Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:organonitrogen compound catabolic process
go back to main search page
Accession:GO:1901565 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of organonitrogen compound.
Synonyms:exact_synonym: organonitrogen compound breakdown;   organonitrogen compound catabolism;   organonitrogen compound degradation

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:19933275), (PMID:21238436) UniProt
Ensembl		 PMID:19933275 PMID:21238436 GO_REF:0000107 NCBI chrNW_004936551:2,312,510...2,335,810
Ensembl chrNW_004936551:2,312,489...2,335,815 		JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family member L1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936898:456,299...484,681
Ensembl chrNW_004936898:456,521...484,282 		JBrowse link
G Aldh1l2 aldehyde dehydrogenase 1 family member L2 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936492:9,605,611...9,657,717
Ensembl chrNW_004936492:9,605,708...9,657,743 		JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:2,101,184...2,125,377
Ensembl chrNW_004936636:2,102,036...2,125,532 		JBrowse link
5-methylcytosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101960775 cell division cycle and apoptosis regulator protein 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936521:9,573,918...9,624,469
Ensembl chrNW_004936521:9,569,760...9,625,236
Ensembl chrNW_004936521:9,569,760...9,625,236 		JBrowse link
G Stpg4 sperm-tail PG-rich repeat containing 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23560077) Ensembl
MGI		 PMID:23560077 GO_REF:0000107 NCBI chrNW_004936508:5,229,734...5,267,094
Ensembl chrNW_004936508:5,227,465...5,267,071 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936752:440,137...577,339
Ensembl chrNW_004936752:440,136...577,615 		JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936556:292,551...391,644
Ensembl chrNW_004936556:292,586...385,741 		JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:594,647...626,016
Ensembl chrNW_004936551:591,695...626,056 		JBrowse link
G Nudt7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11415433) Ensembl
MGI		 PMID:11415433 GO_REF:0000107 NCBI chrNW_004936475:26,079,298...26,095,466
Ensembl chrNW_004936475:26,079,275...26,089,889 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,159,654...2,161,657 JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acr acrosin ISO RGD PMID:28859281 RGD:13464336 NCBI chrNW_004936629:104,301...111,377 JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101962175 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936909:199,863...205,318
Ensembl chrNW_004936909:199,861...205,356 		JBrowse link
G LOC106145632 diphosphoinositol polyphosphate phosphohydrolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:24,722,448...24,772,183
Ensembl chrNW_004936476:24,668,660...24,769,766 		JBrowse link
G Nudt4 nudix hydrolase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936507:9,861,971...9,868,763 JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:8894685)
(PMID:11591798), (PMID:8663040)
(PMID:10720488), (PMID:10899903), (PMID:14607964), (PMID:15630442), (PMID:16841096), (PMID:18340377), (PMID:9478961)
(PMID:7731963), (PMID:9272950)
(PMID:1618849), (PMID:2015347), (PMID:2387582), (PMID:7592575), (PMID:8663040), (PMID:8894685), (PMID:9272950)
(PMID:7670465)		 MGI
TreeGrafter
RGD		 PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 More... GO_REF:0000118 RGD:152995394 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Ada2 adenosine deaminase 2 involved_in ISO (PMID:20147294) UniProt PMID:20147294 NCBI chrNW_004936807:232,851...262,593 JBrowse link
G Adal adenosine deaminase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:6,501,887...6,541,796
Ensembl chrNW_004936471:6,501,891...6,524,141 		JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G LOC101972479 adenosine deaminase-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936530:2,034,514...2,041,099 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (PMID:28746349) MGI PMID:28746349 NCBI chrNW_004936528:7,847,156...7,891,585
Ensembl chrNW_004936528:7,848,096...7,890,627 		JBrowse link
G Nt5e 5'-nucleotidase ecto involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:5,797,218...5,846,118
Ensembl chrNW_004936510:5,797,212...5,846,124 		JBrowse link
G Nudt9 nudix hydrolase 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11825615) Ensembl
MGI		 PMID:11825615 GO_REF:0000107 NCBI chrNW_004936905:586,160...616,490
Ensembl chrNW_004936905:584,558...616,508 		JBrowse link
alkaloid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961588 cytochrome P450 2D17 involved_in ISO (PMID:15039299) BHF-UCL PMID:15039299 NCBI chrNW_004936718:153,340...157,966 JBrowse link
allantoin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Allc allantoicase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936532:1,798,884...1,815,666
Ensembl chrNW_004936532:1,798,884...1,815,676 		JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (PMID:8064675) MGI PMID:8064675 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (PMID:28746349) MGI PMID:28746349 NCBI chrNW_004936528:7,847,156...7,891,585
Ensembl chrNW_004936528:7,848,096...7,890,627 		JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,535,197...21,542,417
Ensembl chrNW_004936474:21,535,467...21,542,588 		JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB involved_in ISO (PMID:11690631) MGI PMID:11690631 NCBI chrNW_004936493:12,520,480...12,547,394
Ensembl chrNW_004936493:12,520,480...12,538,888 		JBrowse link
G Nt5e 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16547283) Ensembl
MGI
TreeGrafter
RGD		 PMID:16547283 PMID:21414400 PMID:30269308 GO_REF:0000107 GO_REF:0000118 RGD:152995394 RGD:5134346 NCBI chrNW_004936510:5,797,218...5,846,118
Ensembl chrNW_004936510:5,797,212...5,846,124 		JBrowse link
G Tymp thymidine phosphorylase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936629:315,609...320,356
Ensembl chrNW_004936629:315,610...319,076 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc1 anaphase promoting complex subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936783:509,287...591,153
Ensembl chrNW_004936783:511,713...590,187 		JBrowse link
G Anapc10 anaphase promoting complex subunit 10 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936535:3,984,980...4,061,237
Ensembl chrNW_004936535:3,984,619...4,062,413 		JBrowse link
G Anapc11 anaphase promoting complex subunit 11 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936594:5,402,290...5,407,510
Ensembl chrNW_004936594:5,402,453...5,407,509 		JBrowse link
G Anapc13 anaphase promoting complex subunit 13 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004936529:7,569,362...7,577,537 JBrowse link
G Anapc15 anaphase promoting complex subunit 15 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004936498:1,460,795...1,468,363
Ensembl chrNW_004936498:1,463,810...1,468,351 		JBrowse link
G Anapc16 anaphase promoting complex subunit 16 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004936521:6,680,119...6,696,661
Ensembl chrNW_004936521:6,678,755...6,697,488 		JBrowse link
G Anapc2 anaphase promoting complex subunit 2 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004936669:797,475...808,952
Ensembl chrNW_004936669:797,318...811,721 		JBrowse link
G Anapc4 anaphase promoting complex subunit 4 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936477:4,134,449...4,166,496
Ensembl chrNW_004936477:4,134,403...4,166,537 		JBrowse link
G Anapc5 anaphase promoting complex subunit 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936558:2,967,684...3,006,833
Ensembl chrNW_004936558:2,967,817...3,006,718 		JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004936558:3,365,729...3,391,292
Ensembl chrNW_004936558:3,363,807...3,391,438 		JBrowse link
G Cdc16 cell division cycle 16 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937030:217,078...242,126
Ensembl chrNW_004937030:216,744...241,196 		JBrowse link
G Cdc20 cell division cycle 20 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:24,760,258...24,765,069
Ensembl chrNW_004936474:24,760,298...24,767,725 		JBrowse link
G Cdc20b cell division cycle 20B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936480:12,593,216...12,640,661
Ensembl chrNW_004936480:12,593,216...12,640,661 		JBrowse link
G Cdc23 cell division cycle 23 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936531:7,371,818...7,392,999
Ensembl chrNW_004936531:7,370,358...7,393,049 		JBrowse link
G Cdc26 cell division cycle 26 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936559:321,141...330,103
Ensembl chrNW_004936559:321,083...331,567 		JBrowse link
G Cdc27 cell division cycle 27 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:2,700,997...2,762,180
Ensembl chrNW_004936541:2,700,997...2,762,147 		JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:10500095) MGI
Ensembl		 PMID:10500095 GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G Fbxo31 F-box protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:1,801,539...1,831,988
Ensembl chrNW_004936641:1,801,548...1,830,440 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:2,000,872...2,007,569
Ensembl chrNW_004936588:1,993,721...2,009,240 		JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C involved_in ISO (PMID:19822757), (PMID:9122200) UniProt PMID:9122200 PMID:19822757 NCBI chrNW_004936514:7,204,332...7,208,340
Ensembl chrNW_004936514:7,199,539...7,207,655 		JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:643,358...648,293
Ensembl chrNW_004936886:640,745...648,531 		JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:262,653...397,753
Ensembl chrNW_004936608:262,445...397,762 		JBrowse link
G Fah fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11209059) Ensembl
MGI		 PMID:11209059 GO_REF:0000107 NCBI chrNW_004936471:38,140,324...38,174,472
Ensembl chrNW_004936471:38,140,273...38,174,702 		JBrowse link
G Nos1 nitric oxide synthase 1 involved_in ISO PMID:1383204 BHF-UCL PMID:1383204 RGD:8553334 NCBI chrNW_004936558:5,162,471...5,302,488
Ensembl chrNW_004936558:5,233,459...5,301,414 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051 		JBrowse link
G Nos3 nitric oxide synthase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:6,427,147...6,445,770
Ensembl chrNW_004936527:6,427,093...6,446,534 		JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936486:12,723,363...12,743,367
Ensembl chrNW_004936486:12,723,305...12,743,422 		JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:15753084 GO_REF:0000118 RGD:8693655 NCBI chrNW_004936495:11,004,296...11,045,467
Ensembl chrNW_004936495:11,004,176...11,045,472 		JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oat ornithine aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936486:12,723,363...12,743,367
Ensembl chrNW_004936486:12,723,305...12,743,422 		JBrowse link
aromatic amino acid family catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tat tyrosine aminotransferase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:22,190,282...22,199,398
Ensembl chrNW_004936475:22,189,728...22,199,672 		JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:12753071 MGI
TreeGrafter
Ensembl		 PMID:12753071 GO_REF:0000107 GO_REF:0000118 RGD:1299508 NCBI chrNW_004936581:823,665...847,579
Ensembl chrNW_004936581:821,771...847,704 		JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936564:6,280,890...6,299,838
Ensembl chrNW_004936564:6,280,014...6,299,856 		JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932 		JBrowse link
G LOC101962681 aspartate aminotransferase, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936527:626,017...628,228 JBrowse link
G LOC101977971 aspartate aminotransferase, mitochondrial-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936739:419,221...420,552 JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chrNW_004936488:3,320,357...3,340,463
Ensembl chrNW_004936488:3,318,422...3,340,626 		JBrowse link
bradykinin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpn1 carboxypeptidase N subunit 1 ISO RGD PMID:11299220 RGD:7401264 NCBI chrNW_004936636:145,148...172,865
Ensembl chrNW_004936636:145,024...172,876 		JBrowse link
G Ctsh cathepsin H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:37,135,200...37,156,081
Ensembl chrNW_004936471:37,131,817...37,156,476 		JBrowse link
G Ece1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,034,134...7,083,005
Ensembl chrNW_004936474:7,034,134...7,083,005 		JBrowse link
G Ide insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:2,230,477...2,318,562
Ensembl chrNW_004936601:2,230,283...2,318,752 		JBrowse link
G LOC101968921 angiotensin-converting enzyme involved_in ISO
IEA		 RGD
Ensembl		 PMID:2172462 PMID:11299220 GO_REF:0000107 RGD:7401264 RGD:8142366 NCBI chrNW_004936541:4,157,847...4,178,156
Ensembl chrNW_004936541:4,157,393...4,178,177 		JBrowse link
G Mme membrane metalloendopeptidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:2,513,896...2,595,896
Ensembl chrNW_004936519:2,513,704...2,595,971 		JBrowse link
G Xpnpep1 X-prolyl aminopeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:801,563...853,107
Ensembl chrNW_004936486:801,328...853,147 		JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (PMID:14755340) MGI PMID:14755340 NCBI chrNW_004936548:2,385,756...2,454,423 JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14755340) RGD
MGI
Ensembl		 PMID:11733007 PMID:14755340 GO_REF:0000107 RGD:1582175 NCBI chrNW_004936664:2,865,804...2,890,038
Ensembl chrNW_004936664:2,864,231...2,890,018 		JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936661:3,799,998...3,817,560
Ensembl chrNW_004936661:3,799,955...3,819,851 		JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936510:9,904,703...10,081,532
Ensembl chrNW_004936510:9,902,670...10,081,587 		JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chrNW_004936501:13,467,603...13,471,810
Ensembl chrNW_004936501:13,467,305...13,471,858 		JBrowse link
G Dbt dihydrolipoamide branched chain transacylase E2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936748:342,655...386,017
Ensembl chrNW_004936748:342,394...386,000 		JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:16,247,230...16,271,597
Ensembl chrNW_004936479:16,243,829...16,271,616 		JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936478:4,118,752...4,219,908 JBrowse link
G Hibch 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936506:7,811,624...7,882,861
Ensembl chrNW_004936506:7,811,600...7,882,642 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chrNW_004936471:3,871,152...3,883,521
Ensembl chrNW_004936471:3,871,148...3,885,241 		JBrowse link
G LOC101962064 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936479:147,125...148,800 JBrowse link
G Ppm1k protein phosphatase, Mg2+/Mn2+ dependent 1K involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:742,081...765,728
Ensembl chrNW_004936685:742,075...766,307 		JBrowse link
G Slc25a44 solute carrier family 25 member 44 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936580:5,435,841...5,454,396
Ensembl chrNW_004936580:5,435,730...5,454,759 		JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:26,079,298...26,095,466
Ensembl chrNW_004936475:26,079,275...26,089,889 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,159,654...2,161,657 JBrowse link
calcitonin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ece1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,034,134...7,083,005
Ensembl chrNW_004936474:7,034,134...7,083,005 		JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde4a phosphodiesterase 4A involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936659:742,969...770,473
Ensembl chrNW_004936659:732,893...768,620 		JBrowse link
G Pde4b phosphodiesterase 4B involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936591:5,152,491...5,666,728
Ensembl chrNW_004936591:5,152,441...5,573,129 		JBrowse link
G Pde4c phosphodiesterase 4C involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936596:2,962,671...2,984,831
Ensembl chrNW_004936596:2,977,933...2,984,831 		JBrowse link
G Pde4d phosphodiesterase 4D involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936480:8,123,437...9,235,586
Ensembl chrNW_004936480:8,204,701...9,234,865 		JBrowse link
G Pde8a phosphodiesterase 8A involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936483:17,009,696...17,163,105
Ensembl chrNW_004936483:17,095,318...17,163,114 		JBrowse link
G Pde8b phosphodiesterase 8B involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936549:5,212,693...5,450,195
Ensembl chrNW_004936549:5,212,834...5,448,515 		JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase, fructose-bisphosphate A involved_in ISO (PMID:28049690) MGI PMID:28049690 NCBI chrNW_004936501:12,418,090...12,423,959
Ensembl chrNW_004936501:12,418,090...12,422,689 		JBrowse link
G Eno1 enolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,115,357...3,130,289
Ensembl chrNW_004936623:3,115,081...3,128,183 		JBrowse link
G Eno2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chrNW_004936709:904,647...913,445
Ensembl chrNW_004936709:904,031...913,451 		JBrowse link
G Eno3 enolase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,754,117...2,760,992
Ensembl chrNW_004936677:2,754,067...2,760,644 		JBrowse link
G Foxk1 forkhead box K1 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:30700909) UniProt
Ensembl		 PMID:30700909 GO_REF:0000107 NCBI chrNW_004936765:1,126,168...1,255,354
Ensembl chrNW_004936765:1,133,287...1,148,907 		JBrowse link
G Foxk2 forkhead box K2 acts_upstream_of
involved_in		 ISO
IEA		 (MGI:6281052|PMID:30700909) UniProt
Ensembl		 PMID:30700909 GO_REF:0000107 MGI:6281052 NCBI chrNW_004936923:109,973...166,952
Ensembl chrNW_004936923:111,248...170,535 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:12581789)
(PMID:10777777), (PMID:28918937)		 MGI PMID:10777777 PMID:12581789 PMID:28918937 NCBI chrNW_004936709:1,243,149...1,247,782 JBrowse link
G Hk1 hexokinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:9,067,062...9,139,112
Ensembl chrNW_004936521:9,066,999...9,159,793 		JBrowse link
G Pfkl phosphofructokinase, liver type involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936500:94,016...117,598
Ensembl chrNW_004936500:93,854...117,653 		JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19696889) Ensembl
MGI
TreeGrafter		 PMID:19696889 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936512:6,006,247...6,031,939
Ensembl chrNW_004936512:6,006,046...6,032,899 		JBrowse link
G Pfkp phosphofructokinase, platelet involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:11,105,814...11,161,238
Ensembl chrNW_004936484:11,103,142...11,161,344 		JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:12189148) UniProt PMID:12189148 NCBI chrNW_004936636:2,240,452...2,248,689
Ensembl chrNW_004936636:2,236,508...2,248,768 		JBrowse link
G Pgam2 phosphoglycerate mutase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:19,021,928...19,026,110
Ensembl chrNW_004936478:19,020,048...19,024,394 		JBrowse link
G Pgk1 phosphoglycerate kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936547:286,267...310,062
Ensembl chrNW_004936547:286,267...310,062 		JBrowse link
G Pkm pyruvate kinase M1/2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:31,589,322...31,617,891
Ensembl chrNW_004936471:31,589,324...31,617,873 		JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:948,151...951,430
Ensembl chrNW_004936709:945,201...951,441 		JBrowse link
carnitine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase long chain involved_in ISO (MGI:1321427|PMID:9861014) BHF-UCL PMID:9861014 MGI:1321427 NCBI chrNW_004936845:66,674...96,248
Ensembl chrNW_004936845:66,241...96,249 		JBrowse link
CAT tailing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nemf nuclear export mediator factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936583:209,818...255,439
Ensembl chrNW_004936583:209,813...255,131 		JBrowse link
catecholamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747 		JBrowse link
G LOC101965228 leucine-rich repeat-containing protein 51 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:1,446,065...1,465,127
Ensembl chrNW_004936498:1,447,282...1,452,087
Ensembl chrNW_004936498:1,447,282...1,452,087 		JBrowse link
G LOC120889646 transmembrane O-methyltransferase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118
cellular modified amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggact gamma-glutamylamine cyclotransferase involved_in IEA UniProt
Ensembl		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936472:10,127,305...10,167,543
Ensembl chrNW_004936472:10,127,470...10,166,552 		JBrowse link
ceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acer1 alkaline ceramidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12783875) Ensembl
MGI
TreeGrafter		 PMID:12783875 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:3,688,244...3,705,831
Ensembl chrNW_004936588:3,688,244...3,705,831 		JBrowse link
G Acer2 alkaline ceramidase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936652:1,289,445...1,329,236
Ensembl chrNW_004936652:1,289,382...1,329,409 		JBrowse link
G Acer3 alkaline ceramidase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:5,496,991...5,653,206
Ensembl chrNW_004936498:5,496,991...5,653,206 		JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936554:104,666...141,761
Ensembl chrNW_004936554:104,229...141,512 		JBrowse link
G Asah2 N-acylsphingosine amidohydrolase 2 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936735:2,004,373...2,092,501
Ensembl chrNW_004936735:2,031,844...2,092,347 		JBrowse link
G Cel carboxyl ester lipase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11733511) Ensembl
MGI
TreeGrafter		 PMID:11733511 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936487:19,463,219...19,472,029
Ensembl chrNW_004936487:19,463,182...19,469,900 		JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde1a phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chrNW_004936509:10,819,067...11,142,964
Ensembl chrNW_004936509:10,818,912...11,142,501 		JBrowse link
G Pde2a phosphodiesterase 2A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:1,856,256...1,944,405
Ensembl chrNW_004936498:1,856,144...1,944,412 		JBrowse link
G Pde5a phosphodiesterase 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12554648) Ensembl
MGI		 PMID:12554648 GO_REF:0000107 NCBI chrNW_004936869:24,265...117,120
Ensembl chrNW_004936869:39,122...117,127 		JBrowse link
G Pde9a phosphodiesterase 9A involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936500:1,201,843...1,266,818
Ensembl chrNW_004936500:1,203,437...1,267,095 		JBrowse link
chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg5 autophagy related 5 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chrNW_004936564:2,759,085...2,885,394
Ensembl chrNW_004936564:2,758,598...2,885,420 		JBrowse link
G Atg7 autophagy related 7 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in
acts_upstream_of_or_within		 ISO PMID:18644871 ParkinsonsUK-UCL
MGI		 PMID:18644871 RGD:10412301 NCBI chrNW_004936542:7,577,192...7,581,598
Ensembl chrNW_004936542:7,577,149...7,581,923 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18579532) Ensembl
MGI		 PMID:18579532 GO_REF:0000107 NCBI chrNW_004936479:9,584,221...9,622,330
Ensembl chrNW_004936479:9,584,221...9,610,420 		JBrowse link
G Synpo2 synaptopodin 2 involved_in ISO PMID:23434281 ARUK-UCL PMID:23434281 RGD:12793031 NCBI chrNW_004936869:321,821...461,253 JBrowse link
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chi3l1 chitinase 3 like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936567:1,411,080...1,418,332
Ensembl chrNW_004936567:1,411,037...1,418,801 		JBrowse link
G Chia chitinase acidic involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:11085997 GO_REF:0000107 GO_REF:0000118 RGD:5000759 NCBI chrNW_004939091:1,194...12,273
Ensembl chrNW_004939091:1,190...12,272 		JBrowse link
G Chit1 chitinase 1 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936567:1,373,727...1,385,694
Ensembl chrNW_004936567:1,376,768...1,385,616 		JBrowse link
G Ctbs chitobiase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:2751306 GO_REF:0000118 RGD:2301430 NCBI chrNW_004936608:1,048,696...1,064,383
Ensembl chrNW_004936608:1,048,922...1,068,761 		JBrowse link
G Ovgp1 oviductal glycoprotein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936690:95,985...108,390
Ensembl chrNW_004936690:96,091...105,613 		JBrowse link
choline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmgdh dimethylglycine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:6,838,773...6,899,961
Ensembl chrNW_004936549:6,839,295...6,899,911 		JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gusb glucuronidase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,721,273...7,732,468
Ensembl chrNW_004936543:7,721,763...7,731,897 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,838,212...1,842,399
Ensembl chrNW_004936529:1,838,676...1,841,188 		JBrowse link
G Hyal4 hyaluronidase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23086929) Ensembl
MGI		 PMID:23086929 GO_REF:0000107 NCBI chrNW_004936605:1,645,204...1,666,510
Ensembl chrNW_004936605:1,645,204...1,666,510 		JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:39,564,431...39,637,394
Ensembl chrNW_004936470:39,564,335...39,637,544 		JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA involved_in ISO (PMID:22925580) MGI PMID:22925580 NCBI chrNW_004936478:8,785,984...8,834,776 JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:668,380...713,720
Ensembl chrNW_004936619:668,351...696,306 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:22,508,602...22,531,604
Ensembl chrNW_004936478:22,508,559...22,531,898 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (PMID:14715930) MGI PMID:14715930 NCBI chrNW_004936469:20,465,767...20,513,084
Ensembl chrNW_004936469:20,465,767...20,513,075 		JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin ISO RGD PMID:14576052 RGD:8554807 NCBI chrNW_004936520:10,140,784...10,410,082
Ensembl chrNW_004936520:10,140,784...10,409,851 		JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11415433) Ensembl
MGI
TreeGrafter		 PMID:11415433 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:26,079,298...26,095,466
Ensembl chrNW_004936475:26,079,275...26,089,889 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,159,654...2,161,657 JBrowse link
G Vnn1 vanin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936560:701,857...729,516
Ensembl chrNW_004936560:701,892...729,526 		JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:406,389...446,167
Ensembl chrNW_004936636:407,186...446,125 		JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936870:25,039...34,601
Ensembl chrNW_004936870:25,039...34,601 		JBrowse link
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004939393:628...6,234
Ensembl chrNW_004939393:628...6,201 		JBrowse link
G Apobec2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936476:18,759,040...18,769,815
Ensembl chrNW_004936476:18,758,582...18,769,835 		JBrowse link
G Cda cytidine deaminase involved_in ISO
IEA		 RGD
TreeGrafter
InterPro
Ensembl		 PMID:675715 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:2316616 NCBI chrNW_004936474:6,543,295...6,564,575
Ensembl chrNW_004936474:6,543,220...6,566,308 		JBrowse link
G Cdadc1 cytidine and dCMP deaminase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936565:2,336,613...2,395,816
Ensembl chrNW_004936565:2,336,744...2,387,195 		JBrowse link
cytoplasm protein quality control term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004936474:5,373,303...5,492,950
Ensembl chrNW_004936474:5,373,186...5,493,635 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004936470:41,222,782...41,345,755
Ensembl chrNW_004936470:41,252,951...41,344,134 		JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961559 E3 ubiquitin-protein ligase RNF126 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:231,723...237,969
Ensembl chrNW_004936588:255,639...260,291
Ensembl chrNW_004936588:255,639...260,291 		JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004936474:5,373,303...5,492,950
Ensembl chrNW_004936474:5,373,186...5,493,635 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:29033132) UniProt PMID:29033132 NCBI chrNW_004936470:41,222,782...41,345,755
Ensembl chrNW_004936470:41,252,951...41,344,134 		JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936769:744,862...758,086
Ensembl chrNW_004936769:744,864...758,452 		JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:744,862...758,086
Ensembl chrNW_004936769:744,864...758,452 		JBrowse link
G Ddo D-aspartate oxidase involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936564:6,280,890...6,299,838
Ensembl chrNW_004936564:6,280,014...6,299,856 		JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936769:744,862...758,086
Ensembl chrNW_004936769:744,864...758,452 		JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:5,929,262...5,932,334
Ensembl chrNW_004936555:5,928,601...5,932,400 		JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (PMID:10720488) MGI PMID:10720488 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,535,197...21,542,417
Ensembl chrNW_004936474:21,535,467...21,542,588 		JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (PMID:7670465)
(PMID:7592575)
(PMID:14607964), (PMID:9478961)
(PMID:7731963)		 MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:4,180,607...4,238,623
Ensembl chrNW_004936561:4,180,546...4,229,036 		JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:39,564,431...39,637,394
Ensembl chrNW_004936470:39,564,335...39,637,544 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:430,274...432,027
Ensembl chrNW_004936594:430,506...432,095 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:668,380...713,720
Ensembl chrNW_004936619:668,351...696,306 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:22,508,602...22,531,604
Ensembl chrNW_004936478:22,508,559...22,531,898 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:20,465,767...20,513,084
Ensembl chrNW_004936469:20,465,767...20,513,075 		JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:12,880,745...12,884,240
Ensembl chrNW_004936501:12,879,241...12,884,287 		JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in
acts_upstream_of_or_within		 ISO (PMID:10720488)
(PMID:7670465)
(PMID:10720488), (PMID:14607964), (PMID:9478961)
(PMID:7592575)
(PMID:7731963), (PMID:9272950)		 MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 More... NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:8,191,925...8,279,806
Ensembl chrNW_004936503:8,192,049...8,278,790 		JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936587:1,555,534...1,665,217
Ensembl chrNW_004936587:1,555,531...1,665,289 		JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arsb arylsulfatase B involved_in ISO (PMID:24240681) MGI PMID:24240681 NCBI chrNW_004936549:6,654,259...6,827,647
Ensembl chrNW_004936549:6,653,978...6,826,349 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:31,712,485...31,738,273
Ensembl chrNW_004936471:31,709,491...31,738,245 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691 		JBrowse link
G Ids iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:62,966...88,844
Ensembl chrNW_004936513:62,993...88,774 		JBrowse link
G Idua alpha-L-iduronidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19751987)
(PMID:19834056)		 Ensembl
MGI		 PMID:19751987 PMID:19834056 GO_REF:0000107 NCBI chrNW_004936477:22,200,471...22,215,473
Ensembl chrNW_004936477:22,200,474...22,215,077 		JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:5,929,262...5,932,334
Ensembl chrNW_004936555:5,928,601...5,932,400 		JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO PMID:17234634 MGI PMID:17234634 RGD:8553712 NCBI chrNW_004936476:16,740,643...16,742,831
Ensembl chrNW_004936476:16,740,581...16,742,866 		JBrowse link
G Gda guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:8,191,925...8,279,806
Ensembl chrNW_004936503:8,192,049...8,278,790 		JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:430,274...432,027
Ensembl chrNW_004936594:430,506...432,095 		JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,535,197...21,542,417
Ensembl chrNW_004936474:21,535,467...21,542,588 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:5560407) MGI PMID:5560407 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt15 nudix hydrolase 15 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936565:1,380,981...1,389,908
Ensembl chrNW_004936565:1,381,655...1,389,048 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:4,180,607...4,238,623
Ensembl chrNW_004936561:4,180,546...4,229,036 		JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965734 U8 snoRNA-decapping enzyme involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20081199) Ensembl
MGI		 PMID:20081199 GO_REF:0000107 NCBI chrNW_004936529:4,825,277...4,827,011
Ensembl chrNW_004936529:4,825,189...4,826,886 		JBrowse link
dopamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Comt catechol-O-methyltransferase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9520487) Ensembl
MGI		 PMID:9520487 GO_REF:0000107 NCBI chrNW_004936619:3,847,059...3,883,866
Ensembl chrNW_004936619:3,876,299...3,882,747 		JBrowse link
G Dbh dopamine beta-hydroxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10051631) Ensembl
MGI
TreeGrafter		 PMID:10051631 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936669:3,302,014...3,326,233
Ensembl chrNW_004936669:3,301,802...3,320,643 		JBrowse link
G LOC101967457 putative DBH-like monooxygenase protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936971:172,262...179,921 JBrowse link
G Maoa monoamine oxidase A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9520487) Ensembl
MGI		 PMID:9520487 GO_REF:0000107 NCBI chrNW_004936502:9,816,443...9,888,002
Ensembl chrNW_004936502:9,815,319...9,888,026 		JBrowse link
G Moxd1 monooxygenase DBH like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936560:334,294...413,559
Ensembl chrNW_004936560:332,718...413,559 		JBrowse link
G Pde1b phosphodiesterase 1B involved_in
acts_upstream_of_positive_effect		 IEA
ISO		 (PMID:17559891) Ensembl
MGI		 PMID:17559891 GO_REF:0000107 NCBI chrNW_004936512:11,739,219...11,766,264
Ensembl chrNW_004936512:11,739,213...11,768,190 		JBrowse link
G Slc6a3 solute carrier family 6 member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9520487) Ensembl
MGI		 PMID:9520487 GO_REF:0000107 NCBI chrNW_004936815:359,775...400,690
Ensembl chrNW_004936815:359,775...400,690 		JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:430,274...432,027
Ensembl chrNW_004936594:430,506...432,095 		JBrowse link
G Tymp thymidine phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:315,609...320,356
Ensembl chrNW_004936629:315,610...319,076 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in
NOT|involved_in		 IEA
ISO		 (MGI:3584214|PMID:15772079) Ensembl
UniProt		 PMID:15772079 GO_REF:0000107 MGI:3584214 NCBI chrNW_004936478:22,508,602...22,531,604
Ensembl chrNW_004936478:22,508,559...22,531,898 		JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chrNW_004936501:12,880,745...12,884,240
Ensembl chrNW_004936501:12,879,241...12,884,287 		JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:39,564,431...39,637,394
Ensembl chrNW_004936470:39,564,335...39,637,544 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:430,274...432,027
Ensembl chrNW_004936594:430,506...432,095 		JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12234672) Ensembl
MGI		 PMID:12234672 GO_REF:0000107 NCBI chrNW_004936741:950,681...999,290
Ensembl chrNW_004936741:965,273...999,247 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:668,380...713,720
Ensembl chrNW_004936619:668,351...696,306 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:22,508,602...22,531,604
Ensembl chrNW_004936478:22,508,559...22,531,898 		JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dut deoxyuridine triphosphatase involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro		 PMID:1315924 PMID:3032103 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 RGD:2300191 RGD:2301218 NCBI chrNW_004936471:10,670,604...10,681,356 JBrowse link
G LOC101969523 deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial-like involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936471:8,287,036...8,287,704 JBrowse link
elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela1 chymotrypsin like elastase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24793170) Ensembl
MGI		 PMID:24793170 GO_REF:0000107 NCBI chrNW_004936512:8,901,674...8,919,819
Ensembl chrNW_004936512:8,905,339...8,919,819 		JBrowse link
G Ctsl cathepsin L involved_in ISO (MGI:6259330|PMID:12417635) UniProt PMID:12417635 MGI:6259330 NCBI chrNW_004936680:3,047,355...3,050,640 JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,107,567...5,117,843
Ensembl chrNW_004936551:5,106,285...5,117,843 		JBrowse link
epidermal growth factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Snx5 sorting nexin 5 ISO RGD PMID:16487940 RGD:13508623 NCBI chrNW_004936485:2,167,987...2,191,157
Ensembl chrNW_004936485:2,168,243...2,190,402 		JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:8,692,969...8,727,252
Ensembl chrNW_004936475:8,692,844...8,727,385 		JBrowse link
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936556:738,946...742,049
Ensembl chrNW_004936556:739,094...742,034 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,866,235...1,885,266
Ensembl chrNW_004936727:1,873,413...1,885,366 		JBrowse link
G Brsk2 BR serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:307,736...335,953
Ensembl chrNW_004936816:307,250...334,785 		JBrowse link
G Ccdc47 coiled-coil domain containing 47 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25009997) Ensembl
MGI		 PMID:25009997 GO_REF:0000107 NCBI chrNW_004936541:4,389,428...4,418,414
Ensembl chrNW_004936541:4,389,266...4,418,662 		JBrowse link
G CUNH1orf116 chromosome unknown C1orf116 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,586,969...5,615,159
Ensembl chrNW_004936557:5,584,324...5,616,998
Ensembl chrNW_004936557:5,584,324...5,616,998 		JBrowse link
G Derl1 derlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:24,262,401...24,286,713
Ensembl chrNW_004936470:24,262,091...24,286,577 		JBrowse link
G Derl2 derlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,328,783...2,342,068
Ensembl chrNW_004936677:2,328,904...2,342,080 		JBrowse link
G Derl3 derlin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,271,980...1,275,212
Ensembl chrNW_004936619:1,271,797...1,275,214 		JBrowse link
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:6,583,828...6,605,744
Ensembl chrNW_004936521:6,583,908...6,607,628 		JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:15936278) BHF-UCL PMID:15936278 NCBI chrNW_004936569:1,689,926...1,697,179
Ensembl chrNW_004936569:1,689,507...1,698,954 		JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936653:1,554,534...1,558,832
Ensembl chrNW_004936653:1,554,553...1,559,170 		JBrowse link
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:11,334,859...11,383,668
Ensembl chrNW_004936509:11,334,611...11,382,377 		JBrowse link
G Ecpas Ecm29 proteasome adaptor and scaffold involved_in ISO (PMID:15496406) UniProt PMID:15496406 NCBI chrNW_004936559:1,807,768...1,918,529
Ensembl chrNW_004936559:1,807,753...1,921,423 		JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11375934) Ensembl
MGI		 PMID:11375934 GO_REF:0000107 NCBI chrNW_004936577:4,486,617...4,516,379
Ensembl chrNW_004936577:4,486,885...4,513,555 		JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:5,352,964...5,424,944
