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ONTOLOGY REPORT - ANNOTATIONS


Term:organic substance catabolic process
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Accession:GO:1901575 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of an organic substance, any molecular entity containing carbon.
Synonyms:exact_synonym: organic molecular entity breakdown;   organic molecular entity catabolic process;   organic molecular entity catabolism;   organic molecular entity degradation;   organic substance breakdown;   organic substance catabolism;   organic substance degradation



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10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect ISO (PMID:19933275), (PMID:21238436) UniProt PMID:19933275 PMID:21238436 NCBI chr 9:35,903,902...35,948,573
Ensembl chr 9:35,904,029...35,948,575
JBrowse link
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 involved_in IEA UniProt
UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,585...53,794,706
JBrowse link
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 involved_in IEA Ensembl
UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 5:79,492,672...79,558,702
Ensembl chr 5:79,492,732...79,558,701
JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHYH phytanoyl-CoA 2-hydroxylase ISO RGD PMID:10588950 RGD:727286 NCBI chr10:48,404,298...48,423,978
Ensembl chr10:48,404,293...48,423,978
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:103,675,164...103,871,245
Ensembl chr14:103,675,175...103,871,227
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:94,298,790...94,350,333
Ensembl chr13:94,298,790...94,350,312
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:142,384,526...142,387,407
Ensembl chr 2:142,384,532...142,387,199
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:28275056)
(PMID:16126846)
CACAO
UniProt
PMID:16126846 PMID:28275056 NCBI chr 2:72,656,951...72,668,854
Ensembl chr 2:72,656,951...72,668,964
JBrowse link
G KLHL17 kelch like family member 17 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:63,320,898...63,328,093
Ensembl chr 6:63,322,184...63,336,139
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:107,738,089...107,763,873
Ensembl chr 4:107,738,112...107,763,596
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:63,328,054...63,336,140
Ensembl chr 6:63,322,314...63,336,140
JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 1:4,732,575...4,883,386
Ensembl chr 1:4,735,513...4,883,768
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chr 7:13,126,518...13,139,504 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:116,204,807...116,292,455
Ensembl chr 9:116,209,094...116,292,366
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:18,762,043...18,835,788
Ensembl chr13:18,761,445...18,830,563
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:58,975,013...59,013,546
Ensembl chr 2:58,975,015...59,013,495
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 6:93,541,334...93,551,200
Ensembl chr 6:93,541,334...93,551,195
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr 1:16,463,532...16,498,974
Ensembl chr 1:16,465,252...16,498,971
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:92,490,069...92,495,864
Ensembl chr 7:92,490,011...92,495,574
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:97,200,395...97,203,094
Ensembl chr 3:97,200,406...97,204,700
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGEL2 angel homolog 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 9:130,453,912...130,476,383
Ensembl chr 9:130,453,920...130,474,921
JBrowse link
G BOLL boule homolog, RNA binding protein involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr15:101,535,392...101,602,232
Ensembl chr15:101,535,703...101,602,233
JBrowse link
G DAZL deleted in azoospermia like involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:3,762,896...3,783,848
Ensembl chr13:3,764,784...3,782,818
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:71,207,141...71,245,863
Ensembl chr 2:71,207,124...71,248,916
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:161,784,146...161,928,953
Ensembl chr 6:161,786,352...161,928,910
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chr 2:139,779,865...139,783,016
Ensembl chr 2:139,779,867...139,783,159
JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) UniProt PMID:16010978 NCBI chr 7:77,921,098...77,978,550
Ensembl chr 7:77,921,141...77,969,914
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:67,314,651...67,365,060
Ensembl chr 9:67,314,484...67,365,061
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:22,976,951...22,979,568
Ensembl chr13:22,964,071...22,983,109
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr 2:77,551,562...77,563,153
Ensembl chr 2:77,551,563...77,563,107
JBrowse link
G RBM10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367529|PMID:19508861) Ensembl
Ensembl
MGI
PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:41,773,232...41,803,656
Ensembl chr  X:41,773,232...41,803,662
JBrowse link
G RBM38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chr17:57,783,156...57,802,495
Ensembl chr17:57,783,154...57,797,997
JBrowse link
G TARDBP TAR DNA binding protein involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:71,213,584...71,227,707
Ensembl chr 6:71,213,852...71,227,704
JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:53,374,559...53,394,172
Ensembl chr 9:53,375,642...53,394,165
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:48,063,732...48,066,235
Ensembl chr 6:48,052,137...48,066,257
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:108,958,812...108,986,373
Ensembl chr14:108,959,134...108,986,726
JBrowse link
5-methylcytosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET1 tet methylcytosine dioxygenase 1 involved_in IEA UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr14:71,675,671...71,812,732
Ensembl chr14:71,675,671...71,815,621
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 involved_in IEA UniProt
UniProt
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 8:116,413,253...116,546,976
Ensembl chr 8:116,415,267...116,545,299
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 involved_in IEA UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 3:68,918,896...69,020,406
Ensembl chr 3:68,918,933...69,020,986
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2137102|PMID:11415433) Ensembl
Ensembl
MGI
PMID:11415433 GO_REF:0000107 MGI:2137102 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
acetylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACHE acetylcholinesterase involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:21873635)
(MGI:3654414|PMID:16434405), (MGI:65815|PMID:7512968)
Ensembl
GO_Central
Ensembl
GO_Central
MGI
RGD
PMID:126256 PMID:334962 PMID:1133098 PMID:2731551 PMID:3655326 More... GO_REF:0000107 MGI:3654414 MGI:65815 RGD:1580870 RGD:2301187 RGD:2301195 RGD:2301197 RGD:2301199 RGD:2301203 RGD:2301204 RGD:2301205 RGD:2301207 RGD:2301213 NCBI chr 3:8,732,451...8,738,274
Ensembl chr 3:8,732,324...8,739,149
JBrowse link
G BCHE butyrylcholinesterase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:104,946,732...105,007,568 JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACR acrosin ISO RGD PMID:28859281 RGD:13464336 NCBI chr 5:30,127...36,005
Ensembl chr 5:30,127...36,005
JBrowse link
acylglycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD12 abhydrolase domain containing 12, lysophospholipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,997,477...31,056,307
Ensembl chr17:30,997,480...31,056,312
JBrowse link
G ABHD2 abhydrolase domain containing 2, acylglycerol lipase involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 7:54,655,694...54,776,140
Ensembl chr 7:54,655,726...54,837,484
JBrowse link
G ABHD6 abhydrolase domain containing 6, acylglycerol lipase involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:39,982,536...40,055,467
Ensembl chr13:40,009,737...40,055,490
JBrowse link
G CES1 carboxylesterase 1 involved_in ISO (MGI:5318031|PMID:15220344) UniProt PMID:15220344 MGI:5318031 NCBI chr 6:29,884,249...29,913,330 JBrowse link
G LYPLA2 lysophospholipase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:81,601,492...81,605,914
Ensembl chr 6:81,601,437...81,730,657
JBrowse link
G MGLL monoglyceride lipase involved_in ISO (PMID:22969151)
(MGI:5616317|PMID:18096503)
(MGI:4836780|PMID:20729846)
UniProt PMID:18096503 PMID:20729846 PMID:22969151 MGI:4836780 MGI:5616317 NCBI chr13:72,480,395...72,568,964
Ensembl chr13:72,479,337...72,568,962
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:21873635)
(PMID:8894685)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
(MGI:1861066|PMID:10899903), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377)
(MGI:2151677|PMID:11591798), (MGI:3531253|PMID:8663040)
(MGI:74163|PMID:7670465)
Ensembl
GO_Central
Ensembl
MGI
GO_Central
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 More... GO_REF:0000107 MGI:1095761 MGI:1861066 MGI:2151677 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:49990 MGI:59127 MGI:72798 MGI:74163 MGI:76875 MGI:83255 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G ADA2 adenosine deaminase 2 involved_in IBA
IEA
ISS
(PMID:21873635) GO_Central
Ensembl
InterPro
UniProt
GO_Central
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:69,526,413...69,554,640
Ensembl chr 5:69,526,434...69,554,661
JBrowse link
G ADAL adenosine deaminase like involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:128,089,422...128,125,691
Ensembl chr 1:128,089,500...128,125,967
JBrowse link
G UOX urate oxidase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,247,176...129,375,724
JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr 2:49,026,695...49,084,982
Ensembl chr 2:49,028,923...49,083,590
