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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of muscle tissue development
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Accession:GO:1901861 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of muscle tissue development.


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negative regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf3 fibroblast growth factor 3 involved_in ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:200,001,261...200,005,187
Ensembl chr 1:200,001,261...200,005,187
JBrowse link
G Fgf8 fibroblast growth factor 8 involved_in ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
JBrowse link
negative regulation of muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin involved_in ISO (MGI:5463828|PMID:23150719) RGD PMID:23150719 MGI:5463828 NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 involved_in ISO (MGI:3039207|PMID:15010534) RGD PMID:15010534 MGI:3039207 NCBI chr 9:74,452,371...74,464,953
Ensembl chr 9:74,448,382...74,465,156
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras NRAS proto-oncogene, GTPase acts_upstream_of_or_within ISO MGI:2676890 (MGI:4839883|PMID:20534588) RGD PMID:20534588 MGI:4839883 NCBI chr 2:190,582,885...190,593,509
Ensembl chr 2:190,582,918...190,591,626
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
(PMID:9770491)
GO_REF:0000024
RGD
UniProt
PMID:9770491 GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link
G Tsc22d3 TSC22 domain family, member 3 acts_upstream_of_or_within ISO (MGI:4838954|PMID:20124407) RGD PMID:20124407 MGI:4838954 NCBI chr  X:104,217,898...104,277,935
Ensembl chr  X:104,217,925...104,276,861
JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) RGD PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5315325|PMID:21971047)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21971047 GO_REF:0000024 GO_REF:0000107 MGI:5315325 NCBI chr 8:109,190,727...109,201,761
Ensembl chr 8:109,190,724...109,201,741
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
G Ybx3 Y box binding protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3808638|PMID:18676817)
Ensembl
RGD
PMID:18676817 GO_REF:0000107 MGI:3808638 NCBI chr 4:165,129,747...165,153,101
Ensembl chr 4:165,129,758...165,153,161
JBrowse link
negative regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IMP RGD PMID:16723531 RGD:1580249 NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:14749725)
GO_REF:0000107
RGD
Ensembl
PMID:14749725 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
JBrowse link
G Hdac7 histone deacetylase 7 involved_in TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:128,923,918...128,962,025
Ensembl chr 7:128,923,920...128,962,072
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3656361|PMID:16936075)
Ensembl
RGD
PMID:16936075 GO_REF:0000107 MGI:3656361 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
JBrowse link
G Luc7l LUC7-like acts_upstream_of_or_within ISO (MGI:3055693|PMID:15474286) RGD PMID:15474286 MGI:3055693 NCBI chr10:15,273,340...15,307,131
Ensembl chr10:15,273,348...15,303,112
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO (PMID:12887892) RGD PMID:12887892 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Sox15 SRY-box transcription factor 15 acts_upstream_of_or_within ISO (MGI:1858709|PMID:10821863) RGD PMID:10821863 MGI:1858709 NCBI chr10:54,373,602...54,376,591
Ensembl chr10:54,372,403...54,376,591
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (MGI:1201268|PMID:9520323) RGD PMID:9520323 MGI:1201268 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
JBrowse link
positive regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 acts_upstream_of_or_within ISO (MGI:5571433|PMID:24364879) RGD PMID:24364879 MGI:5571433 NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5571433|PMID:24364879)
Ensembl
RGD
PMID:24364879 GO_REF:0000107 MGI:5571433 NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525
JBrowse link
positive regulation of muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5463828|PMID:23150719) RGD PMID:23150719 MGI:5463828 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857134 (MGI:1928555|PMID:11146504)
Ensembl
RGD
PMID:11146504 GO_REF:0000107 MGI:1928555 NCBI chr13:22,689,783...22,853,920 JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Myf5 myogenic factor 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
JBrowse link
G Myf6 myogenic factor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852
JBrowse link
G Myod1 myogenic differentiation 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
JBrowse link
G Myog myogenin involved_in IBA
ISO
ISS
PMID:21873635
(MGI:62381|PMID:8393145)
GO_REF:0000024
RGD
UniProt
PMID:8393145 PMID:21873635 GO_REF:0000024 MGI:62381, RGD:13792537 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
JBrowse link