Ensembl chrNW_004936481:5,352,956...5,424,944 		JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (MGI:6467680|PMID:17707796) UniProt PMID:17707796 MGI:6467680 NCBI chrNW_004936712:413,602...454,443
Ensembl chrNW_004936712:414,446...454,449 		JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936491:351,813...377,978
Ensembl chrNW_004936491:351,420...378,441 		JBrowse link
G Erlin1 ER lipid raft associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:80,583...116,027
Ensembl chrNW_004936636:80,564...116,694 		JBrowse link
G Erlin2 ER lipid raft associated 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936710:1,193,679...1,210,059
Ensembl chrNW_004936710:1,193,411...1,210,739 		JBrowse link
G Faf2 Fas associated factor family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:710,168...772,455
Ensembl chrNW_004936597:710,100...772,765 		JBrowse link
G Fbxo2 F-box protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15723043) Ensembl
MGI		 PMID:15723043 GO_REF:0000107 NCBI chrNW_004936474:521,235...526,151
Ensembl chrNW_004936474:521,123...526,959 		JBrowse link
G Fbxo6 F-box protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:531,873...538,596
Ensembl chrNW_004936474:533,254...542,907 		JBrowse link
G Foxred2 FAD dependent oxidoreductase domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:4,272,965...4,292,356
Ensembl chrNW_004936492:4,273,431...4,289,344 		JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,113,835...1,128,881
Ensembl chrNW_004936754:1,113,790...1,128,875 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,091,115...9,102,101
Ensembl chrNW_004936475:9,091,176...9,102,109 		JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:10,513,908...10,528,281
Ensembl chrNW_004936492:10,513,908...10,528,285 		JBrowse link
G Jkamp JNK1/MAPK8 associated membrane protein involved_in ISO (PMID:19269966) UniProt PMID:19269966 NCBI chrNW_004936495:3,839,057...3,849,062 JBrowse link
G LOC101973161 ER degradation-enhancing alpha-mannosidase-like protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,578,267...5,605,512
Ensembl chrNW_004936561:5,578,236...5,605,810 		JBrowse link
G Man1a1 mannosidase alpha class 1A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936658:1,981,203...2,148,349
Ensembl chrNW_004936658:1,983,787...2,150,280 		JBrowse link
G Man1b1 mannosidase alpha class 1B member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15294975) Ensembl
MGI		 PMID:15294975 GO_REF:0000107 NCBI chrNW_004936669:855,349...867,763
Ensembl chrNW_004936669:855,340...871,516 		JBrowse link
G Os9 OS9 endoplasmic reticulum lectin involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936646:1,832,434...1,860,200
Ensembl chrNW_004936646:1,832,015...1,859,576 		JBrowse link
G Rcn3 reticulocalbin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,382,467...3,396,111
Ensembl chrNW_004936664:3,382,494...3,395,705 		JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:8,906,848...9,028,792
Ensembl chrNW_004936525:8,906,631...9,004,372 		JBrowse link
G Rnf103 ring finger protein 103 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:977,650...997,623
Ensembl chrNW_004936712:977,644...999,051 		JBrowse link
G Rnf139 ring finger protein 139 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:23,157,312...23,168,565
Ensembl chrNW_004936470:23,152,765...23,168,571 		JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936755:331,658...367,604
Ensembl chrNW_004936755:331,619...367,533 		JBrowse link
G Rnf5 ring finger protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,422,207...1,424,808
Ensembl chrNW_004936727:1,422,207...1,424,739 		JBrowse link
G Sdf2l1 stromal cell derived factor 2 like 1 acts_upstream_of_or_within ISO PMID:23444373 MGI PMID:23444373 RGD:8554667 NCBI chrNW_004936619:2,049,920...2,051,944
Ensembl chrNW_004936619:2,049,922...2,051,944 		JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:7,731,033...7,739,410
Ensembl chrNW_004936524:7,731,058...7,740,310 		JBrowse link
G Sel1l SEL1L adaptor subunit of SYVN1 ubiquitin ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936488:9,838,092...9,903,780
Ensembl chrNW_004936488:9,838,092...9,903,839 		JBrowse link
G Sel1l2 SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:5,916,463...5,975,844
Ensembl chrNW_004936485:5,867,263...5,973,485 		JBrowse link
G Selenos selenoprotein S involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:2,589,773...2,600,837
Ensembl chrNW_004936483:2,589,828...2,599,987 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:1,599,453...1,616,480
Ensembl chrNW_004936588:1,598,164...1,616,599 		JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:22,197,625...22,288,941
Ensembl chrNW_004936473:22,197,321...22,288,941 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:328,767...330,963
Ensembl chrNW_004936501:326,451...330,983 		JBrowse link
G Syvn1 synoviolin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21245296) Ensembl
MGI		 PMID:21245296 GO_REF:0000107 NCBI chrNW_004936599:4,235,779...4,243,395
Ensembl chrNW_004936599:4,236,188...4,243,394 		JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:21,665,955...21,670,667
Ensembl chrNW_004936477:21,665,275...21,670,668 		JBrowse link
G Tmem67 transmembrane protein 67 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936544:6,887,867...6,931,669
Ensembl chrNW_004936544:6,887,532...6,932,179 		JBrowse link
G Tmub1 transmembrane and ubiquitin like domain containing 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936527:6,504,471...6,506,572
Ensembl chrNW_004936527:6,504,455...6,506,656 		JBrowse link
G Tmub2 transmembrane and ubiquitin like domain containing 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936541:653,051...657,116
Ensembl chrNW_004936541:653,343...657,106 		JBrowse link
G Tor1a torsin family 1 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:17,012,661...17,020,657
Ensembl chrNW_004936487:17,011,670...17,020,699 		JBrowse link
G Trim13 tripartite motif containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936565:2,976,681...2,989,036
Ensembl chrNW_004936565:2,976,729...2,989,088 		JBrowse link
G Trim25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:5,979,320...5,997,632
Ensembl chrNW_004936490:5,979,425...5,997,639 		JBrowse link
G Ube2g2 ubiquitin conjugating enzyme E2 G2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11278356) Ensembl
MGI		 PMID:11278356 GO_REF:0000107 NCBI chrNW_004936778:1,414,410...1,440,949
Ensembl chrNW_004936778:1,414,348...1,440,950 		JBrowse link
G Ube2j1 ubiquitin conjugating enzyme E2 J1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24020373)
(PMID:21245296)		 Ensembl
MGI		 PMID:21245296 PMID:24020373 GO_REF:0000107 NCBI chrNW_004936510:2,864,321...2,887,588
Ensembl chrNW_004936510:2,864,356...2,887,885 		JBrowse link
G Ube2j2 ubiquitin conjugating enzyme E2 J2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,862,577...1,875,216
Ensembl chrNW_004936737:1,862,578...1,875,248 		JBrowse link
G Ube4b ubiquitination factor E4B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936623:3,934,439...4,051,083
Ensembl chrNW_004936623:3,934,310...4,051,146 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936828:543,651...588,673
Ensembl chrNW_004936828:542,407...588,679 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936819:530,833...534,185
Ensembl chrNW_004936819:532,037...533,920 		JBrowse link
G Ubxn4 UBX domain protein 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:40,109,276...40,147,088
Ensembl chrNW_004936469:40,111,658...40,147,181 		JBrowse link
G Ubxn6 UBX domain protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,565,473...2,578,721
Ensembl chrNW_004936588:2,565,461...2,578,624 		JBrowse link
G Ubxn8 UBX domain protein 8 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936792:588,698...616,288
Ensembl chrNW_004936792:588,474...618,030 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:3,395,130...3,419,704
Ensembl chrNW_004936619:3,395,687...3,419,472 		JBrowse link
G Umod uromodulin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28437467) Ensembl
MGI		 PMID:28437467 GO_REF:0000107 NCBI chrNW_004936501:5,833,391...5,846,021
Ensembl chrNW_004936501:5,833,391...5,846,164 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:814,649...826,008
Ensembl chrNW_004936529:813,951...826,014 		JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:18,339,915...18,364,973
Ensembl chrNW_004936477:18,339,827...18,364,998 		JBrowse link
fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fitm2 fat storage inducing transmembrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:2,491,924...2,498,579
Ensembl chrNW_004936530:2,491,879...2,498,717 		JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:37,910,856...37,964,655
Ensembl chrNW_004936471:37,902,554...37,964,812 		JBrowse link
G Pm20d2 peptidase M20 domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936510:3,041,598...3,058,193
Ensembl chrNW_004936510:3,041,592...3,058,513 		JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galc galactosylceramidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11371512) InterPro
MGI
TreeGrafter
Ensembl		 PMID:11371512 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936488:15,444,184...15,519,395
Ensembl chrNW_004936488:15,444,801...15,518,856 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:11371512) MGI PMID:11371512 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136 		JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936530:7,543,743...7,621,392
Ensembl chrNW_004936530:7,543,682...7,622,667 		JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11544478), (PMID:15262267) UniProt
MGI
TreeGrafter
InterPro
Ensembl		 PMID:11544478 PMID:15262267 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936671:843,577...865,798
Ensembl chrNW_004936671:843,577...865,881 		JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gm2a GM2 ganglioside activator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9223328) Ensembl
MGI
TreeGrafter
InterPro		 PMID:9223328 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936647:4,126,524...4,140,800
Ensembl chrNW_004936647:4,126,577...4,140,786 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7937929), (PMID:9223328)
(PMID:8789434), (PMID:9645704)		 Ensembl
MGI
TreeGrafter		 PMID:7937929 PMID:8789434 PMID:9223328 PMID:9645704 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:31,712,485...31,738,273
Ensembl chrNW_004936471:31,709,491...31,738,245 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10021458), (PMID:12657883), (PMID:12756243), (PMID:15748167), (PMID:9223328)
(PMID:8566348)
(PMID:8789434), (PMID:9645704)		 Ensembl
MGI
TreeGrafter		 PMID:8566348 PMID:8789434 PMID:9223328 PMID:9645704 PMID:10021458 More... GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691 		JBrowse link
G Neu1 neuraminidase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:1,683,283...1,687,130
Ensembl chrNW_004936727:1,683,204...1,688,883 		JBrowse link
G Neu2 neuraminidase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936525:4,177,085...4,179,692
Ensembl chrNW_004936525:4,177,085...4,179,692 		JBrowse link
G Neu3 neuraminidase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:3,897,511...3,915,013
Ensembl chrNW_004936498:3,897,485...3,910,115 		JBrowse link
G Neu4 neuraminidase 4 involved_in ISO (PMID:15213228), (PMID:15847605)
(MGI:4361102|PMID:19506080)		 UniProt PMID:15213228 PMID:15847605 PMID:19506080 MGI:4361102 NCBI chrNW_004936745:172,983...175,470 JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,896,661...6,920,333
Ensembl chrNW_004936555:6,893,393...6,919,584 		JBrowse link
G Nudt18 nudix hydrolase 18 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:5,929,262...5,932,334
Ensembl chrNW_004936555:5,928,601...5,932,400 		JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba1 glucosylceramidase beta 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936524:3,730,833...3,742,526
Ensembl chrNW_004936524:3,730,833...3,742,531 		JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad1 glutamate decarboxylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:1,160,559...1,201,037
Ensembl chrNW_004936509:1,161,094...1,201,576 		JBrowse link
G Glud1 glutamate dehydrogenase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936601:5,415,857...5,435,964 JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:4193185) RGD
MGI
Ensembl		 PMID:4193185 PMID:16489927 GO_REF:0000107 RGD:13504861 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932 		JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:4193185) Ensembl
MGI		 PMID:4193185 GO_REF:0000107 NCBI chrNW_004936636:617,376...640,424
Ensembl chrNW_004936636:617,356...640,932 		JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase iron containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:7,529,217...7,562,881
Ensembl chrNW_004936496:7,530,415...7,562,847 		JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:8999827 GO_REF:0000118 RGD:1625237 NCBI chrNW_004936484:1,737,806...1,810,378
Ensembl chrNW_004936484:1,737,520...1,810,398 		JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16641247) Ensembl
MGI
TreeGrafter		 PMID:16641247 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936506:7,237,099...7,314,011
Ensembl chrNW_004936506:7,237,099...7,313,976 		JBrowse link
G Gls2 glutaminase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:825,957...842,184
Ensembl chrNW_004936646:823,682...842,199 		JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chrNW_004936482:18,606,124...18,648,989
Ensembl chrNW_004936482:18,606,124...18,648,681 		JBrowse link
glutathione catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936471:4,344,234...4,346,998
Ensembl chrNW_004936471:4,344,053...4,346,913 		JBrowse link
G Chac2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936491:324,540...336,619
Ensembl chrNW_004936491:324,524...336,601 		JBrowse link
G Dpep1 dipeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:379,112...384,711
Ensembl chrNW_004936641:379,083...391,918 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936619:762,278...791,610 JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936619:794,876...837,748
Ensembl chrNW_004936619:794,889...837,736 		JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936561:5,846,229...5,870,815
Ensembl chrNW_004936561:5,845,943...5,872,183 		JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gldc glycine decarboxylase involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936539:1,008,340...1,095,044
Ensembl chrNW_004936539:1,007,820...1,095,054 		JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amt aminomethyltransferase involved_in ISO (PMID:16051266) UniProt PMID:16051266 NCBI chrNW_004936529:1,049,364...1,054,458 JBrowse link
G Gcsh glycine cleavage system protein H involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro		 PMID:6402507 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 RGD:1598699 NCBI chrNW_004936475:28,749,545...28,760,242
Ensembl chrNW_004936475:28,749,580...28,760,230 		JBrowse link
G Gldc glycine decarboxylase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:6778858 GO_REF:0000118 RGD:1642728 NCBI chrNW_004936539:1,008,340...1,095,044
Ensembl chrNW_004936539:1,007,820...1,095,054 		JBrowse link
G LOC101966593 glycine cleavage system H protein, mitochondrial-like involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936492:10,439,917...10,440,967
Ensembl chrNW_004936475:28,749,580...28,760,230 		JBrowse link
glycolysis from storage polysaccharide through glucose-1-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19696889) Ensembl
MGI		 PMID:19696889 GO_REF:0000107 NCBI chrNW_004936512:6,006,247...6,031,939
Ensembl chrNW_004936512:6,006,046...6,032,899 		JBrowse link
glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adpgk ADP dependent glucokinase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936471:32,025,310...32,052,558
Ensembl chrNW_004936471:32,026,081...32,052,539 		JBrowse link
G Aldoa aldolase, fructose-bisphosphate A involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:12,418,090...12,423,959
Ensembl chrNW_004936501:12,418,090...12,422,689 		JBrowse link
G Aldob aldolase, fructose-bisphosphate B involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936524:9,584,302...9,592,961
Ensembl chrNW_004936524:9,584,140...9,596,276 		JBrowse link
G Aldoc aldolase, fructose-bisphosphate C involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936538:4,798,991...4,802,700
Ensembl chrNW_004936538:4,798,989...4,802,994 		JBrowse link
G Bpgm bisphosphoglycerate mutase involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936579:1,141,637...1,164,554
Ensembl chrNW_004936579:1,141,598...1,164,630 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO (PMID:23437220) MGI PMID:23437220 NCBI chrNW_004936778:515,600...530,828 JBrowse link
G Eno1 enolase 1 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936623:3,115,357...3,130,289
Ensembl chrNW_004936623:3,115,081...3,128,183 		JBrowse link
G Eno2 enolase 2 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936709:904,647...913,445
Ensembl chrNW_004936709:904,031...913,451 		JBrowse link
G Eno3 enolase 3 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936677:2,754,117...2,760,992
Ensembl chrNW_004936677:2,754,067...2,760,644 		JBrowse link
G Eno4 enolase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23446454) UniProt
MGI
TreeGrafter
InterPro		 PMID:23446454 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936486:6,760,400...6,785,098
Ensembl chrNW_004936486:6,760,400...6,783,066 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:29259245) MGI PMID:29259245 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G Fkrp fukutin related protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31296900) Ensembl
MGI		 PMID:31296900 GO_REF:0000107 NCBI chrNW_004936664:577,109...586,848
Ensembl chrNW_004936664:578,126...586,795 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in IEA
ISO		 UniProt
TreeGrafter
RGD		 PMID:28258188 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:13792662 NCBI chrNW_004936709:1,243,149...1,247,782 JBrowse link
G Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15546993), (PMID:19759366) UniProt
MGI
TreeGrafter		 PMID:15546993 PMID:19759366 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936570:819,562...830,072
Ensembl chrNW_004936570:819,387...829,087 		JBrowse link
G Gck glucokinase involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro		 PMID:4273555 PMID:4353083 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302790 RGD:2302851 NCBI chrNW_004936478:19,104,477...19,118,915
Ensembl chrNW_004936478:19,105,361...19,158,733 		JBrowse link
G Gpi glucose-6-phosphate isomerase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15665293)
(PMID:8417789)		 UniProt
MGI
TreeGrafter
InterPro
Ensembl		 PMID:8417789 PMID:15665293 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936570:1,582,120...1,608,537
Ensembl chrNW_004936570:1,579,372...1,608,788 		JBrowse link
G Hk1 hexokinase 1 involved_in IEA
ISO		 UniProt
TreeGrafter
RGD
InterPro		 PMID:4353083 PMID:15574336 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:1358232 RGD:2302851 NCBI chrNW_004936521:9,067,062...9,139,112
Ensembl chrNW_004936521:9,066,999...9,159,793 		JBrowse link
G Hk2 hexokinase 2 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936556:1,054,143...1,113,425
Ensembl chrNW_004936556:1,054,021...1,113,450 		JBrowse link
G Hk3 hexokinase 3 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936597:1,122,648...1,143,342
Ensembl chrNW_004936597:1,122,648...1,138,396 		JBrowse link
G Hkdc1 hexokinase domain containing 1 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936521:9,175,916...9,223,546
Ensembl chrNW_004936521:9,175,447...9,223,583 		JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A involved_in
acts_upstream_of		 IEA
ISO		 (PMID:17408640) Ensembl
MGI		 PMID:17408640 GO_REF:0000107 NCBI chrNW_004936565:335,238...394,683
Ensembl chrNW_004936565:334,393...394,715 		JBrowse link
G Ier3 immediate early response 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19096392) Ensembl
MGI		 PMID:19096392 GO_REF:0000107 NCBI chrNW_004936837:401,475...402,769
Ensembl chrNW_004936837:401,524...402,741 		JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
G LOC101965577 glyceraldehyde-3-phosphate dehydrogenase-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936647:829,278...830,661 JBrowse link
G LOC101972267 glyceraldehyde-3-phosphate dehydrogenase-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936480:21,383,185...21,384,257 JBrowse link
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,559,993...5,584,912
Ensembl chrNW_004936557:5,560,746...5,585,192 		JBrowse link
G Pfkl phosphofructokinase, liver type involved_in ISO
IEA		 RGD
InterPro
Ensembl
UniProt		 PMID:2931076 PMID:4273555 PMID:4353083 PMID:6458283 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 RGD:2301239 RGD:2302736 RGD:2302790 RGD:2302851 NCBI chrNW_004936500:94,016...117,598
Ensembl chrNW_004936500:93,854...117,653 		JBrowse link
G Pfkm phosphofructokinase, muscle involved_in ISO
IEA		 RGD
UniProt
Ensembl
InterPro		 PMID:2931076 PMID:8593533 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 RGD:1599363 RGD:2302736 NCBI chrNW_004936512:6,006,247...6,031,939
Ensembl chrNW_004936512:6,006,046...6,032,899 		JBrowse link
G Pfkp phosphofructokinase, platelet involved_in IEA
ISO		 InterPro
RGD
UniProt		 PMID:2931076 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:2302736 NCBI chrNW_004936484:11,105,814...11,161,238
Ensembl chrNW_004936484:11,103,142...11,161,344 		JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936636:2,240,452...2,248,689
Ensembl chrNW_004936636:2,236,508...2,248,768 		JBrowse link
G Pgam2 phosphoglycerate mutase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15665293) Ensembl
MGI
UniProt
InterPro		 PMID:15665293 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004936478:19,021,928...19,026,110
Ensembl chrNW_004936478:19,020,048...19,024,394 		JBrowse link
G Pgk1 phosphoglycerate kinase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15665293) RGD
MGI
TreeGrafter
UniProt
Ensembl
InterPro		 PMID:3091090 PMID:6405813 PMID:15665293 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 RGD:2302859 RGD:2302860 NCBI chrNW_004936547:286,267...310,062
Ensembl chrNW_004936547:286,267...310,062 		JBrowse link
G Pklr pyruvate kinase L/R involved_in ISO
IEA		 RGD
TreeGrafter
UniProt
InterPro		 PMID:4273555 PMID:4353083 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 RGD:2302790 RGD:2302851 NCBI chrNW_004936580:4,770,977...4,799,316
Ensembl chrNW_004936580:4,767,109...4,779,916 		JBrowse link
G Pkm pyruvate kinase M1/2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7262549), (PMID:7295297) InterPro
TreeGrafter
MGI
RGD
UniProt
Ensembl		 PMID:4273555 PMID:7262549 PMID:7295297 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 RGD:2302790 NCBI chrNW_004936471:31,589,322...31,617,891
Ensembl chrNW_004936471:31,589,324...31,617,873 		JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,258,678...1,266,925
Ensembl chrNW_004936569:1,259,105...1,266,925 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20935145) Ensembl
MGI		 PMID:20935145 GO_REF:0000107 NCBI chrNW_004936606:4,518,525...4,540,109
Ensembl chrNW_004936606:4,518,584...4,540,114 		JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936709:948,151...951,430
Ensembl chrNW_004936709:945,201...951,441 		JBrowse link
G Ucp2 uncoupling protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:3,059,700...3,066,112
Ensembl chrNW_004936498:3,059,297...3,066,197 		JBrowse link
glycolytic process from galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10915771) Ensembl
MGI		 PMID:10915771 GO_REF:0000107 NCBI chrNW_004936594:944,936...950,537
Ensembl chrNW_004936594:944,944...949,838 		JBrowse link
G Galt galactose-1-phosphate uridylyltransferase acts_upstream_of_or_within ISO (PMID:11286504) MGI PMID:11286504 NCBI chrNW_004936524:2,726,795...2,730,049
Ensembl chrNW_004936524:2,726,749...2,730,564 		JBrowse link
glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkl phosphofructokinase, liver type involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8172601), (PMID:9287040) Ensembl
MGI		 PMID:8172601 PMID:9287040 GO_REF:0000107 NCBI chrNW_004936500:94,016...117,598
Ensembl chrNW_004936500:93,854...117,653 		JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17595219)
(PMID:2521854)		 Ensembl
MGI		 PMID:2521854 PMID:17595219 GO_REF:0000107 NCBI chrNW_004936512:6,006,247...6,031,939
Ensembl chrNW_004936512:6,006,046...6,032,899 		JBrowse link
glycoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 acts_upstream_of_or_within ISO (PMID:16431915) MGI PMID:16431915 NCBI chrNW_004936481:5,352,964...5,424,944
Ensembl chrNW_004936481:5,352,956...5,424,944 		JBrowse link
G Fbxo2 F-box protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15723043) Ensembl
MGI
TreeGrafter		 PMID:15723043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:521,235...526,151
Ensembl chrNW_004936474:521,123...526,959 		JBrowse link
G Fbxo27 F-box protein 27 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936661:1,931,036...1,936,548
Ensembl chrNW_004936661:1,931,025...1,936,526 		JBrowse link
G Fbxo44 F-box protein 44 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:526,191...531,825
Ensembl chrNW_004936474:525,862...532,152 		JBrowse link
G Fbxo6 F-box protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15723043) Ensembl
MGI
TreeGrafter		 PMID:15723043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:531,873...538,596
Ensembl chrNW_004936474:533,254...542,907 		JBrowse link
G Manba mannosidase beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:3447593) TreeGrafter
MGI		 PMID:3447593 GO_REF:0000118 NCBI chrNW_004936520:616,762...715,010
Ensembl chrNW_004936520:616,826...713,793 		JBrowse link
G Nccrp1 NCCRP1, F-box associated domain containing involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936661:2,057,664...2,060,519
Ensembl chrNW_004936661:2,057,664...2,060,526 		JBrowse link
G Neu2 neuraminidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:4,177,085...4,179,692
Ensembl chrNW_004936525:4,177,085...4,179,692 		JBrowse link
G Neu4 neuraminidase 4 involved_in ISO (PMID:15213228), (PMID:15847605)
(MGI:4361102|PMID:19506080), (MGI:5427293|PMID:22393058)		 UniProt PMID:15213228 PMID:15847605 PMID:19506080 PMID:22393058 MGI:4361102 MGI:5427293 NCBI chrNW_004936745:172,983...175,470 JBrowse link
G Ngly1 N-glycanase 1 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936473:17,243,763...17,294,609
Ensembl chrNW_004936473:17,239,966...17,294,791 		JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:22,197,625...22,288,941
Ensembl chrNW_004936473:22,197,321...22,288,941 		JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal2 hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,845,445...1,851,106
Ensembl chrNW_004936529:1,845,763...1,851,252 		JBrowse link
G Ids iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:62,966...88,844
Ensembl chrNW_004936513:62,993...88,774 		JBrowse link
G Idua alpha-L-iduronidase acts_upstream_of_or_within ISO (PMID:19751987)
(PMID:21873421)
(PMID:16979922), (PMID:22580166)
(PMID:19834056)		 RGD
MGI		 PMID:6138357 PMID:16979922 PMID:19751987 PMID:19834056 PMID:21873421 More... RGD:1599427 NCBI chrNW_004936477:22,200,471...22,215,473
Ensembl chrNW_004936477:22,200,474...22,215,077 		JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11278811) Ensembl
MGI		 PMID:11278811 GO_REF:0000107 NCBI chrNW_004936528:7,788,560...7,802,821
Ensembl chrNW_004936528:7,788,352...7,802,902 		JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:4,195,217...4,203,802
Ensembl chrNW_004936594:4,193,983...4,204,008 		JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha involved_in IEA
ISO		 Ensembl
RGD		 PMID:34320241 GO_REF:0000107 RGD:401976418 NCBI chrNW_004936813:474,938...484,753
Ensembl chrNW_004936813:474,949...484,760 		JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha acts_upstream_of_or_within ISO (PMID:10840053), (PMID:15629890)
(PMID:10841515), (PMID:11752062), (PMID:9122231)		 MGI PMID:9122231 PMID:10840053 PMID:10841515 PMID:11752062 PMID:15629890 NCBI chrNW_004936813:474,938...484,753
Ensembl chrNW_004936813:474,949...484,760 		JBrowse link
G Lct lactase involved_in ISO PMID:4752949 UniProt PMID:4752949 RGD:151356630 NCBI chrNW_004936469:40,064,822...40,108,423
Ensembl chrNW_004936469:40,064,822...40,107,447 		JBrowse link
G LOC101968782 cytosolic beta-glucosidase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936477:6,272,938...6,379,811
Ensembl chrNW_004936477:6,272,938...6,379,811 		JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:8,191,925...8,279,806
Ensembl chrNW_004936503:8,192,049...8,278,790 		JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936691:650,753...694,362
Ensembl chrNW_004936691:652,769...694,463 		JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:5560407) MGI PMID:5560407 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
G Prtfdc1 phosphoribosyl transferase domain containing 1 NOT|involved_in ISO (PMID:21054786) UniProt PMID:21054786 NCBI chrNW_004936484:568,056...650,820
Ensembl chrNW_004936484:566,543...650,896 		JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
GMP catabolic process to guanine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:5560407) MGI PMID:5560407 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
guanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in IEA InterPro
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936503:8,191,925...8,279,806
Ensembl chrNW_004936503:8,192,049...8,278,790 		JBrowse link
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
heme catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blvra biliverdin reductase A involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936478:18,811,452...18,850,594
Ensembl chrNW_004936478:18,833,172...18,852,839 		JBrowse link
G Blvrb biliverdin reductase B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:2,808,998...2,818,123
Ensembl chrNW_004936661:2,808,950...2,818,178 		JBrowse link
G Hmox1 heme oxygenase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:31571584) RGD
MGI
Ensembl
TreeGrafter		 PMID:15226268 PMID:31571584 GO_REF:0000107 GO_REF:0000118 RGD:1547877 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311 		JBrowse link
G Hmox2 heme oxygenase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936530:4,556,617...4,558,250
Ensembl chrNW_004936530:4,556,706...4,557,663 		JBrowse link
heme oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmox1 heme oxygenase 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:5,042,353...5,049,216
Ensembl chrNW_004936492:5,042,330...5,049,311 		JBrowse link
G Hmox2 heme oxygenase 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936530:4,556,617...4,558,250
Ensembl chrNW_004936530:4,556,706...4,557,663 		JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc1 glypican 1 involved_in ISO (PMID:12732622) UniProt PMID:12732622 NCBI chrNW_004936745:1,118,732...1,127,169 JBrowse link
G Gusb glucuronidase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,721,273...7,732,468
Ensembl chrNW_004936543:7,721,763...7,731,897 		JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936570:257,636...297,797
Ensembl chrNW_004936570:258,820...297,762 		JBrowse link
G Hpse heparanase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936738:1,308,350...1,341,421
Ensembl chrNW_004936738:1,308,345...1,343,145 		JBrowse link
G Ids iduronate 2-sulfatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936513:62,966...88,844
Ensembl chrNW_004936513:62,993...88,774 		JBrowse link
G Idua alpha-L-iduronidase involved_in ISO (PMID:25854773)
(PMID:15979918)		 MGI PMID:15979918 PMID:25854773 NCBI chrNW_004936477:22,200,471...22,215,473
Ensembl chrNW_004936477:22,200,474...22,215,077 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:4,195,217...4,203,802
Ensembl chrNW_004936594:4,193,983...4,204,008 		JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:21873421)
(PMID:19834056)
(PMID:19751987)		 MGI
Ensembl		 PMID:19751987 PMID:19834056 PMID:21873421 GO_REF:0000107 NCBI chrNW_004936477:22,200,471...22,215,473
Ensembl chrNW_004936477:22,200,474...22,215,077 		JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnmt histamine N-methyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:38,125,877...38,166,429
Ensembl chrNW_004936469:38,122,454...38,166,398 		JBrowse link
histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936507:12,033,804...12,049,210
Ensembl chrNW_004936507:12,033,797...12,050,118 		JBrowse link
G Hal histidine ammonia-lyase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8486363) InterPro
MGI
TreeGrafter
Ensembl		 PMID:8486363 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936507:12,058,583...12,078,159
Ensembl chrNW_004936507:12,058,698...12,078,214 		JBrowse link
G Hdc histidine decarboxylase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11478947) Ensembl
MGI
TreeGrafter		 PMID:11478947 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:12,303,802...12,324,613
Ensembl chrNW_004936471:12,304,130...12,324,570 		JBrowse link
G LOC101964451 urocanate hydratase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936898:583,802...600,305
Ensembl chrNW_004936898:584,157...600,305 		JBrowse link
histidine catabolic process to glutamate and formamide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 NCBI chrNW_004936507:12,033,804...12,049,210
Ensembl chrNW_004936507:12,033,797...12,050,118 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936778:375,800...390,764
Ensembl chrNW_004936778:375,800...390,554 		JBrowse link
G Hal histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936507:12,058,583...12,078,159
Ensembl chrNW_004936507:12,058,698...12,078,214 		JBrowse link
G LOC101964451 urocanate hydratase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936898:583,802...600,305
Ensembl chrNW_004936898:584,157...600,305 		JBrowse link
histidine catabolic process to glutamate and formate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd1 amidohydrolase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936507:12,033,804...12,049,210
Ensembl chrNW_004936507:12,033,797...12,050,118 		JBrowse link
G Ftcd formimidoyltransferase cyclodeaminase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936778:375,800...390,764
Ensembl chrNW_004936778:375,800...390,554 		JBrowse link
G Hal histidine ammonia-lyase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936507:12,058,583...12,078,159
Ensembl chrNW_004936507:12,058,698...12,078,214 		JBrowse link
G LOC101964451 urocanate hydratase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936898:583,802...600,305
Ensembl chrNW_004936898:584,157...600,305 		JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blmh bleomycin hydrolase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936538:6,251,602...6,298,281
Ensembl chrNW_004936538:6,250,575...6,298,373 		JBrowse link
G Cbs cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:976,043...1,003,559
Ensembl chrNW_004936500:987,128...1,003,388 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936643:379,790...410,034
Ensembl chrNW_004936643:380,968...409,464 		JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097 		JBrowse link
G Cd44 CD44 molecule (IN blood group) involved_in ISO (PMID:17170110)
(PMID:26528478)		 UniProt
MGI		 PMID:17170110 PMID:26528478 NCBI chrNW_004936533:2,949,026...3,033,166 JBrowse link
G Cemip cell migration inducing hyaluronidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:19,721,256...19,799,371
Ensembl chrNW_004936483:19,724,605...19,799,361 		JBrowse link
G Cemip2 cell migration inducing hyaluronidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:7,750,353...7,826,408
Ensembl chrNW_004936503:7,750,352...7,825,554 		JBrowse link
G Gusb glucuronidase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:7,721,273...7,732,468
Ensembl chrNW_004936543:7,721,763...7,731,897 		JBrowse link
G Hexa hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:31,712,485...31,738,273
Ensembl chrNW_004936471:31,709,491...31,738,245 		JBrowse link
G Hexb hexosaminidase subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:1,918,482...1,943,665
Ensembl chrNW_004936549:1,917,327...1,943,691 		JBrowse link
G Hmmr hyaluronan mediated motility receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936515:570,112...599,400
Ensembl chrNW_004936515:571,139...600,132 		JBrowse link
G Hyal1 hyaluronidase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:1,838,212...1,842,399
Ensembl chrNW_004936529:1,838,676...1,841,188 		JBrowse link
G Hyal2 hyaluronidase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:1,845,445...1,851,106
Ensembl chrNW_004936529:1,845,763...1,851,252 		JBrowse link
G Hyal3 hyaluronidase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:1,831,639...1,837,314
Ensembl chrNW_004936529:1,831,254...1,837,314 		JBrowse link
G Hyal4 hyaluronidase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936605:1,645,204...1,666,510
Ensembl chrNW_004936605:1,645,204...1,666,510 		JBrowse link
G LOC101976844 hyaluronidase-1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936605:1,670,237...1,679,080 JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936528:7,788,560...7,802,821
Ensembl chrNW_004936528:7,788,352...7,802,902 		JBrowse link
G Spam1 sperm adhesion molecule 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936605:1,595,969...1,602,236
Ensembl chrNW_004936605:1,595,481...1,602,236 		JBrowse link
G Stab2 stabilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:10,678,074...10,817,870
Ensembl chrNW_004936492:10,678,115...10,833,963 		JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISS
IEA		 AgBase
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936661:3,742,080...3,758,266
Ensembl chrNW_004936661:3,742,066...3,758,272 		JBrowse link
hypoxanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO
IEA		 RGD
Ensembl		 PMID:232638 GO_REF:0000107 RGD:13210503 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
IMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:430,274...432,027
Ensembl chrNW_004936594:430,506...432,095 		JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:21,535,197...21,542,417
Ensembl chrNW_004936474:21,535,467...21,542,588 		JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:21873433) MGI PMID:21873433 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Pnp purine nucleoside phosphorylase involved_in
acts_upstream_of_or_within		 ISO (PMID:23438750)
(PMID:16964310)		 UniProt
MGI		 PMID:16964310 PMID:23438750 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
insulin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsd cathepsin D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:680,798...690,959
Ensembl chrNW_004936816:680,798...691,039 		JBrowse link
G Ide insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:2,230,477...2,318,562
Ensembl chrNW_004936601:2,230,283...2,318,752 		JBrowse link
G LOC101954488 CEA cell adhesion molecule 1 involved_in ISO PMID:11850617
(MGI:3819735|PMID:18544705)		 UniProt PMID:11850617 PMID:18544705 MGI:3819735 RGD:734645 NCBI chrNW_004936706:37,480...53,306 JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-CoA dehydrogenase short/branched chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:11,668,099...11,707,946
Ensembl chrNW_004936486:11,668,099...11,711,786 		JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:594,647...626,016