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO (MGI:3760051|PMID:17502665) MGI PMID:17502665 MGI:3760051 NCBI chr14:107,263,546...107,390,923
Ensembl chr14:107,263,449...107,506,052
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
G NUDT9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chr 8:131,436,245...131,472,984 JBrowse link
aflatoxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSTA1 glutathione S-transferase alpha 1 acts_upstream_of_or_within ISO (MGI:4429761|PMID:19850059) MGI PMID:19850059 MGI:4429761 NCBI chr 7:46,538,743...46,550,781
Ensembl chr 7:46,538,032...46,567,728
JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 ISO RGD PMID:27071940 RGD:12910550 NCBI chr15:82,967,485...83,146,185
Ensembl chr15:82,973,648...83,146,183
JBrowse link
alcohol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1346361|PMID:10514444) Ensembl
Ensembl
MGI
PMID:10514444 GO_REF:0000107 MGI:1346361 NCBI chr 8:121,225,485...121,259,262
NCBI chr  X:98,582,002...98,583,002
Ensembl chr 8:121,225,656...121,261,747
JBrowse link
aldehyde catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588122|PMID:15769935) InterPro
InterPro
Ensembl
MGI
Ensembl
PMID:15769935 GO_REF:0000002 GO_REF:0000107 MGI:3588122 NCBI chr 6:165,811,245...165,825,168
Ensembl chr 6:165,811,246...165,824,896
JBrowse link
G ALDH2 aldehyde dehydrogenase 2 family member involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr14:39,902,317...39,933,113
Ensembl chr14:39,896,565...39,933,124
JBrowse link
G ALDH3B1 aldehyde dehydrogenase 3 family member B1 acts_upstream_of_or_within ISO (PMID:20699116) MGI PMID:20699116 NCBI chr 2:4,868,561...4,889,179 JBrowse link
alkaloid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:6,539,021...6,543,643
Ensembl chr 5:6,538,907...6,543,643
JBrowse link
G CYP3A22 cytochrome P450 family 3 subfamily A member 22 involved_in ISO (PMID:15039299) BHF-UCL PMID:15039299 NCBI chr 3:6,617,256...6,665,179
Ensembl chr 3:6,615,343...6,822,817
JBrowse link
amino-acid betaine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 2:87,911,093...87,935,252
Ensembl chr 2:87,866,607...87,935,253
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr 2:49,026,695...49,084,982
Ensembl chr 2:49,028,923...49,083,590
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:95,473,259...95,497,645
Ensembl chr 6:95,473,261...95,497,000
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3770326|PMID:16547283)
GO_Central
Ensembl
GO_Central
MGI
RGD
PMID:16547283 PMID:21414400 PMID:21873635 GO_REF:0000107 MGI:3770326 RGD:5134346 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
G UOX urate oxidase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,247,176...129,375,724
JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANAPC1 anaphase promoting complex subunit 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 3:44,483,961...44,605,035
Ensembl chr 3:44,509,692...44,605,014
JBrowse link
G ANAPC10 anaphase promoting complex subunit 10 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 8:83,353,217...83,497,570 JBrowse link
G ANAPC11 anaphase promoting complex subunit 11 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:1,095,091...1,099,233 JBrowse link
G ANAPC4 anaphase promoting complex subunit 4 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr 8:19,301,253...19,341,463
Ensembl chr 8:19,301,248...19,341,478
JBrowse link
G ANAPC5 anaphase promoting complex subunit 5 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:31,259,695...31,306,434
Ensembl chr14:31,259,727...31,306,442
JBrowse link
G ANAPC7 anaphase promoting complex subunit 7 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:31,744,729...31,789,750
Ensembl chr14:31,742,649...31,789,743
JBrowse link
G CDC16 cell division cycle 16 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr11:79,084,243...79,111,758
Ensembl chr11:79,084,176...79,115,331
JBrowse link
G CDC20 cell division cycle 20 involved_in IBA
IMP
IEA
(PMID:21873635)
(PMID:18753608)
GO_Central
GO_Central
AgBase
Ensembl
AgBase
PMID:18753608 PMID:21873635 GO_REF:0000107 NCBI chr 6:167,886,266...167,890,587
Ensembl chr 6:167,886,270...167,890,583
JBrowse link
G CDC23 cell division cycle 23 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:140,211,334...140,245,728
Ensembl chr 2:140,211,336...140,230,793
JBrowse link
G CDC26 cell division cycle 26 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 1:253,893,666...253,906,659
Ensembl chr 1:253,895,885...253,906,632
JBrowse link
G CDC27 cell division cycle 27 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr12:16,810,868...16,882,271
Ensembl chr12:16,810,910...16,882,269
JBrowse link
G CUL3 cullin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10500095) MGI
Ensembl
Ensembl
PMID:10500095 GO_REF:0000107 NCBI chr15:126,191,605...126,287,148
Ensembl chr15:126,189,851...126,287,037
JBrowse link
G ECRG4 ECRG4 augurin precursor involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:4454240|PMID:20404145)
GO_Central
Ensembl
GO_Central
MGI
PMID:20404145 PMID:21873635 GO_REF:0000107 MGI:4454240 NCBI chr 3:48,960,413...48,971,878
Ensembl chr 3:48,960,416...48,971,511
JBrowse link
G FBXO31 F-box protein 31 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:1,949,254...1,995,459
Ensembl chr 6:1,949,254...1,995,464
JBrowse link
G FZR1 fizzy and cell division cycle 20 related 1 involved_in IMP
IEA
IBA
(PMID:18753608)
(PMID:21873635)
AgBase
Ensembl
AgBase
GO_Central
GO_Central
PMID:18753608 PMID:21873635 GO_REF:0000107 NCBI chr 2:75,122,599...75,164,134
Ensembl chr 2:75,118,832...75,146,837
JBrowse link
G UBE2C ubiquitin conjugating enzyme E2 C involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:48,018,403...48,021,542
Ensembl chr17:48,018,400...48,021,534
JBrowse link
G UBE2S ubiquitin conjugating enzyme E2 S involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:59,565,001...59,570,484
Ensembl chr 6:59,565,030...59,570,490
JBrowse link
androgen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:120,596,235...120,627,806
Ensembl chr 1:120,367,667...120,695,899
JBrowse link
G CYP19A2 cytochrome P450 19A2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:120,652,172...120,695,899
Ensembl chr 1:120,367,667...120,695,899
JBrowse link
G CYP19A3 cytochrome P450 19A3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:120,476,890...120,556,103
Ensembl chr 1:120,367,667...120,695,899
JBrowse link
G HSD17B13 hydroxysteroid 17-beta dehydrogenase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:131,555,517...131,570,067
Ensembl chr 8:131,472,576...131,569,993
JBrowse link
G LOC100520923 estradiol 17-beta-dehydrogenase 11 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:131,472,582...131,541,113
Ensembl chr 8:131,472,576...131,569,993
JBrowse link
G SPP1 secreted phosphoprotein 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:131,077,786...131,085,334
Ensembl chr 8:131,077,786...131,085,340
JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:2339109 RGD:70289 NCBI chr16:75,309,830...75,335,438 JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 6:70,725,403...70,736,264
Ensembl chr 6:70,724,587...70,736,236
JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:21873635)
(PMID:15572351)
InterPro
GO_Central
Ensembl
InterPro
MGI
RGD
GO_Central
PMID:11425895 PMID:15572351 PMID:21873635 GO_REF:0000002 GO_REF:0000107 RGD:628524 NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,863...65,323,816
JBrowse link
G DICER1 dicer 1, ribonuclease III involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:116,361,630...116,436,471
Ensembl chr 7:116,361,630...116,436,519
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:2385551|PMID:12050166)
GO_Central
GO_Central
Ensembl
MGI
PMID:12050166 PMID:21873635 GO_REF:0000107 MGI:2385551 NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,954,804...39,975,946
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
JBrowse link
G ENDOG endonuclease G involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3029597|PMID:14663139)
GO_Central
GO_Central
Ensembl
MGI
PMID:14663139 PMID:21873635 GO_REF:0000107 MGI:3029597 NCBI chr 1:269,153,955...269,157,789
Ensembl chr 1:269,154,090...269,157,788
JBrowse link
G EXOG exo/endonuclease G involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:23,278,458...23,330,540
Ensembl chr13:23,278,932...23,322,541
JBrowse link
G FOXL2 forkhead box L2 involved_in IEA
ISS
Ensembl
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr13:79,708,693...79,709,825
Ensembl chr13:79,709,013...79,709,825
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA InterPro
Ensembl
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:130,485,305...130,617,534
Ensembl chr 4:130,483,878...130,617,531
JBrowse link
G DDAH2 dimethylarginine dimethylaminohydrolase 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 7:23,838,993...23,842,514
Ensembl chr 7:23,838,993...23,842,516
JBrowse link
G FAH fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1929783|PMID:11209059) Ensembl
Ensembl
MGI
PMID:11209059 GO_REF:0000107 MGI:1929783 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,983...49,105,598
JBrowse link
G NOS1 nitric oxide synthase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:35,112,898...35,299,297
Ensembl chr14:35,113,184...35,295,972
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,944...44,327,111
JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,156...6,228,938
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:133,808,193...133,830,517 JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,038...32,028,986
JBrowse link
G ARG2 arginase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,987...91,385,911
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:133,808,193...133,830,517 JBrowse link
