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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of muscle tissue development
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Accession:GO:1901861 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of muscle tissue development.


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negative regulation of cardiac muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf3 fibroblast growth factor 3 ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:218,003,018...218,006,942
Ensembl chr 1:218,003,018...218,006,942
JBrowse link
G Fgf8 fibroblast growth factor 8 ISO (PMID:20702560) RGD PMID:20702560 NCBI chr 1:265,492,949...265,498,965
Ensembl chr 1:265,493,124...265,498,831
JBrowse link
negative regulation of muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin ISO (MGI:5463828|PMID:23150719) RGD PMID:23150719 MGI:5463828 NCBI chr10:46,153,185...46,172,331
Ensembl chr10:46,153,188...46,172,309
JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 ISO (MGI:3039207|PMID:15010534) RGD PMID:15010534 MGI:3039207 NCBI chr 9:80,154,230...80,166,813
Ensembl chr 9:80,150,211...80,167,033
JBrowse link
negative regulation of skeletal muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nras NRAS proto-oncogene, GTPase ISO MGI:2676890 (MGI:4839883|PMID:20534588) RGD PMID:20534588 MGI:4839883 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO
ISS
(PMID:9770491)
GO_REF:0000024
RGD
UniProt
PMID:9770491 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Tsc22d3 TSC22 domain family, member 3 ISO (MGI:4838954|PMID:20124407) RGD PMID:20124407 MGI:4838954 NCBI chr  X:111,884,285...111,944,693
Ensembl chr  X:111,884,295...111,887,906
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (MGI:69156|PMID:7958419), (MGI:76047|PMID:7664846) RGD PMID:7664846 PMID:7958419 MGI:69156 MGI:76047 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
G Usp19 ubiquitin specific peptidase 19 IEA
ISO
ISS
GO_REF:0000107
(MGI:5315325|PMID:21971047)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21971047 GO_REF:0000024 GO_REF:0000107 MGI:5315325 NCBI chr 8:117,280,690...117,291,729
Ensembl chr 8:117,280,705...117,291,351
JBrowse link
G Usp2 ubiquitin specific peptidase 2 IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:48,403,985...48,432,525
Ensembl chr 8:48,406,260...48,430,885
JBrowse link
G Ybx3 Y box binding protein 3 IEA
ISO
GO_REF:0000107
(MGI:3808638|PMID:18676817)
Ensembl
RGD
PMID:18676817 GO_REF:0000107 MGI:3808638 NCBI chr 4:165,606,819...165,630,041
Ensembl chr 4:165,606,819...165,630,118
JBrowse link
negative regulation of striated muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain-derived neurotrophic factor IMP RGD PMID:16723531 RGD:1580249 NCBI chr 3:100,768,637...100,819,216
Ensembl chr 3:100,768,637...100,819,210
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO
IEA
(PMID:14749725)
GO_REF:0000107
RGD
Ensembl
PMID:14749725 GO_REF:0000107 NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
JBrowse link
G Hdac7 histone deacetylase 7 TAS PMID:12711221 UniProt PMID:12711221 RGD:8553516 NCBI chr 7:139,280,396...139,319,108
Ensembl chr 7:139,281,187...139,318,455
JBrowse link
G Lef1 lymphoid enhancer binding factor 1 IEA
ISO
GO_REF:0000107
(MGI:3656361|PMID:16936075)
Ensembl
RGD
PMID:16936075 GO_REF:0000107 MGI:3656361 NCBI chr 2:236,232,115...236,345,061
Ensembl chr 2:236,233,239...236,345,056
JBrowse link
G Luc7l LUC7-like ISO (MGI:3055693|PMID:15474286) RGD PMID:15474286 MGI:3055693 NCBI chr10:15,538,878...15,572,651
Ensembl chr10:15,538,872...15,568,638
JBrowse link
G Sirt2 sirtuin 2 IEA
ISO
GO_REF:0000107
(PMID:12887892)
Ensembl
RGD
PMID:12887892 GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Sox15 SRY-box transcription factor 15 ISO (MGI:1858709|PMID:10821863) RGD PMID:10821863 MGI:1858709 NCBI chr10:56,260,514...56,263,503
Ensembl chr10:56,260,514...56,263,503
JBrowse link
G Twist1 twist family bHLH transcription factor 1 ISO (MGI:1201268|PMID:9520323) RGD PMID:9520323 MGI:1201268 NCBI chr 6:53,401,241...53,403,235