Ensembl chrNW_004936551:591,695...626,056 		JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17767905) RGD
MGI
Ensembl		 PMID:11733007 PMID:17767905 GO_REF:0000107 RGD:1582175 NCBI chrNW_004936664:2,865,804...2,890,038
Ensembl chrNW_004936664:2,864,231...2,890,018 		JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004936501:13,467,603...13,471,810
Ensembl chrNW_004936501:13,467,305...13,471,858 		JBrowse link
G Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:399,743...402,200
Ensembl chrNW_004936751:399,701...402,344 		JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpa inosine triphosphatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20081199) Ensembl
MGI		 PMID:20081199 GO_REF:0000107 NCBI chrNW_004936485:15,499,688...15,511,992
Ensembl chrNW_004936485:15,497,822...15,511,992 		JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gns glucosamine (N-acetyl)-6-sulfatase ISO RGD PMID:3161730 RGD:1600571 NCBI chrNW_004936545:2,974,627...3,010,586
Ensembl chrNW_004936545:2,971,870...3,010,566 		JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936745:856,915...867,477
Ensembl chrNW_004936745:857,102...867,477 		JBrowse link
G Gpt glutamic--pyruvic transaminase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936470:7,765,810...7,770,837
Ensembl chrNW_004936470:7,765,703...7,768,465 		JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936475:262,558...299,766
Ensembl chrNW_004936475:262,920...297,459 		JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine--glyoxylate aminotransferase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936518:6,508,928...6,544,324
Ensembl chrNW_004936518:6,508,928...6,544,146 		JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936745:856,915...867,477
Ensembl chrNW_004936745:857,102...867,477 		JBrowse link
G Cbs cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:976,043...1,003,559
Ensembl chrNW_004936500:987,128...1,003,388 		JBrowse link
G Cdo1 cysteine dioxygenase type 1 involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:16611641 GO_REF:0000118 RGD:2301357 NCBI chrNW_004936742:981,863...993,271
Ensembl chrNW_004936742:979,368...993,257 		JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chrNW_004936512:10,447,457...10,475,231
Ensembl chrNW_004936512:10,447,461...10,474,985 		JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chrNW_004936512:10,447,457...10,475,231
Ensembl chrNW_004936512:10,447,461...10,474,985 		JBrowse link
L-kynurenine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kyat3 kynurenine aminotransferase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936732:77,427...125,816 JBrowse link
G Kynu kynureninase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936469:33,632,885...33,805,158
Ensembl chrNW_004936469:33,632,892...33,734,433 		JBrowse link
L-leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad9 acyl-CoA dehydrogenase family member 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936798:83,952...106,381
Ensembl chrNW_004936798:90,584...106,041 		JBrowse link
G Acadl acyl-CoA dehydrogenase long chain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936845:66,674...96,248
Ensembl chrNW_004936845:66,241...96,249 		JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004936501:13,467,603...13,471,810
Ensembl chrNW_004936501:13,467,305...13,471,858 		JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:8,955,216...8,971,078
Ensembl chrNW_004936474:8,954,379...8,971,132 		JBrowse link
G Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936476:5,600,154...5,735,721
Ensembl chrNW_004936476:5,600,278...5,733,226 		JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004936471:3,871,152...3,883,521
Ensembl chrNW_004936471:3,871,148...3,885,241 		JBrowse link
G Mccc2 methylcrotonyl-CoA carboxylase subunit 2 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004936549:4,760,073...4,830,190
Ensembl chrNW_004936549:4,755,546...4,830,242 		JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10567240) Ensembl
MGI		 PMID:10567240 GO_REF:0000107 NCBI chrNW_004936605:3,135,977...3,190,956
Ensembl chrNW_004936605:3,136,018...3,190,948 		JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:5,218,097...5,252,579
Ensembl chrNW_004936538:5,228,418...5,242,668 		JBrowse link
L-lysine catabolic process to acetyl-CoA via saccharopine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936605:3,135,977...3,190,956
Ensembl chrNW_004936605:3,136,018...3,190,948 		JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936488:4,038,985...4,061,071
Ensembl chrNW_004936488:4,038,985...4,061,087 		JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936471:38,140,324...38,174,472
Ensembl chrNW_004936471:38,140,273...38,174,702 		JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004936488:6,141,913...6,153,591
Ensembl chrNW_004936488:6,141,317...6,154,075 		JBrowse link
G Hgd homogentisate 1,2-dioxygenase involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004936536:7,314,548...7,359,426
Ensembl chrNW_004936536:7,314,754...7,352,222 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,674,612...3,715,036
Ensembl chrNW_004936664:3,675,805...3,686,262 		JBrowse link
G Pah phenylalanine hydroxylase involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 NCBI chrNW_004936492:11,342,566...11,412,323
Ensembl chrNW_004936492:11,342,518...11,412,209 		JBrowse link
G Qdpr quinoid dihydropteridine reductase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:4155291 GO_REF:0000118 RGD:5128604 NCBI chrNW_004936477:10,687,328...10,708,015
Ensembl chrNW_004936477:10,687,276...10,708,031 		JBrowse link
G Tat tyrosine aminotransferase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936475:22,190,282...22,199,398
Ensembl chrNW_004936475:22,189,728...22,199,672 		JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:976,043...1,003,559
Ensembl chrNW_004936500:987,128...1,003,388 		JBrowse link
G Sds serine dehydratase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936668:3,208,810...3,213,465
Ensembl chrNW_004936668:3,206,458...3,215,617 		JBrowse link
G Sdsl serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936668:3,222,894...3,232,736
Ensembl chrNW_004936668:3,222,904...3,232,626 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936741:1,849,239...1,877,724
Ensembl chrNW_004936741:1,849,609...1,877,727 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:1,422,844...1,427,929
Ensembl chrNW_004936646:1,422,817...1,429,037 		JBrowse link
leukotriene D4 catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpep1 dipeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:379,112...384,711
Ensembl chrNW_004936641:379,083...391,918 		JBrowse link
G LOC101963479 dipeptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,333,523...18,339,248
Ensembl chrNW_004936475:18,333,579...18,348,640 		JBrowse link
lipoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apob apolipoprotein B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15863839) Ensembl
MGI		 PMID:15863839 GO_REF:0000107 NCBI chrNW_004936493:10,509,118...10,549,144
Ensembl chrNW_004936493:10,509,118...10,549,144 		JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (PMID:17720994) MGI PMID:17720994 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Atm ATM serine/threonine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15863839) Ensembl
MGI		 PMID:15863839 GO_REF:0000107 NCBI chrNW_004936551:359,134...534,672
Ensembl chrNW_004936551:359,362...532,211 		JBrowse link
G Ctsd cathepsin D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:680,798...690,959
Ensembl chrNW_004936816:680,798...691,039 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15805190), (PMID:9788969)
(PMID:15741654)		 Ensembl
MGI		 PMID:9788969 PMID:15741654 PMID:15805190 GO_REF:0000107 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G LOC101960702 lysosomal acid lipase/cholesteryl ester hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936601:4,975,296...5,008,938
Ensembl chrNW_004936601:4,975,211...5,008,962 		JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:1,112,021...1,191,190
Ensembl chrNW_004936623:1,112,338...1,191,064 		JBrowse link
low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917 		JBrowse link
lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936605:3,135,977...3,190,956
Ensembl chrNW_004936605:3,136,018...3,190,948 		JBrowse link
lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap5z1 adaptor related protein complex 5 subunit zeta 1 acts_upstream_of_or_within ISO (PMID:30930081) MGI PMID:30930081 NCBI chrNW_004936765:1,112,333...1,123,244
Ensembl chrNW_004936765:1,111,882...1,123,316 		JBrowse link
G Ccdc115 coiled-coil domain containing 115 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:41,083,713...41,087,106
Ensembl chrNW_004936469:41,083,738...41,087,087 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,955,334...11,967,338
Ensembl chrNW_004936501:11,955,184...11,967,436 		JBrowse link
G Dpp7 dipeptidyl peptidase 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28728022) Ensembl
MGI		 PMID:28728022 GO_REF:0000107 NCBI chrNW_004936669:868,889...872,982
Ensembl chrNW_004936669:869,067...872,885 		JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO (PMID:28728022) MGI PMID:28728022 NCBI chrNW_004936541:793,548...800,271
Ensembl chrNW_004936541:793,523...800,217 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:9,584,221...9,622,330
Ensembl chrNW_004936479:9,584,221...9,610,420 		JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of ISO (PMID:25592972), (PMID:26467158) MGI PMID:25592972 PMID:26467158 NCBI chrNW_004936492:2,144,775...2,149,344
Ensembl chrNW_004936492:2,144,732...2,186,871 		JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (PMID:12813057) MGI PMID:12813057 NCBI chrNW_004936521:6,975,844...7,009,460
Ensembl chrNW_004936521:6,975,770...7,009,136 		JBrowse link
G Slc17a9 solute carrier family 17 member 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:7447186|PMID:24962569) UniProt
Ensembl		 PMID:24962569 GO_REF:0000107 MGI:7447186 NCBI chrNW_004936514:10,435,261...10,450,976
Ensembl chrNW_004936514:10,435,275...10,450,960 		JBrowse link
G Tmem106b transmembrane protein 106B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28728022) Ensembl
MGI		 PMID:28728022 GO_REF:0000107 NCBI chrNW_004936761:1,663,099...1,689,580
Ensembl chrNW_004936761:1,662,738...1,685,156 		JBrowse link
G Tmem199 transmembrane protein 199 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,512,866...4,517,404
Ensembl chrNW_004936538:4,511,941...4,517,498 		JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28728022) Ensembl
MGI		 PMID:28728022 GO_REF:0000107 NCBI chrNW_004936842:669,869...676,706
Ensembl chrNW_004936842:669,863...676,720 		JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:12,606,019...12,857,807
Ensembl chrNW_004936503:12,606,014...12,858,005 		JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlycd malonyl-CoA decarboxylase involved_in ISO (PMID:10417274), (PMID:10455107), (PMID:15003260)
(MGI:5501374|PMID:23746352)		 UniProt PMID:10417274 PMID:10455107 PMID:15003260 PMID:23746352 MGI:5501374 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:26,079,298...26,095,466
Ensembl chrNW_004936475:26,079,275...26,089,889 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,159,654...2,161,657 JBrowse link
mannoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,486,617...4,516,379
Ensembl chrNW_004936577:4,486,885...4,513,555 		JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:5,352,964...5,424,944
Ensembl chrNW_004936481:5,352,956...5,424,944 		JBrowse link
G LOC101973161 ER degradation-enhancing alpha-mannosidase-like protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,578,267...5,605,512
Ensembl chrNW_004936561:5,578,236...5,605,810 		JBrowse link
G Man1b1 mannosidase alpha class 1B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:855,349...867,763
Ensembl chrNW_004936669:855,340...871,516 		JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:1,112,021...1,191,190
Ensembl chrNW_004936623:1,112,338...1,191,064 		JBrowse link
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:26,079,298...26,095,466
Ensembl chrNW_004936475:26,079,275...26,089,889 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,159,654...2,161,657 JBrowse link
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hm13 histocompatibility minor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:18,539,873...18,583,605
Ensembl chrNW_004936485:18,539,826...18,583,813 		JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936525:8,906,848...9,028,792
Ensembl chrNW_004936525:8,906,631...9,004,372 		JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936716:126,628...142,986
Ensembl chrNW_004936716:126,574...143,155 		JBrowse link
mitochondrial protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:4,553,758...4,755,126
Ensembl chrNW_004936564:4,553,732...4,757,616 		JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:18,449,371...18,460,435
Ensembl chrNW_004936486:18,448,494...18,455,927 		JBrowse link
G Bnip3l BCL2 interacting protein 3 like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936757:499,485...523,494
Ensembl chrNW_004936757:499,147...523,541 		JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936755:665,416...767,597
Ensembl chrNW_004936755:712,278...767,728 		JBrowse link
G Spata18 spermatogenesis associated 18 involved_in ISO (PMID:21264221), (PMID:21264228) UniProt PMID:21264221 PMID:21264228 NCBI chrNW_004936482:15,178,667...15,262,897 JBrowse link
G Yme1l1 YME1 like 1 ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936484:2,306,937...2,352,671
Ensembl chrNW_004936484:2,306,760...2,353,507 		JBrowse link
mitochondrial protein quality control term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 involved_in ISO (PMID:26504172), (PMID:30683687), (PMID:34718584) UniProt PMID:26504172 PMID:30683687 PMID:34718584 NCBI chrNW_004936626:150,953...189,980
Ensembl chrNW_004936626:150,974...189,218 		JBrowse link
G Oxa1l OXA1L mitochondrial inner membrane protein involved_in ISO (PMID:38199007) UniProt PMID:38199007 NCBI chrNW_004936722:1,524,116...1,528,659 JBrowse link
G Tmem126a transmembrane protein 126A involved_in ISO (PMID:38199007) UniProt PMID:38199007 NCBI chrNW_004936498:13,538,565...13,545,338 JBrowse link
modification-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Isg15 ISG15 ubiquitin like modifier acts_upstream_of_or_within ISO (PMID:15485925) MGI PMID:15485925 NCBI chrNW_004936737:2,043,383...2,044,761 JBrowse link
G LOC101966763 ubiquitin-40S ribosomal protein S27a-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:3,763,497...3,764,024 JBrowse link
G Nedd8 NEDD8 ubiquitin like modifier involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:331,116...338,496
Ensembl chrNW_004936722:331,136...338,496 		JBrowse link
G Rps27a ribosomal protein S27a involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:1,630,172...1,632,839
Ensembl chrNW_004936491:1,630,128...1,635,952 		JBrowse link
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:2,706,990...2,709,957
Ensembl chrNW_004936596:2,706,994...2,719,846 		JBrowse link
G Uba7 ubiquitin like modifier activating enzyme 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15485925) Ensembl
MGI		 PMID:15485925 GO_REF:0000107 NCBI chrNW_004936529:1,412,196...1,421,216
Ensembl chrNW_004936529:1,412,194...1,421,197 		JBrowse link
G Ube2l6 ubiquitin conjugating enzyme E2 L6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15485925) Ensembl
MGI		 PMID:15485925 GO_REF:0000107 NCBI chrNW_004936581:4,943,742...4,954,281
Ensembl chrNW_004936581:4,943,887...4,954,241 		JBrowse link
N(omega),N(omega)-dimethyl-L-arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine--glyoxylate aminotransferase 2 involved_in ISO PMID:2123486 UniProt PMID:2123486 RGD:401901222 NCBI chrNW_004936518:6,508,928...6,544,324
Ensembl chrNW_004936518:6,508,928...6,544,146 		JBrowse link
N-acetylneuraminate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936504:12,181,544...12,192,596 JBrowse link
G LOC101968793 glucosamine-6-phosphate isomerase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936482:11,382,358...11,423,823
Ensembl chrNW_004936482:11,397,322...11,423,885
Ensembl chrNW_004936482:11,397,322...11,423,885 		JBrowse link
G Npl N-acetylneuraminate pyruvate lyase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936481:6,942,128...6,977,042
Ensembl chrNW_004936481:6,942,282...6,972,775 		JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936694:1,444,819...1,487,628
Ensembl chrNW_004936694:1,444,880...1,488,265
Ensembl chrNW_004936694:1,444,880...1,488,265 		JBrowse link
G Renbp renin binding protein involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936809:817,392...823,926
Ensembl chrNW_004936809:817,355...823,941 		JBrowse link
NAD catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt12 nudix hydrolase 12 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12790796) MGI
TreeGrafter
Ensembl		 PMID:12790796 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936523:964,858...979,118
Ensembl chrNW_004936523:964,813...979,250 		JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936538:4,526,713...4,546,861
Ensembl chrNW_004936538:4,526,582...4,545,896 		JBrowse link
G Tigd7 tigger transposable element derived 7 involved_in ISO (MGI:5426136|PMID:11011142) UniProt PMID:11011142 MGI:5426136 NCBI chrNW_004936694:938,233...943,347
Ensembl chrNW_004936694:941,533...943,182 		JBrowse link
NADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt12 nudix hydrolase 12 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12790796) MGI
TreeGrafter
Ensembl		 PMID:12790796 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936523:964,858...979,118
Ensembl chrNW_004936523:964,813...979,250 		JBrowse link
G Nudt13 nudix hydrolase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:5,948,517...5,965,695
Ensembl chrNW_004936521:5,947,521...5,965,715 		JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:944,825...1,039,920
Ensembl chrNW_004936567:950,797...993,245 		JBrowse link
negative regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsa cathepsin A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936514:7,131,263...7,136,775
Ensembl chrNW_004936514:7,130,848...7,136,536 		JBrowse link
G Snca synuclein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936685:2,077,017...2,175,298
Ensembl chrNW_004936685:2,076,651...2,175,338 		JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISO (MGI:3813160|PMID:18606867) UniProt PMID:18606867 MGI:3813160 NCBI chrNW_004936498:6,213,583...6,237,273 JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:1,599,453...1,616,480
Ensembl chrNW_004936588:1,598,164...1,616,599 		JBrowse link
G Svip small VCP interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:3,452,781...3,459,161
Ensembl chrNW_004936654:3,453,043...3,459,219 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:584,519...587,863
Ensembl chrNW_004936581:584,315...591,612 		JBrowse link
G Ubxn2a UBX domain protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:7,969,271...7,978,537
Ensembl chrNW_004936493:7,971,960...7,985,314 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:640,331...675,703
Ensembl chrNW_004936550:635,963...675,832 		JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936505:8,613,588...8,683,560
Ensembl chrNW_004936505:8,548,677...8,681,232 		JBrowse link
negative regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,033,854...3,046,364
Ensembl chrNW_004936599:3,029,202...3,046,385 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:857,483...875,527
Ensembl chrNW_004936641:810,074...875,534 		JBrowse link
G Ddit4 DNA damage inducible transcript 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20176937) Ensembl
MGI		 PMID:20176937 GO_REF:0000107 NCBI chrNW_004936521:6,646,864...6,648,982
Ensembl chrNW_004936521:6,646,797...6,648,983 		JBrowse link
G Fbp1 fructose-bisphosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936626:3,555,835...3,581,651
Ensembl chrNW_004936626:3,555,762...3,581,659 		JBrowse link
G Flcn folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936741:881,150...901,296
Ensembl chrNW_004936741:880,736...901,468 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:5,684,660...5,694,779
Ensembl chrNW_004936538:5,684,644...5,695,043 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936745:1,730,743...1,942,071
Ensembl chrNW_004936745:1,730,694...1,942,074 		JBrowse link
G Ier3 immediate early response 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19096392) Ensembl
MGI		 PMID:19096392 GO_REF:0000107 NCBI chrNW_004936837:401,475...402,769
Ensembl chrNW_004936837:401,524...402,741 		JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (PMID:26219591) MGI PMID:26219591 NCBI chrNW_004936562:1,622,341...1,644,191 JBrowse link
G Myog myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chrNW_004936567:1,507,042...1,509,814
Ensembl chrNW_004936567:1,507,042...1,509,815 		JBrowse link
G Ncor1 nuclear receptor corepressor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936821:382,756...538,254
Ensembl chrNW_004936821:382,383...536,223 		JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,998,064...11,999,431
Ensembl chrNW_004936501:11,997,834...11,999,709 		JBrowse link
G Ppara peroxisome proliferator activated receptor alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936629:3,672,445...3,725,645
Ensembl chrNW_004936629:3,672,460...3,725,626 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:22343369 RGD:7242186 NCBI chrNW_004936477:4,881,230...5,488,208
Ensembl chrNW_004936477:5,199,881...5,488,226 		JBrowse link
G Sik2 salt inducible kinase 2 involved_in ISO (PMID:21084751) MGI PMID:21084751 NCBI chrNW_004936612:2,691,729...2,810,975
Ensembl chrNW_004936612:2,691,524...2,810,981 		JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22891351) Ensembl
MGI		 PMID:22891351 GO_REF:0000107 NCBI chrNW_004936490:17,119,189...17,178,402
Ensembl chrNW_004936490:17,117,290...17,178,402 		JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20935145) Ensembl
MGI
TreeGrafter		 PMID:20935145 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936606:4,518,525...4,540,109
Ensembl chrNW_004936606:4,518,584...4,540,114 		JBrowse link
G Trim63 tripartite motif containing 63 involved_in ISO (PMID:34244144) FlyBase PMID:34244144 NCBI chrNW_004936474:10,598,571...10,610,197
Ensembl chrNW_004936474:10,598,561...10,633,001 		JBrowse link
negative regulation of glycolytic process through fructose-6-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pfkfb1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936751:1,753,627...1,806,315
Ensembl chrNW_004936751:1,753,627...1,806,294 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936647:1,031,118...1,055,961
Ensembl chrNW_004936647:1,031,119...1,055,149 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:2,750,015...2,765,914
Ensembl chrNW_004936659:2,750,537...2,765,753 		JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,353,905...1,464,636
Ensembl chrNW_004936608:1,353,897...1,464,636 		JBrowse link
G Slc4a1 solute carrier family 4 member 1 (Diego blood group) involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18698006) Ensembl
MGI		 PMID:18698006 GO_REF:0000107 NCBI chrNW_004936541:718,577...727,420
Ensembl chrNW_004936541:718,577...729,876 		JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:21,274,112...21,329,286
Ensembl chrNW_004936471:21,274,027...21,329,503 		JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,136,099...16,147,945
Ensembl chrNW_004936483:16,136,099...16,144,635 		JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:44,917,462...44,981,773
Ensembl chrNW_004936470:44,914,011...44,982,065 		JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (PMID:25592972), (PMID:26467158) MGI PMID:25592972 PMID:26467158 NCBI chrNW_004936492:2,144,775...2,149,344
Ensembl chrNW_004936492:2,144,732...2,186,871 		JBrowse link
G Usp8 ubiquitin specific peptidase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:12,463,189...12,524,148
Ensembl chrNW_004936471:12,463,120...12,520,674 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:50,476...77,797
Ensembl chrNW_004936475:50,321...78,097 		JBrowse link
negative regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il10 interleukin 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,834,874...5,838,502
Ensembl chrNW_004936557:5,834,874...5,838,502 		JBrowse link
G Lrig2 leucine rich repeats and immunoglobulin like domains 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26651291) Ensembl
MGI		 PMID:26651291 GO_REF:0000107 NCBI chrNW_004936690:1,591,741...1,642,183
Ensembl chrNW_004936690:1,591,965...1,641,544 		JBrowse link
G Ptpn3 protein tyrosine phosphatase non-receptor type 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:3,436,114...3,547,316
Ensembl chrNW_004936559:3,436,651...3,547,275 		JBrowse link
G Timp1 TIMP metallopeptidase inhibitor 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936502:13,345,936...13,350,170
Ensembl chrNW_004936502:13,345,832...13,350,248 		JBrowse link
G Timp2 TIMP metallopeptidase inhibitor 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:3,232,433...3,244,241
Ensembl chrNW_004936594:3,232,355...3,244,241 		JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:6,996,627...7,046,137
Ensembl chrNW_004936492:6,996,613...7,046,190 		JBrowse link
G Timp4 TIMP metallopeptidase inhibitor 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936602:1,488,993...1,496,108
Ensembl chrNW_004936602:1,489,545...1,495,478 		JBrowse link
negative regulation of ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oaz1 ornithine decarboxylase antizyme 1 ISO RGD PMID:8166639 RGD:401851045 NCBI chrNW_004936588:1,356,769...1,361,037
Ensembl chrNW_004936588:1,356,769...1,361,037 		JBrowse link
negative regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoc1 apolipoprotein C1 involved_in ISO (PMID:2302419) BHF-UCL PMID:2302419 NCBI chrNW_004936706:1,519,248...1,520,102 JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:226,481...237,258
Ensembl chrNW_004936559:226,424...241,684 		JBrowse link
G F8a1 coagulation factor VIII associated 1 involved_in ISO (PMID:27815841) UniProt PMID:27815841 NCBI chrNW_004936927:234,162...236,881 JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:24,238,262...24,249,249
Ensembl chrNW_004936475:24,238,209...24,249,557 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:15,830,459...15,836,994
Ensembl chrNW_004936476:15,830,459...15,835,535 		JBrowse link
G Lamp3 lysosomal associated membrane protein 3 involved_in ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chrNW_004936566:365,326...394,985 JBrowse link
G LOC101974307 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (PMID:25683716) MGI PMID:25683716 NCBI chrNW_004936595:3,523,789...3,537,933
Ensembl chrNW_004936595:3,523,779...3,538,150 		JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:18,966,239...19,016,829
Ensembl chrNW_004936469:18,962,655...19,017,100 		JBrowse link
G Ophn1 oligophrenin 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936635:6,966...243,209
Ensembl chrNW_004936635:6,923...244,408 		JBrowse link
G Prkcg protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936994:87,525...105,125
Ensembl chrNW_004936994:87,519...105,134 		JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,266,778...9,294,173
Ensembl chrNW_004936475:9,268,337...9,294,163 		JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:17,485,600...17,517,642
Ensembl chrNW_004936485:17,485,602...17,517,696 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in ISO (MGI:5614537|PMID:25088257) ParkinsonsUK-UCL PMID:25088257 MGI:5614537 NCBI chrNW_004936529:814,649...826,008
Ensembl chrNW_004936529:813,951...826,014 		JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:1,573,237...1,578,257
Ensembl chrNW_004936621:1,574,033...1,575,376 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,866,235...1,885,266
Ensembl chrNW_004936727:1,873,413...1,885,366 		JBrowse link
G Camlg calcium modulating ligand involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:1,979,029...1,988,281
Ensembl chrNW_004936597:1,978,974...1,989,851 		JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,341,455...6,356,677
Ensembl chrNW_004936555:6,341,390...6,356,668 		JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO (PMID:24949970) MGI PMID:24949970 NCBI chrNW_004936530:9,089,478...9,264,563
Ensembl chrNW_004936530:9,089,476...9,264,592 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004936485:17,966,993...18,021,191 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004936475:10,030,408...10,073,576
Ensembl chrNW_004936475:10,033,717...10,075,511 		JBrowse link
G Csnk2b casein kinase 2 beta involved_in ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004936727:1,857,596...1,862,551
Ensembl chrNW_004936727:1,857,596...1,862,002 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:15,516,348...15,526,380
Ensembl chrNW_004936485:15,516,302...15,526,376 		JBrowse link
G Eif3h eukaryotic translation initiation factor 3 subunit H involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:29,509,154...29,606,124
Ensembl chrNW_004936470:29,509,151...29,606,124 		JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936473:397,140...1,424,805
Ensembl chrNW_004936473:676,237...1,424,506 		JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:3,019,829...3,030,280
Ensembl chrNW_004936659:3,012,012...3,026,883 		JBrowse link
G Hfe homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:15,830,459...15,836,994
Ensembl chrNW_004936476:15,830,459...15,835,535 		JBrowse link
G Klhl40 kelch like family member 40 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24960163) TreeGrafter
MGI		 PMID:24960163 GO_REF:0000118 NCBI chrNW_004936695:2,417,938...2,424,622
Ensembl chrNW_004936695:2,414,573...2,424,702 		JBrowse link
G LOC101960348 E3 ubiquitin-protein ligase TRIM39 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936837:88,387...104,420
Ensembl chrNW_004936837:105,575...107,719
Ensembl chrNW_004936837:105,575...107,719 		JBrowse link
G Map1a microtubule associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:5703671 NCBI chrNW_004936471:6,685,565...6,706,860
Ensembl chrNW_004936471:6,685,728...6,705,477 		JBrowse link
G Mtm1 myotubularin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23695157) Ensembl
MGI		 PMID:23695157 GO_REF:0000107 NCBI chrNW_004936714:1,792,893...1,870,338
Ensembl chrNW_004936714:1,792,845...1,870,389 		JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:1,743,205...1,765,466
Ensembl chrNW_004936475:1,741,528...1,765,491 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,334,487...1,343,867
Ensembl chrNW_004936664:1,334,510...1,342,321 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817 		JBrowse link
G Pbk PDZ binding kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21715333) Ensembl
MGI		 PMID:21715333 GO_REF:0000107 NCBI chrNW_004936675:704,001...722,769
Ensembl chrNW_004936675:704,516...722,755 		JBrowse link
G Phf20l1 PHD finger protein 20 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:16,406,293...16,475,384
Ensembl chrNW_004936470:16,406,653...16,475,586 		JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (MGI:5897550|PMID:21804542) UniProt PMID:21804542 MGI:5897550 NCBI chrNW_004936474:8,855,782...8,858,287 JBrowse link
G Rybp RING1 and YY1 binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:3,618,715...3,693,007
Ensembl chrNW_004936603:3,618,795...3,690,410 		JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of_or_within ISO (PMID:17981124) MGI PMID:17981124 NCBI chrNW_004936512:5,932,594...5,989,819
Ensembl chrNW_004936512:5,937,814...5,989,855 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16611981) Ensembl
MGI		 PMID:16611981 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22285184) Ensembl
MGI		 PMID:22285184 GO_REF:0000107 NCBI chrNW_004936596:1,257,723...1,407,358
Ensembl chrNW_004936596:1,255,054...1,408,038 		JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004936480:252,435...256,609
Ensembl chrNW_004936480:252,435...256,609 		JBrowse link
G Tlk2 tousled like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:3,303,563...3,422,093
Ensembl chrNW_004936541:3,302,872...3,423,058 		JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31537781) Ensembl
MGI		 PMID:31537781 GO_REF:0000107 NCBI chrNW_004936542:3,567,469...3,571,393
Ensembl chrNW_004936542:3,566,876...3,571,504 		JBrowse link
G Ubxn1 UBX domain protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936581:584,519...587,863
Ensembl chrNW_004936581:584,315...591,612 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936638:1,242,950...1,289,376
Ensembl chrNW_004936638:1,242,893...1,290,512 		JBrowse link
G Usp26 ubiquitin specific peptidase 26 involved_in ISO (PMID:28839133)
(MGI:5926846|PMID:28839133)		 UniProt PMID:28839133 MGI:5926846 NCBI chrNW_004936691:1,913,416...1,916,214 JBrowse link
G Usp38 ubiquitin specific peptidase 38 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936535:5,146,327...5,178,184
Ensembl chrNW_004936535:5,146,327...5,178,205 		JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936530:7,693,681...7,724,215
Ensembl chrNW_004936530:7,694,379...7,724,684 		JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:7,649,808...7,732,731
Ensembl chrNW_004936502:7,649,842...7,735,382 		JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936613:2,793,706...2,862,984
Ensembl chrNW_004936613:2,794,732...2,865,913 		JBrowse link
negative regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 acts_upstream_of_or_within ISO (PMID:18374643) MGI PMID:18374643 NCBI chrNW_004936646:1,865,154...1,881,614
Ensembl chrNW_004936646:1,865,395...1,876,453 		JBrowse link
G Atraid all-trans retinoic acid induced differentiation factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:5,333,151...5,338,157
Ensembl chrNW_004936493:5,333,169...5,338,116 		JBrowse link
G Azin1 antizyme inhibitor 1 involved_in ISO
IEA		 downregulates antizyme degradation of ODC RGD
TreeGrafter
Ensembl		 PMID:8631929 GO_REF:0000107 GO_REF:0000118 RGD:633334 NCBI chrNW_004936470:40,801,943...40,832,543
Ensembl chrNW_004936470:40,801,943...40,834,003 		JBrowse link
G Azin2 antizyme inhibitor 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:15,941,655...15,973,481
Ensembl chrNW_004936474:15,941,620...15,973,745 		JBrowse link
G Banp BTG3 associated nuclear protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15701641) TreeGrafter
MGI		 PMID:15701641 GO_REF:0000118 NCBI chrNW_004936641:1,386,592...1,472,750
Ensembl chrNW_004936641:1,387,102...1,472,803 		JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in ISO (PMID:15750306) AgBase PMID:15750306 NCBI chrNW_004936646:379,849...385,648
Ensembl chrNW_004936646:379,842...385,877 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,345,443...13,355,841
Ensembl chrNW_004936490:13,345,443...13,355,841 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174 		JBrowse link
G Dedd death effector domain containing involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21135503) Ensembl
MGI		 PMID:21135503 GO_REF:0000107 NCBI chrNW_004936903:436,949...448,670
Ensembl chrNW_004936903:435,447...448,025 		JBrowse link
G Dysf dysferlin acts_upstream_of_or_within ISO (PMID:20724702) MGI PMID:20724702 NCBI chrNW_004936491:15,412,606...15,618,519
Ensembl chrNW_004936491:15,413,206...15,618,519 		JBrowse link
G Egfr epidermal growth factor receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936678:365,005...560,546
Ensembl chrNW_004936678:365,834...436,528 		JBrowse link
G Fbxo43 F-box protein 43 acts_upstream_of_or_within ISO (PMID:16966421) MGI PMID:16966421 NCBI chrNW_004936470:43,091,516...43,100,973
Ensembl chrNW_004936470:43,088,714...43,100,973 		JBrowse link
G Flna filamin A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,097,288...1,123,206
Ensembl chrNW_004936809:1,097,294...1,123,201 		JBrowse link
G Fmn2 formin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:9,832,790...10,169,488
Ensembl chrNW_004936526:9,833,128...10,169,267 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16841086) Ensembl
MGI		 PMID:16841086 GO_REF:0000107 NCBI chrNW_004936679:388,500...588,518
Ensembl chrNW_004936679:387,387...443,880 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15317856) Ensembl
MGI		 PMID:15317856 GO_REF:0000107 NCBI chrNW_004936530:8,286,101...8,612,183
Ensembl chrNW_004936530:8,287,574...8,608,343 		JBrowse link
G Grin2c glutamate ionotropic receptor NMDA type subunit 2C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15317856) Ensembl
MGI		 PMID:15317856 GO_REF:0000107 NCBI chrNW_004936594:197,337...208,468
Ensembl chrNW_004936594:197,737...208,376 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:1,378,536...1,400,501
Ensembl chrNW_004936549:1,378,736...1,400,532 		JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:1,002,137...1,003,357
Ensembl chrNW_004936816:1,002,137...1,003,357 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:4,233,353...4,284,324
Ensembl chrNW_004936545:4,233,358...4,282,806 		JBrowse link
G LOC101955024 lanosterol 14-alpha demethylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:2,209,255...2,232,404
Ensembl chrNW_004936621:2,209,199...2,232,531 		JBrowse link
G LOC101964702 adhesion G protein-coupled receptor B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:9,247,749...9,313,230
Ensembl chrNW_004936470:9,248,319...9,313,230 		JBrowse link
G Mad2l1 mitotic arrest deficient 2 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936662:92,421...98,531
Ensembl chrNW_004936662:92,328...99,517 		JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:538,703...542,901
Ensembl chrNW_004936474:538,625...542,901 		JBrowse link
G Mdm4 MDM4 regulator of p53 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:268,151...299,494
Ensembl chrNW_004936567:268,151...299,494 		JBrowse link
G Mycbp2 MYC binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19398581) Ensembl
MGI		 PMID:19398581 GO_REF:0000107 NCBI chrNW_004936511:3,977,950...4,248,959
Ensembl chrNW_004936511:3,978,246...4,249,234 		JBrowse link
G Nell1 neural EGFL like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936654:1,591,016...2,392,496
Ensembl chrNW_004936654:1,591,847...2,394,692 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:4,052,277...4,097,051
Ensembl chrNW_004936538:4,052,448...4,097,051 		JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,771,384...19,785,034
Ensembl chrNW_004936475:19,769,488...19,785,311 		JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of_or_within ISO (PMID:20448149) MGI PMID:20448149 NCBI chrNW_004936766:1,104,841...1,306,368
Ensembl chrNW_004936766:1,104,728...1,305,972 		JBrowse link
G Park7 Parkinsonism associated deglycase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:2,422,780...2,436,817
Ensembl chrNW_004936623:2,422,833...2,436,817 		JBrowse link
G Phb1 prohibitin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,127,065...12,138,870 JBrowse link
G Phf20l1 PHD finger protein 20 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:16,406,293...16,475,384
Ensembl chrNW_004936470:16,406,653...16,475,586 		JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:309,530...321,294
Ensembl chrNW_004936659:309,506...321,334 		JBrowse link
G Prkcg protein kinase C gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936994:87,525...105,125
Ensembl chrNW_004936994:87,519...105,134 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15923614) Ensembl