aromatic amino acid family catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TAT tyrosine aminotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,587...14,583,177
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
PMID:12753071
GO_Central
Ensembl
GO_Central
MGI
Ensembl
PMID:12753071 PMID:21873635 GO_REF:0000107 RGD:1299508 NCBI chr 2:9,328,260...9,353,384
Ensembl chr 2:9,328,269...9,353,340
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,390,493...76,417,301
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chr 7:97,360,583...97,381,885
Ensembl chr 7:97,357,952...97,381,841
JBrowse link
beta-glucoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA glucosylceramidase beta ISO RGD PMID:3932339 RGD:12791012 NCBI chr 4:94,583,905...94,606,689
Ensembl chr 4:94,584,196...94,609,745
JBrowse link
G GBA3 glucosylceramidase beta 3 involved_in ISO (PMID:11784319) UniProt PMID:11784319 NCBI chr 8:16,897,275...17,012,886
Ensembl chr 8:16,897,317...17,137,315
JBrowse link
bradykinin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACE angiotensin I converting enzyme (peptidyl-dipeptidase A) 1 ISO RGD PMID:2172462 PMID:11299220 RGD:7401264 RGD:8142366 NCBI chr12:15,394,487...15,414,609
Ensembl chr12:15,394,487...15,414,639
JBrowse link
G CPN1 carboxypeptidase N subunit 1 ISO RGD PMID:11299220 RGD:7401264 NCBI chr14:111,182,790...111,213,378
Ensembl chr14:111,182,793...111,225,685
JBrowse link
G CTSH cathepsin H involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:48,084,882...48,106,072
Ensembl chr 7:48,083,569...48,106,041
JBrowse link
G ECE1 endothelin converting enzyme 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:79,408,322...79,465,827
Ensembl chr 6:79,408,328...79,466,106
JBrowse link
G IDE insulin degrading enzyme involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:103,992,035...104,106,571
Ensembl chr14:103,992,037...104,106,576
JBrowse link
G XPNPEP1 X-prolyl aminopeptidase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:120,316,578...120,367,995
Ensembl chr14:120,315,910...120,367,780
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) MGI PMID:14755340 MGI:3027291 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,300...48,925,976
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within
ISO
IEA
(MGI:3027291|PMID:14755340) RGD
Ensembl
MGI
PMID:11733007 PMID:14755340 GO_REF:0000107 MGI:3027291 RGD:1582175 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,681...54,143,602
JBrowse link
G BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 6:49,381,995...49,398,745 JBrowse link
G BCKDHB branched chain keto acid dehydrogenase E1 subunit beta involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:85,755,819...86,017,661
Ensembl chr 1:85,715,203...86,017,600
JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,352...17,402,204
JBrowse link
G DBT dihydrolipoamide branched chain transacylase E2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:117,884,657...117,924,006
Ensembl chr 4:117,875,002...117,937,561
JBrowse link
G DLD dihydrolipoamide dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583
JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr18:44,985,410...45,102,171
Ensembl chr18:44,985,425...45,208,347
JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000043 NCBI chr15:94,795,744...94,941,362
Ensembl chr15:94,785,453...94,941,381
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chr 1:130,896,488...130,910,582
Ensembl chr 1:130,893,983...130,940,350
JBrowse link
G SLC25A44 solute carrier family 25 member 44 involved_in IEA InterPro
Ensembl
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:93,837,004...93,857,154
Ensembl chr 4:93,810,504...93,857,158
JBrowse link
G TMEM91 transmembrane protein 91 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 6:49,366,073...49,372,419 JBrowse link
brexanolone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSD17B6 hydroxysteroid 17-beta dehydrogenase 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:22,089,496...22,114,319
Ensembl chr 5:22,092,578...22,155,917
JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:3968063 PMID:21873635 RGD:2317678 NCBI chr14:40,642,810...40,656,922
Ensembl chr14:40,624,213...40,659,928
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT19 nudix hydrolase 19 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:42,574,064...42,583,473
Ensembl chr 6:42,574,071...42,583,934
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
calcitonin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ECE1 endothelin converting enzyme 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:79,408,322...79,465,827
Ensembl chr 6:79,408,328...79,466,106
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE4A phosphodiesterase 4A involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 2:69,225,403...69,268,327
Ensembl chr 2:69,225,395...69,267,971
JBrowse link
G PDE4B phosphodiesterase 4B involved_in IEA UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 NCBI chr 6:146,167,262...146,720,105
Ensembl chr 6:146,166,681...146,720,127
JBrowse link
G PDE4C phosphodiesterase 4C involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 2:59,567,644...59,598,398 JBrowse link
G PDE4D phosphodiesterase 4D involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr16:37,897,300...39,406,534
Ensembl chr16:37,897,300...39,154,586
JBrowse link
G PDE8A phosphodiesterase 8A involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 7:52,410,766...52,558,482
Ensembl chr 7:52,410,779...52,556,884
JBrowse link
G PDE8B phosphodiesterase 8B involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 2:86,007,190...86,323,796 JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENO1 enolase 1 involved_in ISO PMID:15041191
(PMID:3529090)
(PMID:29775581)
CAFA
UniProt
PMID:3529090 PMID:15041191 PMID:29775581 RGD:2302788 NCBI chr 6:69,385,879...69,401,664
Ensembl chr 6:69,385,882...69,401,117
JBrowse link
G ENO2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr 5:63,799,927...63,809,067
Ensembl chr 5:63,799,339...63,836,688
JBrowse link
G FOXK1 forkhead box K1 involved_in
acts_upstream_of
IEA
ISO
(PMID:30700909) Ensembl
Ensembl
UniProt
PMID:30700909 GO_REF:0000107 NCBI chr 3:3,556,139...3,621,150
Ensembl chr 3:3,556,007...3,621,142
JBrowse link
G FOXK2 forkhead box K2 involved_in
acts_upstream_of
IEA
ISO
(MGI:6281052|PMID:30700909) Ensembl
Ensembl
UniProt
PMID:30700909 GO_REF:0000107 MGI:6281052 NCBI chr12:560,848...615,646
Ensembl chr12:562,074...615,747
JBrowse link
G PFKL phosphofructokinase, liver type involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:207,167,287...207,191,688
Ensembl chr13:207,167,372...207,191,690
JBrowse link
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:21873635)
(MGI:4356361|PMID:19696889)
Ensembl
GO_Central
Ensembl
MGI
GO_Central
PMID:19696889 PMID:21873635 GO_REF:0000107 MGI:4356361 NCBI chr 5:78,475,473...78,525,052
Ensembl chr 5:78,475,540...78,526,995
JBrowse link
G PFKP phosphofructokinase, platelet involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr10:67,022,652...67,082,336
Ensembl chr10:67,022,652...67,082,451
JBrowse link
carbohydrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMY2 amylase, alpha 2B (pancreatic) involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 4:115,172,036...115,209,749 JBrowse link
G DERA deoxyribose-phosphate aldolase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:56,590,982...56,706,479
Ensembl chr 5:56,590,978...56,706,458
JBrowse link
G ENOSF1 enolase superfamily member 1 involved_in IEA
IBA
(PMID:21873635) InterPro
InterPro
GO_Central
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 6:105,613,211...105,642,533
Ensembl chr 6:105,613,273...105,645,113
JBrowse link
G NAGA alpha-N-acetylgalactosaminidase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:6,580,141...6,587,550
Ensembl chr 5:6,571,037...6,590,546
JBrowse link
carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON1 paraoxonase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:74,943,646...74,974,720
Ensembl chr 9:74,926,048...74,974,724
JBrowse link
G PON3 paraoxonase 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:74,983,040...75,017,947
Ensembl chr 9:74,991,277...75,017,942
JBrowse link
carnitine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO (MGI:1321427|PMID:9861014) BHF-UCL PMID:9861014 MGI:1321427 NCBI chr15:112,935,631...112,969,381
Ensembl chr15:112,933,498...112,969,578
JBrowse link
carotene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCO1 beta-carotene oxygenase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:7,008,330...7,054,089
Ensembl chr 6:7,012,613...7,105,271
JBrowse link
G BCO2 beta-carotene oxygenase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 9:39,864,136...39,916,491
Ensembl chr 9:39,864,114...39,927,801
JBrowse link
catecholamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase involved_in IBA
ISS
IEA
(PMID:21873635) GO_Central
UniProt
Ensembl
GO_Central
UniProt
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr14:51,384,729...51,403,997
Ensembl chr14:51,385,133...51,403,998
JBrowse link
cell wall macromolecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100523177 lysozyme g-like protein 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 3:55,017,788...55,029,381
Ensembl chr 3:55,017,572...55,032,344
JBrowse link
cellular amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOSF1 enolase superfamily member 1 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 6:105,613,211...105,642,533
Ensembl chr 6:105,613,273...105,645,113
JBrowse link
G ETFA electron transfer flavoprotein subunit alpha involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:56,450,508...56,540,275
Ensembl chr 7:56,440,620...56,540,253
JBrowse link
G ETFB electron transfer flavoprotein subunit beta involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:58,501,892...58,517,580
