Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:positive regulation of signal transduction by p53 class mediator
go back to main search page
Accession:GO:1901798 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of signal transduction by p53 class mediator.
Synonyms:exact_synonym: up-regulation of signal transduction by p53 class mediator;   upregulation of signal transduction by p53 class mediator
 narrow_synonym: activation of signal transduction by p53 class mediator


show annotations for term's descendants           Sort by:
positive regulation of signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:16173922)		 UniProt
Ensembl
RGD		 PMID:16173922 GO_REF:0000024 GO_REF:0000107 NCBI chr10:82,390,845...82,402,814
Ensembl chr10:81,894,393...81,903,590 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:16173922) RGD PMID:16173922 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Chd5 chromodomain helicase DNA binding protein 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17289567)		 UniProt
RGD		 PMID:17289567 GO_REF:0000024 NCBI chr 5:168,130,851...168,181,705
Ensembl chr 5:162,848,394...162,896,291 		JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17593335)		 Ensembl
RGD		 PMID:17593335 GO_REF:0000107 NCBI chr10:55,222,245...55,231,506
Ensembl chr10:54,723,411...54,732,820 		JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in ISO (PMID:22948151) RGD PMID:22948151 NCBI chr10:88,562,889...88,565,001
Ensembl chr10:88,062,803...88,066,189 		JBrowse link
G Pml PML nuclear body scaffold involved_in ISO
IEA		 (PMID:10910364)
GO_REF:0000107		 RGD
Ensembl		 PMID:10910364 GO_REF:0000107 NCBI chr 8:67,523,164...67,557,801
Ensembl chr 8:58,628,837...58,658,971 		JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A involved_in ISO (PMID:14635196) RGD PMID:14635196 NCBI chr 1:105,136,521...105,139,596
Ensembl chr 1:96,000,058...96,003,171 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21804542)		 UniProt
Ensembl
RGD		 PMID:21804542 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:153,557,592...153,561,230
Ensembl chr 5:148,274,069...148,277,599 		JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:83,268,223...83,272,184
Ensembl chr10:82,771,538...82,775,870 		JBrowse link
G Rpl37 ribosomal protein L37 involved_in ISO (PMID:23874713) RGD PMID:23874713 NCBI chr 2:55,942,827...55,944,905
Ensembl chr 2:54,215,469...54,217,442 		JBrowse link
G Rps15 ribosomal protein S15 involved_in ISO
IEA		 (PMID:23874713)
GO_REF:0000107		 RGD
Ensembl		 PMID:23874713 GO_REF:0000107 NCBI chr 7:10,066,572...10,068,167
Ensembl chr 7:9,416,004...9,417,450
Ensembl chr 7:9,416,004...9,417,450 		JBrowse link
G Rps20 ribosomal protein S20 involved_in ISO (PMID:23874713) RGD PMID:23874713 NCBI chr 5:21,616,687...21,618,068
Ensembl chr 5:16,819,304...16,820,475
Ensembl chr 9:16,819,304...16,820,475
Ensembl chr 3:16,819,304...16,820,475
Ensembl chr 5:16,819,304...16,820,475 		JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 involved_in ISO (PMID:17938176) RGD PMID:17938176 NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975 		JBrowse link
positive regulation of DNA damage response, signal transduction by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd1 ankyrin repeat domain 1 involved_in ISO
IEA		 (PMID:20599664)
GO_REF:0000107		 RGD
Ensembl		 PMID:20599664 GO_REF:0000107 NCBI chr 1:243,228,460...243,237,014
Ensembl chr 1:233,815,851...233,834,919 		JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (PMID:9733515) RGD PMID:9733515 NCBI chr 8:62,724,939...62,829,040
Ensembl chr 8:53,831,093...53,932,437 		JBrowse link
G Atr ATR serine/threonine kinase involved_in IEA
ISO		 GO_REF:0000107
(PMID:9733515), (PMID:9925639)		 Ensembl
RGD		 PMID:9733515 PMID:9925639 GO_REF:0000107 NCBI chr 8:105,306,299...105,403,742
Ensembl chr 8:96,426,724...96,524,136 		JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in ISO (PMID:9529249) RGD PMID:9529249 NCBI chr 5:109,100,763...109,114,448
Ensembl chr 5:103,984,949...104,003,149 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO
IEA		 (PMID:15660129)
GO_REF:0000107		 RGD
Ensembl		 PMID:15660129 GO_REF:0000107 NCBI chr10:92,224,393...92,231,928
Ensembl chr10:91,723,508...91,732,283 		JBrowse link
G Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3574590 (PMID:15680327)
GO_REF:0000002		 RGD
InterPro		 PMID:15680327 GO_REF:0000002 NCBI chr17:26,354,247...26,364,953
Ensembl chr17:26,148,633...26,215,720 		JBrowse link
G Hic1 HIC ZBTB transcriptional repressor 1 involved_in ISO (PMID:16269335) RGD PMID:16269335 NCBI chr10:60,512,855...60,517,812
Ensembl chr10:60,011,528...60,019,475 		JBrowse link
G Ing4 inhibitor of growth family, member 4 involved_in ISO
IEA		 (PMID:15251430)
GO_REF:0000107		 RGD
Ensembl		 PMID:15251430 GO_REF:0000107 NCBI chr 4:159,528,183...159,536,762
Ensembl chr 4:157,841,951...157,850,265 		JBrowse link