MGI		 PMID:15923614 GO_REF:0000107 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,742,590...3,746,371
Ensembl chrNW_004936524:3,742,596...3,750,742 		JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936539:290,429...404,928
Ensembl chrNW_004936539:290,416...404,881 		JBrowse link
G Rilp Rab interacting lysosomal protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,775,942...7,779,563
Ensembl chrNW_004936538:7,775,942...7,779,365 		JBrowse link
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15509762)
(PMID:16319172)		 Ensembl
MGI		 PMID:15509762 PMID:16319172 GO_REF:0000107 NCBI chrNW_004936569:5,642,328...5,668,278
Ensembl chrNW_004936569:5,642,264...5,668,323 		JBrowse link
G Sf3b3 splicing factor 3b subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:23,038,424...23,086,134
Ensembl chrNW_004936475:23,037,687...23,086,188 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16611981) Ensembl
MGI		 PMID:16611981 GO_REF:0000107 NCBI chrNW_004936527:10,033,095...10,042,713
Ensembl chrNW_004936527:10,033,299...10,042,599 		JBrowse link
G Sirt2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000 		JBrowse link
G Smad3 SMAD family member 3 involved_in ISO PMID:16690606
PMID:20097766		 CACAO
BHF-UCL		 PMID:16690606 PMID:20097766 RGD:11079190 RGD:15023472 NCBI chrNW_004936471:27,080,662...27,185,861
Ensembl chrNW_004936471:27,080,575...27,189,793 		JBrowse link
G Smad4 SMAD family member 4 involved_in ISO PMID:20097766 BHF-UCL PMID:20097766 RGD:11079190 NCBI chrNW_004936497:12,242,869...12,278,012
Ensembl chrNW_004936497:12,249,140...12,278,123 		JBrowse link
G Snx12 sorting nexin 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:523,641...534,646
Ensembl chrNW_004936762:523,564...542,757 		JBrowse link
G Snx3 sorting nexin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:4,472,171...4,520,732
Ensembl chrNW_004936564:4,471,652...4,520,785 		JBrowse link
G Tmem132a transmembrane protein 132A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:33324648) Ensembl
MGI		 PMID:33324648 GO_REF:0000107 NCBI chrNW_004936581:1,996,838...2,006,118
Ensembl chrNW_004936581:1,995,941...2,006,059 		JBrowse link
G Trim40 tripartite motif containing 40 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936723:897,213...909,263
Ensembl chrNW_004936723:896,054...909,263 		JBrowse link
negative regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,654,503...4,660,950
Ensembl chrNW_004936580:4,654,503...4,660,966 		JBrowse link
G Epha4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:3,539,269...3,670,322
Ensembl chrNW_004936569:3,540,053...3,670,348 		JBrowse link
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUNH1orf116 chromosome unknown C1orf116 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,586,969...5,615,159
Ensembl chrNW_004936557:5,584,324...5,616,998
Ensembl chrNW_004936557:5,584,324...5,616,998 		JBrowse link
G Derl2 derlin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,328,783...2,342,068
Ensembl chrNW_004936677:2,328,904...2,342,080 		JBrowse link
G Derl3 derlin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:1,271,980...1,275,212
Ensembl chrNW_004936619:1,271,797...1,275,214 		JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:351,813...377,978
Ensembl chrNW_004936491:351,420...378,441 		JBrowse link
G Os9 OS9 endoplasmic reticulum lectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,832,434...1,860,200
Ensembl chrNW_004936646:1,832,015...1,859,576 		JBrowse link
G Svip small VCP interacting protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936654:3,452,781...3,459,161
Ensembl chrNW_004936654:3,453,043...3,459,219 		JBrowse link
G Ubac2 UBA domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:11,118,227...11,278,636
Ensembl chrNW_004936472:11,118,218...11,277,301 		JBrowse link
G Ube2g2 ubiquitin conjugating enzyme E2 G2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936778:1,414,410...1,440,949
Ensembl chrNW_004936778:1,414,348...1,440,950 		JBrowse link
G Ube2j1 ubiquitin conjugating enzyme E2 J1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936510:2,864,321...2,887,588
Ensembl chrNW_004936510:2,864,356...2,887,885 		JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pabpn1l PABPN1 like, cytoplasmic acts_upstream_of_or_within ISO (PMID:32558204) MGI PMID:32558204 NCBI chrNW_004936641:880,548...883,098
Ensembl chrNW_004936641:880,548...883,098 		JBrowse link
G Styx serine/threonine/tyrosine interacting protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936697:2,087,689...2,120,507
Ensembl chrNW_004936697:2,088,043...2,120,586 		JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (PMID:20100865) MGI PMID:20100865 NCBI chrNW_004936476:24,093,838...24,200,611
Ensembl chrNW_004936476:24,092,759...24,200,612 		JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:10,030,408...10,073,576
Ensembl chrNW_004936475:10,033,717...10,075,511 		JBrowse link
G Hfe homeostatic iron regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:1,940,079...1,947,574
Ensembl chrNW_004936671:1,940,101...1,947,580 		JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:3,800,619...3,934,347
Ensembl chrNW_004936592:3,809,452...3,934,327 		JBrowse link
G LOC101960348 E3 ubiquitin-protein ligase TRIM39 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936837:88,387...104,420
Ensembl chrNW_004936837:105,575...107,719
Ensembl chrNW_004936837:105,575...107,719 		JBrowse link
G Pdcl3 phosducin like 3 acts_upstream_of_or_within ISO (PMID:23792958) MGI PMID:23792958 NCBI chrNW_004936661:419,113...428,032 JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666 		JBrowse link
G Prmt6 protein arginine methyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936731:1,262,335...1,268,200
Ensembl chrNW_004936731:1,266,738...1,267,865 		JBrowse link
G Psen1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074 		JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO (PMID:30683861)
(MGI:6277293|PMID:30683861)		 UniProt PMID:30683861 MGI:6277293 NCBI chrNW_004936594:1,383,332...1,423,961 JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004936474:8,855,782...8,858,287 JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) CAFA PMID:15314173 NCBI chrNW_004936490:14,240,635...14,245,194
Ensembl chrNW_004936490:14,240,638...14,245,194 		JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004936537:6,341,961...6,344,831 JBrowse link
G Rps7 ribosomal protein S7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936532:1,734,993...1,740,202
Ensembl chrNW_004936532:1,734,983...1,742,151 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:1,599,453...1,616,480
Ensembl chrNW_004936588:1,598,164...1,616,599 		JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19684112) Ensembl
MGI		 PMID:19684112 GO_REF:0000107 NCBI chrNW_004936600:3,270,662...3,381,722
Ensembl chrNW_004936600:3,268,260...3,381,781 		JBrowse link
G Svip small VCP interacting protein involved_in ISO PMID:17000876 ParkinsonsUK-UCL PMID:17000876 RGD:10047192 NCBI chrNW_004936654:3,452,781...3,459,161
Ensembl chrNW_004936654:3,453,043...3,459,219 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:640,331...675,703
Ensembl chrNW_004936550:635,963...675,832 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:952,225...966,429
Ensembl chrNW_004936709:952,182...966,498 		JBrowse link
G Wnt1 Wnt family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16601693) Ensembl
MGI		 PMID:16601693 GO_REF:0000107 NCBI chrNW_004936512:6,781,001...6,785,358
Ensembl chrNW_004936512:6,780,882...6,785,358 		JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtap methylthioadenosine phosphorylase NOT|involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chrNW_004936652:3,431,588...3,468,770
Ensembl chrNW_004936652:3,431,171...3,472,071 		JBrowse link
G Pnp purine nucleoside phosphorylase involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chrNW_004936877:686,539...692,832 JBrowse link
nuclear protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akirin2 akirin 2 acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:34711951) UniProt
Ensembl		 PMID:34711951 GO_REF:0000107 NCBI chrNW_004936510:4,216,893...4,221,962
Ensembl chrNW_004936510:4,216,955...4,221,962 		JBrowse link
G Cul3 cullin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G Klhl15 kelch like family member 15 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936624:552,220...593,546
Ensembl chrNW_004936624:552,177...591,578 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:37478846), (PMID:37478862) UniProt PMID:37478846 PMID:37478862 NCBI chrNW_004936470:41,222,782...41,345,755
Ensembl chrNW_004936470:41,252,951...41,344,134 		JBrowse link
nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upp1 uridine phosphorylase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936478:22,508,602...22,531,604
Ensembl chrNW_004936478:22,508,559...22,531,898 		JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otc ornithine transcarbamylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:5,234,253...5,291,891
Ensembl chrNW_004936502:5,234,253...5,291,891 		JBrowse link
oxidation-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial involved_in IEA Ensembl
UniProt		 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936588:3,265,344...3,287,035
Ensembl chrNW_004936588:3,265,512...3,287,181 		JBrowse link
peptidoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970371 peptidoglycan recognition protein 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936580:3,184,904...3,197,203
Ensembl chrNW_004936580:3,184,904...3,194,319 		JBrowse link
G LOC101974774 peptidoglycan recognition protein 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936580:3,206,557...3,214,790
Ensembl chrNW_004936580:3,207,350...3,218,643 		JBrowse link
G Lyg1 lysozyme g1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936661:1,524,677...1,533,110
Ensembl chrNW_004936661:1,527,259...1,533,110 		JBrowse link
G Lyg2 lysozyme g2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936661:1,589,105...1,597,713
Ensembl chrNW_004936661:1,589,105...1,597,666 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936706:2,317,137...2,320,993
Ensembl chrNW_004936706:2,315,132...2,320,796 		JBrowse link
G Pglyrp2 peptidoglycan recognition protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936596:5,038,452...5,043,172
Ensembl chrNW_004936596:5,038,452...5,044,569 		JBrowse link
phenylethylamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Maob monoamine oxidase B ISO RGD PMID:18539264 RGD:2316732 NCBI chrNW_004936502:9,907,181...10,014,756
Ensembl chrNW_004936502:9,907,180...10,014,773 		JBrowse link
phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:26,994,549...27,099,758
Ensembl chrNW_004936470:26,994,215...27,100,999 		JBrowse link
G Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:12,391,204...12,397,877
Ensembl chrNW_004936501:12,391,314...12,397,864 		JBrowse link
G LOC101960864 group 10 secretory phospholipase A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:2,841,209...2,857,570
Ensembl chrNW_004936501:2,841,660...2,854,952 		JBrowse link
G Pla2g15 phospholipase A2 group XV involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,571,599...18,584,977
Ensembl chrNW_004936475:18,571,516...18,585,009 		JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:3,559,377...3,689,797
Ensembl chrNW_004936481:3,559,358...3,689,833 		JBrowse link
G Pla2g5 phospholipase A2 group V involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:6,131,915...6,150,810
Ensembl chrNW_004936474:6,131,884...6,150,819 		JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,011,752...3,060,962
Ensembl chrNW_004936492:3,011,772...3,060,986 		JBrowse link
G Pla2g7 phospholipase A2 group VII involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:13,609,847...13,646,174
Ensembl chrNW_004936476:13,609,374...13,649,998 		JBrowse link
G Plb1 phospholipase B1 involved_in ISO PMID:9442065
PMID:9442064		 UniProt PMID:9442064 PMID:9442065 RGD:30309923 RGD:633237 NCBI chrNW_004936493:4,112,632...4,210,882
Ensembl chrNW_004936493:4,112,858...4,232,492 		JBrowse link
G Pnpla7 patatin like phospholipase domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:535,104...605,993
Ensembl chrNW_004936669:535,796...605,710 		JBrowse link
G Pnpla8 patatin like phospholipase domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936653:1,470,314...1,499,813
Ensembl chrNW_004936653:1,470,299...1,499,900 		JBrowse link
phosphatidylserine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd12 abhydrolase domain containing 12, lysophospholipase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23297193) Ensembl
MGI
TreeGrafter		 PMID:23297193 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936620:451,216...531,353
Ensembl chrNW_004936620:451,174...531,454 		JBrowse link
G Abhd12b abhydrolase domain containing 12B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936495:14,728,885...14,753,188
Ensembl chrNW_004936495:14,729,594...14,753,102 		JBrowse link
G Abhd16a abhydrolase domain containing 16A, phospholipase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936727:1,828,966...1,843,334
Ensembl chrNW_004936727:1,828,905...1,844,967 		JBrowse link
G Abhd16b abhydrolase domain containing 16B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936514:11,068,762...11,070,162
Ensembl chrNW_004936514:11,068,762...11,070,162 		JBrowse link
platelet activating factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101960864 group 10 secretory phospholipase A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:2,841,209...2,857,570
Ensembl chrNW_004936501:2,841,660...2,854,952 		JBrowse link
G Pla2g7 phospholipase A2 group VII involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:13,609,847...13,646,174
Ensembl chrNW_004936476:13,609,374...13,649,998 		JBrowse link
polyamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936560:2,562,394...2,580,261
Ensembl chrNW_004936560:2,562,748...2,580,201 		JBrowse link
G Paox polyamine oxidase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12660232) RGD
MGI
Ensembl		 PMID:12660232 PMID:15541750 GO_REF:0000107 RGD:7244190 NCBI chrNW_004936486:19,503,631...19,511,918
Ensembl chrNW_004936486:19,503,631...19,511,920 		JBrowse link
G Sat1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:15541750 RGD:7244190 NCBI chrNW_004936624:756,761...759,979
Ensembl chrNW_004936624:756,712...759,983 		JBrowse link
G Smox spermine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:14,566,570...14,603,323
Ensembl chrNW_004936485:14,566,277...14,603,338 		JBrowse link
porphyrin-containing compound catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Urod uroporphyrinogen decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:26,207,169...26,210,599
Ensembl chrNW_004936474:26,207,169...26,210,623 		JBrowse link
positive regulation of anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc20 cell division cycle 20 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:24,760,258...24,765,069
Ensembl chrNW_004936474:24,760,298...24,767,725 		JBrowse link
G Cdc20b cell division cycle 20B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936480:12,593,216...12,640,661
Ensembl chrNW_004936480:12,593,216...12,640,661 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:2,000,872...2,007,569
Ensembl chrNW_004936588:1,993,721...2,009,240 		JBrowse link
positive regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:26,026,878...26,032,098
Ensembl chrNW_004936474:26,026,842...26,032,218 		JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:306,400...347,161
Ensembl chrNW_004936733:310,836...347,112 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,866,235...1,885,266
Ensembl chrNW_004936727:1,873,413...1,885,366 		JBrowse link
G Bcap31 B cell receptor associated protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:582,689...614,800
Ensembl chrNW_004936809:582,649...615,079 		JBrowse link
G Cav1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778
Ensembl chrNW_004936589:2,504,224...2,537,170 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,091,115...9,102,101
Ensembl chrNW_004936475:9,091,176...9,102,109 		JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936755:331,658...367,604
Ensembl chrNW_004936755:331,619...367,533 		JBrowse link
G Rnft1 ring finger protein, transmembrane 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:3,426,692...3,439,179
Ensembl chrNW_004936490:3,426,762...3,438,900 		JBrowse link
G Rnft2 ring finger protein, transmembrane 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936558:5,581,539...5,650,826
Ensembl chrNW_004936558:5,584,225...5,649,018 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:1,599,453...1,616,480
Ensembl chrNW_004936588:1,598,164...1,616,599 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:328,767...330,963
Ensembl chrNW_004936501:326,451...330,983 		JBrowse link
G Tmem259 transmembrane protein 259 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:440,460...449,440
Ensembl chrNW_004936588:441,135...449,444 		JBrowse link
G Tmem67 transmembrane protein 67 ISO RGD PMID:19815549 RGD:8554391 NCBI chrNW_004936544:6,887,867...6,931,669
Ensembl chrNW_004936544:6,887,532...6,932,179 		JBrowse link
G Tmx1 thioredoxin related transmembrane protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936495:14,432,971...14,447,380
Ensembl chrNW_004936495:14,431,137...14,447,476 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936828:543,651...588,673
Ensembl chrNW_004936828:542,407...588,679 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936819:530,833...534,185
Ensembl chrNW_004936819:532,037...533,920 		JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936566:3,416,468...3,522,127
Ensembl chrNW_004936566:3,416,389...3,522,133 		JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:18,339,915...18,364,973
Ensembl chrNW_004936477:18,339,827...18,364,998 		JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515 		JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Cdc14b cell division cycle 14B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:430,449...482,517
Ensembl chrNW_004936487:554,611...564,782 		JBrowse link
G Esrrb estrogen related receptor beta involved_in ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chrNW_004936488:5,350,133...5,452,366
Ensembl chrNW_004936488:5,292,466...5,454,689 		JBrowse link
G Gck glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chrNW_004936478:19,104,477...19,118,915
Ensembl chrNW_004936478:19,105,361...19,158,733 		JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11147825) Ensembl
MGI		 PMID:11147825 GO_REF:0000107 NCBI chrNW_004936512:7,762,325...7,770,007
Ensembl chrNW_004936512:7,762,643...7,770,309 		JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17408640) Ensembl
MGI		 PMID:17408640 GO_REF:0000107 NCBI chrNW_004936565:335,238...394,683
Ensembl chrNW_004936565:334,393...394,715 		JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Igf1 insulin like growth factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:11,709,623...11,784,028
Ensembl chrNW_004936492:11,709,222...11,778,351 		JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936816:1,002,137...1,003,357
Ensembl chrNW_004936816:1,002,137...1,003,357 		JBrowse link
G Insr insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:4,345,306...4,453,380
Ensembl chrNW_004936588:4,345,306...4,453,668 		JBrowse link
G Kat2b lysine acetyltransferase 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:12,341,545...12,415,637
Ensembl chrNW_004936473:12,344,343...12,417,875 		JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chrNW_004936619:1,207,058...1,208,010
Ensembl chrNW_004936619:1,203,746...1,208,442 		JBrowse link
G Mlx MAX dimerization protein MLX involved_in ISO (PMID:14742444) MGI PMID:14742444 NCBI chrNW_004936490:17,323,137...17,327,774
Ensembl chrNW_004936490:17,323,919...17,328,485 		JBrowse link
G Mlxipl MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:2,839,105...2,856,997
Ensembl chrNW_004936543:2,839,105...2,857,002 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chrNW_004936470:20,480,844...20,485,955
Ensembl chrNW_004936470:20,480,829...20,485,965 		JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765 		JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004936518:1,817,051...1,843,376
Ensembl chrNW_004936518:1,804,969...1,843,380 		JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004936522:4,872,360...4,939,873
Ensembl chrNW_004936522:4,875,046...4,939,879 		JBrowse link
G Psen1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065 		JBrowse link
G Slc4a4 solute carrier family 4 member 4 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:21976511)
(MGI:5295108|PMID:21976511)		 ARUK-UCL
Ensembl		 PMID:21976511 GO_REF:0000107 MGI:5295108 NCBI chrNW_004936598:3,391,587...3,713,629
Ensembl chrNW_004936598:3,391,575...3,713,635 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:35263589) UniProt PMID:35263589 NCBI chrNW_004936561:3,826,802...3,844,406
Ensembl chrNW_004936561:3,825,787...3,844,483 		JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 involved_in ISO (PMID:34244144) FlyBase PMID:34244144 NCBI chrNW_004936482:8,551,749...8,563,586
Ensembl chrNW_004936482:8,551,603...8,563,651 		JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:1,776,065...2,546,286
Ensembl chrNW_004936536:1,776,081...1,829,837 		JBrowse link
positive regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:21810484) ARUK-UCL
Ensembl		 PMID:21810484 GO_REF:0000107 NCBI chrNW_004936669:922,978...941,996
Ensembl chrNW_004936669:926,622...942,167 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:15950758) BHF-UCL PMID:15950758 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917 		JBrowse link
positive regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpm heterogeneous nuclear ribonucleoprotein M involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:5,241,276...5,283,952
Ensembl chrNW_004936588:5,222,509...5,239,890
Ensembl chrNW_004936588:5,222,509...5,239,890 		JBrowse link
G Ldlr low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,326,900...1,407,236
Ensembl chrNW_004936646:1,327,374...1,406,456 		JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in ISO (PMID:9228033) ARUK-UCL PMID:9228033 NCBI chrNW_004936469:10,245,001...10,438,933
Ensembl chrNW_004936469:10,244,881...10,438,935 		JBrowse link
positive regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936486:19,389,925...19,403,577
Ensembl chrNW_004936486:19,391,324...19,402,332 		JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (MGI:1326990|PMID:9857183) BHF-UCL PMID:9857183 MGI:1326990 NCBI chrNW_004936710:2,301,470...2,388,533
Ensembl chrNW_004936710:2,301,730...2,387,695 		JBrowse link
G Adra2a adrenoceptor alpha 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:1,837,785...1,841,019
Ensembl chrNW_004936486:1,838,176...1,839,630 		JBrowse link
G Apoe apolipoprotein E involved_in ISO (PMID:15950758)
(PMID:25015123)		 BHF-UCL
ARUK-UCL		 PMID:15950758 PMID:25015123 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G App amyloid beta precursor protein involved_in ISO (PMID:25015123) ARUK-UCL PMID:25015123 NCBI chrNW_004936640:1,549,977...1,787,436
Ensembl chrNW_004936640:1,550,167...1,787,286 		JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936671:780,173...827,628
Ensembl chrNW_004936671:782,135...827,771 		JBrowse link
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936545:6,139,130...6,144,543
Ensembl chrNW_004936545:6,139,116...6,148,452 		JBrowse link
G Il1b interleukin 1 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936783:1,251,678...1,256,807
Ensembl chrNW_004936783:1,252,158...1,257,165 		JBrowse link
G Nrdc nardilysin convertase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:9,041,204...9,129,674
Ensembl chrNW_004936522:9,041,111...9,129,327 		JBrowse link
G Pacsin3 protein kinase C and casein kinase substrate in neurons 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:1,988,839...1,995,597
Ensembl chrNW_004936562:1,989,662...1,995,580 		JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:26651291) Ensembl
MGI		 PMID:26651291 GO_REF:0000107 NCBI chrNW_004936483:9,753,112...9,792,817
Ensembl chrNW_004936483:9,766,275...9,793,001 		JBrowse link
G Sh3d19 SH3 domain containing 19 involved_in ISO (PMID:15280379) BHF-UCL PMID:15280379 NCBI chrNW_004936689:1,147,350...1,241,202
Ensembl chrNW_004936689:1,147,353...1,239,064 		JBrowse link
G Snx33 sorting nexin 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:34,414,086...34,425,236
Ensembl chrNW_004936471:34,414,474...34,428,784 		JBrowse link
G Snx9 sorting nexin 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:9,736,255...9,804,841
Ensembl chrNW_004936489:9,736,242...9,804,874 		JBrowse link
G Tnf tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:908,414...935,765
Ensembl chrNW_004936474:908,485...934,177 		JBrowse link
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag2 BAG cochaperone 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:4,131,159...4,142,357
Ensembl chrNW_004936476:4,129,013...4,142,357 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:15,516,348...15,526,380
Ensembl chrNW_004936485:15,516,302...15,526,376 		JBrowse link
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19416853) MGI
TreeGrafter
Ensembl		 PMID:19416853 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936531:8,533,926...8,542,516
Ensembl chrNW_004936531:8,532,353...8,542,551 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764 		JBrowse link
G Fmr1 Fragile X messenger ribonucleoprotein 1 involved_in ISO (MGI:5770038|PMID:24709664) UniProt PMID:24709664 MGI:5770038 NCBI chrNW_004936513:1,290,038...1,327,850
Ensembl chrNW_004936513:1,289,558...1,327,856 		JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936500:8,067,009...8,072,383
Ensembl chrNW_004936500:8,068,188...8,068,553 		JBrowse link
G LOC101972090 26S proteasome regulatory subunit 4-like involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936511:7,890,654...7,892,253 JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:11,998,064...11,999,431
Ensembl chrNW_004936501:11,997,834...11,999,709 		JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 ISO RGD PMID:12359729 RGD:7245486 NCBI chrNW_004936588:1,356,769...1,361,037
Ensembl chrNW_004936588:1,356,769...1,361,037 		JBrowse link
G Osbpl7 oxysterol binding protein like 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,491,704...13,506,742
Ensembl chrNW_004936490:13,491,544...13,506,768 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Psmc1 proteasome 26S subunit, ATPase 1 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936488:17,455,612...17,468,933
Ensembl chrNW_004936488:17,455,461...17,469,527 		JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936479:20,150,738...20,167,765
Ensembl chrNW_004936479:20,148,632...20,168,130 		JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936562:1,810,883...1,817,040
Ensembl chrNW_004936562:1,810,864...1,823,077 		JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936661:2,522,665...2,528,279
Ensembl chrNW_004936661:2,522,615...2,528,284 		JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936541:4,470,210...4,475,233 JBrowse link
G Psmc6 proteasome 26S subunit, ATPase 6 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004936697:2,122,727...2,143,988
Ensembl chrNW_004936697:2,121,677...2,144,066 		JBrowse link
G Rnf40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chrNW_004936501:13,154,963...13,167,211
Ensembl chrNW_004936501:13,154,999...13,167,199 		JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936507:5,305,489...5,349,828
Ensembl chrNW_004936507:5,305,460...5,352,337 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:18,659,725...18,665,406
Ensembl chrNW_004936476:18,659,815...18,663,940 		JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15937334) Ensembl
MGI		 PMID:15937334 GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093 		JBrowse link
G Ankib1 ankyrin repeat and IBR domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936803:1,393,918...1,423,086
Ensembl chrNW_004936803:1,393,954...1,423,068 		JBrowse link
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:31,822,592...31,947,624
Ensembl chrNW_004936471:31,822,592...31,947,624 		JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936529:648,661...713,616
Ensembl chrNW_004936529:648,675...713,675 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:23152632) MGI PMID:23152632 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G Aurka aurora kinase A acts_upstream_of_or_within ISO (PMID:17060449) MGI PMID:17060449 NCBI chrNW_004936875:295,238...310,457 JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16601693) Ensembl
MGI
TreeGrafter		 PMID:16601693 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:599,963...633,837
Ensembl chrNW_004936501:599,919...633,873 		JBrowse link
G Axin2 axin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:7,155,963...7,242,466
Ensembl chrNW_004936541:7,211,985...7,242,470 		JBrowse link
G Bag2 BAG cochaperone 2 NOT|involved_in ISO (MGI:6148635|PMID:19228967) ARUK-UCL PMID:19228967 MGI:6148635 NCBI chrNW_004936476:4,131,159...4,142,357
Ensembl chrNW_004936476:4,129,013...4,142,357 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22302990) MGI
Ensembl		 PMID:22302990 GO_REF:0000107 NCBI chrNW_004936662:1,081,237...1,116,719
Ensembl chrNW_004936662:1,080,295...1,116,636 		JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:857,483...875,527
Ensembl chrNW_004936641:810,074...875,534 		JBrowse link
G Chfr checkpoint with forkhead and ring finger domains involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22285184) Ensembl
MGI		 PMID:22285184 GO_REF:0000107 NCBI chrNW_004936660:2,725,019...2,754,564
Ensembl chrNW_004936660:2,724,989...2,754,586 		JBrowse link
G Clu clusterin involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936675:499,745...513,515
Ensembl chrNW_004936675:499,199...513,836 		JBrowse link
G Cop1 COP1 E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:12,262,415...12,437,627
Ensembl chrNW_004936481:12,262,409...12,437,571 		JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:5,351,354...5,394,856
Ensembl chrNW_004936504:5,351,029...5,396,034 		JBrowse link
G Csnk1d casein kinase 1 delta involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:5,720,887...5,743,206
Ensembl chrNW_004936594:5,724,406...5,743,180 		JBrowse link
G Dab2 DAB adaptor protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:2,915,819...2,936,474
Ensembl chrNW_004936518:2,915,764...2,937,875 		JBrowse link
G Dda1 DET1 and DDB1 associated 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:3,545,669...3,554,134
Ensembl chrNW_004936596:3,545,669...3,554,134 		JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936485:15,516,348...15,526,380
Ensembl chrNW_004936485:15,516,302...15,526,376 		JBrowse link
G Det1 DET1 partner of COP1 E3 ubiquitin ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936483:14,535,771...14,556,236
Ensembl chrNW_004936483:14,535,800...14,556,248 		JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936569:1,689,926...1,697,179
Ensembl chrNW_004936569:1,689,507...1,698,954 		JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,797,348...1,811,043
Ensembl chrNW_004936737:1,797,326...1,810,286 		JBrowse link
G Fbxo22 F-box protein 22 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19319192) Ensembl
MGI
TreeGrafter		 PMID:19319192 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:36,232,749...36,255,772
Ensembl chrNW_004936471:36,232,583...36,255,672 		JBrowse link
G Fbxw8 F-box and WD repeat domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:5,423,815...5,523,649
Ensembl chrNW_004936558:5,421,976...5,523,676 		JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936595:534,042...536,289
Ensembl chrNW_004936595:533,977...536,271 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5501380|PMID:23707074) Ensembl
ParkinsonsUK-UCL		 PMID:23707074 GO_REF:0000107 MGI:5501380 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Gclc glutamate-cysteine ligase catalytic subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17189825) Ensembl
MGI		 PMID:17189825 GO_REF:0000107 NCBI chrNW_004936476:7,371,270...7,418,756
Ensembl chrNW_004936476:7,371,149...7,418,958 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:266,462...277,256
Ensembl chrNW_004936706:269,126...277,256 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22660580) Ensembl
MGI		 PMID:22660580 GO_REF:0000107 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303 		JBrowse link
G Hspbp1 HSPA (Hsp70) binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:526,334...541,931
Ensembl chrNW_004936886:526,287...542,606 		JBrowse link
G Il33 interleukin 33 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22660580) Ensembl
MGI		 PMID:22660580 GO_REF:0000107 NCBI chrNW_004936539:763,755...791,461
Ensembl chrNW_004936539:623,248...791,470 		JBrowse link
G Klhl40 kelch like family member 40 involved_in ISO (MGI:5700633|PMID:25940086) UniProt PMID:25940086 MGI:5700633 NCBI chrNW_004936695:2,417,938...2,424,622
Ensembl chrNW_004936695:2,414,573...2,424,702 		JBrowse link
G LOC101955831 heat shock 70 kDa protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:1,718,952...1,721,691 JBrowse link
G LOC101956126 heat shock 70 kDa protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936727:1,732,323...1,735,128 JBrowse link
G LOC101967743 casein kinase I involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:2,904,622...2,925,904
Ensembl chrNW_004936492:2,907,015...2,928,418 		JBrowse link
G LOC101969625 DET1 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936677:2,971,964...2,973,437 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936607:628,469...761,117
Ensembl chrNW_004936607:626,991...761,123 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (MGI:6148490|PMID:29153991) UniProt PMID:29153991 MGI:6148490 NCBI chrNW_004936728:1,775,746...1,893,895
Ensembl chrNW_004936728:1,775,641...1,893,907 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:551,678...602,027
Ensembl chrNW_004936739:551,629...602,047 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Nkd2 NKD inhibitor of WNT signaling pathway 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936815:669,389...701,402
Ensembl chrNW_004936815:669,389...701,402 		JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:1,334,487...1,343,867
Ensembl chrNW_004936664:1,334,510...1,342,321 		JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:6,726,363...6,756,445
Ensembl chrNW_004936527:6,726,357...6,755,318 		JBrowse link
G Pabir1 PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:5,095,986...5,097,274
Ensembl chrNW_004936503:5,096,112...5,096,963 		JBrowse link
G Pias1 protein inhibitor of activated STAT 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:27,925,153...28,055,632
Ensembl chrNW_004936471:27,925,153...28,055,632 		JBrowse link
G Plk1 polo like kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:8,321,415...8,332,414
Ensembl chrNW_004936501:8,321,305...8,332,424 		JBrowse link
G Plk2 polo like kinase 2 ISO RGD PMID:18723513 RGD:7241135 NCBI chrNW_004936480:9,680,461...9,686,593
Ensembl chrNW_004936480:9,680,449...9,686,595 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936512:1,165,159...1,270,138
Ensembl chrNW_004936512:1,163,615...1,270,255 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Psen1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074 		JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISO (PMID:16023600) UniProt PMID:16023600 NCBI chrNW_004936499:6,691,758...6,698,515
Ensembl chrNW_004936499:6,691,476...6,702,986 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936826:748,256...753,460
Ensembl chrNW_004936826:747,291...753,442 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:2,001,356...2,007,520
Ensembl chrNW_004936659:2,001,301...2,010,215 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:14739464) UniProt PMID:14739464 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835 		JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:436,559...453,137
Ensembl chrNW_004936598:436,260...453,137 		JBrowse link
G Rnf14 ring finger protein 14 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936504:12,200,395...12,217,454
Ensembl chrNW_004936504:12,200,388...12,217,518 		JBrowse link
G Rnf144a ring finger protein 144A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936532:3,969,108...4,047,022
Ensembl chrNW_004936532:3,969,081...4,046,976 		JBrowse link
G Rnf144b ring finger protein 144B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936552:4,080,675...4,165,882
Ensembl chrNW_004936552:4,083,483...4,166,890 		JBrowse link
G Rnf180 ring finger protein 180 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18363970), (PMID:23926250) Ensembl
MGI
TreeGrafter		 PMID:18363970 PMID:23926250 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936480:4,809,103...4,834,977
Ensembl chrNW_004936480:4,659,751...4,834,972 		JBrowse link
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:42,965,790...43,007,487
Ensembl chrNW_004936470:42,965,284...43,007,487 		JBrowse link
G Rnf19b ring finger protein 19B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:15,827,800...15,850,405
Ensembl chrNW_004936474:15,827,303...15,849,632 		JBrowse link
G Sh3rf1 SH3 domain containing ring finger 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936516:1,267,128...1,429,040
Ensembl chrNW_004936516:1,267,029...1,428,841 		JBrowse link
G Sh3rf2 SH3 domain containing ring finger 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936504:8,602,116...8,731,099
Ensembl chrNW_004936504:8,599,157...8,731,118 		JBrowse link
G Sh3rf3 SH3 domain containing ring finger 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936829:714,518...914,894
Ensembl chrNW_004936829:826,762...956,056 		JBrowse link
G Sirt2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000 		JBrowse link
G Sirt6 sirtuin 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,387,162...2,394,066
Ensembl chrNW_004936588:2,386,977...2,394,096 		JBrowse link
G Socs4 suppressor of cytokine signaling 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936697:110,637...129,767
Ensembl chrNW_004936697:110,952...129,686 		JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936508:5,531,002...5,588,022
Ensembl chrNW_004936508:5,531,002...5,587,549 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:328,767...330,963
Ensembl chrNW_004936501:326,451...330,983 		JBrowse link
G Sumo1 small ubiquitin like modifier 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:1,402,977...1,413,974
Ensembl chrNW_004936726:1,399,050...1,429,205 		JBrowse link
G Sumo2 small ubiquitin like modifier 2 involved_in ISO (PMID:18408734) UniProt PMID:18408734 NCBI chrNW_004936594:469,616...484,375 JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:15053879) BHF-UCL PMID:15053879 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:22,401,713...22,408,808
Ensembl chrNW_004936470:22,401,379...22,409,490 		JBrowse link
G Trib2 tribbles pseudokinase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936532:8,354,205...8,377,924 JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:18,077,850...18,082,817
Ensembl chrNW_004936485:18,077,850...18,083,553 		JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chrNW_004936590:4,637,858...4,670,789
Ensembl chrNW_004936590:4,637,065...4,670,827 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:952,225...966,429
Ensembl chrNW_004936709:952,182...966,498 		JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