Ensembl chr 6:58,501,808...58,517,580
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,401...54,946,202
JBrowse link
cellular carbohydrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOSF1 enolase superfamily member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:105,613,211...105,642,533
Ensembl chr 6:105,613,273...105,645,113
JBrowse link
cellular lipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO (MGI:1321427|PMID:9861014) BHF-UCL PMID:9861014 MGI:1321427 NCBI chr15:112,935,631...112,969,381
Ensembl chr15:112,933,498...112,969,578
JBrowse link
G LRP1 LDL receptor related protein 1 ISO RGD PMID:26506094 RGD:11251109 NCBI chr 5:22,435,636...22,519,276 JBrowse link
G MT3 metallothionein 3 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:18,634,735...18,636,134
Ensembl chr 6:18,634,721...18,789,137
JBrowse link
G PNPLA2 patatin like phospholipase domain containing 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5763710|PMID:26427354) MGI
Ensembl
PMID:26427354 GO_REF:0000107 MGI:5763710 NCBI chr 2:513,065...517,962
Ensembl chr 2:513,076...518,187
JBrowse link
G SAA3 serum amyloid A-3 protein involved_in IMP (PMID:21701568) AgBase
AgBase
PMID:21701568 NCBI chr 2:41,021,349...41,025,950
Ensembl chr 2:40,904,116...41,025,952
JBrowse link
G SIRT2 sirtuin 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:47,682,427...47,703,408
Ensembl chr 6:47,682,424...47,703,529
JBrowse link
cellular macromolecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLN6 CLN6 transmembrane ER protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3656423|PMID:15647513) Ensembl
Ensembl
MGI
PMID:15647513 GO_REF:0000107 MGI:3656423 NCBI chr 1:166,107,895...166,126,054
Ensembl chr 1:166,107,228...166,126,584
JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3656423|PMID:15647513) MGI
Ensembl
PMID:15647513 GO_REF:0000107 MGI:3656423 NCBI chr15:33,282,524...33,325,598
Ensembl chr15:33,271,079...33,305,632
JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3656423|PMID:15647513) MGI
Ensembl
PMID:15647513 GO_REF:0000107 MGI:3656423 NCBI chr 6:95,840,906...95,860,858
Ensembl chr 6:95,840,905...95,860,837
JBrowse link
cellular modified amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GGACT gamma-glutamylamine cyclotransferase involved_in IEA UniProt
UniProt
GO_REF:0000104 NCBI chr11:69,287,685...69,349,540 JBrowse link
cellular oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBA3 glucosylceramidase beta 3 involved_in ISO (PMID:26193330) CAFA PMID:26193330 NCBI chr 8:16,897,275...17,012,886
Ensembl chr 8:16,897,317...17,137,315
JBrowse link
G NEU2 neuraminidase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:133,392,559...133,479,406
Ensembl chr15:133,473,477...133,476,109
JBrowse link
cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHEK2 checkpoint kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:45,699,833...45,967,350
Ensembl chr14:45,926,613...45,967,296
JBrowse link
G CLN8 CLN8 transmembrane ER and ERGIC protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53233|PMID:8389815) Ensembl
Ensembl
MGI
PMID:8389815 GO_REF:0000107 MGI:53233 NCBI chr15:33,282,524...33,325,598
Ensembl chr15:33,271,079...33,305,632
JBrowse link
G DAB2IP DAB2 interacting protein involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:261,732,280...261,859,833
Ensembl chr 1:261,659,660...261,859,830
JBrowse link
G DENND3 DENN domain containing 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:2,530,640...2,578,104
Ensembl chr 4:2,530,644...2,578,099
JBrowse link
G HTRA2 HtrA serine peptidase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:68,516,666...68,520,025
Ensembl chr 3:68,516,500...68,519,886
JBrowse link
G IDE insulin degrading enzyme involved_in ISO
IEA
degradation of oxidized proteins in liver peroxisomes RGD
Ensembl
PMID:11235899 GO_REF:0000107 RGD:1627575 NCBI chr14:103,992,035...104,106,571
Ensembl chr14:103,992,037...104,106,576
JBrowse link
G LOC106504240 melanoma-associated antigen 10-like involved_in ISO (PMID:20864041) UniProt PMID:20864041 NCBI chr  X:121,763,484...121,765,954 JBrowse link
G PPT1 palmitoyl-protein thioesterase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3612221|PMID:16368712) Ensembl
Ensembl
MGI
PMID:16368712 GO_REF:0000107 MGI:3612221 NCBI chr 6:95,840,906...95,860,858
Ensembl chr 6:95,840,905...95,860,837
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G RAB12 RAB12, member RAS oncogene family involved_in ISO (MGI:5448516|PMID:21718402) UniProt PMID:21718402 MGI:5448516 NCBI chr 6:99,216,225...99,244,627
Ensembl chr 6:99,216,228...99,244,868
JBrowse link
G RIPK1 receptor interacting serine/threonine kinase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:1,841,143...1,880,705
Ensembl chr 7:1,841,236...1,880,699
JBrowse link
G RNF5 ring finger protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,215,493...24,217,983
Ensembl chr 7:24,215,703...24,217,972
JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12952940) MGI
Ensembl
PMID:12952940 GO_REF:0000107 NCBI chr13:90,951,798...90,971,538
Ensembl chr13:90,949,021...90,971,411
JBrowse link
G UBE2G2 ubiquitin conjugating enzyme E2 G2 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:21628527) MGI
Ensembl
PMID:21628527 GO_REF:0000107 NCBI chr13:207,444,529...207,471,826
Ensembl chr13:207,444,532...207,471,796
JBrowse link
G UBE4B ubiquitination factor E4B acts_upstream_of_or_within ISO (MGI:3610695|PMID:16314518) MGI PMID:16314518 MGI:3610695 NCBI chr 6:70,345,789...70,462,434
Ensembl chr 6:70,345,813...70,462,434
JBrowse link
ceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACER1 alkaline ceramidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2670497|PMID:12783875) Ensembl
Ensembl
MGI
PMID:12783875 GO_REF:0000107 MGI:2670497 NCBI chr 2:72,704,603...72,767,474
Ensembl chr 2:72,743,875...72,769,570
JBrowse link
G ACER2 alkaline ceramidase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:203,387,669...203,415,018
Ensembl chr 1:203,386,821...203,415,027
JBrowse link
G ACER3 alkaline ceramidase 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:10,985,078...11,167,386
Ensembl chr 9:10,951,561...11,165,493
JBrowse link
G ASAH1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:5,712,048...5,749,811
Ensembl chr17:5,712,056...5,758,830
JBrowse link
G ASAH2 N-acylsphingosine amidohydrolase 2 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
Ensembl
InterPro
Ensembl
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr14:99,018,111...99,141,374
Ensembl chr14:99,025,005...99,129,100
JBrowse link
G CEL carboxyl ester lipase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2158596|PMID:11733511) Ensembl
Ensembl
MGI
PMID:11733511 GO_REF:0000107 MGI:2158596 NCBI chr 1:272,763,203...272,770,259
Ensembl chr 1:272,763,226...272,770,255
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr15:87,619,049...87,965,068
Ensembl chr15:87,440,916...87,964,202
JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISS
IEA
IBA
(PMID:21873635) UniProt
Ensembl
GO_Central
UniProt
GO_Central
Ensembl
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:7,136,637...7,227,966
Ensembl chr 9:7,136,644...7,227,964
JBrowse link
G PDE5A phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:2450821 NCBI chr 8:104,270,858...104,420,955
Ensembl chr 8:104,270,881...104,420,947
JBrowse link
G PDE9A phosphodiesterase 9A involved_in IEA
IBA
(PMID:21873635) Ensembl
Ensembl
GO_Central
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:205,938,342...206,034,981
Ensembl chr13:205,938,334...206,034,981
JBrowse link
chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATG5 autophagy related 5 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 1:72,343,950...72,520,402
Ensembl chr 1:72,270,799...72,520,453
JBrowse link
G ATG7 autophagy related 7 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr13:67,301,756...67,699,141
Ensembl chr13:67,417,938...67,707,660
JBrowse link
G BAG3 BAG cochaperone 3 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr14:129,510,240...129,533,998
Ensembl chr14:129,510,293...129,533,996
JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within
ISO PMID:18644871 ParkinsonsUK-UCL
MGI
PMID:18644871 RGD:10412301 NCBI chr 9:49,982,278...49,986,760
Ensembl chr 9:49,982,284...49,990,508
JBrowse link
G LAMP2 lysosomal associated membrane protein 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3813419|PMID:18579532) MGI
Ensembl
PMID:18579532 GO_REF:0000107 MGI:3813419 NCBI chr  X:98,586,718...98,623,939
Ensembl chr  X:98,582,059...98,623,908
JBrowse link
G STUB1 STIP1 homology and U-box containing protein 1 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 3:41,092,514...41,095,181
Ensembl chr 3:41,092,447...41,095,136
JBrowse link
G SYNPO2 synaptopodin 2 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chr 8:104,677,580...104,844,169
Ensembl chr 8:104,677,580...104,873,791
JBrowse link
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHI3L1 chitinase 3 like 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:113,885,541...113,895,033
Ensembl chr 9:113,885,542...113,895,510
JBrowse link
G CHI3L2 chitinase 3 like 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:109,081,543...109,099,172
Ensembl chr 4:109,081,437...109,099,098
JBrowse link
G CHIA chitinase acidic involved_in ISO
IBA
IEA
(PMID:21873635) RGD
GO_Central
Ensembl
UniProt
GO_Central
PMID:11085997 PMID:21873635 GO_REF:0000107 GO_REF:0000117 RGD:5000759 NCBI chr 4:109,035,323...109,046,499
Ensembl chr 4:109,035,326...109,046,499
JBrowse link
G CHIT1 chitinase 1 involved_in IEA
IBA
(PMID:21873635) UniProt
UniProt
GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 GO_REF:0000117 NCBI chr 9:113,927,715...113,941,445
Ensembl chr 9:113,927,716...113,941,433