G Pla2r1 phospholipase A2 receptor 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19197340)		 UniProt
Ensembl
RGD		 PMID:19197340 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:65,292,629...65,422,462
Ensembl chr 3:44,883,943...45,013,660 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:15102863)
(PMID:14500851)		 RGD PMID:14500851 PMID:15102863 NCBI chr18:62,255,970...62,262,384
Ensembl chr18:59,986,017...59,992,429 		JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:54,109,692...54,112,822
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
G Spred1 sprouty-related, EVH1 domain containing 1 involved_in ISO
IEA		 (PMID:20736167)
GO_REF:0000107		 RGD
Ensembl		 PMID:20736167 GO_REF:0000107 NCBI chr 3:124,437,230...124,504,358
Ensembl chr 3:103,983,072...104,049,718 		JBrowse link
G Spred2 sprouty-related, EVH1 domain containing 2 involved_in ISO (PMID:20736167) RGD PMID:20736167 NCBI chr14:98,350,577...98,452,143
Ensembl chr14:94,148,837...94,249,162 		JBrowse link
G Zfp385a zinc finger protein 385A involved_in ISO
IEA		 (PMID:17719541)
GO_REF:0000107		 RGD
Ensembl		 PMID:17719541 GO_REF:0000107 NCBI chr 7:136,327,393...136,354,017
Ensembl chr 7:134,448,921...134,475,548 		JBrowse link
G Znhit1 zinc finger, HIT-type containing 1 involved_in ISO
IEA		 (PMID:17700068)
GO_REF:0000107		 RGD
Ensembl		 PMID:17700068 GO_REF:0000107 NCBI chr12:25,323,292...25,329,566
Ensembl chr12:19,686,148...19,692,880 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif5a eukaryotic translation initiation factor 5A involved_in ISO (PMID:15371445) RGD PMID:15371445 NCBI chr10:55,138,821...55,143,272
Ensembl chr10:54,640,024...54,644,656 		JBrowse link
G Mir186 microRNA 186 acts_upstream_of ISO (PMID:27714074) RGD PMID:27714074 NCBI chr 2:249,241,650...249,241,735
Ensembl chr 2:246,582,806...246,582,891 		JBrowse link
G Msx1 msh homeobox 1 involved_in ISO (PMID:15705871) RGD PMID:15705871 NCBI chr14:77,185,802...77,189,735
Ensembl chr14:72,961,148...72,964,966 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:10962037) RGD PMID:10962037 NCBI chr 7:95,483,105...95,488,031
Ensembl chr 7:93,593,705...93,598,630 		JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO (PMID:17310983) RGD PMID:17310983 NCBI chr 6:50,994,581...50,999,447
Ensembl chr 6:45,223,980...45,271,145
Ensembl chr 5:45,223,980...45,271,145 		JBrowse link
G Sh3glb1 SH3 domain -containing GRB2-like endophilin B1 involved_in ISO (PMID:24523556) RGD PMID:24523556 NCBI chr 2:236,411,194...236,445,225
Ensembl chr 2:233,750,838...233,784,784 		JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:17805299) RGD PMID:17805299 NCBI chr 3:128,620,320...128,724,716
Ensembl chr 3:108,169,980...108,269,822 		JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO
IEA		 (PMID:17571083)
GO_REF:0000107		 RGD
Ensembl		 PMID:17571083 GO_REF:0000107 NCBI chr10:47,746,923...47,748,628
Ensembl chr10:47,245,637...47,249,333 		JBrowse link
positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Knl1 kinetochore scaffold 1 acts_upstream_of_or_within ISO (PMID:31197172) RGD PMID:31197172 NCBI chr 3:126,483,498...126,545,774
Ensembl chr 3:106,029,661...106,091,915 		JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212) RGD PMID:16213212 NCBI chr10:54,109,692...54,112,822
Ensembl chr10:53,610,421...53,613,966 		JBrowse link
G Steap3 STEAP3 metalloreductase acts_upstream_of_or_within ISO MGI:4398911 (PMID:18617898) RGD PMID:18617898 NCBI chr13:33,904,710...33,950,100
Ensembl chr13:31,351,954...31,396,519 		JBrowse link
G Tp73 tumor protein p73 acts_upstream_of_or_within ISO
IEA		 MGI:2442925|MGI:98834 (PMID:15983387)
GO_REF:0000107		 RGD
Ensembl		 PMID:15983387 GO_REF:0000107 NCBI chr 5:169,903,801...169,988,075
Ensembl chr 5:164,621,377...164,681,128 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    cellular process 19550
      signal transduction 7301
        intracellular signal transduction 3189
          signal transduction by p53 class mediator 175
            positive regulation of signal transduction by p53 class mediator 38
              positive regulation of DNA damage response, signal transduction by p53 class mediator 15
              positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator + 12
Path 2
Term Annotations click to browse term
  biological_process 20558
    biological regulation 13833
      regulation of biological process 13394
        signaling 7862
          signal transduction 7301
            intracellular signal transduction 3189
              signal transduction by p53 class mediator 175
                regulation of signal transduction by p53 class mediator 105
                  positive regulation of signal transduction by p53 class mediator 38
                    positive regulation of DNA damage response, signal transduction by p53 class mediator 15
                    positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator + 12
paths to the root