G Zer1 zyg-11 related cell cycle regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:16,210,738...16,239,686
Ensembl chrNW_004936487:16,210,707...16,239,660 		JBrowse link
G Zfand2a zinc finger AN1-type containing 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16973439) Ensembl
MGI		 PMID:16973439 GO_REF:0000107 NCBI chrNW_004936754:1,353,482...1,363,651
Ensembl chrNW_004936754:1,353,342...1,363,720 		JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:8,197,557...8,266,061
Ensembl chrNW_004936522:8,198,098...8,266,109 		JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:26,026,878...26,032,098
Ensembl chrNW_004936474:26,026,842...26,032,218 		JBrowse link
positive regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amer1 APC membrane recruitment protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936635:3,465,473...3,482,311
Ensembl chrNW_004936635:3,478,598...3,482,008 		JBrowse link
G Apc APC regulator of WNT signaling pathway involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16478791)
(PMID:12952940)		 Ensembl
MGI
TreeGrafter		 PMID:12952940 PMID:16478791 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453 		JBrowse link
G Apc2 APC regulator of WNT signaling pathway 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:767,115...787,321
Ensembl chrNW_004936588:767,066...786,951 		JBrowse link
G Asb11 ankyrin repeat and SOCS box containing 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:4,701,670...4,728,527
Ensembl chrNW_004936470:4,701,681...4,728,555 		JBrowse link
G Asb13 ankyrin repeat and SOCS box containing 13 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936484:8,855,456...8,873,940
Ensembl chrNW_004936484:8,855,399...8,875,018 		JBrowse link
G Asb5 ankyrin repeat and SOCS box containing 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936516:6,811,144...6,903,258
Ensembl chrNW_004936516:6,811,130...6,903,045 		JBrowse link
G Asb9 ankyrin repeat and SOCS box containing 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17148442) MGI
TreeGrafter
Ensembl		 PMID:17148442 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:4,660,417...4,692,175
Ensembl chrNW_004936470:4,660,443...4,692,173 		JBrowse link
G Atg4b autophagy related 4B cysteine peptidase ISO RGD PMID:16874114 RGD:2301238 NCBI chrNW_004936745:291,311...308,469
Ensembl chrNW_004936745:292,746...307,746 		JBrowse link
G Atg7 autophagy related 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G Axin1 axin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:599,963...633,837
Ensembl chrNW_004936501:599,919...633,873 		JBrowse link
G C4bpb complement component 4 binding protein beta involved_in ISO (PMID:22333221) BHF-UCL PMID:22333221 NCBI chrNW_004936557:5,546,692...5,561,531 JBrowse link
G Cblb Cbl proto-oncogene B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chrNW_004936701:1,157,790...1,353,375
Ensembl chrNW_004936701:1,157,797...1,353,388 		JBrowse link
G Cdkn1b cyclin dependent kinase inhibitor 1B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:19056892) MGI
Ensembl		 PMID:19056892 GO_REF:0000107 NCBI chrNW_004936587:4,573,166...4,578,480
Ensembl chrNW_004936587:4,572,728...4,578,461 		JBrowse link
G Crebrf CREB3 regulatory factor involved_in ISO (PMID:18391022) UniProt PMID:18391022 NCBI chrNW_004936609:2,460,379...2,498,614
Ensembl chrNW_004936609:2,449,601...2,498,661 		JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO (PMID:20625391) UniProt PMID:20625391 NCBI chrNW_004936485:17,966,993...18,021,191 JBrowse link
G Cul4a cullin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:409,083...432,442
Ensembl chrNW_004936472:408,659...432,379 		JBrowse link
G Cul4b cullin 4B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18602923) Ensembl
MGI		 PMID:18602923 GO_REF:0000107 NCBI chrNW_004936479:9,490,717...9,535,998
Ensembl chrNW_004936479:9,479,133...9,534,262 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174 		JBrowse link
G Dact1 dishevelled binding antagonist of beta catenin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:16446366) MGI
Ensembl		 PMID:16446366 GO_REF:0000107 NCBI chrNW_004936495:3,017,029...3,026,759
Ensembl chrNW_004936495:3,017,150...3,025,684 		JBrowse link
G Dcaf1 DDB1 and CUL4 associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:2,786,252...2,856,516
Ensembl chrNW_004936529:2,786,252...2,856,967 		JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598 		JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:1,347,991...1,389,836
Ensembl chrNW_004936557:1,347,991...1,389,836 		JBrowse link
G Egln2 egl-9 family hypoxia inducible factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:3,061,391...3,070,219
Ensembl chrNW_004936661:3,061,308...3,070,192 		JBrowse link
G Ezr ezrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:10,413,374...10,457,771
Ensembl chrNW_004936489:10,412,710...10,458,201 		JBrowse link
G Faf1 Fas associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:9,774,943...10,160,987
Ensembl chrNW_004936522:9,784,203...10,161,774 		JBrowse link
G Fbxl5 F-box and leucine rich repeat protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21907140) Ensembl
MGI		 PMID:21907140 GO_REF:0000107 NCBI chrNW_004936477:12,279,521...12,312,927
Ensembl chrNW_004936477:12,279,541...12,313,007 		JBrowse link
G Fbxo11 F-box protein 11 ISO RGD PMID:32988261 RGD:152176655 NCBI chrNW_004936508:4,622,695...4,708,694
Ensembl chrNW_004936508:4,685,595...4,708,694 		JBrowse link
G Foxo1 forkhead box O1 involved_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chrNW_004936565:5,210,014...5,299,213
Ensembl chrNW_004936565:5,210,014...5,302,436 		JBrowse link
G Gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22836275) Ensembl
MGI		 PMID:22836275 GO_REF:0000107 NCBI chrNW_004936492:3,445,271...3,464,960
Ensembl chrNW_004936492:3,445,094...3,464,809 		JBrowse link
G Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22836275) Ensembl
MGI		 PMID:22836275 GO_REF:0000107 NCBI chrNW_004936594:531,844...548,487
Ensembl chrNW_004936594:532,342...548,440 		JBrowse link
G Gja1 gap junction protein alpha 1 ISO RGD PMID:12952975 RGD:1582696 NCBI chrNW_004936658:3,920,043...3,932,987
Ensembl chrNW_004936658:3,920,043...3,932,987 		JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18477453) Ensembl
MGI		 PMID:18477453 GO_REF:0000107 NCBI chrNW_004936691:1,060,013...1,459,736
Ensembl chrNW_004936691:1,059,994...1,459,740 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:17686886 RGD:10045647 NCBI chrNW_004936536:6,730,070...6,893,818
Ensembl chrNW_004936536:6,730,062...6,894,303 		JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21700773) Ensembl
MGI		 PMID:21700773 GO_REF:0000107 NCBI chrNW_004936570:1,009,344...1,010,654
Ensembl chrNW_004936570:1,009,312...1,010,686 		JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:18292230) ARUK-UCL PMID:18292230 NCBI chrNW_004936835:316,767...321,999
Ensembl chrNW_004936835:316,767...321,990 		JBrowse link
G Ier3 immediate early response 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19096392) Ensembl
MGI		 PMID:19096392 GO_REF:0000107 NCBI chrNW_004936837:401,475...402,769
Ensembl chrNW_004936837:401,524...402,741 		JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767 		JBrowse link
G LOC101973539 C4b-binding protein alpha chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:5,511,372...5,535,158
Ensembl chrNW_004936557:5,511,320...5,542,713 		JBrowse link
G LOC101977665 tumor necrosis factor ligand superfamily member 12 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17389268) MGI
Ensembl		 PMID:17389268 GO_REF:0000107 NCBI chrNW_004936595:831,252...839,783
Ensembl chrNW_004936595:830,466...839,748 		JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20018880) Ensembl
MGI		 PMID:20018880 GO_REF:0000107 NCBI chrNW_004936815:281,664...345,915
Ensembl chrNW_004936815:292,200...344,413 		JBrowse link
G Mapk15 mitogen-activated protein kinase 15 ISO Human Estrogen Receptor alpha RGD PMID:12917323 RGD:2304230 NCBI chrNW_004936470:8,420,850...8,425,996
Ensembl chrNW_004936470:8,420,732...8,425,884 		JBrowse link
G Msn moesin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936635:2,390,390...2,461,870
Ensembl chrNW_004936635:2,389,823...2,461,930 		JBrowse link
G Mylip myosin regulatory light chain interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936552:2,325,161...2,341,356
Ensembl chrNW_004936552:2,325,378...2,339,867 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of_or_within ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004936504:12,053,470...12,103,346 JBrowse link
G Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,946,058...1,953,734
Ensembl chrNW_004936596:1,946,111...1,953,698 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:14973438)
(PMID:11748237)		 MGI
Ensembl		 PMID:11748237 PMID:14973438 GO_REF:0000107 NCBI chrNW_004936471:17,254,777...17,374,725
Ensembl chrNW_004936471:17,252,234...17,374,804 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase ISO RGD PMID:18174164 RGD:6893331 NCBI chrNW_004936497:6,106,284...6,318,339
Ensembl chrNW_004936497:6,106,268...6,318,354 		JBrowse link
G Nkd1 NKD inhibitor of WNT signaling pathway 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:3,559,754...3,655,216
Ensembl chrNW_004936475:3,579,501...3,655,205 		JBrowse link
G Nsf N-ethylmaleimide sensitive factor, vesicle fusing ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,989,092...2,137,006
Ensembl chrNW_004936541:1,987,326...2,137,067 		JBrowse link
G Oaz1 ornithine decarboxylase antizyme 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:1,356,769...1,361,037
Ensembl chrNW_004936588:1,356,769...1,361,037 		JBrowse link
G Oaz2 ornithine decarboxylase antizyme 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:25,069,035...25,081,640
Ensembl chrNW_004936471:25,070,127...25,081,431 		JBrowse link
G Oaz3 ornithine decarboxylase antizyme 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:1,963,372...1,966,086
Ensembl chrNW_004936580:1,963,415...1,965,950 		JBrowse link
G Plk2 polo like kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:9,680,461...9,686,593
Ensembl chrNW_004936480:9,680,449...9,686,595 		JBrowse link
G Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chrNW_004936529:8,885,803...9,034,217
Ensembl chrNW_004936529:8,920,243...9,033,865 		JBrowse link
G Rab7a RAB7A, member RAS oncogene family involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936798:297,600...304,929
Ensembl chrNW_004936798:296,066...305,176 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:11027288), (PMID:16482215), (PMID:27626656) UniProt PMID:11027288 PMID:16482215 PMID:27626656 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835 		JBrowse link
G Rdx radixin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:3,992,542...4,060,598
Ensembl chrNW_004936612:3,992,542...4,040,315 		JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (PMID:18953687)
(PMID:22624035)		 UniProt PMID:18953687 PMID:22624035 NCBI chrNW_004936525:8,906,848...9,028,792
Ensembl chrNW_004936525:8,906,631...9,004,372 		JBrowse link
G Rhbdd3 rhomboid domain containing 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610400) Ensembl
MGI		 PMID:23610400 GO_REF:0000107 NCBI chrNW_004936657:3,290,684...3,296,352
Ensembl chrNW_004936657:3,290,574...3,296,705 		JBrowse link
G Rilp Rab interacting lysosomal protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,775,942...7,779,563
Ensembl chrNW_004936538:7,775,942...7,779,365 		JBrowse link
G Rnf41 ring finger protein 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:605,302...630,645
Ensembl chrNW_004936646:605,302...631,022 		JBrowse link
G Sec22b SEC22 homolog B, vesicle trafficking protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936872:294,116...313,893
Ensembl chrNW_004936872:294,066...313,293 		JBrowse link
G Sgsm3 small G protein signaling modulator 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:1,380,322...1,416,060
Ensembl chrNW_004936492:1,385,347...1,416,124 		JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,507,147...12,520,424
Ensembl chrNW_004936490:12,507,116...12,523,674 		JBrowse link
G Snx1 sorting nexin 1 ISO RGD PMID:11110793 RGD:68866 NCBI chrNW_004936471:24,569,677...24,617,016
Ensembl chrNW_004936471:24,569,609...24,619,826 		JBrowse link
G Sorl1 sortilin related receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:6,192,407...6,352,835
Ensembl chrNW_004936542:6,192,407...6,352,424 		JBrowse link
G Sox17 SRY-box transcription factor 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936496:1,248,582...1,251,406
Ensembl chrNW_004936496:1,248,577...1,251,430 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19047045) Ensembl
MGI		 PMID:19047045 GO_REF:0000107 NCBI chrNW_004936655:1,849,044...1,852,648
Ensembl chrNW_004936655:1,847,272...1,852,705 		JBrowse link
G Stx5 syntaxin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:462,417...487,563
Ensembl chrNW_004936581:462,969...487,578 		JBrowse link
G Tiparp TCDD inducible poly(ADP-ribose) polymerase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23275542) MGI
Ensembl		 PMID:23275542 GO_REF:0000107 NCBI chrNW_004936519:3,683,972...3,712,081
Ensembl chrNW_004936519:3,684,515...3,712,081 		JBrowse link
G Tnf tumor necrosis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,936,066...1,937,766
Ensembl chrNW_004936727:1,936,066...1,937,766 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18952128) Ensembl
MGI		 PMID:18952128 GO_REF:0000107 NCBI chrNW_004936560:5,124,955...5,138,988
Ensembl chrNW_004936560:5,128,843...5,138,345 		JBrowse link
G Trim32 tripartite motif containing 32 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16243356) Ensembl
MGI		 PMID:16243356 GO_REF:0000107 NCBI chrNW_004936487:5,606,690...5,619,856
Ensembl chrNW_004936487:5,606,693...5,619,856 		JBrowse link
G Ubr3 ubiquitin protein ligase E3 component n-recognin 3 ISO RGD PMID:32988261 RGD:152176655 NCBI chrNW_004936509:325,277...537,423
Ensembl chrNW_004936509:324,953...535,141 		JBrowse link
G Ubxn2a UBX domain protein 2A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:7,969,271...7,978,537
Ensembl chrNW_004936493:7,971,960...7,985,314 		JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
G Vgll4 vestigial like family member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:1,789,479...1,938,440
Ensembl chrNW_004936602:1,815,313...1,936,031 		JBrowse link
G Vip vasoactive intestinal peptide involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000107 GO_REF:0000117 GO_REF:0000118 NCBI chrNW_004936489:5,425,778...5,434,483
Ensembl chrNW_004936489:5,425,726...5,434,785 		JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:21148287) UniProt PMID:21148287 NCBI chrNW_004936542:4,022,928...4,035,577
Ensembl chrNW_004936542:4,023,134...4,035,260 		JBrowse link
G Vps28 VPS28 subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,829,207...7,833,213
Ensembl chrNW_004936470:7,830,114...7,833,047 		JBrowse link
G Vps35 VPS35 retromer complex component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:50,476...77,797
Ensembl chrNW_004936475:50,321...78,097 		JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12952940) Ensembl
MGI		 PMID:12952940 GO_REF:0000107 NCBI chrNW_004936473:6,031,627...6,052,211
Ensembl chrNW_004936473:6,029,976...6,052,159 		JBrowse link
positive regulation of protein catabolic process in the vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936794:664,089...670,294
Ensembl chrNW_004936794:664,115...669,800 		JBrowse link
positive regulation of proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:12,396,416...12,399,760
Ensembl chrNW_004936474:12,396,023...12,401,023 		JBrowse link
G Ctsc cathepsin C involved_in ISO PMID:18307834 ParkinsonsUK-UCL PMID:18307834 RGD:8661625 NCBI chrNW_004936736:1,201,343...1,240,311 JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (MGI:5141165|PMID:21700325) Ensembl
ARUK-UCL		 PMID:21700325 GO_REF:0000107 MGI:5141165 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:5444793|PMID:22949502) ARUK-UCL PMID:22949502 MGI:5444793 NCBI chrNW_004936474:14,102,080...14,119,592
Ensembl chrNW_004936474:14,102,423...14,119,558 		JBrowse link
G Rgn regucalcin ISO RGD PMID:1513338 RGD:9590188 NCBI chrNW_004936502:12,872,938...12,891,270
Ensembl chrNW_004936502:12,872,824...12,891,506 		JBrowse link
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B cell receptor associated protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:582,689...614,800
Ensembl chrNW_004936809:582,649...615,079 		JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,486,617...4,516,379
Ensembl chrNW_004936577:4,486,885...4,513,555 		JBrowse link
G LOC101973161 ER degradation-enhancing alpha-mannosidase-like protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,578,267...5,605,512
Ensembl chrNW_004936561:5,578,236...5,605,810 		JBrowse link
positive regulation of sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 involved_in ISO (MGI:4947032|PMID:21177474) UniProt PMID:21177474 MGI:4947032 NCBI chrNW_004936594:3,855,071...3,864,034
Ensembl chrNW_004936594:3,855,150...3,858,317 		JBrowse link
G Prkcd protein kinase C delta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:3,892,625...3,923,467
Ensembl chrNW_004936473:3,892,366...3,923,515 		JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936680:1,065,375...1,240,909
Ensembl chrNW_004936680:1,065,937...1,240,875 		JBrowse link
G Atxn3 ataxin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:306,400...347,161
Ensembl chrNW_004936733:310,836...347,112 		JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16601693) Ensembl
MGI		 PMID:16601693 GO_REF:0000107 NCBI chrNW_004936501:599,963...633,837
Ensembl chrNW_004936501:599,919...633,873 		JBrowse link
G Bcap31 B cell receptor associated protein 31 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:582,689...614,800
Ensembl chrNW_004936809:582,649...615,079 		JBrowse link
G Ccdc22 coiled-coil domain containing 22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936721:1,107,697...1,118,313
Ensembl chrNW_004936721:1,107,866...1,118,050 		JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 NOT|involved_in ISO (PMID:16173922) UniProt PMID:16173922 NCBI chrNW_004936490:13,345,443...13,355,841
Ensembl chrNW_004936490:13,345,443...13,355,841 		JBrowse link
G Clu clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:499,745...513,515
Ensembl chrNW_004936675:499,199...513,836 		JBrowse link
G Disc1 DISC1 scaffold protein acts_upstream_of_or_within ISO (PMID:20880836) MGI PMID:20880836 NCBI chrNW_004936484:19,151,752...19,237,435 JBrowse link
G Egf epidermal growth factor involved_in ISO (MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:4887523 NCBI chrNW_004936563:1,058,803...1,181,393 JBrowse link
G Fbxo22 F-box protein 22 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19319192) Ensembl
MGI		 PMID:19319192 GO_REF:0000107 NCBI chrNW_004936471:36,232,749...36,255,772
Ensembl chrNW_004936471:36,232,583...36,255,672 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,091,115...9,102,101
Ensembl chrNW_004936475:9,091,176...9,102,109 		JBrowse link
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936790:1,210,842...1,298,577
Ensembl chrNW_004936790:1,212,536...1,298,566 		JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:3803048|PMID:18619870)
(MGI:6478861|PMID:24638062)		 ARUK-UCL PMID:18619870 PMID:24638062 MGI:3803048 MGI:6478861 NCBI chrNW_004936474:14,102,080...14,119,592
Ensembl chrNW_004936474:14,102,423...14,119,558 		JBrowse link
G LOC101957772 BEN domain-containing protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:29,600,130...29,647,142
Ensembl chrNW_004936474:29,599,327...29,647,228 		JBrowse link
G Magef1 MAGE family member F1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936578:5,178,399...5,180,058
Ensembl chrNW_004936578:5,178,609...5,179,547 		JBrowse link
G Pten phosphatase and tensin homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936735:1,252,414...1,338,318
Ensembl chrNW_004936735:1,252,414...1,338,323 		JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISO (MGI:5306293|PMID:18206965) UniProt PMID:18206965 MGI:5306293 NCBI chrNW_004936470:10,379,855...10,578,531
Ensembl chrNW_004936470:10,379,872...10,578,543 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:216,970...325,670
Ensembl chrNW_004936675:275,288...324,810 		JBrowse link
G Rnf139 ring finger protein 139 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:23,157,312...23,168,565
Ensembl chrNW_004936470:23,152,765...23,168,571 		JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:1,599,453...1,616,480
Ensembl chrNW_004936588:1,598,164...1,616,599 		JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936750:1,381,864...1,406,736
Ensembl chrNW_004936750:1,381,851...1,407,323 		JBrowse link
G Sumo3 small ubiquitin like modifier 3 acts_upstream_of_or_within ISO (PMID:18644859) MGI PMID:18644859 NCBI chrNW_004936778:1,392,110...1,412,153 JBrowse link
G Tgfb1i1 transforming growth factor beta 1 induced transcript 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936543:8,347,343...8,352,909
Ensembl chrNW_004936543:8,347,329...8,353,051 		JBrowse link
G Traf7 TNF receptor associated factor 7 involved_in ISO (PMID:21518757) UniProt PMID:21518757 NCBI chrNW_004936694:1,868,309...1,886,772 JBrowse link
G Trim67 tripartite motif containing 67 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22337885) Ensembl
MGI		 PMID:22337885 GO_REF:0000107 NCBI chrNW_004936484:19,456,756...19,495,047
Ensembl chrNW_004936484:19,456,759...19,492,103 		JBrowse link
G Vcp valosin containing protein ISO RGD PMID:16103111 RGD:1599730 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
prenylated protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyox1 prenylcysteine oxidase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936491:14,422,683...14,439,599
Ensembl chrNW_004936491:14,422,638...14,439,569 		JBrowse link
G Pcyox1l prenylcysteine oxidase 1 like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936504:5,495,095...5,505,225
Ensembl chrNW_004936504:5,492,898...5,505,261 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11399759) Ensembl
MGI		 PMID:11399759 GO_REF:0000107 NCBI chrNW_004936474:22,035,059...22,077,846
Ensembl chrNW_004936474:22,034,801...22,077,986 		JBrowse link
prenylcysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyox1 prenylcysteine oxidase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12151402) InterPro
MGI
Ensembl
UniProt		 PMID:12151402 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936491:14,422,683...14,439,599
Ensembl chrNW_004936491:14,422,638...14,439,569 		JBrowse link
G Pcyox1l prenylcysteine oxidase 1 like involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936504:5,495,095...5,505,225
Ensembl chrNW_004936504:5,492,898...5,505,261 		JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936769:744,862...758,086
Ensembl chrNW_004936769:744,864...758,452 		JBrowse link
G LOC101964315 proline dehydrogenase 1, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936619:4,185,962...4,203,720 JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936570:522,275...531,300
Ensembl chrNW_004936570:522,290...531,241 		JBrowse link
proline catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh4a1 aldehyde dehydrogenase 4 family member A1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 NCBI chrNW_004936474:5,217,601...5,246,718
Ensembl chrNW_004936474:5,218,686...5,246,664 		JBrowse link
G LOC101964315 proline dehydrogenase 1, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936619:4,185,962...4,203,720 JBrowse link
G Prodh2 proline dehydrogenase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936570:522,275...531,300
Ensembl chrNW_004936570:522,290...531,241 		JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:26,079,298...26,095,466
Ensembl chrNW_004936475:26,079,275...26,089,889 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,159,654...2,161,657 JBrowse link
proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ate1 arginyltransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25970626) MGI
Ensembl		 PMID:25970626 GO_REF:0000107 NCBI chrNW_004936486:10,714,287...10,854,982
Ensembl chrNW_004936486:10,713,527...10,856,345 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,866,235...1,885,266
Ensembl chrNW_004936727:1,873,413...1,885,366 		JBrowse link
G Brinp1 BMP/retinoic acid inducible neural specific 1 acts_upstream_of_or_within ISO (PMID:25732823) MGI PMID:25732823 NCBI chrNW_004936487:7,845,799...8,019,167
Ensembl chrNW_004936487:7,845,351...8,019,190 		JBrowse link
G Cul4b cullin 4B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25970626) MGI
Ensembl		 PMID:25970626 GO_REF:0000107 NCBI chrNW_004936479:9,490,717...9,535,998
Ensembl chrNW_004936479:9,479,133...9,534,262 		JBrowse link
G Ddb1 damage specific DNA binding protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25970626) MGI
Ensembl		 PMID:25970626 GO_REF:0000107 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598 		JBrowse link
G Ddi1 DNA damage inducible 1 homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:4,086,113...4,088,860
Ensembl chrNW_004936551:4,086,744...4,088,006 		JBrowse link
G Derl1 derlin 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936470:24,262,401...24,286,713
Ensembl chrNW_004936470:24,262,091...24,286,577 		JBrowse link
G Derl2 derlin 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936677:2,328,783...2,342,068
Ensembl chrNW_004936677:2,328,904...2,342,080 		JBrowse link
G Derl3 derlin 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936619:1,271,980...1,275,212
Ensembl chrNW_004936619:1,271,797...1,275,214 		JBrowse link
G Dtx4 deltex E3 ubiquitin ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:3,433,760...3,467,863
Ensembl chrNW_004936581:3,437,489...3,467,869 		JBrowse link
G Fbxo44 F-box protein 44 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25970626) MGI
Ensembl		 PMID:25970626 GO_REF:0000107 NCBI chrNW_004936474:526,191...531,825
Ensembl chrNW_004936474:525,862...532,152 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO (PMID:35733270) MGI PMID:35733270 NCBI chrNW_004936708:238,302...362,537
Ensembl chrNW_004936708:238,268...362,519 		JBrowse link
G LOC101974307 protein SCO1 homolog, mitochondrial acts_upstream_of ISO (PMID:25683716) MGI PMID:25683716 NCBI chrNW_004936595:3,523,789...3,537,933
Ensembl chrNW_004936595:3,523,779...3,538,150 		JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936643:2,455,496...2,507,185
Ensembl chrNW_004936643:2,455,328...2,507,225 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:15,206,194...15,213,858
Ensembl chrNW_004936490:15,206,191...15,213,867 		JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 acts_upstream_of_or_within ISO (PMID:26797281) MGI PMID:26797281 NCBI chrNW_004936527:6,726,363...6,756,445
Ensembl chrNW_004936527:6,726,357...6,755,318 		JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:15901672) UniProt PMID:15901672 NCBI chrNW_004936497:4,985,995...4,986,720 JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:14627652) MGI PMID:14627652 NCBI chrNW_004936724:1,747,015...1,780,298
Ensembl chrNW_004936724:1,747,005...1,778,141 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:2,031,894...2,042,294
Ensembl chrNW_004936581:2,031,822...2,042,424 		JBrowse link
G Psma1 proteasome 20S subunit alpha 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936528:4,195,072...4,207,263
Ensembl chrNW_004936528:4,195,072...4,209,558 		JBrowse link
G Psma2 proteasome 20S subunit alpha 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936478:18,083,525...18,095,088
Ensembl chrNW_004936478:18,079,863...18,095,117 		JBrowse link
G Psma3 proteasome 20S subunit alpha 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936495:2,650,668...2,672,192
Ensembl chrNW_004936495:2,650,629...2,673,435 		JBrowse link
G Psma4 proteasome 20S subunit alpha 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:36,508,045...36,516,033
Ensembl chrNW_004936471:36,508,017...36,516,062 		JBrowse link
G Psma5 proteasome 20S subunit alpha 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936704:905,277...928,364
Ensembl chrNW_004936704:905,248...929,215 		JBrowse link
G Psma6 proteasome 20S subunit alpha 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936494:9,443,176...9,467,697 JBrowse link
G Psma7 proteasome 20S subunit alpha 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936514:9,808,966...9,819,548
Ensembl chrNW_004936514:9,806,624...9,813,723 		JBrowse link
G Psma8 proteasome 20S subunit alpha 8 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936550:5,305,851...5,358,717
Ensembl chrNW_004936550:5,305,851...5,358,717 		JBrowse link
G Psmb2 proteasome 20S subunit beta 2 involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936474:18,151,717...18,183,384
Ensembl chrNW_004936474:18,151,490...18,183,440 		JBrowse link
G Rnf41 ring finger protein 41 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:605,302...630,645
Ensembl chrNW_004936646:605,302...631,022 		JBrowse link
G Rsc1a1 regulator of solute carriers 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:3,284,512...3,312,366
Ensembl chrNW_004936474:3,307,377...3,312,066
Ensembl chrNW_004936474:3,307,377...3,312,066 		JBrowse link
G Socs6 suppressor of cytokine signaling 6 acts_upstream_of_or_within ISO (PMID:20007709) MGI PMID:20007709 NCBI chrNW_004936964:174,165...179,813 JBrowse link
G Trim21 tripartite motif containing 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:690,481...697,305
Ensembl chrNW_004936498:690,480...699,890 		JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17981124) Ensembl
MGI		 PMID:17981124 GO_REF:0000107 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
proteasomal ubiquitin-independent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enc1 ectodermal-neural cortex 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936549:2,008,365...2,020,948
Ensembl chrNW_004936549:2,008,363...2,020,948 		JBrowse link
G Midn midnolin involved_in ISO (PMID:37616343) UniProt PMID:37616343 NCBI chrNW_004936588:620,353...627,113
Ensembl chrNW_004936588:620,840...625,443 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262 		JBrowse link
G Psme4 proteasome activator subunit 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936491:404,921...503,783
Ensembl chrNW_004936491:404,912...504,326 		JBrowse link
proteasome-mediated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 acts_upstream_of_or_within ISO (PMID:16461359) MGI PMID:16461359 NCBI chrNW_004936527:6,510,223...6,563,656
Ensembl chrNW_004936527:6,510,223...6,563,154 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15937334) Ensembl
MGI		 PMID:15937334 GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093 		JBrowse link
G Ambra1 autophagy and beclin 1 regulator 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936562:2,493,823...2,676,868
Ensembl chrNW_004936562:2,493,774...2,676,912 		JBrowse link
G Ankrd9 ankyrin repeat domain 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936835:608,461...613,157
Ensembl chrNW_004936835:611,156...612,918 		JBrowse link
G Appbp2 amyloid beta precursor protein binding protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:2,021,887...2,078,739
Ensembl chrNW_004936490:2,021,859...2,079,211 		JBrowse link
G Armc8 armadillo repeat containing 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936540:527,977...626,628
Ensembl chrNW_004936540:527,965...626,607 		JBrowse link
G Arrb1 arrestin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:4,089,621...4,172,749
Ensembl chrNW_004936498:4,094,893...4,172,755 		JBrowse link
G Arrb2 arrestin beta 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:3,173,054...3,181,475
Ensembl chrNW_004936677:3,172,925...3,181,520 		JBrowse link
G Asb2 ankyrin repeat and SOCS box containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:1,813,569...1,849,805
Ensembl chrNW_004936733:1,813,548...1,849,806 		JBrowse link
G Atxn3 ataxin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:306,400...347,161
Ensembl chrNW_004936733:310,836...347,112 		JBrowse link
G Aurka aurora kinase A acts_upstream_of ISO (PMID:17060449) MGI PMID:17060449 NCBI chrNW_004936875:295,238...310,457 JBrowse link
G Bag6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,866,235...1,885,266
Ensembl chrNW_004936727:1,873,413...1,885,366 		JBrowse link
G Bfar bifunctional apoptosis regulator involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:2,811,967...2,839,357
Ensembl chrNW_004936501:2,811,907...2,841,258 		JBrowse link
G Birc2 baculoviral IAP repeat containing 2 involved_in ISO (PMID:11907583) UniProt PMID:11907583 NCBI chrNW_004936551:5,515,904...5,535,864 JBrowse link
G Bmal1 basic helix-loop-helix ARNT like 1 involved_in ISO (MGI:5495336|PMID:23395176) UniProt PMID:23395176 MGI:5495336 NCBI chrNW_004936528:5,167,611...5,239,128
Ensembl chrNW_004936528:5,164,481...5,239,128 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987 		JBrowse link
G Cd2ap CD2 associated protein ISO RGD PMID:15001553 RGD:1302417 NCBI chrNW_004936476:12,890,595...12,989,046
Ensembl chrNW_004936476:12,890,468...12,987,843 		JBrowse link
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:160,066...167,259
Ensembl chrNW_004936588:161,455...165,656 		JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of ISO (PMID:24949970) MGI PMID:24949970 NCBI chrNW_004936530:9,089,478...9,264,563
Ensembl chrNW_004936530:9,089,476...9,264,592 		JBrowse link
G Clock clock circadian regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936482:17,789,834...17,900,371
Ensembl chrNW_004936482:17,794,134...17,845,303 		JBrowse link
G Cop1 COP1 E3 ubiquitin ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936481:12,262,415...12,437,627
Ensembl chrNW_004936481:12,262,409...12,437,571 		JBrowse link
G Crbn cereblon involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:2,834,134...2,854,116
Ensembl chrNW_004936577:2,833,972...2,851,174 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:29,999,542...30,034,610
Ensembl chrNW_004936473:29,999,562...30,038,293 		JBrowse link
G Cul1 cullin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:4,971,002...5,019,465
Ensembl chrNW_004936527:4,971,000...5,019,562 		JBrowse link
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20811152) Ensembl
MGI		 PMID:20811152 GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G Cul4a cullin 4A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16467204) Ensembl
MGI		 PMID:16467204 GO_REF:0000107 NCBI chrNW_004936472:409,083...432,442
Ensembl chrNW_004936472:408,659...432,379 		JBrowse link
G Dcaf11 DDB1 and CUL4 associated factor 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:414,830...422,722
Ensembl chrNW_004936722:414,831...422,694 		JBrowse link
G Dcaf13 DDB1 and CUL4 associated factor 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:40,321,103...40,357,001
Ensembl chrNW_004936470:40,320,073...40,356,993 		JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in IEA Ensembl
TreeGrafter
UniProt		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598 		JBrowse link
G Ddit3 DNA damage inducible transcript 3 involved_in ISO (PMID:17872950) UniProt PMID:17872950 NCBI chrNW_004936646:1,665,019...1,669,212 JBrowse link
G Derl1 derlin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:24,262,401...24,286,713
Ensembl chrNW_004936470:24,262,091...24,286,577 		JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:21625540) UniProt PMID:21625540 NCBI chrNW_004936569:1,689,926...1,697,179
Ensembl chrNW_004936569:1,689,507...1,698,954 		JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936557:1,347,991...1,389,836
Ensembl chrNW_004936557:1,347,991...1,389,836 		JBrowse link
G Dtx4 deltex E3 ubiquitin ligase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:3,433,760...3,467,863
Ensembl chrNW_004936581:3,437,489...3,467,869 		JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 acts_upstream_of_or_within ISO (PMID:16431915) MGI PMID:16431915 NCBI chrNW_004936481:5,352,964...5,424,944
Ensembl chrNW_004936481:5,352,956...5,424,944 		JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24914213) Ensembl
MGI		 PMID:24914213 GO_REF:0000107 NCBI chrNW_004936625:761,013...819,826
Ensembl chrNW_004936625:738,124...821,566 		JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936480:7,560,055...7,609,650
Ensembl chrNW_004936480:7,560,023...7,609,648 		JBrowse link
G Faf2 Fas associated factor family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:710,168...772,455
Ensembl chrNW_004936597:710,100...772,765 		JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 involved_in ISO (PMID:30190310) UniProt PMID:30190310 NCBI chrNW_004936531:2,674,319...3,179,325 JBrowse link
G Fbxl19 F-box and leucine rich repeat protein 19 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22660580) MGI
Ensembl		 PMID:22660580 GO_REF:0000107 NCBI chrNW_004936501:13,312,311...13,332,599
Ensembl chrNW_004936501:13,312,304...13,332,644 		JBrowse link
G Fbxl22 F-box and leucine rich repeat protein 22 acts_upstream_of_or_within ISO (PMID:22972877) MGI PMID:22972877 NCBI chrNW_004936471:24,131,046...24,139,835
Ensembl chrNW_004936471:24,132,226...24,136,676 		JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,259,066...4,280,501
Ensembl chrNW_004936511:4,258,548...4,283,285 		JBrowse link
G Fbxo22 F-box protein 22 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19319192) Ensembl
MGI		 PMID:19319192 GO_REF:0000107 NCBI chrNW_004936471:36,232,749...36,255,772
Ensembl chrNW_004936471:36,232,583...36,255,672 		JBrowse link
G Fbxo45 F-box protein 45 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936784:1,162,950...1,177,407
Ensembl chrNW_004936784:1,162,950...1,179,068 		JBrowse link
G Fbxo7 F-box protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:7,261,442...7,276,779
Ensembl chrNW_004936492:7,261,009...7,276,943 		JBrowse link
G Fbxo9 F-box protein 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:7,769,355...7,809,688
Ensembl chrNW_004936476:7,769,295...7,810,235 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (PMID:10644755), (PMID:20347421) UniProt PMID:10644755 PMID:20347421 NCBI chrNW_004936609:3,256,658...3,341,918
Ensembl chrNW_004936609:3,256,657...3,341,994 		JBrowse link
G Fbxw5 F-box and WD repeat domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:988,615...993,053
Ensembl chrNW_004936669:988,963...993,843 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764 		JBrowse link
G Fem1b fem-1 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:28,115,873...28,135,834
Ensembl chrNW_004936471:28,115,684...28,135,825 		JBrowse link
G Fem1c fem-1 homolog C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:678,171...706,019
Ensembl chrNW_004936742:677,746...705,350 		JBrowse link
G Gba1 glucosylceramidase beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23707074) Ensembl
MGI		 PMID:23707074 GO_REF:0000107 NCBI chrNW_004936580:4,715,869...4,720,752
Ensembl chrNW_004936580:4,715,408...4,720,798 		JBrowse link
G Gid4 GID complex subunit 4 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936741:1,618,522...1,635,776
Ensembl chrNW_004936741:1,620,359...1,635,799 		JBrowse link
G Gid8 GID complex subunit 8 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936514:10,422,620...10,429,272
Ensembl chrNW_004936514:10,422,617...10,431,837 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936706:266,462...277,256
Ensembl chrNW_004936706:269,126...277,256 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936494:5,761,801...5,853,673