JBrowse link
G CTBS chitobiase involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
UniProt
GO_Central
RGD
PMID:2751306 PMID:21873635 GO_REF:0000117 RGD:2301430 NCBI chr 6:129,173,399...129,207,868
Ensembl chr 6:129,173,444...129,207,863
JBrowse link
G OVGP1 oviductal glycoprotein 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:108,929,034...108,941,040
Ensembl chr 4:108,917,549...108,941,042
JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1D1 aldo-keto reductase family 1 member D1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:11,416,065...11,532,846
Ensembl chr18:11,416,068...11,532,728
JBrowse link
G APOE apolipoprotein E involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:1314982|PMID:9826706)
GO_Central
Ensembl
GO_Central
MGI
PMID:9826706 PMID:21873635 GO_REF:0000107 MGI:1314982 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,259...51,377,794
JBrowse link
G CEL carboxyl ester lipase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:272,763,203...272,770,259
Ensembl chr 1:272,763,226...272,770,255
JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:120,809,886...120,852,196
Ensembl chr15:120,809,959...120,852,193
JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1859119|PMID:10748047) Ensembl
Ensembl
MGI
PMID:10748047 GO_REF:0000107 MGI:1859119 NCBI chr 7:41,345,011...41,425,854
Ensembl chr 7:41,344,804...41,426,343
JBrowse link
G CYP46A1 cytochrome P450 family 46 subfamily A member 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:120,658,781...120,695,031
Ensembl chr 7:120,661,111...120,695,019
JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in
acts_upstream_of_or_within
IEA
ISS
ISO
(MGI:1933035|PMID:11279518), (MGI:3603484|PMID:15845870) Ensembl
UniProt
Ensembl
InterPro
MGI
InterPro
PMID:11279518 PMID:15845870 GO_REF:0000002 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 MGI:1933035 MGI:3603484 NCBI chr 4:74,343,101...74,372,628
Ensembl chr 4:74,342,856...74,372,638
JBrowse link
G LOC100738724 24-hydroxycholesterol 7-alpha-hydroxylase-like involved_in IEA Ensembl GO_REF:0000107
G MT3 metallothionein 3 involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr 6:18,634,735...18,636,134
Ensembl chr 6:18,634,721...18,789,137
JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1934548|PMID:11278646)
(MGI:3690692|PMID:10559220)
Ensembl
Ensembl
MGI
PMID:10559220 PMID:11278646 GO_REF:0000107 MGI:1934548 MGI:3690692 NCBI chr14:28,301,421...28,393,568
Ensembl chr14:28,301,294...28,393,565
JBrowse link
G STX1B syntaxin 1B ISO RGD PMID:16081591 RGD:1599972 NCBI chr 3:17,439,563...17,459,517
Ensembl chr 3:17,439,581...17,459,516
JBrowse link
choline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DMGDH dimethylglycine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:87,791,827...87,867,189
Ensembl chr 2:87,678,811...87,866,856
JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HYAL4 hyaluronidase 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5490850|PMID:23086929) Ensembl
Ensembl
MGI
PMID:23086929 GO_REF:0000107 MGI:5490850 NCBI chr18:23,623,379...23,662,528
Ensembl chr18:23,624,226...23,722,045
JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,458...120,712,462
JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:32,791,152...32,879,489
Ensembl chr 4:32,789,460...32,879,489
JBrowse link
G NT5C3A 5'-nucleotidase, cytosolic IIIA involved_in ISO (MGI:5504568|PMID:22925580) MGI PMID:22925580 MGI:5504568 NCBI chr18:40,440,890...40,483,043
Ensembl chr18:40,441,102...40,483,376
JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,226...49,565,100
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
G UPP2 uridine phosphorylase 2 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr15:65,088,652...65,131,739
Ensembl chr15:65,088,284...65,131,789
JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUBN cubilin ISO RGD PMID:14576052 RGD:8554807 NCBI chr10:43,102,931...43,414,692
Ensembl chr10:43,102,946...43,414,613
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT19 nudix hydrolase 19 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:42,574,064...42,583,473
Ensembl chr 6:42,574,071...42,583,934
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:2137102|PMID:11415433)
GO_Central
Ensembl
GO_Central
MGI
Ensembl
PMID:11415433 PMID:21873635 GO_REF:0000107 MGI:2137102 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
coumarin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON3 paraoxonase 3 ISO RGD PMID:12946270 RGD:1303961 NCBI chr 9:74,983,040...75,017,947
Ensembl chr 9:74,991,277...75,017,942
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSDE1 cold shock domain containing E1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:105,804,512...105,845,735
Ensembl chr 4:105,804,586...105,845,725
JBrowse link
G DHX9 DExH-box helicase 9 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:124,141,929...124,183,838
Ensembl chr 9:124,093,667...124,185,352
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:135,844,492...135,862,633
Ensembl chr 8:135,844,487...135,862,633
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr10:17,475,266...17,497,060
Ensembl chr10:17,475,270...17,497,130
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:25,196,955...25,244,660
Ensembl chr12:25,196,969...25,243,272
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:36,137,644...36,228,075
Ensembl chr 4:36,137,639...36,227,690
JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr16:28,098,580...28,134,296
Ensembl chr16:28,098,579...28,134,275
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:54,563,112...54,598,408
Ensembl chr 1:54,563,113...54,598,407
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chr 6:168,716,782...168,736,475
Ensembl chr 6:168,716,789...168,736,604
JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:110,827,833...110,877,972
Ensembl chr14:110,827,914...110,882,575
JBrowse link
CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:45,046,040...45,075,973
Ensembl chr11:45,044,508...45,075,910
JBrowse link
G EXOSC10 exosome component 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,258,988...71,282,802
Ensembl chr 6:71,258,996...71,282,434
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in IEA UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr12:20,758,081...20,765,655
Ensembl chr12:20,758,081...20,776,868
JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA Ensembl
GOC
Ensembl
GOC
GO_REF:0000107 GO_REF:0000108 NCBI chr 5:62,777,236...62,787,342
Ensembl chr 5:62,777,352...62,787,483
JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IEA GOC
GOC
GO_REF:0000108 NCBI chr 5:62,811,819...62,820,532
Ensembl chr 5:62,810,879...62,820,173
JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 involved_in IEA GOC
GOC
GO_REF:0000108 NCBI chr 7:36,364,258...36,381,012
Ensembl chr 7:36,364,300...36,384,299
JBrowse link
G CDA cytidine deaminase involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
InterPro
Ensembl
GO_Central
RGD
PMID:675715 PMID:21873635 GO_REF:0000002 GO_REF:0000107 RGD:2316616 NCBI chr 6:78,824,248...78,849,154
Ensembl chr 6:78,824,284...78,879,462
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:18,467,508...18,518,137
Ensembl chr11:18,458,299...18,518,146
JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RNF126 ring finger protein 126 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:77,673,302...77,683,312
Ensembl chr 2:77,673,353...77,683,301
JBrowse link
cytosolic lipolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BSCL2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO (MGI:5752114|PMID:24622797) MGI PMID:24622797 MGI:5752114 NCBI chr 2:9,052,676...9,064,890
Ensembl chr 2:9,052,070...9,064,888
JBrowse link
G CES1 carboxylesterase 1 acts_upstream_of_or_within ISO (MGI:6306193|PMID:30862682) MGI PMID:30862682 MGI:6306193 NCBI chr 6:29,884,249...29,913,330 JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,929,215...41,950,633
JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA
IBA
IDA
(PMID:21873635)
(PMID:2572224)
UniProt
GO_Central
UniProt
PMID:2572224 PMID:21873635 GO_REF:0000117 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,929,215...41,950,633
JBrowse link
G DDO D-aspartate oxidase involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
Ensembl
UniProt
PMID:21873635 GO_REF:0000107 GO_REF:0000117 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,390,493...76,417,301
JBrowse link
G METTL24 methyltransferase like 24 involved_in IEA UniProt
Ensembl
GO_REF:0000107 GO_REF:0000117 NCBI chr 1:76,243,969...76,367,789
Ensembl chr 1:76,219,492...76,367,782
JBrowse link
D-gluconate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDNK IDNK gluconokinase involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr10:31,329,716...31,341,025
Ensembl chr10:31,329,714...31,340,875
JBrowse link
G PGD phosphogluconate dehydrogenase involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 6:70,675,751...70,692,697
Ensembl chr 6:70,675,815...70,692,679
JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
(MGI:3588122|PMID:15769935) UniProt
Ensembl
UniProt
MGI
Ensembl
PMID:15769935 GO_REF:0000024 GO_REF:0000107 MGI:3588122 NCBI chr 6:165,811,245...165,825,168
Ensembl chr 6:165,811,246...165,824,896
JBrowse link
D-ribose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT5 nudix hydrolase 5 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr10:59,765,444...59,787,773
Ensembl chr10:59,765,703...59,790,159
JBrowse link
G RBKS ribokinase involved_in IEA UniProt
UniProt
GO_REF:0000041 GO_REF:0000104 NCBI chr 3:111,328,758...111,426,173
Ensembl chr 3:111,328,750...111,426,909
JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAO D-amino acid oxidase involved_in IEA
IBA
(PMID:21873635) Ensembl
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr14:41,931,549...41,950,628