Ensembl chr 6:53,401,109...53,403,214
JBrowse link
positive regulation of cardiac muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Creb1 cAMP responsive element binding protein 1 ISO (MGI:5571433|PMID:24364879) RGD PMID:24364879 MGI:5571433 NCBI chr 9:71,229,753...71,298,994
Ensembl chr 9:71,230,108...71,293,435
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 IEA
ISO
GO_REF:0000107
(MGI:5571433|PMID:24364879)
Ensembl
RGD
PMID:24364879 GO_REF:0000107 MGI:5571433 NCBI chr 7:2,989,202...3,010,610
Ensembl chr 7:2,989,340...3,010,350
JBrowse link
positive regulation of muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppargc1a PPARG coactivator 1 alpha ISO (MGI:5463828|PMID:23150719) RGD PMID:23150719 MGI:5463828 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
positive regulation of skeletal muscle fiber development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Bcl2 BCL2, apoptosis regulator IEA
ISO
GO_REF:0000107
MGI:1857134 (MGI:1928555|PMID:11146504)
Ensembl
RGD
PMID:11146504 GO_REF:0000107 MGI:1928555 NCBI chr13:26,605,426...26,769,374
Ensembl chr13:26,605,426...26,769,374
JBrowse link
G Lmod3 leiomodin 3 ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,604,378...129,619,136
Ensembl chr 4:129,604,267...129,619,142
JBrowse link
G Myf5 myogenic factor 5 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:49,729,533...49,732,974
Ensembl chr 7:49,729,533...49,732,764
JBrowse link
G Myf6 myogenic factor 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:49,739,643...49,741,490
Ensembl chr 7:49,739,646...49,741,540
JBrowse link
G Myod1 myogenic differentiation 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:102,396,538...102,399,248
Ensembl chr 1:102,396,538...102,399,248
JBrowse link
G Myog myogenin ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:62381|PMID:8393145)
UniProt
RGD
PMID:8393145, PMID:21873635 GO_REF:0000024 MGI:62381, RGD:13792537 NCBI chr13:51,126,459...51,129,048
Ensembl chr13:51,126,459...51,129,048
JBrowse link
G Shox2 short stature homeobox 2 ISO (MGI:4946446|PMID:21156168) RGD PMID:21156168 MGI:4946446 NCBI chr 2:164,118,175...164,126,783
Ensembl chr 2:164,118,191...164,126,783
JBrowse link
positive regulation of skeletal muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated IEA
ISO
GO_REF:0000107
MGI:2653120 (MGI:3522534|PMID:15572127)
Ensembl
RGD
PMID:15572127 GO_REF:0000107 MGI:3522534 NCBI chr 8:36,625,757...36,712,091
Ensembl chr 8:36,625,733...36,710,949
JBrowse link
G Ctnnb1 catenin beta 1 IEA
ISO
GO_REF:0000107
(MGI:5619733|PMID:23460868)
Ensembl
RGD
PMID:23460868 GO_REF:0000107 MGI:5619733 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Flot1 flotillin 1 ISO (PMID:24046456)
(MGI:5634880|PMID:24046456)
RGD PMID:24046456 MGI:5634880 NCBI chr20:3,427,890...3,438,418
Ensembl chr20:3,427,880...3,438,396
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IMP RGD PMID:19388010 RGD:2317940 NCBI chr 2:27,480,224...27,500,654
Ensembl chr 2:27,480,226...27,500,654
JBrowse link
G Mef2c myocyte enhancer factor 2C ISO
ISS
(PMID:9770491)
GO_REF:0000024
RGD
UniProt
PMID:9770491 GO_REF:0000024 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO MGI:3029359 (MGI:5569711|PMID:23926128) RGD PMID:23926128 MGI:5569711 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Shh sonic hedgehog signaling molecule IEA
ISO
GO_REF:0000107
MGI:1857796|MGI:1861186 (MGI:1929969|PMID:11171399)
Ensembl
RGD
PMID:11171399 GO_REF:0000107 MGI:1929969 NCBI chr 4:718,538...727,691
Ensembl chr 4:718,538...727,691
JBrowse link
G Usp2 ubiquitin specific peptidase 2 IDA PMID:10938131 UniProt PMID:10938131 RGD:634247 NCBI chr 8:48,403,985...48,432,525
Ensembl chr 8:48,406,260...48,430,885
JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:2179189|PMID:11856745) RGD PMID:11856745 MGI:2179189 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035
JBrowse link
positive regulation of skeletal muscle tissue growth term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) RGD PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
