream_of_or_within ISO (MGI:5571433|PMID:24364879) MGI PMID:24364879 MGI:5571433 NCBI chr12:56,080,108...56,103,505
Ensembl chr12:56,076,799...56,103,505
JBrowse link
positive regulation of muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:23,792,021...24,472,905
Ensembl chr 4:23,755,041...23,904,089
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:66,546,395...66,563,334
Ensembl chr11:66,546,395...66,563,334
JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1928555|PMID:11146504) Ensembl
MGI
PMID:11146504 GO_REF:0000107 MGI:1928555 NCBI chr18:63,123,346...63,320,280
Ensembl chr18:63,123,346...63,320,128
JBrowse link
G LMOD3 leiomodin 3 involved_in IMP (PMID:25250574) UniProt PMID:25250574 NCBI chr 3:69,106,065...69,122,595
Ensembl chr 3:69,106,065...69,123,032
JBrowse link
G MYF5 myogenic factor 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:80,716,912...80,719,671
Ensembl chr12:80,716,912...80,719,671
JBrowse link
G MYF6 myogenic factor 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:80,707,634...80,709,474
Ensembl chr12:80,707,634...80,709,474
JBrowse link
G MYOD1 myogenic differentiation 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:17,719,571...17,722,136
Ensembl chr11:17,719,571...17,722,136
JBrowse link
G MYOG myogenin involved_in ISS
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 1:203,083,129...203,086,012
Ensembl chr 1:203,083,129...203,086,012
JBrowse link
G NIBAN2 niban apoptosis regulator 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 9:127,505,339...127,579,031
Ensembl chr 9:127,505,339...127,578,989
JBrowse link
G SHOX2 short stature homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:158,095,905...158,106,420
Ensembl chr 3:158,095,905...158,106,420
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CDON cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3522534|PMID:15572127) Ensembl
MGI
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr11:125,956,813...126,063,335
Ensembl chr11:125,955,796...126,063,335
JBrowse link
G CTNNB1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:41,199,422...41,240,445
Ensembl chr 3:41,194,741...41,260,096
JBrowse link
G FLOT1 flotillin 1 involved_in IMP (PMID:24046456) UniProt PMID:24046456 NCBI chr 6:30,727,709...30,742,847
Ensembl chr 6:30,727,709...30,742,732
JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase involved_in ISO
IEA
RGD
Ensembl
PMID:19388010 GO_REF:0000107 RGD:2317940 NCBI chr 5:75,336,334...75,362,116
Ensembl chr 5:75,336,329...75,364,001
JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in IMP (PMID:9770491) UniProt PMID:9770491 NCBI chr 5:88,717,117...88,904,105
Ensembl chr 5:88,717,117...88,904,257
JBrowse link
G MIR214 microRNA 214 acts_upstream_of_or_within ISO (MGI:4839883|PMID:20534588) MGI PMID:20534588 MGI:4839883 NCBI chr 1:172,138,798...172,138,907
Ensembl chr 1:172,138,798...172,138,907
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5569711|PMID:23926128) Ensembl
MGI
PMID:23926128 GO_REF:0000107 MGI:5569711 NCBI chr 5:40,759,389...40,798,374
Ensembl chr 5:40,759,379...40,798,374
JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1929969|PMID:11171399) Ensembl
MGI
PMID:11171399 GO_REF:0000107 MGI:1929969 NCBI chr 7:155,799,980...155,812,463
Ensembl chr 7:155,799,980...155,812,463
JBrowse link
G USP2 ubiquitin specific peptidase 2 involved_in ISO PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr11:119,355,215...119,381,690
Ensembl chr11:119,355,215...119,381,711
JBrowse link
G WNT3A Wnt family member 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:228,006,998...228,067,113
Ensembl chr 1:228,006,998...228,061,271
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr11:66,546,395...66,563,334
Ensembl chr11:66,546,395...66,563,334
JBrowse link
G ADRB2 adrenoceptor beta 2 ISO RGD PMID:16177600 RGD:1598747 NCBI chr 5:148,826,611...148,828,623
Ensembl chr 5:148,826,611...148,828,623
JBrowse link
G DLL1 delta like canonical Notch ligand 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:170,282,200...170,291,078
Ensembl chr 6:170,282,206...170,306,565
JBrowse link
G IGF2 insulin like growth factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:2,129,117...2,149,566
Ensembl chr11:2,129,112...2,141,238