Ensembl chr14:41,929,215...41,950,633
JBrowse link
D-xylose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHDH dihydrodiol dehydrogenase acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:55366|PMID:6753830)
(PMID:21873635)
MGI
GO_Central
PMID:6753830 PMID:21873635 MGI:55366 NCBI chr 6:54,210,693...54,217,250
Ensembl chr 6:54,187,260...54,228,144
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:95,473,259...95,497,645
Ensembl chr 6:95,473,261...95,497,000
JBrowse link
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,446,997
JBrowse link
G UOX urate oxidase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,247,176...129,375,724
JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964)
(MGI:74163|PMID:7670465)
(MGI:76875|PMID:7592575)
(MGI:72798|PMID:7731963)
Ensembl
Ensembl
MGI
PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 GO_REF:0000107 MGI:2155238 MGI:3619310 MGI:72798 MGI:74163 MGI:76875 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA
ISS
Ensembl
Ensembl
AgBase
GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,112,978...40,171,895
JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,458...120,712,462
JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:32,791,152...32,879,489
Ensembl chr 4:32,789,460...32,879,489
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,226...49,565,100
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:73237|PMID:7744869) MGI PMID:7744869 MGI:73237 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
G UPP2 uridine phosphorylase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:65,088,652...65,131,739
Ensembl chr15:65,088,284...65,131,789
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in IEA UniProt
Ensembl
UniProt
GO_REF:0000104 GO_REF:0000107 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G DCP1A decapping mRNA 1A involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,392,510...35,479,703
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
JBrowse link
G DCP2 decapping mRNA 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 2:116,736,800...116,804,693
Ensembl chr 2:116,726,243...116,804,648
JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA
IBA
(PMID:21873635) InterPro
InterPro
GO_Central
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 9:53,400,750...53,437,161
Ensembl chr 9:53,400,753...53,437,548
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr15:48,348,653...48,360,004
Ensembl chr15:48,347,864...48,385,464
JBrowse link
G NOCT nocturnin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr 8:87,885,411...87,909,231
Ensembl chr 8:87,885,412...87,909,655
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr11:5,487,019...5,614,458
Ensembl chr11:5,486,889...5,614,454
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in IEA
IBA
(PMID:21873635) InterPro
InterPro
GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:11,826,816...11,857,699
Ensembl chr 2:11,827,799...11,857,699
JBrowse link
G SPG11 SPG11 vesicle trafficking associated, spatacsin involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 1:126,890,464...126,998,014
Ensembl chr 1:126,890,892...126,998,059
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP1A decapping mRNA 1A involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:35,392,592...35,455,639
Ensembl chr13:35,392,510...35,479,703
JBrowse link
G DCP1B decapping mRNA 1B involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:68,922,086...68,976,280
Ensembl chr 5:68,923,903...68,975,957
JBrowse link
G EDC3 enhancer of mRNA decapping 3 involved_in IEA
IBA
(PMID:21873635) InterPro
InterPro
GO_Central
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:58,828,693...58,895,475
Ensembl chr 7:58,828,726...58,897,923
JBrowse link
G EDC4 enhancer of mRNA decapping 4 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 6:28,489,427...28,501,511
Ensembl chr 6:28,489,422...28,501,512
JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:74163|PMID:7670465)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:76875|PMID:7592575)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488)
Ensembl
Ensembl
MGI
PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 More... GO_REF:0000107 MGI:1095761 MGI:2155238 MGI:3619310 MGI:3640719 MGI:72798 MGI:74163 MGI:76875 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,446,997
JBrowse link
G UOX urate oxidase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,247,176...129,375,724
JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:225,425,389...225,589,835
Ensembl chr 1:225,402,117...225,589,830
JBrowse link
G UOX urate oxidase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,247,176...129,375,724
JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:78,426,838...78,447,029
Ensembl chr 7:78,424,740...78,446,997
JBrowse link
G UOX urate oxidase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,247,176...129,375,724
JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:56,590,982...56,706,479
Ensembl chr 5:56,590,978...56,706,458
JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 7:38,263,819...38,267,361
Ensembl chr 7:38,263,820...38,266,695
JBrowse link
deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase involved_in IEA UniProt
UniProt
GO_REF:0000104 NCBI chr17:32,458,351...32,474,827
Ensembl chr17:32,455,459...32,474,786
JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 5:56,590,982...56,706,479
Ensembl chr 5:56,590,978...56,706,458
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:1353788|PMID:10681516) MGI
Ensembl
InterPro
PMID:10681516 GO_REF:0000002 GO_REF:0000107 MGI:1353788 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr12:60,979,496...60,994,577
Ensembl chr12:60,979,499...60,994,582
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,112,978...40,171,895
JBrowse link
deoxyribose phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 5:56,590,982...56,706,479
Ensembl chr 5:56,590,978...56,706,458
JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IDUA alpha-L-iduronidase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4414887|PMID:19751987)
(MGI:4397742|PMID:19834056)
MGI
Ensembl
Ensembl
PMID:19751987 PMID:19834056 GO_REF:0000107 MGI:4397742 MGI:4414887 NCBI chr 8:334,604...351,970
Ensembl chr 8:334,599...351,970
JBrowse link
dextrin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MGAM maltase-glucoamylase involved_in ISO (PMID:18036614) UniProt PMID:18036614 NCBI chr18:7,871,529...7,997,137
Ensembl chr18:7,871,532...7,970,169
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:6,378,987...6,381,712
Ensembl chr14:6,377,815...6,381,596
JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO PMID:17234634 MGI PMID:17234634 RGD:8553712 NCBI chr 7:38,263,819...38,267,361
Ensembl chr 7:38,263,820...38,266,695
JBrowse link
G GDA guanine deaminase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:225,425,389...225,589,835
Ensembl chr 1:225,402,117...225,589,830
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:95,473,259...95,497,645
Ensembl chr 6:95,473,261...95,497,000
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407) MGI PMID:5560407 MGI:6478530 NCBI chr14:114,062,451...114,167,460
Ensembl chr14:114,062,457...114,168,204
JBrowse link
G UOX urate oxidase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:129,343,632...129,374,833
Ensembl chr 6:129,247,176...129,375,724
JBrowse link
G URAD ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:5,353,524...5,363,481 JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in IEA
IBA
(PMID:21873635) Ensembl
Ensembl
GO_Central
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr11:19,572,963...19,584,565
Ensembl chr11:19,572,644...19,584,538
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IBA
IEA
ISS
(PMID:21873635) GO_Central
Ensembl
AgBase
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr17:40,117,348...40,171,935
Ensembl chr17:40,112,978...40,171,895
JBrowse link
diacylglycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA2 apolipoprotein A2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:89,237,514...89,239,126
Ensembl chr 4:89,237,511...89,240,320
JBrowse link
G DAGLA diacylglycerol lipase alpha involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:9,802,011...9,863,808
Ensembl chr 2:9,802,012...9,863,865
JBrowse link
G LIPE lipase E, hormone sensitive type involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2158903|PMID:11717312)
(MGI:3654969|PMID:16804080)
UniProt
UniProt
MGI
PMID:11717312 PMID:16804080 GO_REF:0000024 MGI:2158903 MGI:3654969 NCBI chr 6:49,543,671...49,560,126
Ensembl chr 6:49,540,907...49,560,126
JBrowse link
G PLB1 phospholipase B1 involved_in ISO PMID:9442064 UniProt PMID:9442064 RGD:30309923 NCBI chr 3:110,605,923...110,741,236
Ensembl chr 3:110,605,921...110,741,130
JBrowse link
diadenosine hexaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
diadenosine pentaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
diadenosine triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FHIT fragile histidine triad diadenosine triphosphatase involved_in IEA
IBA
ISO
(PMID:21873635) Ensembl
Ensembl
GO_Central
RGD
GO_Central
PMID:16359767 PMID:21873635 GO_REF:0000107 RGD:2289929 NCBI chr13:41,443,963...42,884,799
Ensembl chr13:41,443,965...42,228,680
JBrowse link
dibenzo-p-dioxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO 2,3,7,8-tetrachlorodibenzo-p-dioxin RGD PMID:12914780 PMID:15812643 RGD:2306662 RGD:2306673 NCBI chr 7:58,802,887...58,809,155
Ensembl chr 7:58,780,105...58,809,755
JBrowse link
dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT8 acyl-CoA thioesterase 8 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:48,039,627...48,054,335
Ensembl chr17:48,039,628...48,054,335
JBrowse link