Ensembl chrNW_004936494:5,758,347...5,851,952 		JBrowse link
G Hectd3 HECT domain E3 ubiquitin protein ligase 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:26,198,637...26,206,600
Ensembl chrNW_004936474:26,198,194...26,206,330 		JBrowse link
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:38,419,147...38,606,312
Ensembl chrNW_004936471:38,419,129...38,606,323 		JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:3,767,526...3,775,416
Ensembl chrNW_004936599:3,766,242...3,776,128 		JBrowse link
G Kbtbd7 kelch repeat and BTB domain containing 7 involved_in ISO (PMID:25684205) UniProt PMID:25684205 NCBI chrNW_004936667:389,544...394,475
Ensembl chrNW_004936667:389,858...391,900 		JBrowse link
G Kcmf1 potassium channel modulatory factor 1 involved_in ISO (PMID:37891180), (PMID:38297121) UniProt PMID:37891180 PMID:38297121 NCBI chrNW_004936650:3,777,331...3,812,952
Ensembl chrNW_004936650:3,735,737...3,812,949 		JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936769:1,171,725...1,197,497
Ensembl chrNW_004936769:1,171,707...1,197,537 		JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:12,544,899...12,557,485
Ensembl chrNW_004936501:12,544,851...12,559,550 		JBrowse link
G Kctd17 potassium channel tetramerization domain containing 17 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936492:3,850,172...3,859,786
Ensembl chrNW_004936492:3,850,848...3,859,768 		JBrowse link
G Kctd2 potassium channel tetramerization domain containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:359,856...373,499
Ensembl chrNW_004936594:302,366...370,878 		JBrowse link
G Kctd5 potassium channel tetramerization domain containing 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936694:1,418,638...1,444,609 JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:24854087) UniProt PMID:24854087 NCBI chrNW_004936567:3,704,672...3,764,111 JBrowse link
G Klhdc2 kelch domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936583:256,360...269,131
Ensembl chrNW_004936583:256,394...268,998 		JBrowse link
G Klhdc3 kelch domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,913,494...16,920,108
Ensembl chrNW_004936476:16,913,493...16,918,524 		JBrowse link
G Klhl20 kelch like family member 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936481:14,074,169...14,111,634
Ensembl chrNW_004936481:14,071,470...14,111,838 		JBrowse link
G Klhl22 kelch like family member 22 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936619:2,854,915...2,899,386
Ensembl chrNW_004936619:2,854,803...2,899,460 		JBrowse link
G Klhl3 kelch like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:4,592,654...4,696,348
Ensembl chrNW_004936597:4,592,621...4,696,377 		JBrowse link
G Klhl40 kelch like family member 40 acts_upstream_of ISO (PMID:24960163) MGI PMID:24960163 NCBI chrNW_004936695:2,417,938...2,424,622
Ensembl chrNW_004936695:2,414,573...2,424,702 		JBrowse link
G Klhl42 kelch like family member 42 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936760:5,049...27,134
Ensembl chrNW_004936760:5,043...27,134 		JBrowse link
G LOC101955686 PEST proteolytic signal-containing nuclear protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936556:2,546,229...2,550,872 JBrowse link
G LOC101958870 PEST proteolytic signal-containing nuclear protein-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936558:2,683,427...2,684,347 JBrowse link
G LOC101961559 E3 ubiquitin-protein ligase RNF126 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:231,723...237,969
Ensembl chrNW_004936588:255,639...260,291
Ensembl chrNW_004936588:255,639...260,291 		JBrowse link
G LOC101966621 BTB/POZ domain-containing protein KCTD5-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936538:4,333,270...4,344,005 JBrowse link
G LOC101972090 26S proteasome regulatory subunit 4-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936511:7,890,654...7,892,253 JBrowse link
G Maea macrophage erythroblast attacher, E3 ubiquitin ligase involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936477:21,959,465...21,996,395
Ensembl chrNW_004936477:21,959,465...21,996,937 		JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936643:2,455,496...2,507,185
Ensembl chrNW_004936643:2,455,328...2,507,225 		JBrowse link
G Mta1 metastasis associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936621:117,785...140,917
Ensembl chrNW_004936621:117,785...140,926 		JBrowse link
G Mtm1 myotubularin 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:23695157) Ensembl
MGI		 PMID:23695157 GO_REF:0000107 NCBI chrNW_004936714:1,792,893...1,870,338
Ensembl chrNW_004936714:1,792,845...1,870,389 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19386237) Ensembl
MGI		 PMID:19386237 GO_REF:0000107 NCBI chrNW_004936490:17,305,033...17,312,167
Ensembl chrNW_004936490:17,304,586...17,314,521 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:6,106,284...6,318,339
Ensembl chrNW_004936497:6,106,268...6,318,354 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:6,589,967...6,621,171
Ensembl chrNW_004936509:6,590,630...6,620,262 		JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24914213) Ensembl
MGI
TreeGrafter		 PMID:24914213 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936552:3,891,350...3,893,566
Ensembl chrNW_004936552:3,892,372...3,893,559 		JBrowse link
G Nsfl1c NSFL1 cofactor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936485:17,217,462...17,238,253
Ensembl chrNW_004936485:17,217,462...17,238,628 		JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO (PMID:25470037) MGI PMID:25470037 NCBI chrNW_004936721:847,360...876,912
Ensembl chrNW_004936721:848,324...877,068 		JBrowse link
G Pbk PDZ binding kinase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21715333) Ensembl
MGI		 PMID:21715333 GO_REF:0000107 NCBI chrNW_004936675:704,001...722,769
Ensembl chrNW_004936675:704,516...722,755 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:19881509) UniProt PMID:19881509 NCBI chrNW_004936512:10,732,129...10,754,885
Ensembl chrNW_004936512:10,732,151...10,756,912 		JBrowse link
G Pcnp PEST proteolytic signal containing nuclear protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936630:1,800,458...1,818,494 JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:8,985,074...9,040,863
Ensembl chrNW_004936491:8,985,074...9,041,244 		JBrowse link
G Pja2 praja ring finger ubiquitin ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936531:4,022,175...4,093,404
Ensembl chrNW_004936531:4,021,711...4,068,459 		JBrowse link
G Plaa phospholipase A2 activating protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936611:2,665,294...2,698,372
Ensembl chrNW_004936611:2,665,370...2,700,538 		JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:33,135,186...33,173,218
Ensembl chrNW_004936471:33,135,164...33,177,666 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (PMID:15748170) MGI PMID:15748170 NCBI chrNW_004936724:1,747,015...1,780,298
Ensembl chrNW_004936724:1,747,005...1,778,141 		JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta acts_upstream_of_or_within ISO (PMID:16717086) MGI PMID:16717086 NCBI chrNW_004936792:622,105...633,800 JBrowse link
G Ppp2r5c protein phosphatase 2 regulatory subunit B'gamma acts_upstream_of_or_within ISO (PMID:16717086) MGI PMID:16717086 NCBI chrNW_004936835:54,478...192,486
Ensembl chrNW_004936835:96,930...192,756 		JBrowse link
G Prame PRAME nuclear receptor transcriptional regulator involved_in ISO (PMID:26138980) UniProt PMID:26138980 NCBI chrNW_004936619:1,748,337...1,751,748 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Psma5 proteasome 20S subunit alpha 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936704:905,277...928,364
Ensembl chrNW_004936704:905,248...929,215 		JBrowse link
G Psmb3 proteasome 20S subunit beta 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:14,154,992...14,163,720
Ensembl chrNW_004936490:14,154,968...14,163,737 		JBrowse link
G Psmb5 proteasome 20S subunit beta 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15198663) Ensembl
MGI		 PMID:15198663 GO_REF:0000107 NCBI chrNW_004936722:1,285,488...1,293,637
Ensembl chrNW_004936722:1,285,482...1,295,106 		JBrowse link
G Psmc1 proteasome 26S subunit, ATPase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936488:17,455,612...17,468,933
Ensembl chrNW_004936488:17,455,461...17,469,527 		JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936479:20,150,738...20,167,765
Ensembl chrNW_004936479:20,148,632...20,168,130 		JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936562:1,810,883...1,817,040
Ensembl chrNW_004936562:1,810,864...1,823,077 		JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936661:2,522,665...2,528,279
Ensembl chrNW_004936661:2,522,615...2,528,284 		JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:4,470,210...4,475,233 JBrowse link
G Psmc6 proteasome 26S subunit, ATPase 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936697:2,122,727...2,143,988
Ensembl chrNW_004936697:2,121,677...2,144,066 		JBrowse link
G Psmd1 proteasome 26S subunit, non-ATPase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936525:5,672,013...5,762,035
Ensembl chrNW_004936525:5,668,186...5,762,364 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:17,494,137...17,601,045
Ensembl chrNW_004936469:17,494,134...17,601,045 		JBrowse link
G Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936578:5,570,969...5,580,334
Ensembl chrNW_004936578:5,570,817...5,580,617 		JBrowse link
G Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:1,457,232...1,470,274
Ensembl chrNW_004936580:1,456,958...1,471,303 		JBrowse link
G Psmd6 proteasome 26S subunit, non-ATPase 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936637:2,403,456...2,413,772
Ensembl chrNW_004936637:2,403,450...2,416,917 		JBrowse link
G Psmd7 proteasome 26S subunit, non-ATPase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:19,959,022...19,967,393
Ensembl chrNW_004936475:19,958,996...19,967,412 		JBrowse link
G Psmd8 proteasome 26S subunit, non-ATPase 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936801:1,137,480...1,144,287
Ensembl chrNW_004936801:1,137,423...1,148,594 		JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936485:17,485,600...17,517,642
Ensembl chrNW_004936485:17,485,602...17,517,696 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936659:2,001,356...2,007,520
Ensembl chrNW_004936659:2,001,301...2,010,215 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936559:5,224,679...5,264,853
Ensembl chrNW_004936559:5,226,223...5,264,491 		JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:18,057,569...18,071,787
Ensembl chrNW_004936485:18,057,534...18,071,816 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:10230407), (PMID:20389280), (PMID:23453970), (PMID:29769719), (PMID:34480022) UniProt PMID:10230407 PMID:20389280 PMID:23453970 PMID:29769719 PMID:34480022 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835 		JBrowse link
G Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:139,690...203,600
Ensembl chrNW_004936538:139,723...203,600 		JBrowse link
G Rhobtb3 Rho related BTB domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936523:7,562,054...7,618,380
Ensembl chrNW_004936523:7,559,335...7,617,786 		JBrowse link
G Rmnd5a required for meiotic nuclear division 5 homolog A involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936712:892,777...927,930
Ensembl chrNW_004936712:892,777...927,936 		JBrowse link
G Rmnd5b required for meiotic nuclear division 5 homolog B involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936647:526,500...540,586
Ensembl chrNW_004936647:522,761...540,923 		JBrowse link
G Rnf122 ring finger protein 122 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936766:385,769...400,229
Ensembl chrNW_004936766:386,176...399,234 		JBrowse link
G Rnf186 ring finger protein 186 involved_in ISO (PMID:23896122) UniProt PMID:23896122 NCBI chrNW_004936474:5,947,077...5,947,772 JBrowse link
G Rnf187 ring finger protein 187 involved_in ISO (PMID:20852630) UniProt PMID:20852630 NCBI chrNW_004937135:64,950...70,083 JBrowse link
G Rnf216 ring finger protein 216 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936765:452,755...592,358
Ensembl chrNW_004936765:473,025...589,681 		JBrowse link
G Rnf34 ring finger protein 34 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936558:2,901,386...2,918,976
Ensembl chrNW_004936558:2,901,512...2,919,018 		JBrowse link
G Rnf4 ring finger protein 4 involved_in ISO (PMID:18408734), (PMID:20212317), (PMID:20943951) UniProt PMID:18408734 PMID:20212317 PMID:20943951 NCBI chrNW_004936477:21,025,040...21,055,821 JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of ISO (PMID:17981124) MGI PMID:17981124 NCBI chrNW_004936512:5,932,594...5,989,819
Ensembl chrNW_004936512:5,937,814...5,989,855 		JBrowse link
G Sh3bgrl SH3 domain binding glutamate rich protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936547:2,661,747...2,737,338
Ensembl chrNW_004936547:2,661,575...2,739,418 		JBrowse link
G Sharpin SHANK associated RH domain interactor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:8,076,605...8,081,872
Ensembl chrNW_004936470:8,077,019...8,086,600 		JBrowse link
G Siah1 siah E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:1,589,997...1,621,506
Ensembl chrNW_004936475:1,590,004...1,594,894 		JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936758:1,115,980...1,132,225
Ensembl chrNW_004936758:1,116,056...1,213,442 		JBrowse link
G Siah3 siah E3 ubiquitin protein ligase family member 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936857:341,879...406,806
Ensembl chrNW_004936857:339,615...406,806 		JBrowse link
G Sirt1 sirtuin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:10,296,097...10,316,673
Ensembl chrNW_004936521:10,296,097...10,322,215 		JBrowse link
G Sirt2 sirtuin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936661:1,828,868...1,849,892
Ensembl chrNW_004936661:1,828,831...1,850,000 		JBrowse link
G Skp1 S-phase kinase associated protein 1 involved_in ISO (PMID:15145941), (PMID:34480022) UniProt PMID:15145941 PMID:34480022 NCBI chrNW_004936647:1,073,647...1,090,841
Ensembl chrNW_004936647:1,072,855...1,094,139 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:5,635,856...5,664,057
Ensembl chrNW_004936518:5,637,331...5,664,778 		JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936750:1,381,864...1,406,736
Ensembl chrNW_004936750:1,381,851...1,407,323 		JBrowse link
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936541:5,046,147...5,147,416
Ensembl chrNW_004936541:5,046,148...5,106,008 		JBrowse link
G Spop speckle type BTB/POZ protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20811152) Ensembl
MGI
TreeGrafter		 PMID:20811152 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:11,894,449...11,969,730
Ensembl chrNW_004936490:11,894,406...11,970,155 		JBrowse link
G Spopl speckle type BTB/POZ protein like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936469:37,608,044...37,661,337
Ensembl chrNW_004936469:37,603,803...37,661,436 		JBrowse link
G Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936623:3,448,787...3,455,670
Ensembl chrNW_004936623:3,427,761...3,455,670 		JBrowse link
G Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936709:945,322...948,101
Ensembl chrNW_004936709:945,201...951,441 		JBrowse link
G Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936694:2,212,022...2,217,409
Ensembl chrNW_004936694:2,212,299...2,217,140 		JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936540:2,953,837...3,021,430
Ensembl chrNW_004936540:2,953,831...3,021,485 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:328,767...330,963
Ensembl chrNW_004936501:326,451...330,983 		JBrowse link
G Tbl1x transducin beta like 1 X-linked involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14980219) Ensembl
MGI		 PMID:14980219 GO_REF:0000107 NCBI chrNW_004936644:237,638...282,470 JBrowse link
G Tbl1xr1 TBL1X/Y related 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14980219) Ensembl
MGI		 PMID:14980219 GO_REF:0000107 NCBI chrNW_004936566:5,721,541...5,861,838
Ensembl chrNW_004936566:5,790,532...5,861,838 		JBrowse link
G Tbx21 T-box transcription factor 21 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:13,546,405...13,558,635
Ensembl chrNW_004936490:13,546,292...13,558,635 		JBrowse link
G Tnfaip1 TNF alpha induced protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:4,491,915...4,503,887
Ensembl chrNW_004936538:4,491,925...4,503,645 		JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,219,101...1,229,937
Ensembl chrNW_004936524:1,219,907...1,229,723 		JBrowse link
G Trim13 tripartite motif containing 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936565:2,976,681...2,989,036
Ensembl chrNW_004936565:2,976,729...2,989,088 		JBrowse link
G Trim2 tripartite motif containing 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936576:88,163...202,944
Ensembl chrNW_004936576:88,024...202,958 		JBrowse link
G Trim26 tripartite motif containing 26 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936723:827,847...859,860
Ensembl chrNW_004936723:829,568...859,817 		JBrowse link
G Trim3 tripartite motif containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936842:494,460...524,305
Ensembl chrNW_004936842:501,127...524,347 		JBrowse link
G Trim38 tripartite motif containing 38 acts_upstream_of_or_within ISO (PMID:22539786) MGI PMID:22539786 NCBI chrNW_004936671:1,841,722...1,853,804
Ensembl chrNW_004936671:1,841,662...1,854,306 		JBrowse link
G Trim45 tripartite motif containing 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936627:2,271,942...2,281,948
Ensembl chrNW_004936627:2,271,931...2,282,090 		JBrowse link
G Trim63 tripartite motif containing 63 acts_upstream_of_or_within ISO (PMID:15601779) MGI PMID:15601779 NCBI chrNW_004936474:10,598,571...10,610,197
Ensembl chrNW_004936474:10,598,561...10,633,001 		JBrowse link
G Trim71 tripartite motif containing 71 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936473:23,223,984...23,290,177
Ensembl chrNW_004936473:23,224,588...23,290,169 		JBrowse link
G Trim72 tripartite motif containing 72 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23965929) Ensembl
MGI
TreeGrafter		 PMID:23965929 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:13,559,108...13,568,439
Ensembl chrNW_004936501:13,560,374...13,568,912 		JBrowse link
G Trim9 tripartite motif containing 9 involved_in ISO (PMID:20085810) UniProt PMID:20085810 NCBI chrNW_004936495:14,561,765...14,666,043
Ensembl chrNW_004936495:14,562,553...14,664,033 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936525:6,539,234...6,690,457
Ensembl chrNW_004936525:6,539,191...6,690,457 		JBrowse link
G Ube2a ubiquitin conjugating enzyme E2 A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936479:10,330,666...10,340,268
Ensembl chrNW_004936479:10,330,632...10,340,367 		JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936647:891,357...913,963
Ensembl chrNW_004936647:891,996...911,033 		JBrowse link
G Ube2d1 ubiquitin conjugating enzyme E2 D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:4,621,702...4,655,200
Ensembl chrNW_004936614:4,621,127...4,655,244 		JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 involved_in
acts_upstream_of_or_within		 ISO (PMID:20347421)
(PMID:15601779)		 UniProt
MGI		 PMID:15601779 PMID:20347421 NCBI chrNW_004936520:555,878...588,052
Ensembl chrNW_004936520:556,231...588,752 		JBrowse link
G Ube2h ubiquitin conjugating enzyme E2 H involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23965929) Ensembl
MGI		 PMID:23965929 GO_REF:0000107 NCBI chrNW_004936579:5,253,842...5,359,834
Ensembl chrNW_004936579:5,253,795...5,360,027 		JBrowse link
G Ube2i ubiquitin conjugating enzyme E2 I ISO RGD PMID:9013644 RGD:730030 NCBI chrNW_004936694:2,561,701...2,571,284
Ensembl chrNW_004936694:2,561,681...2,576,647 		JBrowse link
G Ube2k ubiquitin conjugating enzyme E2 K involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936482:7,244,972...7,323,263
Ensembl chrNW_004936482:7,244,967...7,323,266 		JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:35927303) UniProt PMID:35927303
G Ube2u ubiquitin conjugating enzyme E2 U involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936692:1,714,533...1,765,348
Ensembl chrNW_004936692:1,714,511...1,792,910 		JBrowse link
G Ube2w ubiquitin conjugating enzyme E2 W involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936648:2,517,951...2,575,805
Ensembl chrNW_004936648:2,521,432...2,575,815 		JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:41,187,665...41,290,345
Ensembl chrNW_004936471:41,187,612...41,283,517 		JBrowse link
G Ube3d ubiquitin protein ligase E3D involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936510:7,718,552...7,862,946
Ensembl chrNW_004936510:7,718,535...7,862,998 		JBrowse link
G Ube4b ubiquitination factor E4B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23509263) MGI
Ensembl		 PMID:23509263 GO_REF:0000107 NCBI chrNW_004936623:3,934,439...4,051,083
Ensembl chrNW_004936623:3,934,310...4,051,146 		JBrowse link
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 involved_in ISO (PMID:15548684) UniProt PMID:15548684 NCBI chrNW_004936471:6,171,655...6,313,853
Ensembl chrNW_004936471:6,171,593...6,313,937 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (PMID:15548684) UniProt PMID:15548684 NCBI chrNW_004936476:17,178,981...17,322,600
Ensembl chrNW_004936476:17,181,214...17,322,163 		JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:37891180), (PMID:38297121) UniProt PMID:37891180 PMID:38297121 NCBI chrNW_004936474:5,373,303...5,492,950
Ensembl chrNW_004936474:5,373,186...5,493,635 		JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 involved_in ISO (PMID:29378950) UniProt PMID:29378950 NCBI chrNW_004936470:41,222,782...41,345,755
Ensembl chrNW_004936470:41,252,951...41,344,134 		JBrowse link
G Ubxn11 UBX domain protein 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:10,778,367...10,800,805
Ensembl chrNW_004936474:10,778,990...10,797,617 		JBrowse link
G Ubxn2a UBX domain protein 2A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936493:7,969,271...7,978,537
Ensembl chrNW_004936493:7,971,960...7,985,314 		JBrowse link
G Ubxn2b UBX domain protein 2B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936496:4,520,334...4,564,358
Ensembl chrNW_004936496:4,532,714...4,559,562 		JBrowse link
G Ubxn7 UBX domain protein 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936784:987,411...1,038,483 JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936550:640,331...675,703
Ensembl chrNW_004936550:635,963...675,832 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936507:11,663,069...11,692,174
Ensembl chrNW_004936507:11,660,129...11,681,366 		JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:34290272) UniProt PMID:34290272 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
G Wdr26 WD repeat domain 26 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936526:1,429,972...1,474,296
Ensembl chrNW_004936526:1,434,653...1,474,314 		JBrowse link
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936544:965,189...1,048,530
Ensembl chrNW_004936544:979,774...1,047,101 		JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:19,835,909...19,944,426
Ensembl chrNW_004936475:19,828,763...19,942,632 		JBrowse link
G Zfand2a zinc finger AN1-type containing 2A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936754:1,353,482...1,363,651
Ensembl chrNW_004936754:1,353,342...1,363,720 		JBrowse link
G Zfand2b zinc finger AN1-type containing 2B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936569:1,625,712...1,628,533
Ensembl chrNW_004936569:1,625,374...1,632,642 		JBrowse link
G Znrf1 zinc and ring finger 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:23,814,200...23,918,871
Ensembl chrNW_004936475:23,814,194...23,916,530 		JBrowse link
G Znrf2 zinc and ring finger 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936478:6,589,440...6,681,315 JBrowse link
G Znrf4 zinc and ring finger 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,142,687...3,143,793
Ensembl chrNW_004936588:3,142,736...3,143,793 		JBrowse link
G Zswim8 zinc finger SWIM-type containing 8 involved_in ISO (PMID:33184234) UniProt PMID:33184234 NCBI chrNW_004936521:5,346,971...5,363,297
Ensembl chrNW_004936521:5,346,971...5,363,332 		JBrowse link
protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acr acrosin ISO RGD PMID:28859281 RGD:13464336 NCBI chrNW_004936629:104,301...111,377 JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:19652891 RGD:2315953 NCBI chrNW_004936669:3,449,259...3,478,471
Ensembl chrNW_004936669:3,456,494...3,478,512 		JBrowse link
G Afg3l2 AFG3 like matrix AAA peptidase subunit 2 involved_in ISO (PMID:37917749), (PMID:38157846) UniProt PMID:37917749 PMID:38157846 NCBI chrNW_004936626:150,953...189,980
Ensembl chrNW_004936626:150,974...189,218 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12145204) Ensembl
MGI		 PMID:12145204 GO_REF:0000107 NCBI chrNW_004936621:620,163...639,115
Ensembl chrNW_004936621:620,074...639,093 		JBrowse link
G Ambp alpha-1-microglobulin/bikunin precursor ISO RGD PMID:11307954 RGD:6904220 NCBI chrNW_004936487:3,399,792...3,412,088 JBrowse link
G Apc APC regulator of WNT signaling pathway acts_upstream_of ISO (PMID:16478791) MGI PMID:16478791 NCBI chrNW_004936531:6,899,580...7,019,016
Ensembl chrNW_004936531:6,899,788...7,019,453 		JBrowse link
G Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610558) Ensembl
MGI		 PMID:23610558 GO_REF:0000107 NCBI chrNW_004936517:428,689...531,360
Ensembl chrNW_004936517:429,292...531,361 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:15866887) MGI PMID:15866887 NCBI chrNW_004936602:1,938,720...2,179,239
Ensembl chrNW_004936602:1,935,507...2,179,256 		JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12717450) Ensembl
MGI		 PMID:12717450 GO_REF:0000107 NCBI chrNW_004936501:599,963...633,837
Ensembl chrNW_004936501:599,919...633,873 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12843402) Ensembl
MGI		 PMID:12843402 GO_REF:0000107 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987 		JBrowse link
G Capn1 calpain 1 ISO RGD PMID:11893336 PMID:17429681 RGD:1626249 RGD:70442 NCBI chrNW_004936599:4,178,963...4,201,037
Ensembl chrNW_004936599:4,178,901...4,201,052 		JBrowse link
G Capn10 calpain 10 ISO RGD PMID:16790502 RGD:1625051 NCBI chrNW_004936745:1,029,514...1,039,524 JBrowse link
G Capn2 calpain 2 ISO RGD PMID:17402852 PMID:17429681 RGD:1626249 RGD:2303056 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682 		JBrowse link
G Capn3 calpain 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:5,667,839...5,711,822
Ensembl chrNW_004936471:5,668,169...5,711,075 		JBrowse link
G Capns1 calpain small subunit 1 ISO RGD PMID:7982961 RGD:634695 NCBI chrNW_004936922:151,791...161,655
Ensembl chrNW_004936922:151,599...164,787 		JBrowse link
G Casp3 caspase 3 involved_in ISO (PMID:16374543) RGD
UniProt		 PMID:15004018 PMID:16374543 PMID:18316105 RGD:1581919 RGD:2311460 NCBI chrNW_004936554:4,571,072...4,593,765 JBrowse link
G Casp7 caspase 7 involved_in ISO
IEA		 RGD
Ensembl		 PMID:18316105 GO_REF:0000107 RGD:2311460 NCBI chrNW_004936486:4,082,664...4,114,942
Ensembl chrNW_004936486:4,088,372...4,114,955 		JBrowse link
G Cast calpastatin acts_upstream_of_or_within ISO (PMID:11673859) MGI PMID:11673859 NCBI chrNW_004936523:6,688,153...6,798,184
Ensembl chrNW_004936523:6,686,519...6,798,321 		JBrowse link
G Cblb Cbl proto-oncogene B involved_in
acts_upstream_of		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chrNW_004936701:1,157,790...1,353,375
Ensembl chrNW_004936701:1,157,797...1,353,388 		JBrowse link
G Cblc Cbl proto-oncogene C acts_upstream_of_or_within ISO (PMID:18753381) MGI PMID:18753381 NCBI chrNW_004936706:1,436,732...1,450,485 JBrowse link
G Cd2ap CD2 associated protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14512504)
(PMID:18753381)		 Ensembl
MGI		 PMID:14512504 PMID:18753381 GO_REF:0000107 NCBI chrNW_004936476:12,890,595...12,989,046
Ensembl chrNW_004936476:12,890,468...12,987,843 		JBrowse link
G Chek2 checkpoint kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180 		JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8389815) Ensembl
MGI		 PMID:8389815 GO_REF:0000107 NCBI chrNW_004936615:993,092...999,976
Ensembl chrNW_004936615:985,634...1,003,172 		JBrowse link
G Cpb2 carboxypeptidase B2 ISO RGD PMID:11021404 RGD:625371 NCBI chrNW_004936857:577,067...609,855
Ensembl chrNW_004936857:577,585...626,267 		JBrowse link
G Cpn1 carboxypeptidase N subunit 1 ISO RGD PMID:11021404 RGD:625371 NCBI chrNW_004936636:145,148...172,865
Ensembl chrNW_004936636:145,024...172,876 		JBrowse link
G Ctsd cathepsin D ISO RGD PMID:12666874 RGD:1299317 NCBI chrNW_004936816:680,798...690,959
Ensembl chrNW_004936816:680,798...691,039 		JBrowse link
G Ctsl cathepsin L ISO RGD PMID:11788364 RGD:631244 NCBI chrNW_004936680:3,047,355...3,050,640 JBrowse link
G Cul2 cullin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15601820) Ensembl
MGI		 PMID:15601820 GO_REF:0000107 NCBI chrNW_004936574:3,310,304...3,408,389
Ensembl chrNW_004936574:3,309,941...3,408,370 		JBrowse link
G Cul3 cullin 3 involved_in IEA Ensembl
UniProt		 GO_REF:0000107 GO_REF:0000117 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:10,056,809...10,243,021
Ensembl chrNW_004936487:10,145,278...10,243,174 		JBrowse link
G Dennd3 DENN domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:10,217,404...10,264,911
Ensembl chrNW_004936470:10,217,394...10,264,956 		JBrowse link
G Dpp3 dipeptidyl peptidase 3 ISO RGD PMID:10387075 RGD:728455 NCBI chrNW_004936599:3,076,909...3,098,012
Ensembl chrNW_004936599:3,076,909...3,097,785 		JBrowse link
G Dpp4 dipeptidyl peptidase 4 ISO RGD PMID:17415460 RGD:1626457 NCBI chrNW_004936469:16,979,220...17,062,198
Ensembl chrNW_004936469:16,979,410...17,061,159 		JBrowse link
G Dpp7 dipeptidyl peptidase 7 ISO RGD PMID:11173530 RGD:70800 NCBI chrNW_004936669:868,889...872,982
Ensembl chrNW_004936669:869,067...872,885 		JBrowse link
G Dysf dysferlin acts_upstream_of ISO (PMID:20724702) MGI PMID:20724702 NCBI chrNW_004936491:15,412,606...15,618,519
Ensembl chrNW_004936491:15,413,206...15,618,519 		JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO (PMID:31628468) MGI PMID:31628468 NCBI chrNW_004936517:841,402...941,054
Ensembl chrNW_004936517:841,411...939,581 		JBrowse link
G Erap1 endoplasmic reticulum aminopeptidase 1 ISO RGD PMID:10824104 RGD:1299521 NCBI chrNW_004936523:6,661,119...6,686,988
Ensembl chrNW_004936523:6,661,315...6,690,425 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22556407) Ensembl
MGI		 PMID:22556407 GO_REF:0000107 NCBI chrNW_004936470:28,303,213...28,566,470
Ensembl chrNW_004936470:28,303,828...28,566,118 		JBrowse link
G Fbxl5 F-box and leucine rich repeat protein 5 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21907140) Ensembl
MGI		 PMID:21907140 GO_REF:0000107 NCBI chrNW_004936477:12,279,521...12,312,927
Ensembl chrNW_004936477:12,279,541...12,313,007 		JBrowse link
G Fbxo43 F-box protein 43 acts_upstream_of ISO (PMID:16966421) MGI PMID:16966421 NCBI chrNW_004936470:43,091,516...43,100,973
Ensembl chrNW_004936470:43,088,714...43,100,973 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16841086) Ensembl
MGI		 PMID:16841086 GO_REF:0000107 NCBI chrNW_004936679:388,500...588,518
Ensembl chrNW_004936679:387,387...443,880 		JBrowse link
G Gga1 golgi associated, gamma adaptin ear containing, ARF binding protein 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22836275) Ensembl
MGI		 PMID:22836275 GO_REF:0000107 NCBI chrNW_004936492:3,445,271...3,464,960
Ensembl chrNW_004936492:3,445,094...3,464,809 		JBrowse link
G Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:22836275) Ensembl
MGI		 PMID:22836275 GO_REF:0000107 NCBI chrNW_004936594:531,844...548,487
Ensembl chrNW_004936594:532,342...548,440 		JBrowse link
G Grin2a glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15317856) Ensembl
MGI		 PMID:15317856 GO_REF:0000107 NCBI chrNW_004936530:8,286,101...8,612,183
Ensembl chrNW_004936530:8,287,574...8,608,343 		JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in
acts_upstream_of		 IEA
ISO		 (PMID:21700773) Ensembl
MGI		 PMID:21700773 GO_REF:0000107 NCBI chrNW_004936570:1,009,344...1,010,654
Ensembl chrNW_004936570:1,009,312...1,010,686 		JBrowse link
G Htra2 HtrA serine peptidase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936556:741,718...746,016
Ensembl chrNW_004936556:741,718...749,090 		JBrowse link
G Ide insulin degrading enzyme involved_in ISO
IEA		 degradation of oxidized proteins in liver peroxisomes RGD
Ensembl		 PMID:11235899 GO_REF:0000107 RGD:1627575 NCBI chrNW_004936601:2,230,477...2,318,562
Ensembl chrNW_004936601:2,230,283...2,318,752 		JBrowse link
G Il17ra interleukin 17 receptor A involved_in ISO (PMID:28561022) MGI PMID:28561022 NCBI chrNW_004936807:143,165...165,820 JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:14973438) Ensembl
MGI		 PMID:14973438 GO_REF:0000107 NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767 		JBrowse link
G Klhl3 kelch like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:4,592,654...4,696,348
Ensembl chrNW_004936597:4,592,621...4,696,377 		JBrowse link
G Klk4 kallikrein related peptidase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22243248) Ensembl
MGI		 PMID:22243248 GO_REF:0000107 NCBI chrNW_004936889:583,259...586,412
Ensembl chrNW_004936889:583,302...586,412 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in ISO (PMID:36586411) UniProt PMID:36586411 NCBI chrNW_004936479:9,584,221...9,622,330
Ensembl chrNW_004936479:9,584,221...9,610,420 		JBrowse link
G Lnpep leucyl and cystinyl aminopeptidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11884418) Ensembl
MGI		 PMID:11884418 GO_REF:0000107 NCBI chrNW_004936523:6,443,571...6,533,122
Ensembl chrNW_004936523:6,445,939...6,532,566 		JBrowse link
G LOC101957150 stromelysin-1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936551:5,137,801...5,145,934
Ensembl chrNW_004936551:5,137,801...5,145,934 		JBrowse link
G Lonp1 lon peptidase 1, mitochondrial involved_in ISO
IEA		 RGD
Ensembl
InterPro		 PMID:12752449 GO_REF:0000002 GO_REF:0000107 RGD:1580665 NCBI chrNW_004936588:3,265,344...3,287,035
Ensembl chrNW_004936588:3,265,512...3,287,181 		JBrowse link
G Lonp2 lon peptidase 2, peroxisomal involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:1,480,723...1,584,757
Ensembl chrNW_004936475:1,480,670...1,584,445 		JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:20018880) Ensembl
MGI		 PMID:20018880 GO_REF:0000107 NCBI chrNW_004936815:281,664...345,915
Ensembl chrNW_004936815:292,200...344,413 		JBrowse link
G Lrsam1 leucine rich repeat and sterile alpha motif containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:15,181,009...15,217,952
Ensembl chrNW_004936487:15,180,811...15,217,406 		JBrowse link
G Mme membrane metalloendopeptidase ISO RGD PMID:15308303 PMID:15908023 RGD:1581744 RGD:1600807 NCBI chrNW_004936519:2,513,896...2,595,896
Ensembl chrNW_004936519:2,513,704...2,595,971 		JBrowse link
G Mmp13 matrix metallopeptidase 13 ISO RGD PMID:17941091 RGD:2296055 NCBI chrNW_004936551:5,040,084...5,050,384
Ensembl chrNW_004936551:5,040,084...5,050,384 		JBrowse link
G Mmp14 matrix metallopeptidase 14 involved_in ISO (PMID:35177851) UniProt PMID:35177851 NCBI chrNW_004936722:1,447,189...1,457,632
Ensembl chrNW_004936722:1,447,335...1,457,611 		JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO RGD PMID:16899336 RGD:1601417 NCBI chrNW_004936475:7,801,356...7,825,831
Ensembl chrNW_004936475:7,801,277...7,825,851 		JBrowse link
G Mmp20 matrix metallopeptidase 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22243248) Ensembl
MGI		 PMID:22243248 GO_REF:0000107 NCBI chrNW_004936551:5,310,426...5,352,883
Ensembl chrNW_004936551:5,310,426...5,352,883 		JBrowse link
G Mmp8 matrix metallopeptidase 8 ISO RGD PMID:16153442 RGD:2298554 NCBI chrNW_004936551:5,228,950...5,238,948
Ensembl chrNW_004936551:5,228,950...5,238,948 		JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO RGD PMID:11788364 PMID:16303975 RGD:1580555 RGD:631244 NCBI chrNW_004936514:7,038,240...7,045,873
Ensembl chrNW_004936514:7,037,639...7,045,793 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 acts_upstream_of ISO (PMID:17137798) MGI PMID:17137798 NCBI chrNW_004936504:12,053,470...12,103,346 JBrowse link
G Nln neurolysin ISO RGD PMID:7836437 RGD:9831155 NCBI chrNW_004936480:3,383,514...3,480,991
Ensembl chrNW_004936480:3,383,540...3,481,009 		JBrowse link
G Notch1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:1,292,016...1,334,061
Ensembl chrNW_004936669:1,292,088...1,332,428 		JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,771,384...19,785,034
Ensembl chrNW_004936475:19,769,488...19,785,311 		JBrowse link
G Nrg1 neuregulin 1 acts_upstream_of ISO (PMID:20448149) MGI PMID:20448149 NCBI chrNW_004936766:1,104,841...1,306,368
Ensembl chrNW_004936766:1,104,728...1,305,972 		JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11489964) Ensembl
MGI		 PMID:11489964 GO_REF:0000107 NCBI chrNW_004936558:3,106,819...3,149,689
Ensembl chrNW_004936558:3,108,283...3,149,765 		JBrowse link
G Pappa pappalysin 1 ISO RGD PMID:15754336 RGD:1642332 NCBI chrNW_004936487:5,000,279...5,379,786
Ensembl chrNW_004936487:5,144,044...5,376,367 		JBrowse link
G Pdlim2 PDZ and LIM domain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,318,813...6,331,556
Ensembl chrNW_004936555:6,318,762...6,331,575 		JBrowse link
G Pgpep1 pyroglutamyl-peptidase I ISO RGD PMID:14600395 RGD:1303965 NCBI chrNW_004936596:2,869,100...2,892,342
Ensembl chrNW_004936596:2,869,106...2,892,342 		JBrowse link
G Pja1 praja ring finger ubiquitin ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11959851) Ensembl
MGI		 PMID:11959851 GO_REF:0000107 NCBI chrNW_004936777:796,101...801,111
Ensembl chrNW_004936777:796,756...798,726 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16368712) Ensembl
MGI		 PMID:16368712 GO_REF:0000107 NCBI chrNW_004936474:21,881,692...21,906,564
Ensembl chrNW_004936474:21,881,712...21,906,569 		JBrowse link
G Prep prolyl endopeptidase ISO RGD PMID:11792464 PMID:17415460 RGD:1626457 RGD:633649 NCBI chrNW_004936564:1,944,245...2,062,178
Ensembl chrNW_004936564:1,944,245...2,062,262 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Proc protein C, inactivator of coagulation factors Va and VIIIa ISO RGD PMID:1440533 RGD:11100042 NCBI chrNW_004936469:43,841,989...43,850,322
Ensembl chrNW_004936469:43,841,989...43,850,304 		JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in ISO (MGI:5448516|PMID:21718402) UniProt PMID:21718402 MGI:5448516 NCBI chrNW_004936670:2,315,930...2,338,489
Ensembl chrNW_004936670:2,315,442...2,338,509 		JBrowse link
G Rbx1 ring-box 1 acts_upstream_of_or_within ISO (PMID:15601820) MGI PMID:15601820 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15923614) Ensembl
MGI		 PMID:15923614 GO_REF:0000107 NCBI chrNW_004936599:3,800,142...3,810,583
Ensembl chrNW_004936599:3,801,636...3,809,813 		JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936534:9,326,307...9,361,943
Ensembl chrNW_004936534:9,325,249...9,361,949 		JBrowse link
G Rnf5 ring finger protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,422,207...1,424,808
Ensembl chrNW_004936727:1,422,207...1,424,739 		JBrowse link
G Serpine2 serpin family E member 2 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:15509762) Ensembl
MGI		 PMID:15509762 GO_REF:0000107 NCBI chrNW_004936569:5,642,328...5,668,278
Ensembl chrNW_004936569:5,642,264...5,668,323 		JBrowse link
G Siah1 siah E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:1,589,997...1,621,506