JBrowse link
G MTM1 myotubularin 1 acts_upstream_of_or_within ISO (MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:5510937 NCBI chr  X:150,562,658...150,673,143
Ensembl chr  X:150,568,621...150,673,143
JBrowse link
G NACA nascent polypeptide associated complex subunit alpha involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr12:56,712,427...56,725,299
Ensembl chr12:56,712,305...56,731,628
JBrowse link
G RPS6KB1 ribosomal protein S6 kinase B1 ISO RGD PMID:16408196 RGD:1643018 NCBI chr17:59,893,121...59,950,574
Ensembl chr17:59,893,046...59,950,574
JBrowse link
positive regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GJA1 gap junction protein alpha 1 acts_upstream_of_or_within ISO (MGI:3513707|PMID:15601660) MGI PMID:15601660 MGI:3513707 NCBI chr 6:121,435,646...121,449,727
Ensembl chr 6:121,435,595...121,449,727
JBrowse link
G MRTFB myocardin related transcription factor B involved_in IDA (PMID:14565952) UniProt PMID:14565952 NCBI chr16:14,071,062...14,266,779
Ensembl chr16:14,071,319...14,266,773
JBrowse link
regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JPH2 junctophilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,106,590...44,187,946
Ensembl chr20:44,106,590...44,187,188
JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACVR1 activin A receptor type 1 involved_in ISO PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 2:157,736,446...157,876,330
Ensembl chr 2:157,736,251...157,876,330
JBrowse link
G MEGF10 multiple EGF like domains 10 involved_in IMP (PMID:22101682) UniProt PMID:22101682 NCBI chr 5:127,229,519...127,461,222
Ensembl chr 5:127,290,796...127,465,737
JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:4879035|PMID:21177349) MGI PMID:21177349 MGI:4879035 NCBI chr10:112,950,247...113,167,678
Ensembl chr10:112,950,247...113,167,678
JBrowse link
G WNT10B Wnt family member 10B involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3581945|PMID:15673614) Ensembl
MGI
PMID:15673614 GO_REF:0000107 MGI:3581945 NCBI chr12:48,965,340...48,979,587
Ensembl chr12:48,965,340...48,971,735
JBrowse link
regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CENPF centromere protein F involved_in
acts_upstream_of_or_within
ISS
ISO
(PMID:10373470)
(MGI:1339480|PMID:10373470)
UniProt
MGI
PMID:10373470 MGI:1339480 NCBI chr 1:214,603,195...214,664,571
Ensembl chr 1:214,603,195...214,664,571
JBrowse link
G LOX lysyl oxidase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5634219|PMID:25715398) Ensembl
MGI
PMID:25715398 GO_REF:0000107 MGI:5634219 NCBI chr 5:122,063,195...122,078,259
Ensembl chr 5:122,063,195...122,078,413
JBrowse link
G MTPN myotrophin involved_in NAS (PMID:12031792) UniProt PMID:12031792 NCBI chr 7:135,926,760...135,977,359
Ensembl chr 7:135,926,760...135,977,359
JBrowse link
G SMAD3 SMAD family member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2153314|PMID:11711431) Ensembl
MGI
PMID:11711431 GO_REF:0000107 MGI:2153314 NCBI chr15:67,065,602...67,195,195
Ensembl chr15:67,063,763...67,195,173
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
(MGI:2153314|PMID:11711431) UniProt
MGI
Ensembl
PMID:11711431 GO_REF:0000024 GO_REF:0000107 MGI:2153314 NCBI chr19:41,330,323...41,353,922
Ensembl chr19:41,301,587...41,353,922
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18666
    developmental process 7387
      regulation of developmental process 2865
        regulation of muscle tissue development 55
          negative regulation of muscle tissue development + 17
          positive regulation of muscle tissue development + 30
          regulation of smooth muscle tissue development + 0
          regulation of striated muscle tissue development + 52
Path 2
Term Annotations click to browse term
  biological_process 18666
    developmental process 7387
      anatomical structure development 6725
        tissue development 2407
          muscle tissue development 501
            regulation of muscle tissue development 55
              negative regulation of muscle tissue development + 17
              positive regulation of muscle tissue development + 30
              regulation of smooth muscle tissue development + 0
              regulation of striated muscle tissue development + 52
paths to the root