G Shox2 short stature homeobox 2 involved_in ISO (MGI:4946446|PMID:21156168) RGD PMID:21156168 MGI:4946446 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:3522534|PMID:15572127)
Ensembl
RGD
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5619733|PMID:23460868)
Ensembl
RGD
PMID:23460868 GO_REF:0000107 MGI:5619733 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
RGD PMID:24046456 MGI:5634880 NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19388010 RGD:2317940 NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA
ISS
(PMID:9770491)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:9770491 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 acts_upstream_of_or_within ISO MGI:3029359 (MGI:5569711|PMID:23926128) RGD PMID:23926128 MGI:5569711 NCBI chr 2:54,240,298...54,275,978
Ensembl chr 2:54,240,137...54,275,978
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857796|MGI:1861186 (MGI:1929969|PMID:11171399)
Ensembl
RGD
PMID:11171399 GO_REF:0000107 MGI:1929969 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Usp2 ubiquitin specific peptidase 2 involved_in IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:44,411,457...44,439,668
Ensembl chr 8:44,411,607...44,438,331
JBrowse link
G Wnt3a Wnt family member 3A involved_in ISO (MGI:2179189|PMID:11856745) RGD PMID:11856745 MGI:2179189 NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) RGD PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Adrb2 adrenoceptor beta 2 IMP RGD PMID:16177600 RGD:1598747 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Dll1 delta like canonical Notch ligand 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5608606|PMID:25220152)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:25220152 GO_REF:0000024 GO_REF:0000107 MGI:5608606 NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:6120647|PMID:29440408)
Ensembl
RGD
PMID:29440408 GO_REF:0000107 MGI:6120647 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:468,862...481,992
Ensembl chr 7:469,723...481,992
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IMP RGD PMID:16408196 RGD:1643018 NCBI chr10:71,323,777...71,367,908
Ensembl chr10:71,323,777...71,367,908
JBrowse link
positive regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2676327 (MGI:3513707|PMID:15601660) RGD PMID:15601660 MGI:3513707 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
JBrowse link
G Mrtfb myocardin related transcription factor B involved_in ISO (PMID:14565952) RGD PMID:14565952 NCBI chr10:1,116,315...1,278,106 JBrowse link
regulation of cardiac muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jph2 junctophilin 2 involved_in ISO (MGI:1861885|PMID:10949023) RGD PMID:10949023 MGI:1861885 NCBI chr 3:151,994,768...152,058,941
Ensembl chr 3:151,994,778...152,058,904
JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in IEP PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
JBrowse link
G Megf10 multiple EGF-like domains 10 involved_in ISO (PMID:22101682) RGD PMID:22101682 NCBI chr18:50,605,231...50,755,441
Ensembl chr18:50,605,656...50,754,456
JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:4881345 (MGI:4879035|PMID:21177349) RGD PMID:21177349 MGI:4879035 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
JBrowse link
regulation of striated muscle tissue development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpf centromere protein F acts_upstream_of_or_within ISO (MGI:1339480|PMID:10373470) RGD PMID:10373470 MGI:1339480 NCBI chr13:101,184,127...101,229,714
Ensembl chr13:101,184,127...101,229,669
JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO MGI:3610732 (MGI:5634219|PMID:25715398) RGD PMID:25715398 MGI:5634219 NCBI chr18:45,964,311...46,041,477
Ensembl chr18:45,967,343...46,041,477
JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO (MGI:2153314|PMID:11711431) RGD PMID:11711431 MGI:2153314 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (MGI:2153314|PMID:11711431) RGD PMID:11711431 MGI:2153314 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    developmental process 6770
      regulation of developmental process 2663
        regulation of muscle tissue development 53
          negative regulation of muscle tissue development + 18
          positive regulation of muscle tissue development + 28
          regulation of smooth muscle tissue development + 0
          regulation of striated muscle tissue development + 50
Path 2
Term Annotations click to browse term
  biological_process 19492
    developmental process 6770
      anatomical structure development 6196
        tissue development 2077
          muscle tissue development 485
            regulation of muscle tissue development 53
              negative regulation of muscle tissue development + 18
              positive regulation of muscle tissue development + 28
              regulation of smooth muscle tissue development + 0
              regulation of striated muscle tissue development + 50
paths to the root