Ensembl chrNW_004936475:1,590,004...1,594,894 		JBrowse link
G Slc16a3 solute carrier family 16 member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,715,234...5,721,343
Ensembl chrNW_004936594:5,716,935...5,721,343 		JBrowse link
G Slc6a17 solute carrier family 6 member 17 involved_in ISO PMID:19147495 SynGO PMID:19147495 RGD:8554196 NCBI chrNW_004936704:1,606,418...1,654,026
Ensembl chrNW_004936704:1,622,504...1,654,026 		JBrowse link
G Slc6a7 solute carrier family 6 member 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936504:4,709,539...4,730,583
Ensembl chrNW_004936504:4,709,583...4,730,219 		JBrowse link
G Slc6a8 solute carrier family 6 member 8 involved_in ISO PMID:20731764 SynGO PMID:20731764 RGD:13702397 NCBI chrNW_004936809:571,234...578,298 JBrowse link
G Spop speckle type BTB/POZ protein involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936490:11,894,449...11,969,730
Ensembl chrNW_004936490:11,894,406...11,970,155 		JBrowse link
G Spopl speckle type BTB/POZ protein like involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004936469:37,608,044...37,661,337
Ensembl chrNW_004936469:37,603,803...37,661,436 		JBrowse link
G Sqstm1 sequestosome 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936739:943,080...955,296
Ensembl chrNW_004936739:938,745...955,263 		JBrowse link
G St14 ST14 transmembrane serine protease matriptase ISO RGD PMID:11573963 RGD:634217 NCBI chrNW_004936572:2,137,820...2,182,674
Ensembl chrNW_004936572:2,137,332...2,182,742 		JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (MGI:5009360|PMID:20160352) ParkinsonsUK-UCL PMID:20160352 MGI:5009360 NCBI chrNW_004936599:4,235,779...4,243,395
Ensembl chrNW_004936599:4,236,188...4,243,394 		JBrowse link
G Tpp1 tripeptidyl peptidase 1 ISO RGD PMID:10679303 RGD:1581099 NCBI chrNW_004936842:669,869...676,706
Ensembl chrNW_004936842:669,863...676,720 		JBrowse link
G Tpp2 tripeptidyl peptidase 2 ISO RGD PMID:12147224 RGD:634435 NCBI chrNW_004936472:8,370,607...8,438,376
Ensembl chrNW_004936472:8,369,736...8,438,412 		JBrowse link
G Traf2 TNF receptor associated factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12958312) Ensembl
MGI		 PMID:12958312 GO_REF:0000107 NCBI chrNW_004936669:1,004,891...1,034,913
Ensembl chrNW_004936669:1,003,528...1,029,249 		JBrowse link
G Trim24 tripartite motif containing 24 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:2,902,805...2,962,602
Ensembl chrNW_004936592:2,863,743...2,963,977 		JBrowse link
G Ube4b ubiquitination factor E4B acts_upstream_of_or_within ISO (PMID:16314518) MGI PMID:16314518 NCBI chrNW_004936623:3,934,439...4,051,083
Ensembl chrNW_004936623:3,934,310...4,051,146 		JBrowse link
G Uchl3 ubiquitin C-terminal hydrolase L3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:5,524,425...5,581,156
Ensembl chrNW_004936511:5,522,965...5,581,334 		JBrowse link
G Utp25 UTP25 small subunit processome component involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:3,244,274...3,268,853
Ensembl chrNW_004936557:3,223,470...3,268,888 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12832481) Ensembl
MGI		 PMID:12832481 GO_REF:0000107 NCBI chrNW_004936602:3,135,790...3,140,622 JBrowse link
protein catabolic process at postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:19,760,709...19,911,759
Ensembl chrNW_004936471:19,758,118...19,911,759 		JBrowse link
G Capn2 calpain 2 involved_in ISO (PMID:20089917) SynGO PMID:20089917 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682 		JBrowse link
G Psen1 presenilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:2,464,623...2,528,807
Ensembl chrNW_004936488:2,464,527...2,530,065 		JBrowse link
G Psen2 presenilin 2 involved_in ISO (PMID:23083742) SynGO PMID:23083742 NCBI chrNW_004936526:3,584,194...3,611,719
Ensembl chrNW_004936526:3,584,188...3,614,074 		JBrowse link
protein catabolic process at presynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Septin3 septin 3 involved_in ISO (PMID:35932293) SynGO PMID:35932293 NCBI chrNW_004936492:31,182...55,866 JBrowse link
protein catabolic process in the vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gid4 GID complex subunit 4 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936741:1,618,522...1,635,776
Ensembl chrNW_004936741:1,620,359...1,635,799 		JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23704209) Ensembl
MGI		 PMID:23704209 GO_REF:0000107 NCBI chrNW_004936599:2,070,211...2,079,169
Ensembl chrNW_004936599:2,066,847...2,079,206 		JBrowse link
protein catabolic process, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf216 ring finger protein 216 involved_in ISO PMID:24945773 SynGO PMID:24945773 RGD:11553202 NCBI chrNW_004936765:452,755...592,358
Ensembl chrNW_004936765:473,025...589,681 		JBrowse link
protein quality control for misfolded or incompletely synthesized proteins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936564:4,553,758...4,755,126
Ensembl chrNW_004936564:4,553,732...4,757,616 		JBrowse link
G Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 involved_in ISO (PMID:29632312), (PMID:30244831), (PMID:31011209), (PMID:32075755) UniProt PMID:29632312 PMID:30244831 PMID:31011209 PMID:32075755 NCBI chrNW_004936569:1,645,780...1,653,526
Ensembl chrNW_004936569:1,650,088...1,653,522 		JBrowse link
G Atxn3 ataxin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936733:306,400...347,161
Ensembl chrNW_004936733:310,836...347,112 		JBrowse link
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:3,723,188...3,728,037
Ensembl chrNW_004936588:3,722,941...3,731,439 		JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 involved_in ISO (PMID:30190310) UniProt PMID:30190310 NCBI chrNW_004936531:2,674,319...3,179,325 JBrowse link
G Hdac6 histone deacetylase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936721:757,500...778,416
Ensembl chrNW_004936721:758,181...778,053 		JBrowse link
G Lonp1 lon peptidase 1, mitochondrial involved_in IEA UniProt
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936588:3,265,344...3,287,035
Ensembl chrNW_004936588:3,265,512...3,287,181 		JBrowse link
G Lonp2 lon peptidase 2, peroxisomal involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936475:1,480,723...1,584,757
Ensembl chrNW_004936475:1,480,670...1,584,445 		JBrowse link
G Ngly1 N-glycanase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936473:17,243,763...17,294,609
Ensembl chrNW_004936473:17,239,966...17,294,791 		JBrowse link
G Oma1 OMA1 zinc metallopeptidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936522:3,232,877...3,294,832
Ensembl chrNW_004936522:3,233,510...3,294,798 		JBrowse link
G Saysd1 SAYSVFN motif domain containing 1 involved_in ISO (PMID:36848233) UniProt PMID:36848233 NCBI chrNW_004936476:20,513,238...20,520,825
Ensembl chrNW_004936476:20,513,097...20,521,761 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:328,767...330,963
Ensembl chrNW_004936501:326,451...330,983 		JBrowse link
G Ube2w ubiquitin conjugating enzyme E2 W involved_in ISO (MGI:5318000|PMID:21855799) UniProt PMID:21855799 MGI:5318000 NCBI chrNW_004936648:2,517,951...2,575,805
Ensembl chrNW_004936648:2,521,432...2,575,815 		JBrowse link
G Yme1l1 YME1 like 1 ATPase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936484:2,306,937...2,352,671
Ensembl chrNW_004936484:2,306,760...2,353,507 		JBrowse link
G Zer1 zyg-11 related cell cycle regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:16,210,738...16,239,686
Ensembl chrNW_004936487:16,210,707...16,239,660 		JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:8,197,557...8,266,061
Ensembl chrNW_004936522:8,198,098...8,266,109 		JBrowse link
protein targeting to lysosome involved in chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clu clusterin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:499,745...513,515
Ensembl chrNW_004936675:499,199...513,836 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936542:7,577,192...7,581,598
Ensembl chrNW_004936542:7,577,149...7,581,923 		JBrowse link
G Lamp2 lysosomal associated membrane protein 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:18644871 MGI
TreeGrafter
Ensembl		 PMID:18644871 GO_REF:0000107 GO_REF:0000118 RGD:10412301 NCBI chrNW_004936479:9,584,221...9,622,330
Ensembl chrNW_004936479:9,584,221...9,610,420 		JBrowse link
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101974834 vacuolar protein-sorting-associated protein 36-like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936506:3,026,351...3,028,114 JBrowse link
G Ptpn23 protein tyrosine phosphatase non-receptor type 23 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936596:1,094,285...1,124,483
Ensembl chrNW_004936596:1,094,205...1,124,712 		JBrowse link
G Sh3d19 SH3 domain containing 19 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936689:1,147,350...1,241,202
Ensembl chrNW_004936689:1,147,353...1,239,064 		JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:12,507,147...12,520,424
Ensembl chrNW_004936490:12,507,116...12,523,674 		JBrowse link
G Spryd3 SPRY domain containing 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936512:10,382,651...10,406,326
Ensembl chrNW_004936512:10,390,626...10,406,555 		JBrowse link
G Stam signal transducing adaptor molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936520:9,627,674...9,689,658
Ensembl chrNW_004936520:9,624,628...9,689,686 		JBrowse link
G Vps25 vacuolar protein sorting 25 homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:17,486,009...17,491,692
Ensembl chrNW_004936490:17,486,003...17,491,689 		JBrowse link
G Vps28 VPS28 subunit of ESCRT-I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:7,829,207...7,833,213
Ensembl chrNW_004936470:7,830,114...7,833,047 		JBrowse link
G Vps36 vacuolar protein sorting 36 homolog involved_in IEA UniProt
TreeGrafter		 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936565:4,898,969...4,921,411 JBrowse link
proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:7,180,262...7,483,416
Ensembl chrNW_004936518:7,180,428...7,480,802 		JBrowse link
G Btk Bruton tyrosine kinase ISO RGD PMID:32083858 RGD:151665122 NCBI chrNW_004936813:429,400...467,481
Ensembl chrNW_004936813:429,224...463,441 		JBrowse link
proteolysis involved in protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936518:7,180,262...7,483,416
Ensembl chrNW_004936518:7,180,428...7,480,802 		JBrowse link
G Capn2 calpain 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936526:879,765...932,682
Ensembl chrNW_004936526:879,765...932,682 		JBrowse link
G Casp8 caspase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936726:554,627...596,334
Ensembl chrNW_004936726:554,758...595,922 		JBrowse link
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,723,188...3,728,037
Ensembl chrNW_004936588:3,722,941...3,731,439 		JBrowse link
G Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit X involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:25,447,750...25,484,956
Ensembl chrNW_004936471:25,444,711...25,484,988 		JBrowse link
G Cpa1 carboxypeptidase A1 ISO RGD PMID:15865404 RGD:1578424 NCBI chrNW_004936579:4,897,225...4,903,409
Ensembl chrNW_004936579:4,897,225...4,903,409 		JBrowse link
G Ctsf cathepsin F involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936599:3,026,837...3,033,735
Ensembl chrNW_004936599:3,029,327...3,033,272 		JBrowse link
G Ctsh cathepsin H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:37,135,200...37,156,081
Ensembl chrNW_004936471:37,131,817...37,156,476 		JBrowse link
G Ctsk cathepsin K involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:1,022,762...1,038,020
Ensembl chrNW_004936580:1,022,762...1,034,984 		JBrowse link
G Ctsl cathepsin L involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936680:3,047,355...3,050,640 JBrowse link
G Ctso cathepsin O involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936576:2,558,625...2,581,329
Ensembl chrNW_004936576:2,561,893...2,573,192 		JBrowse link
G Ctss cathepsin S involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936580:963,176...991,732
Ensembl chrNW_004936580:963,153...991,442 		JBrowse link
G Ctsw cathepsin W involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936599:3,657,255...3,661,007
Ensembl chrNW_004936599:3,657,453...3,660,922 		JBrowse link
G Ctsz cathepsin Z involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936530:1,482,007...1,490,685
Ensembl chrNW_004936530:1,482,012...1,490,736 		JBrowse link
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:14,055,548...14,126,173
Ensembl chrNW_004936472:14,055,532...14,126,211 		JBrowse link
G Fap fibroblast activation protein alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:16,817,000...16,889,066
Ensembl chrNW_004936469:16,817,232...16,888,773 		JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23541922) Ensembl
MGI		 PMID:23541922 GO_REF:0000107 NCBI chrNW_004936588:2,000,872...2,007,569
Ensembl chrNW_004936588:1,993,721...2,009,240 		JBrowse link
G Gzma granzyme A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936480:12,641,587...12,649,243
Ensembl chrNW_004936480:12,641,433...12,649,324 		JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717 		JBrowse link
G Ide insulin degrading enzyme involved_in ISO
IEA		 degradation of insulin, beta-endorphin and amyloid-beta peptide RGD
TreeGrafter
Ensembl		 PMID:15749695 GO_REF:0000107 GO_REF:0000118 RGD:1626704 NCBI chrNW_004936601:2,230,477...2,318,562
Ensembl chrNW_004936601:2,230,283...2,318,752 		JBrowse link
G Lgmn legumain involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936733:772,764...792,792
Ensembl chrNW_004936733:772,708...792,995 		JBrowse link
G LOC101968945 procathepsin L-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936626:3,495,364...3,498,546 JBrowse link
G LOC101969737 procathepsin L involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:690,826...696,099
Ensembl chrNW_004936487:688,893...696,180 		JBrowse link
G LOC101974062 proteasome subunit beta type-6-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936487:16,433,848...16,435,713 JBrowse link
G Lonp1 lon peptidase 1, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:3,265,344...3,287,035
Ensembl chrNW_004936588:3,265,512...3,287,181 		JBrowse link
G Malt1 MALT1 paracaspase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:5,854,361...5,910,719
Ensembl chrNW_004936497:5,853,870...5,904,266 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:25417702) CAFA PMID:25417702 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Nrdc nardilysin convertase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936522:9,041,204...9,129,674
Ensembl chrNW_004936522:9,041,111...9,129,327 		JBrowse link
G Plg plasminogen ISO RGD PMID:7864083 PMID:12928439 RGD:1299253 RGD:2301095 NCBI chrNW_004936489:11,775,243...11,808,482
Ensembl chrNW_004936489:11,775,243...11,805,651 		JBrowse link
G Pm20d1 peptidase M20 domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936557:6,610,862...6,631,220
Ensembl chrNW_004936557:6,610,834...6,631,331 		JBrowse link
G Psma6 proteasome 20S subunit alpha 6 involved_in ISO (PMID:16845397) BHF-UCL PMID:16845397 NCBI chrNW_004936494:9,443,176...9,467,697 JBrowse link
G Psma7 proteasome 20S subunit alpha 7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936514:9,808,966...9,819,548
Ensembl chrNW_004936514:9,806,624...9,813,723 		JBrowse link
G Psmb1 proteasome 20S subunit beta 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004937098:67,298...80,019
Ensembl chrNW_004937098:66,832...81,708 		JBrowse link
G Psmb10 proteasome 20S subunit beta 10 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:18,290,055...18,293,035
Ensembl chrNW_004936475:18,290,077...18,292,544 		JBrowse link
G Psmb11 proteasome subunit beta 11 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936722:1,279,867...1,281,232
Ensembl chrNW_004936722:1,280,042...1,280,923 		JBrowse link
G Psmb4 proteasome 20S subunit beta 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936580:1,610,635...1,613,357
Ensembl chrNW_004936580:1,609,775...1,618,175 		JBrowse link
G Psmb5 proteasome 20S subunit beta 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936722:1,285,488...1,293,637
Ensembl chrNW_004936722:1,285,482...1,295,106 		JBrowse link
G Psmb6 proteasome 20S subunit beta 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936677:2,893,780...2,895,870
Ensembl chrNW_004936677:2,893,737...2,896,380 		JBrowse link
G Psmb7 proteasome 20S subunit beta 7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936487:12,634,561...12,689,914
Ensembl chrNW_004936487:12,631,612...12,689,936 		JBrowse link
G Psmb8 proteasome 20S subunit beta 8 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:25,908,533...25,911,914
Ensembl chrNW_004936476:25,908,490...25,911,925 		JBrowse link
G Psmb9 proteasome 20S subunit beta 9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:25,894,313...25,899,132
Ensembl chrNW_004936476:25,894,027...25,899,319 		JBrowse link
G Rnf123 ring finger protein 123 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936529:1,306,849...1,336,032
Ensembl chrNW_004936529:1,306,968...1,336,032 		JBrowse link
G Rspry1 ring finger and SPRY domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:9,294,421...9,338,372
Ensembl chrNW_004936475:9,294,340...9,340,268 		JBrowse link
purine nucleobase catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
G LOC101966455 uricase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
purine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix hydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936823:7,104...22,083
Ensembl chrNW_004936823:7,099...18,677 		JBrowse link
purine nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt15 nudix hydrolase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936565:1,380,981...1,389,908
Ensembl chrNW_004936565:1,381,655...1,389,048 		JBrowse link
purine ribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:14,188,328...14,204,063
Ensembl chrNW_004936476:14,191,479...14,195,618 		JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hint1 histidine triad nucleotide binding protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936647:3,843,544...3,849,428 JBrowse link
G LOC101962268 histidine triad nucleotide-binding protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:7,012,531...7,079,142 JBrowse link
G LOC101977773 histidine triad nucleotide-binding protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:5,917,787...5,918,222 JBrowse link
putrescine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936486:19,503,631...19,511,918
Ensembl chrNW_004936486:19,503,631...19,511,920 		JBrowse link
G Sat1 spermidine/spermine N1-acetyltransferase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chrNW_004936624:756,761...759,979
Ensembl chrNW_004936624:756,712...759,983 		JBrowse link
pyridoxal phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdxp pyridoxal phosphatase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:3,420,590...3,426,764
Ensembl chrNW_004936492:3,421,516...3,426,715 		JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:430,274...432,027
Ensembl chrNW_004936594:430,506...432,095 		JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936741:950,681...999,290
Ensembl chrNW_004936741:965,273...999,247 		JBrowse link
pyrimidine nucleobase catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12651209) RGD
MGI
Ensembl		 PMID:1629785 PMID:12651209 GO_REF:0000107 RGD:1599794 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936470:39,564,431...39,637,394
Ensembl chrNW_004936470:39,564,335...39,637,544 		JBrowse link
pyrimidine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:668,380...713,720
Ensembl chrNW_004936619:668,351...696,306 		JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qprt quinolinate phosphoribosyltransferase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9473669) MGI
TreeGrafter
Ensembl		 PMID:9473669 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:12,743,634...12,763,068
Ensembl chrNW_004936501:12,742,157...12,763,187 		JBrowse link
regulation of chaperone-mediated autophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfap glial fibrillary acidic protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936541:1,265,915...1,275,232
Ensembl chrNW_004936541:1,265,436...1,275,296 		JBrowse link
regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,091,115...9,102,101
Ensembl chrNW_004936475:9,091,176...9,102,109 		JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:814,649...826,008
Ensembl chrNW_004936529:813,951...826,014 		JBrowse link
regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl2 ADP ribosylation factor like GTPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,336,190...4,343,007
Ensembl chrNW_004936599:4,336,079...4,343,061 		JBrowse link
G Eif6 eukaryotic translation initiation factor 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,471,113...5,477,679
Ensembl chrNW_004936561:5,471,102...5,477,813 		JBrowse link
G Ep300 E1A binding protein p300 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:696,982...778,132
Ensembl chrNW_004936492:696,960...778,138 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17437992) Ensembl
MGI		 PMID:17437992 GO_REF:0000107 NCBI chrNW_004936495:5,770,988...5,816,157
Ensembl chrNW_004936495:5,770,669...5,816,157 		JBrowse link
G Il3 interleukin 3 acts_upstream_of_or_within ISO (PMID:17437992) MGI PMID:17437992 NCBI chrNW_004936647:3,102,922...3,104,758 JBrowse link
G Jmjd8 jumonji domain containing 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:327,053...328,789
Ensembl chrNW_004936501:327,150...328,720 		JBrowse link
G Mlxipl MLX interacting protein like ISO RGD PMID:11724780 RGD:634534 NCBI chrNW_004936543:2,839,105...2,856,997
Ensembl chrNW_004936543:2,839,105...2,857,002 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936762:99,335...137,833
Ensembl chrNW_004936762:99,293...137,874 		JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:2,240,452...2,248,689
Ensembl chrNW_004936636:2,236,508...2,248,768 		JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:6,907,723...7,168,222
Ensembl chrNW_004936527:6,909,044...7,167,600 		JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 acts_upstream_of_or_within ISO (PMID:15857891) MGI PMID:15857891 NCBI chrNW_004936569:1,258,678...1,266,925
Ensembl chrNW_004936569:1,259,105...1,266,925 		JBrowse link
G Slc2a6 solute carrier family 2 member 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:3,432,206...3,438,849
Ensembl chrNW_004936669:3,432,188...3,442,531 		JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28069950) Ensembl
MGI		 PMID:28069950 GO_REF:0000107 NCBI chrNW_004936529:264,535...266,451
Ensembl chrNW_004936529:264,468...266,422 		JBrowse link
G Zbtb7a zinc finger and BTB domain containing 7A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,310,975...2,321,790
Ensembl chrNW_004936588:2,311,727...2,321,372 		JBrowse link
regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylip myosin regulatory light chain interacting protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936552:2,325,161...2,341,356
Ensembl chrNW_004936552:2,325,378...2,339,867 		JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15805190)
(PMID:15741654)		 Ensembl
MGI		 PMID:15741654 PMID:15805190 GO_REF:0000107 NCBI chrNW_004936522:6,271,339...6,300,202
Ensembl chrNW_004936522:6,272,507...6,299,917 		JBrowse link
regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:3,968,216...3,980,821
Ensembl chrNW_004936474:3,968,506...3,980,815 		JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:29514215) Ensembl
MGI		 PMID:29514215 GO_REF:0000107 NCBI chrNW_004936642:2,745,889...2,833,286
Ensembl chrNW_004936642:2,801,908...2,832,830 		JBrowse link
regulation of membrane protein ectodomain proteolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tspan15 tetraspanin 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936521:8,981,691...9,022,336
Ensembl chrNW_004936521:8,979,541...9,022,387 		JBrowse link
G Tspan17 tetraspanin 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:901,729...913,847
Ensembl chrNW_004936597:901,723...911,704 		JBrowse link
G Tspan5 tetraspanin 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936717:49,797...217,567
Ensembl chrNW_004936717:49,752...217,654 		JBrowse link
regulation of phosphatidylcholine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,259,405...1,300,545
Ensembl chrNW_004936659:1,259,369...1,302,294 		JBrowse link
G Scarb1 scavenger receptor class B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892 		JBrowse link
regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (PMID:28111074) UniProt PMID:28111074 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19103752) Ensembl
MGI		 PMID:19103752 GO_REF:0000107 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987 		JBrowse link
G Dlgap1 DLG associated protein 1 involved_in ISO PMID:15496675 BHF-UCL PMID:15496675 RGD:8553458 NCBI chrNW_004936672:610,020...1,094,718
Ensembl chrNW_004936672:731,858...1,091,462 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:16,911,575...16,960,521
Ensembl chrNW_004936471:16,912,155...16,960,468 		JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:27107699) Ensembl
MGI		 PMID:27107699 GO_REF:0000107 NCBI chrNW_004936625:761,013...819,826
Ensembl chrNW_004936625:738,124...821,566 		JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:997,943...999,123
Ensembl chrNW_004936529:998,150...998,987 		JBrowse link
G Nfe2l1 NFE2 like bZIP transcription factor 1 acts_upstream_of_or_within ISO (PMID:27920251)
(PMID:29400713)		 MGI PMID:27920251 PMID:29400713 NCBI chrNW_004936490:13,265,269...13,279,164
Ensembl chrNW_004936490:13,266,347...13,279,206 		JBrowse link
G Nudt15 nudix hydrolase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936565:1,380,981...1,389,908
Ensembl chrNW_004936565:1,381,655...1,389,048 		JBrowse link
G Pithd1 PITH domain containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31915251) Ensembl
MGI		 PMID:31915251 GO_REF:0000107 NCBI chrNW_004936474:8,933,598...8,943,066
Ensembl chrNW_004936474:8,933,557...8,943,189 		JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23001567) MGI
Ensembl		 PMID:23001567 GO_REF:0000107 NCBI chrNW_004936694:1,923,383...1,958,160
Ensembl chrNW_004936694:1,930,621...1,957,179 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:2,750,015...2,765,914
Ensembl chrNW_004936659:2,750,537...2,765,753 		JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,353,905...1,464,636
Ensembl chrNW_004936608:1,353,897...1,464,636 		JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936469:17,494,137...17,601,045
Ensembl chrNW_004936469:17,494,134...17,601,045 		JBrowse link
G Psme1 proteasome activator subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:405,491...408,277
Ensembl chrNW_004936722:403,112...408,473 		JBrowse link
G Psme2 proteasome activator subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936722:398,406...401,987
Ensembl chrNW_004936722:397,876...402,167 		JBrowse link
G Psme3 proteasome activator subunit 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:17,542,933...17,549,347
Ensembl chrNW_004936490:17,542,726...17,551,049 		JBrowse link
G Rhbdf1 rhomboid 5 homolog 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:802,728...810,375
Ensembl chrNW_004936501:803,005...813,367 		JBrowse link
G Tmf1 TATA element modulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936603:1,577,519...1,602,022
Ensembl chrNW_004936603:1,577,486...1,602,250 		JBrowse link
G Ubb ubiquitin B acts_upstream_of_or_within ISO (PMID:17571083) MGI PMID:17571083 NCBI chrNW_004936821:241,981...243,304 JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936638:1,242,950...1,289,376
Ensembl chrNW_004936638:1,242,893...1,290,512 		JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936550:640,331...675,703
Ensembl chrNW_004936550:635,963...675,832 		JBrowse link
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Araf A-Raf proto-oncogene, serine/threonine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936502:13,323,365...13,335,003
Ensembl chrNW_004936502:13,323,355...13,335,224 		JBrowse link
G Commd1 copper metabolism domain containing 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936491:7,247,160...7,421,039
Ensembl chrNW_004936491:7,247,140...7,420,921 		JBrowse link
G Dda1 DET1 and DDB1 associated 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936596:3,545,669...3,554,134
Ensembl chrNW_004936596:3,545,669...3,554,134 		JBrowse link
G Desi1 desumoylating isopeptidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:326,029...348,219
Ensembl chrNW_004936492:326,032...346,102 		JBrowse link
G Foxf2 forkhead box F2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936633:2,538,209...2,543,649
Ensembl chrNW_004936633:2,536,970...2,543,765 		JBrowse link
G Glmn glomulin, FKBP associated protein acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:22405651) MGI
Ensembl		 PMID:22405651 GO_REF:0000107 NCBI chrNW_004936537:6,778,317...6,827,384
Ensembl chrNW_004936537:6,777,965...6,829,881 		JBrowse link
G Gna12 G protein subunit alpha 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936823:447,979...543,134
Ensembl chrNW_004936823:447,917...543,140 		JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:2,001,356...2,007,520
Ensembl chrNW_004936659:2,001,301...2,010,215 		JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936559:5,224,679...5,264,853
Ensembl chrNW_004936559:5,226,223...5,264,491 		JBrowse link
G Ube2k ubiquitin conjugating enzyme E2 K involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18710920) Ensembl
MGI		 PMID:18710920 GO_REF:0000107 NCBI chrNW_004936482:7,244,972...7,323,263
Ensembl chrNW_004936482:7,244,967...7,323,266 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:5,299,864...5,316,583
Ensembl chrNW_004936580:5,301,389...5,315,756 		JBrowse link
G Ufl1 UFM1 specific ligase 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:20228063) MGI
TreeGrafter
Ensembl		 PMID:20228063 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936699:1,131,385...1,163,310
Ensembl chrNW_004936699:1,129,344...1,163,530 		JBrowse link
G Wnt10b Wnt family member 10B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19056892) Ensembl
MGI		 PMID:19056892 GO_REF:0000107 NCBI chrNW_004936512:6,768,240...6,774,172
Ensembl chrNW_004936512:6,768,240...6,774,172 		JBrowse link
G Xpo1 exportin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:6,921,753...6,962,062
Ensembl chrNW_004936491:6,921,319...6,962,343 		JBrowse link
regulation of protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmal1 basic helix-loop-helix ARNT like 1 acts_upstream_of_or_within ISO (PMID:12897057) MGI PMID:12897057 NCBI chrNW_004936528:5,167,611...5,239,128
Ensembl chrNW_004936528:5,164,481...5,239,128 		JBrowse link
G Cenatac centrosomal AT-AC splicing factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:3,965,259...3,974,736
Ensembl chrNW_004936542:3,965,256...3,974,739 		JBrowse link
G Chek2 checkpoint kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:2,805,947...2,848,180
Ensembl chrNW_004936657:2,805,959...2,848,180 		JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:4,769,409...4,775,186
Ensembl chrNW_004936594:4,769,466...4,774,293 		JBrowse link
G Faf1 Fas associated factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:9,774,943...10,160,987
Ensembl chrNW_004936522:9,784,203...10,161,774 		JBrowse link
G Fam83d family with sequence similarity 83 member D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:2,528,463...2,549,665
Ensembl chrNW_004936561:2,528,404...2,549,711 		JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:16,136,099...16,147,945
Ensembl chrNW_004936483:16,136,099...16,144,635 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:9153395) UniProt PMID:9153395 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Odc1 ornithine decarboxylase 1 involved_in ISO (MGI:5574513|PMID:24967154) UniProt PMID:24967154 MGI:5574513 NCBI chrNW_004936532:6,581,717...6,587,116 JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha acts_upstream_of_or_within ISO PMID:19029245 MGI PMID:19029245 RGD:8553977 NCBI chrNW_004936647:1,031,118...1,055,961
Ensembl chrNW_004936647:1,031,119...1,055,149 		JBrowse link
G Psmd1 proteasome 26S subunit, non-ATPase 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936525:5,672,013...5,762,035
Ensembl chrNW_004936525:5,668,186...5,762,364 		JBrowse link
G Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936578:5,570,969...5,580,334
Ensembl chrNW_004936578:5,570,817...5,580,617 		JBrowse link
G Psmd3 proteasome 26S subunit, non-ATPase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936490:15,118,024...15,135,241
Ensembl chrNW_004936490:15,117,801...15,137,835 		JBrowse link
G Samd9l sterile alpha motif domain containing 9 like acts_upstream_of_or_within ISO (PMID:24029230) MGI PMID:24029230 NCBI chrNW_004936803:731,878...754,540
Ensembl chrNW_004936803:749,740...754,473 		JBrowse link
G Serpinb1 serpin family B member 1 acts_upstream_of_or_within ISO (PMID:12189154) MGI PMID:12189154 NCBI chrNW_004936633:3,917,430...3,926,046
Ensembl chrNW_004936633:3,916,572...3,926,176 		JBrowse link
G Snf8 SNF8 subunit of ESCRT-II involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:12,507,147...12,520,424
Ensembl chrNW_004936490:12,507,116...12,523,674 		JBrowse link
G Tmem9 transmembrane protein 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936567:3,232,628...3,250,596
Ensembl chrNW_004936567:3,225,511...3,250,684 		JBrowse link
G Ubxn2a UBX domain protein 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19474315) Ensembl
MGI		 PMID:19474315 GO_REF:0000107 NCBI chrNW_004936493:7,969,271...7,978,537
Ensembl chrNW_004936493:7,971,960...7,985,314 		JBrowse link
G Wdr91 WD repeat domain 91 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:734,151...763,672
Ensembl chrNW_004936579:734,109...766,748 		JBrowse link
G Xpo1 exportin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15767664) Ensembl
MGI		 PMID:15767664 GO_REF:0000107 NCBI chrNW_004936491:6,921,753...6,962,062
Ensembl chrNW_004936491:6,921,319...6,962,343 		JBrowse link
G Zdhhc2 zinc finger DHHC-type palmitoyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936573:6,216,084...6,280,142
Ensembl chrNW_004936573:6,216,078...6,282,052 		JBrowse link
regulation of protein catabolic process at postsynapse, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 involved_in ISO PMID:21186356 SynGO PMID:21186356 RGD:13702406 NCBI chrNW_004936475:18,990,529...19,065,954
Ensembl chrNW_004936475:18,990,474...19,067,203 		JBrowse link
G Fbxo2 F-box protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:521,235...526,151
Ensembl chrNW_004936474:521,123...526,959 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in ISO PMID:21148011 SynGO PMID:21148011 RGD:13702142 NCBI chrNW_004936471:17,254,777...17,374,725
Ensembl chrNW_004936471:17,252,234...17,374,804 		JBrowse link
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:42,965,790...43,007,487
Ensembl chrNW_004936470:42,965,284...43,007,487 		JBrowse link
G Usp8 ubiquitin specific peptidase 8 involved_in ISO PMID:25505317 SynGO PMID:25505317 RGD:11076799 NCBI chrNW_004936471:12,463,189...12,524,148
Ensembl chrNW_004936471:12,463,120...12,520,674 		JBrowse link
regulation of protein catabolic process at presynapse, modulating synaptic transmission term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxl20 F-box and leucine rich repeat protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:14,521,037...14,623,741
Ensembl chrNW_004936490:14,521,037...14,623,108 		JBrowse link
regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936790:1,210,842...1,298,577
Ensembl chrNW_004936790:1,212,536...1,298,566 		JBrowse link
G Lats1 large tumor suppressor kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936489:2,607,114...2,649,879
Ensembl chrNW_004936489:2,605,195...2,649,879 		JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936527:6,726,363...6,756,445
Ensembl chrNW_004936527:6,726,357...6,755,318 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936675:216,970...325,670
Ensembl chrNW_004936675:275,288...324,810 		JBrowse link
G Tmem168 transmembrane protein 168 acts_upstream_of_or_within ISO (PMID:32175648) MGI PMID:32175648 NCBI chrNW_004936589:5,671,182...5,699,714 JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:41,187,665...41,290,345
Ensembl chrNW_004936471:41,187,612...41,283,517 		JBrowse link
retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg2a AFG2 AAA ATPase homolog A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936662:1,957,364...2,207,410
Ensembl chrNW_004936662:1,886,176...1,929,097
Ensembl chrNW_004936662:1,886,176...1,929,097 		JBrowse link
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936556:738,946...742,049
Ensembl chrNW_004936556:739,094...742,034 		JBrowse link
G Derl1 derlin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15215855) MGI
Ensembl		 PMID:15215855 GO_REF:0000107 NCBI chrNW_004936470:24,262,401...24,286,713
Ensembl chrNW_004936470:24,262,091...24,286,577 		JBrowse link
G Derl2 derlin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21220515) Ensembl
MGI		 PMID:21220515 GO_REF:0000107 NCBI chrNW_004936677:2,328,783...2,342,068
Ensembl chrNW_004936677:2,328,904...2,342,080 		JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936491:351,813...377,978
Ensembl chrNW_004936491:351,420...378,441 		JBrowse link
G Faf2 Fas associated factor family member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:710,168...772,455
Ensembl chrNW_004936597:710,100...772,765 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:9,091,115...9,102,101
Ensembl chrNW_004936475:9,091,176...9,102,109 		JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:10,513,908...10,528,281
Ensembl chrNW_004936492:10,513,908...10,528,285 		JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:5,206,222...5,251,042
Ensembl chrNW_004936594:5,205,659...5,251,026 		JBrowse link
G Os9 OS9 endoplasmic reticulum lectin involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936646:1,832,434...1,860,200
Ensembl chrNW_004936646:1,832,015...1,859,576 		JBrowse link
G Sec61b SEC61 translocon subunit beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:7,731,033...7,739,410
Ensembl chrNW_004936524:7,731,058...7,740,310 		JBrowse link
G Sel1l SEL1L adaptor subunit of SYVN1 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:9,838,092...9,903,780
Ensembl chrNW_004936488:9,838,092...9,903,839 		JBrowse link
G Selenos selenoprotein S involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936483:2,589,773...2,600,837
Ensembl chrNW_004936483:2,589,828...2,599,987 		JBrowse link
G Syvn1 synoviolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,235,779...4,243,395
Ensembl chrNW_004936599:4,236,188...4,243,394 		JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:21,665,955...21,670,667
Ensembl chrNW_004936477:21,665,275...21,670,668 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:3,395,130...3,419,704
Ensembl chrNW_004936619:3,395,687...3,419,472 		JBrowse link
G Vcp valosin containing protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
ribosome-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ascc2 activating signal cointegrator 1 complex subunit 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936657:3,709,578...3,752,377
Ensembl chrNW_004936657:3,707,721...3,752,499 		JBrowse link
G Ascc3 activating signal cointegrator 1 complex subunit 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936651:1,952,594...2,291,143
Ensembl chrNW_004936651:1,953,240...2,275,756 		JBrowse link