JBrowse link
G Adrb2 adrenoceptor beta 2 IMP RGD PMID:16177600 RGD:1598747 NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
JBrowse link
G Dll1 delta like canonical Notch ligand 1 IEA
ISO
ISS
GO_REF:0000107
(MGI:5608606|PMID:25220152)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25220152 GO_REF:0000024 GO_REF:0000107 MGI:5608606 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Igf2 insulin-like growth factor 2 ISO (MGI:6120647|PMID:29440408) RGD PMID:29440408 MGI:6120647 NCBI chr 1:215,828,102...215,839,081
Ensembl chr 1:215,828,102...215,846,911
JBrowse link
G Mtm1 myotubularin 1 ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:18,821,821...18,840,449
Ensembl chr 6:18,821,815...18,839,409
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:2,458,283...2,470,674
Ensembl chr 7:2,458,264...2,470,674
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IMP RGD PMID:16408196 RGD:1643018 NCBI chr10:73,824,200...73,865,503
Ensembl chr10:73,824,202...73,865,364
JBrowse link
positive regulation of striated muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 ISO MGI:2676327 (MGI:3513707|PMID:15601660) RGD PMID:15601660 MGI:3513707 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Mrtfb myocardin related transcription factor B ISO (PMID:14565952) RGD PMID:14565952 NCBI chr10:1,151,163...1,273,269 JBrowse link
regulation of cardiac muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jph2 junctophilin 2 ISO (MGI:1861885|PMID:10949023) RGD PMID:10949023 MGI:1861885 NCBI chr 3:159,709,998...159,776,536
Ensembl chr 3:159,712,325...159,775,643
JBrowse link
regulation of skeletal muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 IEP PMID:12968668 UniProt PMID:12968668 RGD:8554636 NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
JBrowse link
G Megf10 multiple EGF-like domains 10 ISO (PMID:22101682) RGD PMID:22101682 NCBI chr18:52,215,652...52,366,212
Ensembl chr18:52,215,682...52,366,238
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO MGI:4881345 (MGI:4879035|PMID:21177349) RGD PMID:21177349 MGI:4879035 NCBI chr 1:276,686,911...276,730,517
Ensembl chr 1:276,659,542...276,730,514
Ensembl chr 1:276,659,542...276,730,514
JBrowse link
G Wnt10b Wnt family member 10B ISO MGI:3582610 (MGI:3581945|PMID:15673614) RGD PMID:15673614 MGI:3581945 NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
JBrowse link
regulation of striated muscle tissue development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenpf centromere protein F ISO (MGI:1339480|PMID:10373470) RGD PMID:10373470 MGI:1339480 NCBI chr13:108,132,499...108,178,609
Ensembl chr13:108,132,499...108,178,609
JBrowse link
G Lox lysyl oxidase ISO MGI:3610732 (MGI:5634219|PMID:25715398) RGD PMID:25715398 MGI:5634219 NCBI chr18:47,500,320...47,577,819
Ensembl chr18:47,500,330...47,577,819
JBrowse link
G Smad3 SMAD family member 3 ISO (MGI:2153314|PMID:11711431) RGD PMID:11711431 MGI:2153314 NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO (MGI:2153314|PMID:11711431) RGD PMID:11711431 MGI:2153314 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20030
    developmental process 6828
      regulation of developmental process 2647
        regulation of muscle tissue development 53
          negative regulation of muscle tissue development + 18
          positive regulation of muscle tissue development + 28
          regulation of smooth muscle tissue development + 0
          regulation of striated muscle tissue development + 50
Path 2
Term Annotations click to browse term
  biological_process 20030
    developmental process 6828
      anatomical structure development 6270
        tissue development 2099
          muscle tissue development 478
            regulation of muscle tissue development 53
              negative regulation of muscle tissue development + 18
              positive regulation of muscle tissue development + 28
              regulation of smooth muscle tissue development + 0
              regulation of striated muscle tissue development + 50
paths to the root