G LOC100158115 acyl-coenzyme A thioesterase 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:96,941,065...96,945,834
Ensembl chr 7:96,868,157...96,949,358
JBrowse link
G LOC110255331 acyl-coenzyme A thioesterase 1-like involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:96,868,109...96,873,604
Ensembl chr 7:96,868,157...96,949,358
JBrowse link
diphosphoinositol polyphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT3 nudix hydrolase 3 involved_in ISO (PMID:10585413) UniProt PMID:10585413 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 acts_upstream_of_or_within ISO (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chr13:1,125,180...1,128,036
Ensembl chr13:1,122,541...1,128,041
JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFB DNA fragmentation factor subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:65,310,868...65,323,816
Ensembl chr 6:65,310,863...65,323,816
JBrowse link
G DNASE1 deoxyribonuclease 1 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 3:38,590,045...38,646,852
Ensembl chr 3:38,586,600...38,646,834
JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IEA
IBA
(PMID:21873635) InterPro
InterPro
GO_Central
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr  X:124,931,410...124,937,569
Ensembl chr  X:124,931,408...124,939,965
JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within ISO (MGI:5308183|PMID:21307874) MGI PMID:21307874 MGI:5308183 NCBI chr 3:39,757,725...39,761,497 JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,954,804...39,975,946
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3521632|PMID:15568025) MGI
Ensembl
PMID:15568025 GO_REF:0000107 MGI:3521632 NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4848004|PMID:20871604)
(MGI:5637600|PMID:25848017)
(MGI:3834787|PMID:18724932), (MGI:4414715|PMID:19923437), (MGI:5562498|PMID:23993650)
MGI
Ensembl
PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 GO_REF:0000107 MGI:3834787 MGI:4414715 MGI:4848004 MGI:5562498 MGI:5637600 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,178,601...31,180,592
JBrowse link
DNA catabolic process, endonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 7:78,451,845...78,454,938
Ensembl chr 7:78,451,851...78,454,938
JBrowse link
G DNASE1 deoxyribonuclease 1 involved_in ISS
IBA
IEA
(PMID:29191910)
(PMID:21873635)
UniProt
GO_Central
UniProt
Ensembl
GO_Central
PMID:21873635 PMID:29191910 GO_REF:0000107 NCBI chr 3:38,590,045...38,646,852
Ensembl chr 3:38,586,600...38,646,834
JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr  X:124,931,410...124,937,569
Ensembl chr  X:124,931,408...124,939,965
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:39,958,384...39,976,114
Ensembl chr13:39,954,804...39,975,946
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3818215|PMID:18991290) MGI
Ensembl
PMID:18991290 GO_REF:0000107 MGI:3818215 NCBI chr 2:66,150,071...66,152,857
Ensembl chr 2:66,149,862...66,152,855
JBrowse link
G FBH1 F-box DNA helicase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23361013) MGI
Ensembl
Ensembl
PMID:23361013 GO_REF:0000107 NCBI chr10:65,060,714...65,108,975
Ensembl chr10:64,955,189...65,108,380
JBrowse link
G LOC100514009 histone-lysine N-methyltransferase SETMAR involved_in ISO (PMID:20521842), (PMID:21491884)
(PMID:24573677)
UniProt PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr13:60,914,412...60,933,064 JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23361013) MGI
Ensembl
InterPro
Ensembl
InterPro
PMID:23361013 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:6,462,825...6,470,780
Ensembl chr 2:6,463,413...6,469,112
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:273,011,736...273,021,956
Ensembl chr 1:273,011,733...273,021,940
JBrowse link
DNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISG20 interferon stimulated exonuclease gene 20 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:191,155,853...191,195,601
Ensembl chr 1:191,183,374...191,195,475
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:273,011,736...273,021,956
Ensembl chr 1:273,011,733...273,021,940
JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,178,601...31,180,592
JBrowse link
G XRN2 5'-3' exoribonuclease 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:29,107,641...29,193,500
Ensembl chr17:29,107,668...29,193,494
JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:71,550,405...71,607,067
Ensembl chr14:71,549,815...71,651,089
JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IEA UniProt
UniProt
Ensembl
GO_REF:0000104 GO_REF:0000107 NCBI chr 2:9,752,004...9,756,863
Ensembl chr 2:9,752,751...9,753,893
JBrowse link
G RNASEH1 ribonuclease H1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 3:131,268,908...131,277,072 JBrowse link
G RNASEH2A ribonuclease H2 subunit A involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 2:66,192,785...66,208,417
Ensembl chr 2:66,193,192...66,208,478
JBrowse link
dopamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COMT catechol-O-methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2386819|PMID:9520487) Ensembl
Ensembl
MGI
PMID:9520487 GO_REF:0000107 MGI:2386819 NCBI chr14:51,384,729...51,403,997
Ensembl chr14:51,385,133...51,403,998
JBrowse link
G DBH dopamine beta-hydroxylase involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:1332340|PMID:10051631)
GO_Central
Ensembl
GO_Central
MGI
PMID:10051631 PMID:21873635 GO_REF:0000107 MGI:1332340 NCBI chr 1:273,204,407...273,225,562
Ensembl chr 1:273,204,400...273,225,558
JBrowse link
G LOC100511166 DBH-like monooxygenase protein 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr18:7,742,254...7,751,098 JBrowse link
G MAOA monoamine oxidase A acts_upstream_of_or_within ISO (MGI:2386819|PMID:9520487) MGI PMID:9520487 MGI:2386819 NCBI chr  X:38,930,452...39,006,220 JBrowse link
G MOXD1 monooxygenase DBH like 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:31,282,491...31,367,589
Ensembl chr 1:31,282,506...31,369,408
JBrowse link
G SLC6A3 solute carrier family 6 member 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2386819|PMID:9520487) Ensembl
Ensembl
MGI
PMID:9520487 GO_REF:0000107 MGI:2386819 NCBI chr16:79,186,114...79,220,302
Ensembl chr16:79,186,108...79,220,297
JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:2183137|PMID:12077348) MGI PMID:12077348 MGI:2183137 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chr 3:17,896,426...17,900,562
Ensembl chr 3:17,886,895...17,900,563
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,458...120,712,462
JBrowse link
G DPYS dihydropyrimidinase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:32,791,152...32,879,489
Ensembl chr 4:32,789,460...32,879,489
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:6,162,420...6,164,143
Ensembl chr12:6,139,439...6,164,142
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2388903|PMID:12234672) Ensembl
Ensembl
MGI
PMID:12234672 GO_REF:0000107 MGI:2388903 NCBI chr12:60,979,496...60,994,577
Ensembl chr12:60,979,499...60,994,582
JBrowse link
G UPB1 beta-ureidopropionase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,226...49,565,100
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:6478539|PMID:14154460) MGI PMID:14154460 MGI:6478539 NCBI chr18:48,418,385...48,440,414
Ensembl chr18:48,418,385...48,440,736
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
InterPro
UniProt
GO_Central
RGD
UniProt
PMID:1315924 PMID:3032103 PMID:21873635 GO_REF:0000002 GO_REF:0000104 RGD:2300191 RGD:2301218 NCBI chr 1:123,451,207...123,462,267
Ensembl chr 1:123,451,212...123,462,232
JBrowse link
elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELA1 chymotrypsin like elastase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5641427|PMID:24793170) Ensembl
Ensembl
MGI
PMID:24793170 GO_REF:0000107 MGI:5641427
G CTSL cathepsin L involved_in ISO (MGI:6259330|PMID:12417635) UniProt PMID:12417635 MGI:6259330 NCBI chr10:27,668,523...27,674,705
Ensembl chr10:27,668,264...27,674,618
JBrowse link
G CTSV cathepsin V involved_in ISS UniProt
UniProt
GO_REF:0000024 NCBI chr10:25,202,360...25,208,058
Ensembl chr10:25,202,388...25,209,235
JBrowse link
G MMP12 matrix metallopeptidase 12 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:33,473,625...33,483,630
Ensembl chr 9:33,473,085...33,483,679
JBrowse link
epidermal growth factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RAB7A RAB7A, member RAS oncogene family involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:71,777,422...71,886,758
Ensembl chr13:71,777,420...71,886,581
JBrowse link
G SNX5 sorting nexin 5 ISO RGD PMID:16487940 RGD:13508623 NCBI chr17:26,352,945...26,381,677 JBrowse link
ER-associated misfolded protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AUP1 AUP1 lipid droplet regulating VLDL assembly factor involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:68,520,048...68,523,076
Ensembl chr 3:68,519,969...68,523,076
JBrowse link
G BAG6 BAG cochaperone 6 involved_in ISS
IEA
UniProt
UniProt
Ensembl
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr 7:23,756,897...23,768,659
Ensembl chr 7:23,756,897...23,775,893
JBrowse link
G DERL1 derlin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:16,310,407...16,341,405
Ensembl chr 4:16,310,364...16,346,745
JBrowse link
G LIMK2 LIM domain kinase 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr14:47,946,370...47,979,702
Ensembl chr14:47,946,396...48,040,822
JBrowse link
G NGLY1 N-glycanase 1 ISO RGD PMID:32259258 RGD:39457703 NCBI chr13:12,616,564...12,683,637
Ensembl chr13:12,616,567...12,685,823
JBrowse link
G RNF5 ring finger protein 5 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 7:24,215,493...24,217,983
Ensembl chr 7:24,215,703...24,217,972
JBrowse link
G SDF2L1 stromal cell derived factor 2 like 1 acts_upstream_of_or_within ISO PMID:23444373 MGI PMID:23444373 RGD:8554667 NCBI chr14:50,249,607...50,251,636 JBrowse link
