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ONTOLOGY REPORT - ANNOTATIONS


Term:glycosyl compound biosynthetic process
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Accession:GO:1901659 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of glycosyl compound.
Synonyms:exact_synonym: glycosyl compound anabolism;   glycosyl compound biosynthesis;   glycosyl compound formation;   glycosyl compound synthesis



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adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3770326|PMID:16547283) MGI
RGD
Ensembl
PMID:16547283 PMID:30269308 GO_REF:0000107 MGI:3770326 RGD:152995394 NCBI chr 6:83,333,428...83,379,585
Ensembl chr 6:86,615,409...86,661,601
JBrowse link
ascaroside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOX1 acyl-CoA oxidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr17:69,890,817...69,928,342
Ensembl chr17:75,445,923...75,479,571
JBrowse link
inosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3531253|PMID:8663040)
(PMID:8894685)
(MGI:3640719|PMID:10720488)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
MGI
TreeGrafter
Ensembl
PMID:1618849 PMID:2015347 PMID:7592575 PMID:7731963 PMID:8663040 More... GO_REF:0000107 GO_REF:0000118 MGI:1095761 MGI:3531253 MGI:3640719 MGI:3808984 MGI:49990 MGI:72798 MGI:76875 MGI:83255 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G ADA2 adenosine deaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr22:606,220...648,902
Ensembl chr22:16,042,295...16,081,949
JBrowse link
G ADAL adenosine deaminase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:22,291,939...22,315,830
Ensembl chr15:40,451,403...40,468,241
JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chr 9:98,987,348...98,997,252
Ensembl chr 9:127,657,338...127,678,245
JBrowse link
nucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTD dCMP deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:175,079,416...175,106,756
Ensembl chr 4:187,303,591...187,330,527
JBrowse link
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO (PMID:33833118) UniProt PMID:33833118 NCBI chr 6:42,817,392...42,821,257 JBrowse link
G QNG1 Q-nucleotide N-glycosylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,921,349...40,940,380
Ensembl chr 9:83,294,908...83,312,792
JBrowse link
purine ribonucleoside salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3027665|PMID:14736855) MGI
InterPro
UniProt
Ensembl
PMID:14736855 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:3027665 NCBI chr10:70,672,967...71,236,950
Ensembl chr10:73,342,900...73,902,490
JBrowse link
G APRT adenine phosphoribosyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:52624|PMID:8485579) MGI
Ensembl
UniProt
PMID:8485579 GO_REF:0000043 GO_REF:0000107 MGI:52624 NCBI chr16:69,522,628...69,525,138
Ensembl chr16:89,179,020...89,181,504
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1331314|PMID:10037486), (MGI:2675193|PMID:12944494), (MGI:52624|PMID:8485579), (MGI:60112|PMID:8492116)
(MGI:52624|PMID:8485579)
MGI
Ensembl
UniProt
InterPro
PMID:8485579 PMID:8492116 PMID:10037486 PMID:12944494 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:1331314 MGI:2675193 MGI:52624 MGI:60112 NCBI chr  X:123,609,248...123,650,102
Ensembl chr  X:133,916,681...133,948,197
JBrowse link
G MTAP methylthioadenosine phosphorylase involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:21,637,543...21,769,698
Ensembl chr 9:22,266,376...22,382,218
JBrowse link
G PGM2 phosphoglucomutase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 4:32,153,576...32,189,882
Ensembl chr 4:38,008,839...38,045,008
JBrowse link
G PNP purine nucleoside phosphorylase involved_in IEA UniProt GO_REF:0000043 NCBI chr14:1,343,921...1,351,670
Ensembl chr14:19,396,114...19,403,907
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr10:25,023,015...25,127,770
Ensembl chr10:25,393,227...25,497,054
JBrowse link
thymidine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHFR2 dihydrofolate reductase 2 involved_in ISO (PMID:21876188) UniProt PMID:21876188 NCBI chr 3:91,125,295...91,128,378 JBrowse link
G DTYMK deoxythymidylate kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr2B:128,952,009...128,963,640
Ensembl chr2B:247,740,881...247,752,504
JBrowse link
G TK1 thymidine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:72,251,416...72,265,308
Ensembl chr17:77,803,749...77,816,747
JBrowse link
wybutosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDM8 lysine demethylase 8 involved_in IEA TreeGrafter GO_REF:0000118 Ensembl chr16:27,577,230...27,595,164 JBrowse link
G LCMT2 leucine carboxyl methyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr15:22,288,992...22,291,814
Ensembl chr15:40,444,633...40,446,693
JBrowse link
G TYW5 tRNA-yW synthesizing protein 5 involved_in IEA Ensembl
TreeGrafter
GO_REF:0000107 GO_REF:0000118 NCBI chr2B:87,177,858...87,204,411
Ensembl chr2B:205,338,762...205,362,872
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16309
    metabolic process 10175
      organic substance metabolic process 9736
        carbohydrate derivative metabolic process 1025
          carbohydrate derivative biosynthetic process 584
            glycosyl compound biosynthetic process 22
              S-glycoside biosynthetic process + 0
              glycoside biosynthetic process + 1
              nucleoside biosynthetic process + 18
              wybutosine biosynthetic process 3
paths to the root