G TOR1A torsin family 1 member A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:269,975,919...269,985,478
Ensembl chr 1:269,974,892...269,985,508
JBrowse link
G UFD1 ubiquitin recognition factor in ER associated degradation 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
Ensembl
GO_Central
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr14:51,113,858...51,132,820
Ensembl chr14:51,113,713...51,133,072
JBrowse link
G UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr15:59,141,582...59,265,053
Ensembl chr15:59,141,588...59,265,047
JBrowse link
G UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr11:65,307,208...65,476,791
Ensembl chr11:65,307,150...65,477,490
JBrowse link
G VCP valosin containing protein involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,796,446...235,876,321
JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRSK2 BR serine/threonine kinase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:896,720...953,908
Ensembl chr 2:896,336...953,985
JBrowse link
G CCDC47 coiled-coil domain containing 47 involved_in IEA InterPro
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr12:15,165,268...15,186,141
Ensembl chr12:15,165,405...15,204,719
JBrowse link
G DERL1 derlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:16,310,407...16,341,405
Ensembl chr 4:16,310,364...16,346,745
JBrowse link
G DNAJB12 DnaJ heat shock protein family (Hsp40) member B12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:75,169,076...75,190,109
Ensembl chr14:75,169,082...75,329,718
JBrowse link
G LIMK2 LIM domain kinase 2 involved_in ISO (PMID:24019521) ParkinsonsUK-UCL PMID:24019521 NCBI chr14:47,946,370...47,979,702
Ensembl chr14:47,946,396...48,040,822
JBrowse link
G RCN3 reticulocalbin 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:54,599,347...54,611,275
Ensembl chr 6:54,599,719...54,611,266
JBrowse link
G RHBDD1 rhomboid domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:128,346,315...128,499,151
Ensembl chr15:128,346,373...128,469,213
JBrowse link
G RNF139 ring finger protein 139 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:15,157,571...15,182,520
Ensembl chr 4:15,154,331...15,263,306
JBrowse link
G RNF5 ring finger protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:24,215,493...24,217,983
Ensembl chr 7:24,215,703...24,217,972
JBrowse link
G SEL1L SEL1L adaptor subunit of ERAD E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:104,219,628...104,283,250
Ensembl chr 7:104,218,301...104,283,244
JBrowse link
G SYVN1 synoviolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,059,444...7,066,617
Ensembl chr 2:7,059,462...7,072,809
JBrowse link
G UBXN6 UBX domain protein 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:74,357,522...74,378,600
Ensembl chr 2:74,340,838...74,378,595
JBrowse link
G VCP valosin containing protein involved_in ISS
IEA
UniProt
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,796,446...235,876,321
JBrowse link
estrogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SULT1E1 sulfotransferase family 1E, estrogen-preferring, member 1 involved_in ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr 8:66,811,536...66,838,181 JBrowse link
ethanol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH1C alcohol dehydrogenase 1C (class I), gamma polypeptide involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:121,089,355...121,105,010
Ensembl chr 8:121,020,910...121,108,190
JBrowse link
G ALDH2 aldehyde dehydrogenase 2 family member involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr14:39,902,317...39,933,113
Ensembl chr14:39,896,565...39,933,124
JBrowse link
G LOC100512795 alcohol dehydrogenase class 4 mu/sigma chain involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1338643|PMID:10358022)
(MGI:54726|PMID:518534)
Ensembl
Ensembl
MGI
PMID:518534 PMID:10358022 GO_REF:0000107 MGI:1338643 MGI:54726 NCBI chr 8:121,020,683...121,041,735
Ensembl chr 8:121,020,910...121,108,190
JBrowse link
G LOC100623441 sulfotransferase 1C4 involved_in ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr 3:47,765,022...47,777,178 JBrowse link
G LOC100624389 sulfotransferase 1C4-like involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:47,787,762...47,803,281
Ensembl chr 3:47,787,966...47,807,385
JBrowse link
G LOC100624541 sulfotransferase family cytosolic 1B member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:66,727,047...66,748,761
Ensembl chr 8:66,728,191...66,743,873
JBrowse link
G SULT1A3 sulfotransferase family 1A member 3 involved_in ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr 3:18,351,205...18,354,653
Ensembl chr 3:18,351,621...18,354,651
JBrowse link
G SULT1E1 sulfotransferase family 1E, estrogen-preferring, member 1 involved_in ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr 8:66,811,536...66,838,181 JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:53,525,496...53,536,723
Ensembl chr 6:53,524,765...53,536,721
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:78,131,236...78,202,518
Ensembl chr 2:78,124,269...78,202,535
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr17:4,934,379...4,950,093
Ensembl chr17:4,933,453...4,950,346
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr16:68,329,785...68,352,020
Ensembl chr16:68,313,884...68,350,261
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:270,748,534...270,757,717
Ensembl chr 1:270,748,537...270,758,130
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:238,536,341...238,541,756
Ensembl chr 1:238,536,343...238,541,333
JBrowse link
G EXOSC5 exosome component 5 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 6:49,373,378...49,381,875
Ensembl chr 6:49,373,378...49,382,180
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr13:28,176,806...28,206,435
Ensembl chr13:28,176,787...28,208,935
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr11:12,817,081...12,825,847
Ensembl chr11:12,817,110...12,825,847
JBrowse link
G EXOSC9 exosome component 9 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 8:102,265,656...102,278,179
Ensembl chr 8:102,264,470...102,303,842
JBrowse link
farnesol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1C3 aldo-keto reductase family 1 member C3 involved_in ISO (PMID:21187079) UniProt PMID:21187079 NCBI chr10:65,650,223...65,679,878
Ensembl chr10:65,576,464...65,678,248
JBrowse link
farnesyl diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLPP6 phospholipid phosphatase 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 Ensembl chr 1:217,304,115...217,305,017 JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HACL1 2-hydroxyacyl-CoA lyase 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
Ensembl
GO_Central
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:2,786,007...2,840,882
Ensembl chr13:2,766,361...2,840,902
JBrowse link
G HAO1 hydroxyacid oxidase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr17:16,746,153...16,802,460
Ensembl chr17:16,744,440...16,802,442
JBrowse link
G ILVBL ilvB acetolactate synthase like involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:62,435,368...62,447,030
Ensembl chr 2:62,435,155...62,451,700
JBrowse link
G PEX13 peroxisomal biogenesis factor 13 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2670243|PMID:12897163) Ensembl
Ensembl
MGI
PMID:12897163 GO_REF:0000107 MGI:2670243 NCBI chr 3:80,757,470...80,791,107
Ensembl chr 3:80,753,908...80,791,056
JBrowse link
G PHYH phytanoyl-CoA 2-hydroxylase involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:1097297|PMID:9326939), (MGI:3052413|PMID:12915479)
GO_Central
Ensembl
GO_Central
MGI
RGD
PMID:9326939 PMID:10588950 PMID:12915479 PMID:21873635 GO_REF:0000107 MGI:1097297 MGI:3052413 RGD:727286 NCBI chr10:48,404,298...48,423,978
Ensembl chr10:48,404,293...48,423,978
JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:121,530,449...121,578,994
Ensembl chr 1:121,526,295...121,579,121
JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
GO_Central
Ensembl
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr  X:124,485,076...124,501,742
Ensembl chr  X:124,485,235...124,503,195
JBrowse link
G ABCD2 ATP binding cassette subfamily D member 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:71,123,187...71,180,758
Ensembl chr 5:71,122,320...71,180,723
JBrowse link
G ABCD3 ATP binding cassette subfamily D member 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 4:122,847,925...122,929,454
Ensembl chr 4:122,837,525...122,953,257
JBrowse link
G ABCD4 ATP binding cassette subfamily D member 4 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 7:97,568,193...97,585,693
Ensembl chr 7:97,567,712...97,585,679
JBrowse link
G ACAA1 acetyl-CoA acyltransferase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr13:22,964,844...23,020,138
Ensembl chr13:22,964,875...23,020,143
JBrowse link
G ACAA2 acetyl-CoA acyltransferase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
GO_Central
RGD
PMID:11879205 PMID:21873635 RGD:2317624 NCBI chr 1:99,284,467...99,310,759
Ensembl chr 1:99,280,800...99,332,381
JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA
IBA
ISS
(PMID:21873635) InterPro
InterPro
Ensembl
GO_Central
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,380...137,595,108
JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO RGD PMID:8034667 RGD:631729 NCBI chr12:52,573,521...52,581,755
Ensembl chr12:52,576,401...52,581,755
JBrowse link
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
G ACAT2 acetyl-CoA acetyltransferase 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:7,600,616...7,612,861
Ensembl chr 1:7,598,735...7,612,811
JBrowse link
G ACOX1 acyl-CoA oxidase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:5,450,913...5,479,550
Ensembl chr12:5,428,360...5,479,544
JBrowse link
G ACOX2 acyl-CoA oxidase 2 involved_in IEA
ISO