G Ltn1 listerin E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
TreeGrafter
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936500:13,014,102...13,061,695
Ensembl chrNW_004936500:13,014,102...13,061,699 		JBrowse link
G Nemf nuclear export mediator factor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936583:209,818...255,439
Ensembl chrNW_004936583:209,813...255,131 		JBrowse link
G Rnf10 ring finger protein 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936668:389,961...427,213
Ensembl chrNW_004936668:389,343...427,258 		JBrowse link
G Tcf25 transcription factor 25 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936641:202,522...232,962
Ensembl chrNW_004936641:202,624...232,962 		JBrowse link
G Trip4 thyroid hormone receptor interactor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:24,795,718...24,868,440
Ensembl chrNW_004936471:24,811,841...24,869,966 		JBrowse link
G Znf598 zinc finger protein 598, E3 ubiquitin ligase involved_in ISO (PMID:32099016) UniProt PMID:32099016 NCBI chrNW_004936694:2,019,714...2,035,885
Ensembl chrNW_004936694:2,023,806...2,036,864 		JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase acts_upstream_of_or_within ISO (PMID:12023972) RGD
MGI		 PMID:11741948 PMID:12023972 RGD:730275 NCBI chrNW_004936561:6,314,797...6,333,961
Ensembl chrNW_004936561:6,314,705...6,334,439 		JBrowse link
sarcosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sardh sarcosine dehydrogenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936669:3,244,302...3,297,906
Ensembl chrNW_004936669:3,243,762...3,297,905 		JBrowse link
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:32558204) Ensembl
MGI		 PMID:32558204 GO_REF:0000107 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987 		JBrowse link
G Ccnf cyclin F involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936694:1,596,897...1,620,588
Ensembl chrNW_004936694:1,596,766...1,620,643 		JBrowse link
G Cul1 cullin 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936527:4,971,002...5,019,465
Ensembl chrNW_004936527:4,971,000...5,019,562 		JBrowse link
G Cul2 cullin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936574:3,310,304...3,408,389
Ensembl chrNW_004936574:3,309,941...3,408,370 		JBrowse link
G Cul5 cullin 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936551:641,469...724,706
Ensembl chrNW_004936551:641,463...724,711 		JBrowse link
G Fbxl12 F-box and leucine rich repeat protein 12 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936659:285,780...297,526
Ensembl chrNW_004936659:286,845...296,603 		JBrowse link
G Fbxl13 F-box and leucine rich repeat protein 13 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936479:20,315,495...20,522,639
Ensembl chrNW_004936479:20,315,495...20,522,640 		JBrowse link
G Fbxl15 F-box and leucine rich repeat protein 15 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936600:3,445,840...3,450,369
Ensembl chrNW_004936600:3,442,778...3,448,467 		JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936531:2,674,319...3,179,325 JBrowse link
G Fbxl18 F-box and leucine rich repeat protein 18 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936765:679,643...721,379
Ensembl chrNW_004936765:679,554...721,411 		JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936473:23,567,251...23,659,708
Ensembl chrNW_004936473:23,567,230...23,658,240 		JBrowse link
G Fbxl22 F-box and leucine rich repeat protein 22 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:24,131,046...24,139,835
Ensembl chrNW_004936471:24,132,226...24,136,676 		JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936511:4,259,066...4,280,501
Ensembl chrNW_004936511:4,258,548...4,283,285 		JBrowse link
G Fbxl4 F-box and leucine rich repeat protein 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936651:530,296...609,443
Ensembl chrNW_004936651:530,197...609,417 		JBrowse link
G Fbxl5 F-box and leucine rich repeat protein 5 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936477:12,279,521...12,312,927
Ensembl chrNW_004936477:12,279,541...12,313,007 		JBrowse link
G Fbxl7 F-box and leucine rich repeat protein 7 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936665:605,225...973,735
Ensembl chrNW_004936665:607,805...973,462 		JBrowse link
G Fbxl8 F-box and leucine rich repeat protein 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:17,634,867...17,638,489
Ensembl chrNW_004936475:17,634,864...17,638,785 		JBrowse link
G Fbxo2 F-box protein 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:521,235...526,151
Ensembl chrNW_004936474:521,123...526,959 		JBrowse link
G Fbxo27 F-box protein 27 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936661:1,931,036...1,936,548
Ensembl chrNW_004936661:1,931,025...1,936,526 		JBrowse link
G Fbxo3 F-box protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936533:4,200,791...4,232,929
Ensembl chrNW_004936533:4,200,757...4,234,145 		JBrowse link
G Fbxo31 F-box protein 31 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936641:1,801,539...1,831,988
Ensembl chrNW_004936641:1,801,548...1,830,440 		JBrowse link
G Fbxo36 F-box protein 36 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936525:6,454,343...6,486,948
Ensembl chrNW_004936525:6,459,299...6,486,952 		JBrowse link
G Fbxo38 F-box protein 38 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936504:6,319,026...6,369,487
Ensembl chrNW_004936504:6,318,940...6,369,480 		JBrowse link
G Fbxo4 F-box protein 4 involved_in IEA Ensembl
TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936518:855,304...873,927
Ensembl chrNW_004936518:854,721...874,018 		JBrowse link
G Fbxo44 F-box protein 44 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:526,191...531,825
Ensembl chrNW_004936474:525,862...532,152 		JBrowse link
G Fbxo48 F-box protein 48 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936491:12,854,829...12,857,682
Ensembl chrNW_004936491:12,851,539...12,857,692 		JBrowse link
G Fbxo6 F-box protein 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:531,873...538,596
Ensembl chrNW_004936474:533,254...542,907 		JBrowse link
G Fbxo9 F-box protein 9 involved_in IEA InterPro
TreeGrafter
UniProt
Ensembl		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936476:7,769,355...7,809,688
Ensembl chrNW_004936476:7,769,295...7,810,235 		JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936609:3,256,658...3,341,918
Ensembl chrNW_004936609:3,256,657...3,341,994 		JBrowse link
G Fbxw4 F-box and WD repeat domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936600:4,072,749...4,162,220
Ensembl chrNW_004936600:4,073,384...4,161,588 		JBrowse link
G Fbxw5 F-box and WD repeat domain containing 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936669:988,615...993,053
Ensembl chrNW_004936669:988,963...993,843 		JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936689:2,261,163...2,449,951
Ensembl chrNW_004936689:2,259,477...2,344,764 		JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:24854087) UniProt PMID:24854087 NCBI chrNW_004936567:3,704,672...3,764,111 JBrowse link
G LOC101967492 S-phase kinase-associated protein 1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936574:1,419,750...1,420,850 JBrowse link
G Nccrp1 NCCRP1, F-box associated domain containing involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936661:2,057,664...2,060,519
Ensembl chrNW_004936661:2,057,664...2,060,526 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:15103331), (PMID:22017875), (PMID:22017876), (PMID:36608670)
(MGI:4821082|PMID:12140560)		 UniProt PMID:12140560 PMID:15103331 PMID:22017875 PMID:22017876 PMID:36608670 MGI:4821082 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835 		JBrowse link
G Skp1 S-phase kinase associated protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936647:1,073,647...1,090,841
Ensembl chrNW_004936647:1,072,855...1,094,139 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936518:5,635,856...5,664,057
Ensembl chrNW_004936518:5,637,331...5,664,778 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17636028) Ensembl
MGI		 PMID:17636028 GO_REF:0000107 NCBI chrNW_004936758:101,629...225,496
Ensembl chrNW_004936758:101,620...225,525 		JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scly selenocysteine lyase involved_in ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chrNW_004936525:381,188...407,544
Ensembl chrNW_004936525:381,168...407,599 		JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase like 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936712:684,711...699,714
Ensembl chrNW_004936712:681,133...699,792 		JBrowse link
spermidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhps deoxyhypusine synthase ISO RGD PMID:7721768 RGD:2316236 NCBI chrNW_004936659:1,803,581...1,810,121
Ensembl chrNW_004936659:1,800,942...1,810,224 		JBrowse link
G Paox polyamine oxidase involved_in ISO
IEA		 RGD
Ensembl		 PMID:7560898 GO_REF:0000107 RGD:7244191 NCBI chrNW_004936486:19,503,631...19,511,918
Ensembl chrNW_004936486:19,503,631...19,511,920 		JBrowse link
spermine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Paox polyamine oxidase involved_in ISO
IEA		 RGD
Ensembl		 PMID:7560898 GO_REF:0000107 RGD:7244191 NCBI chrNW_004936486:19,503,631...19,511,918
Ensembl chrNW_004936486:19,503,631...19,511,920 		JBrowse link
G Smox spermine oxidase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12141946) RGD
MGI
Ensembl		 PMID:12141946 PMID:15541750 GO_REF:0000107 RGD:7244190 NCBI chrNW_004936485:14,566,570...14,603,323
Ensembl chrNW_004936485:14,566,277...14,603,338 		JBrowse link
sphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:26,994,549...27,099,758
Ensembl chrNW_004936470:26,994,215...27,100,999 		JBrowse link
G Sgpl1 sphingosine-1-phosphate lyase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936521:7,850,370...7,899,998
Ensembl chrNW_004936521:7,848,972...7,900,041 		JBrowse link
G Vps54 VPS54 subunit of GARP complex involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936491:8,835,397...8,922,403
Ensembl chrNW_004936491:8,833,285...8,922,711 		JBrowse link
sphingomyelin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101955719 sphingomyelin phosphodiesterase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:8,139,207...8,142,061 JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23973266) UniProt
MGI
TreeGrafter
Ensembl
InterPro		 PMID:23973266 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936842:448,315...452,557
Ensembl chrNW_004936842:447,991...452,630 		JBrowse link
G Smpd2 sphingomyelin phosphodiesterase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23973266) Ensembl
MGI		 PMID:23973266 GO_REF:0000107 NCBI chrNW_004936564:5,565,205...5,568,474
Ensembl chrNW_004936564:5,564,784...5,568,956 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23973266) Ensembl
MGI		 PMID:23973266 GO_REF:0000107 NCBI chrNW_004936475:18,667,563...18,755,132
Ensembl chrNW_004936475:18,671,428...18,755,208 		JBrowse link
G Smpd4 sphingomyelin phosphodiesterase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936619:2,647,880...2,676,371
Ensembl chrNW_004936619:2,647,967...2,676,488 		JBrowse link
G Smpdl3a sphingomyelin phosphodiesterase acid like 3A NOT|involved_in ISO
IEA		 (PMID:26783088) UniProt
InterPro		 PMID:26783088 GO_REF:0000002 NCBI chrNW_004936802:1,070,919...1,089,222
Ensembl chrNW_004936802:1,070,683...1,088,614 		JBrowse link
G Smpdl3b sphingomyelin phosphodiesterase acid like 3B involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936474:12,158,628...12,179,993
Ensembl chrNW_004936474:12,158,628...12,179,993 		JBrowse link
substance P catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ece1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:7,034,134...7,083,005
Ensembl chrNW_004936474:7,034,134...7,083,005 		JBrowse link
G LOC101968921 angiotensin-converting enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:4,157,847...4,178,156
Ensembl chrNW_004936541:4,157,393...4,178,177 		JBrowse link
G Mme membrane metalloendopeptidase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936519:2,513,896...2,595,896
Ensembl chrNW_004936519:2,513,704...2,595,971 		JBrowse link
succinyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:26,079,298...26,095,466
Ensembl chrNW_004936475:26,079,275...26,089,889 		JBrowse link
G Nudt8 nudix hydrolase 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:2,159,654...2,161,657 JBrowse link
threonine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcat glycine C-acetyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936492:3,307,015...3,313,441
Ensembl chrNW_004936492:3,304,031...3,313,475 		JBrowse link
G LOC101961581 L-threonine 3-dehydrogenase, mitochondrial-like involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936675:3,093,246...3,110,076 JBrowse link
G LOC101975053 probable low-specificity L-threonine aldolase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:2,846,435...2,852,176 JBrowse link
G LOC101977937 probable low-specificity L-threonine aldolase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:2,839,027...2,843,333 JBrowse link
G Sds serine dehydratase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936668:3,208,810...3,213,465
Ensembl chrNW_004936668:3,206,458...3,215,617 		JBrowse link
G Sdsl serine dehydratase like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936668:3,222,894...3,232,736
Ensembl chrNW_004936668:3,222,904...3,232,626 		JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
thymine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family member A1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:2768248 GO_REF:0000107 GO_REF:0000118 RGD:1599052 NCBI chrNW_004936488:3,320,357...3,340,463
Ensembl chrNW_004936488:3,318,422...3,340,626 		JBrowse link
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
G Dpys dihydropyrimidinase involved_in ISO PMID:8307005 UniProt PMID:8307005 RGD:1624990 NCBI chrNW_004936470:39,564,431...39,637,394
Ensembl chrNW_004936470:39,564,335...39,637,544 		JBrowse link
thyroid hormone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dio2 iodothyronine deiodinase 2 acts_upstream_of_or_within ISO (PMID:11731615) MGI PMID:11731615 NCBI chrNW_004936488:8,769,555...8,783,157 JBrowse link
G Dio3 iodothyronine deiodinase 3 acts_upstream_of_or_within
involved_in		 ISO (PMID:16410833)
(PMID:20203194)
(PMID:20203194), (PMID:25002520)		 MGI PMID:16410833 PMID:20203194 PMID:25002520 NCBI chrNW_004936604:5,241,877...5,243,910 JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chrNW_004936469:40,858,338...40,904,807
Ensembl chrNW_004936469:40,858,338...40,904,807 		JBrowse link
G Afmid arylformamidase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004936594:2,794,927...2,805,689
Ensembl chrNW_004936594:2,794,894...2,808,100 		JBrowse link
G Haao 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004936508:8,971,516...8,987,235
Ensembl chrNW_004936508:8,971,477...8,986,404 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936843:658,058...672,662
Ensembl chrNW_004936843:657,979...672,700 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000117 NCBI chrNW_004936843:595,237...649,390
Ensembl chrNW_004936843:594,968...649,390 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,674,612...3,715,036
Ensembl chrNW_004936664:3,675,805...3,686,262 		JBrowse link
G Kmo kynurenine 3-monooxygenase involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936526:8,877,085...8,928,280
Ensembl chrNW_004936526:8,877,434...8,919,548 		JBrowse link
G Kynu kynureninase involved_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chrNW_004936469:33,632,885...33,805,158
Ensembl chrNW_004936469:33,632,892...33,734,433 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 GO_REF:0000117 NCBI chrNW_004936576:2,537,702...2,555,790
Ensembl chrNW_004936576:2,537,702...2,555,785 		JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004936469:33,632,885...33,805,158
Ensembl chrNW_004936469:33,632,892...33,734,433 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:7236232 GO_REF:0000118 RGD:2303721 NCBI chrNW_004936576:2,537,702...2,555,790
Ensembl chrNW_004936576:2,537,702...2,555,785 		JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,674,612...3,715,036
Ensembl chrNW_004936664:3,675,805...3,686,262 		JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15866519) UniProt
MGI
InterPro		 PMID:15866519 GO_REF:0000002 GO_REF:0000041 NCBI chrNW_004936594:2,794,927...2,805,689
Ensembl chrNW_004936594:2,794,894...2,808,100 		JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:11751753), (PMID:2419335) RGD
UniProt
MGI
TreeGrafter
InterPro
Ensembl		 PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 RGD:2290190 RGD:2290543 NCBI chrNW_004936843:658,058...672,662
Ensembl chrNW_004936843:657,979...672,700 		JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17671174)
(PMID:17499941)		 Ensembl
UniProt
MGI
TreeGrafter
InterPro		 PMID:17499941 PMID:17671174 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936843:595,237...649,390
Ensembl chrNW_004936843:594,968...649,390 		JBrowse link
G Kynu kynureninase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936469:33,632,885...33,805,158
Ensembl chrNW_004936469:33,632,892...33,734,433 		JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in IEA Ensembl
UniProt
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chrNW_004936576:2,537,702...2,555,790
Ensembl chrNW_004936576:2,537,702...2,555,785 		JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fah fumarylacetoacetate hydrolase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936471:38,140,324...38,174,472
Ensembl chrNW_004936471:38,140,273...38,174,702 		JBrowse link
G Gstz1 glutathione S-transferase zeta 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004936488:6,141,913...6,153,591
Ensembl chrNW_004936488:6,141,317...6,154,075 		JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936664:3,674,612...3,715,036
Ensembl chrNW_004936664:3,675,805...3,686,262 		JBrowse link
G LOC101957153 4-hydroxyphenylpyruvate dioxygenase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936558:2,574,957...2,583,008 JBrowse link
G LOC101977193 4-hydroxyphenylpyruvate dioxygenase-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936558:2,521,174...2,530,776 JBrowse link
G Tat tyrosine aminotransferase involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:22,190,282...22,199,398
Ensembl chrNW_004936475:22,189,728...22,199,672 		JBrowse link
ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:8,692,969...8,727,252
Ensembl chrNW_004936475:8,692,844...8,727,385 		JBrowse link
G Anapc11 anaphase promoting complex subunit 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:5,402,290...5,407,510
Ensembl chrNW_004936594:5,402,453...5,407,509 		JBrowse link
G Anapc2 anaphase promoting complex subunit 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936669:797,475...808,952
Ensembl chrNW_004936669:797,318...811,721 		JBrowse link
G Ankib1 ankyrin repeat and IBR domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936803:1,393,918...1,423,086
Ensembl chrNW_004936803:1,393,954...1,423,068 		JBrowse link
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936488:3,835,021...3,882,055
Ensembl chrNW_004936488:3,835,075...3,876,403 		JBrowse link
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10431818) Ensembl
MGI
TreeGrafter		 PMID:10431818 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:31,822,592...31,947,624
Ensembl chrNW_004936471:31,822,592...31,947,624 		JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10431818) Ensembl
MGI
TreeGrafter		 PMID:10431818 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936529:648,661...713,616
Ensembl chrNW_004936529:648,675...713,675 		JBrowse link
G Ark2n arkadia (RNF111) N-terminal like PKA signaling regulator 2N involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936517:598,809...689,540
Ensembl chrNW_004936517:598,772...688,893 		JBrowse link
G Arrb1 arrestin beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936498:4,089,621...4,172,749
Ensembl chrNW_004936498:4,094,893...4,172,755 		JBrowse link
G Arrdc1 arrestin domain containing 1 NOT|involved_in ISO
IEA		 (PMID:27462458) UniProt
Ensembl		 PMID:27462458 GO_REF:0000107 NCBI chrNW_004936669:484,446...491,843
Ensembl chrNW_004936669:483,134...491,856 		JBrowse link
G Arrdc4 arrestin domain containing 4 NOT|involved_in ISO (MGI:5804712|PMID:27462458) UniProt PMID:27462458 MGI:5804712 NCBI chrNW_004936483:5,389,448...5,401,995
Ensembl chrNW_004936483:5,389,422...5,402,076 		JBrowse link
G Asb2 ankyrin repeat and SOCS box containing 2 involved_in ISO (MGI:6102779|PMID:26343497)
(PMID:24044920)		 UniProt PMID:24044920 PMID:26343497 MGI:6102779 NCBI chrNW_004936733:1,813,569...1,849,805
Ensembl chrNW_004936733:1,813,548...1,849,806 		JBrowse link
G Ate1 arginyltransferase 1 involved_in ISO (PMID:34893540) UniProt PMID:34893540 NCBI chrNW_004936486:10,714,287...10,854,982
Ensembl chrNW_004936486:10,713,527...10,856,345 		JBrowse link
G Atxn3 ataxin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17764659) Ensembl
MGI		 PMID:17764659 GO_REF:0000107 NCBI chrNW_004936733:306,400...347,161
Ensembl chrNW_004936733:310,836...347,112 		JBrowse link
G Bag6 BAG cochaperone 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936727:1,866,235...1,885,266
Ensembl chrNW_004936727:1,873,413...1,885,366 		JBrowse link
G Bap1 BRCA1 associated protein 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936473:3,239,009...3,247,806
Ensembl chrNW_004936473:3,239,010...3,247,806 		JBrowse link
G Bfar bifunctional apoptosis regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:2,811,967...2,839,357
Ensembl chrNW_004936501:2,811,907...2,841,258 		JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936600:4,215,219...4,424,498
Ensembl chrNW_004936600:4,213,956...4,397,987 		JBrowse link
G Cbl Cbl proto-oncogene involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936542:4,136,389...4,235,746
Ensembl chrNW_004936542:4,136,511...4,228,288 		JBrowse link
G Cblc Cbl proto-oncogene C involved_in ISO (PMID:14661060) BHF-UCL PMID:14661060 NCBI chrNW_004936706:1,436,732...1,450,485 JBrowse link
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936588:160,066...167,259
Ensembl chrNW_004936588:161,455...165,656 		JBrowse link
G Chfr checkpoint with forkhead and ring finger domains involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15793587) Ensembl
MGI
TreeGrafter		 PMID:15793587 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936660:2,725,019...2,754,564
Ensembl chrNW_004936660:2,724,989...2,754,586 		JBrowse link
G Cnot4 CCR4-NOT transcription complex subunit 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936592:195,566...321,131
Ensembl chrNW_004936592:195,558...321,145 		JBrowse link
G Cops3 COP9 signalosome subunit 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936741:905,593...931,148
Ensembl chrNW_004936741:905,252...931,408 		JBrowse link
G Cul1 cullin 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936527:4,971,002...5,019,465
Ensembl chrNW_004936527:4,971,000...5,019,562 		JBrowse link
G Cul2 cullin 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936574:3,310,304...3,408,389
Ensembl chrNW_004936574:3,309,941...3,408,370 		JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25401743) MGI
Ensembl
InterPro		 PMID:25401743 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936569:6,067,230...6,131,467
Ensembl chrNW_004936569:6,065,367...6,132,316 		JBrowse link
G Cul4a cullin 4A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19481525) Ensembl
MGI
InterPro		 PMID:19481525 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936472:409,083...432,442
Ensembl chrNW_004936472:408,659...432,379 		JBrowse link
G Cul4b cullin 4B involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936479:9,490,717...9,535,998
Ensembl chrNW_004936479:9,479,133...9,534,262 		JBrowse link
G Cul5 cullin 5 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936551:641,469...724,706
Ensembl chrNW_004936551:641,463...724,711 		JBrowse link
G Cul7 cullin 7 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:16,886,416...16,901,532
Ensembl chrNW_004936476:16,887,610...16,901,458 		JBrowse link
G Cul9 cullin 9 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936476:16,743,221...16,779,293
Ensembl chrNW_004936476:16,743,202...16,779,298 		JBrowse link
G Dcst1 DC-STAMP domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936580:4,571,349...4,586,459
Ensembl chrNW_004936580:4,571,319...4,586,394 		JBrowse link
G Ddb1 damage specific DNA binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936581:1,710,382...1,742,598
Ensembl chrNW_004936581:1,710,382...1,742,598 		JBrowse link
G Disc1 DISC1 scaffold protein acts_upstream_of ISO (PMID:20880836) MGI PMID:20880836 NCBI chrNW_004936484:19,151,752...19,237,435 JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936557:1,347,991...1,389,836
Ensembl chrNW_004936557:1,347,991...1,389,836 		JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936536:8,844,778...8,853,442
Ensembl chrNW_004936536:8,844,575...8,851,146 		JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936577:4,486,617...4,516,379
Ensembl chrNW_004936577:4,486,885...4,513,555 		JBrowse link
G Eloc elongin C involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936648:2,606,075...2,629,997
Ensembl chrNW_004936648:2,604,283...2,630,035 		JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO (PMID:31628468) MGI PMID:31628468 NCBI chrNW_004936517:841,402...941,054
Ensembl chrNW_004936517:841,411...939,581 		JBrowse link
G Fbxl12 F-box and leucine rich repeat protein 12 acts_upstream_of_or_within ISO (PMID:10531037) MGI PMID:10531037 NCBI chrNW_004936659:285,780...297,526
Ensembl chrNW_004936659:286,845...296,603 		JBrowse link
G Fbxl14 F-box and leucine rich repeat protein 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936606:1,802,833...1,806,870
Ensembl chrNW_004936606:1,805,827...1,806,870 		JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21343341) Ensembl
MGI		 PMID:21343341 GO_REF:0000107 NCBI chrNW_004936473:23,567,251...23,659,708
Ensembl chrNW_004936473:23,567,230...23,658,240 		JBrowse link
G Fbxo10 F-box protein 10 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936524:5,285,844...5,355,212
Ensembl chrNW_004936524:5,283,828...5,355,392 		JBrowse link
G Fbxo11 F-box protein 11 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936508:4,622,695...4,708,694
Ensembl chrNW_004936508:4,685,595...4,708,694 		JBrowse link
G Fbxo2 F-box protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15723043) Ensembl
MGI		 PMID:15723043 GO_REF:0000107 NCBI chrNW_004936474:521,235...526,151
Ensembl chrNW_004936474:521,123...526,959 		JBrowse link
G Fbxo22 F-box protein 22 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:19319192) Ensembl
MGI		 PMID:19319192 GO_REF:0000107 NCBI chrNW_004936471:36,232,749...36,255,772
Ensembl chrNW_004936471:36,232,583...36,255,672 		JBrowse link
G Fbxo4 F-box protein 4 involved_in ISO (PMID:16275645) UniProt PMID:16275645 NCBI chrNW_004936518:855,304...873,927
Ensembl chrNW_004936518:854,721...874,018 		JBrowse link
G Fbxo45 F-box protein 45 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936784:1,162,950...1,177,407
Ensembl chrNW_004936784:1,162,950...1,179,068 		JBrowse link
G Fbxo6 F-box protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:531,873...538,596
Ensembl chrNW_004936474:533,254...542,907 		JBrowse link
G Fbxo7 F-box protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936492:7,261,442...7,276,779
Ensembl chrNW_004936492:7,261,009...7,276,943 		JBrowse link
G Fbxo8 F-box protein 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10531037) Ensembl
MGI		 PMID:10531037 GO_REF:0000107 NCBI chrNW_004936516:5,281,972...5,333,890
Ensembl chrNW_004936516:5,282,768...5,333,695 		JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936754:1,113,835...1,128,881
Ensembl chrNW_004936754:1,113,790...1,128,875 		JBrowse link
G Hace1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936564:1,499,918...1,582,719
Ensembl chrNW_004936564:1,499,634...1,582,759 		JBrowse link
G Hdac6 histone deacetylase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16810319) Ensembl
MGI		 PMID:16810319 GO_REF:0000107 NCBI chrNW_004936721:757,500...778,416
Ensembl chrNW_004936721:758,181...778,053 		JBrowse link
G Hectd1 HECT domain E3 ubiquitin protein ligase 1 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936494:5,761,801...5,853,673
Ensembl chrNW_004936494:5,758,347...5,851,952 		JBrowse link
G Hectd2 HECT domain E3 ubiquitin protein ligase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936601:3,025,900...3,088,898
Ensembl chrNW_004936601:3,028,172...3,080,918 		JBrowse link
G Herc3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936685:1,041,176...1,163,290
Ensembl chrNW_004936685:1,054,302...1,163,704 		JBrowse link
G Herc4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936521:10,176,191...10,294,761
Ensembl chrNW_004936521:10,176,132...10,292,845 		JBrowse link
G Herc6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936685:863,198...916,774
Ensembl chrNW_004936685:863,212...911,202 		JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21600962) Ensembl
MGI
TreeGrafter		 PMID:21600962 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936475:9,091,115...9,102,101
Ensembl chrNW_004936475:9,091,176...9,102,109 		JBrowse link
G Itch itchy E3 ubiquitin protein ligase acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15678106)
(PMID:14973438), (PMID:15678106)		 MGI
InterPro
Ensembl		 PMID:14973438 PMID:15678106 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936561:6,140,236...6,265,734
Ensembl chrNW_004936561:6,140,234...6,265,767 		JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25401743) MGI
Ensembl		 PMID:25401743 GO_REF:0000107 NCBI chrNW_004936769:1,171,725...1,197,497
Ensembl chrNW_004936769:1,171,707...1,197,537 		JBrowse link
G Kctd19 potassium channel tetramerization domain containing 19 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936475:17,746,121...17,776,537
Ensembl chrNW_004936475:17,744,645...17,814,726 		JBrowse link
G Kctd21 potassium channel tetramerization domain containing 21 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936498:6,730,073...6,750,115
Ensembl chrNW_004936498:6,732,228...6,733,010 		JBrowse link
G Kctd6 potassium channel tetramerization domain containing 6 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936473:2,527,624...2,537,596
Ensembl chrNW_004936473:2,527,392...2,537,602 		JBrowse link
G Keap1 kelch like ECH associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:785,059...793,775
Ensembl chrNW_004936659:782,340...793,688 		JBrowse link
G Klf1 KLF transcription factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936659:1,946,614...1,950,003
Ensembl chrNW_004936659:1,947,075...1,950,003 		JBrowse link
G Klhl15 kelch like family member 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936624:552,220...593,546
Ensembl chrNW_004936624:552,177...591,578 		JBrowse link
G Klhl22 kelch like family member 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:2,854,915...2,899,386
Ensembl chrNW_004936619:2,854,803...2,899,460 		JBrowse link
G Klhl25 kelch like family member 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936483:12,001,111...12,033,158
Ensembl chrNW_004936483:12,000,514...12,009,705 		JBrowse link
G Klhl3 kelch like family member 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936597:4,592,654...4,696,348
Ensembl chrNW_004936597:4,592,621...4,696,377 		JBrowse link
G Klhl8 kelch like family member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936920:4,418...22,583
Ensembl chrNW_004936920:4,186...25,059 		JBrowse link
G Lnx1 ligand of numb-protein X 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11782429) Ensembl
MGI
TreeGrafter		 PMID:11782429 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936482:16,194,736...16,361,765
Ensembl chrNW_004936482:16,190,940...16,287,185 		JBrowse link
G LOC101956702 elongin-C-like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936695:2,581,087...2,581,569 JBrowse link
G LOC101960762 E3 ubiquitin-protein ligase RNF26-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936496:14,440,894...14,442,514 JBrowse link
G LOC101961559 E3 ubiquitin-protein ligase RNF126 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:231,723...237,969
Ensembl chrNW_004936588:255,639...260,291
Ensembl chrNW_004936588:255,639...260,291 		JBrowse link
G LOC101967492 S-phase kinase-associated protein 1-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936574:1,419,750...1,420,850 JBrowse link
G LOC101970285 E3 ubiquitin-protein ligase RBX1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936672:2,386,070...2,386,390 JBrowse link
G LOC101972658 ubiquilin-1-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937097:143,260...144,837 JBrowse link
G LOC101973806 RING finger protein 11-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937995:12,114...12,611 JBrowse link
G LOC101977099 ubiquitin-conjugating enzyme E2 R2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936518:9,069,985...9,070,551 JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO RGD PMID:12049732 RGD:729224 NCBI chrNW_004936480:11,082,811...11,156,691
Ensembl chrNW_004936480:11,083,605...11,156,691 		JBrowse link
G Mdm2 MDM2 proto-oncogene acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24506068)
(PMID:12145204), (PMID:17591690)		 MGI
Ensembl		 PMID:12145204 PMID:17591690 PMID:24506068 GO_REF:0000107 NCBI chrNW_004936545:6,709,903...6,732,334 JBrowse link
G Mib1 MIB E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936550:1,439,652...1,577,804
Ensembl chrNW_004936550:1,439,646...1,573,637 		JBrowse link
G Mkrn2 makorin ring finger protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936602:1,114,271...1,144,045
Ensembl chrNW_004936602:1,114,832...1,144,251 		JBrowse link
G Mylip myosin regulatory light chain interacting protein involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936552:2,325,161...2,341,356
Ensembl chrNW_004936552:2,325,378...2,339,867 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936504:12,053,470...12,103,346 JBrowse link
G Ndfip2 Nedd4 family interacting protein 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936511:2,063,630...2,123,214
Ensembl chrNW_004936511:2,063,144...2,124,037 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18931680) Ensembl
MGI
InterPro		 PMID:18931680 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936471:17,254,777...17,374,725
Ensembl chrNW_004936471:17,252,234...17,374,804 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936497:6,106,284...6,318,339
Ensembl chrNW_004936497:6,106,268...6,318,354 		JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936594:5,206,222...5,251,042
Ensembl chrNW_004936594:5,205,659...5,251,026 		JBrowse link
G Ntan1 N-terminal asparagine amidase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:2,939,271...2,947,187
Ensembl chrNW_004936501:2,932,605...2,947,374 		JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936527:6,726,363...6,756,445
Ensembl chrNW_004936527:6,726,357...6,755,318 		JBrowse link
G Os9 OS9 endoplasmic reticulum lectin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936646:1,832,434...1,860,200
Ensembl chrNW_004936646:1,832,015...1,859,576 		JBrowse link
G Ppp1r11 protein phosphatase 1 regulatory inhibitor subunit 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936723:973,516...975,930
Ensembl chrNW_004936723:970,226...975,952 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936489:12,118,538...12,913,664
Ensembl chrNW_004936489:12,120,678...13,327,872 		JBrowse link
G Psma1 proteasome 20S subunit alpha 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936528:4,195,072...4,207,263
Ensembl chrNW_004936528:4,195,072...4,209,558 		JBrowse link
G Psma2 proteasome 20S subunit alpha 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936478:18,083,525...18,095,088
Ensembl chrNW_004936478:18,079,863...18,095,117 		JBrowse link
G Psma3 proteasome 20S subunit alpha 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936495:2,650,668...2,672,192
Ensembl chrNW_004936495:2,650,629...2,673,435 		JBrowse link
G Psma4 proteasome 20S subunit alpha 4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936471:36,508,045...36,516,033
Ensembl chrNW_004936471:36,508,017...36,516,062 		JBrowse link
G Psma6 proteasome 20S subunit alpha 6 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936494:9,443,176...9,467,697 JBrowse link
G Psma8 proteasome 20S subunit alpha 8 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936550:5,305,851...5,358,717
Ensembl chrNW_004936550:5,305,851...5,358,717 		JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936479:20,150,738...20,167,765
Ensembl chrNW_004936479:20,148,632...20,168,130 		JBrowse link
G Psmd11 proteasome 26S subunit, non-ATPase 11 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936538:2,420,618...2,456,163
Ensembl chrNW_004936538:2,418,454...2,456,411 		JBrowse link
G Psmd13 proteasome 26S subunit, non-ATPase 13 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936888:78,468...91,026
Ensembl chrNW_004936888:78,463...91,134 		JBrowse link
G Psmd3 proteasome 26S subunit, non-ATPase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936490:15,118,024...15,135,241
Ensembl chrNW_004936490:15,117,801...15,137,835 		JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936485:17,485,600...17,517,642
Ensembl chrNW_004936485:17,485,602...17,517,696 		JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936501:8,966,074...8,997,027
Ensembl chrNW_004936501:8,966,068...8,998,000 		JBrowse link
G Rbx1 ring-box 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835 		JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936481:13,919,006...13,973,868
Ensembl chrNW_004936481:13,919,257...13,966,677 		JBrowse link
G Rc3h2 ring finger and CCCH-type domains 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936487:11,341,663...11,393,275
Ensembl chrNW_004936487:11,341,700...11,389,859 		JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936598:436,559...453,137
Ensembl chrNW_004936598:436,260...453,137 		JBrowse link
G Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:139,690...203,600
Ensembl chrNW_004936538:139,723...203,600 		JBrowse link
G Rlim ring finger protein, LIM domain interacting involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936683:930,537...961,792
Ensembl chrNW_004936683:934,338...961,863 		JBrowse link
G Rnf11 ring finger protein 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11042109) TreeGrafter
MGI		 PMID:11042109 GO_REF:0000118 NCBI chrNW_004936522:9,554,361...9,582,675 JBrowse link
G Rnf111 ring finger protein 111 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16601693) Ensembl
MGI
TreeGrafter		 PMID:16601693 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:20,139,798...20,210,291
Ensembl chrNW_004936471:20,139,413...20,211,130 		JBrowse link
G Rnf114 ring finger protein 114 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936514:4,476,244...4,488,201
Ensembl chrNW_004936514:4,473,601...4,488,878 		JBrowse link
G Rnf123 ring finger protein 123 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936529:1,306,849...1,336,032
Ensembl chrNW_004936529:1,306,968...1,336,032 		JBrowse link
G Rnf125 ring finger protein 125 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936682:1,228,903...1,268,651
Ensembl chrNW_004936682:1,231,823...1,268,657 		JBrowse link
G Rnf128 ring finger protein 128 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936499:7,952,567...8,013,589
Ensembl chrNW_004936499:7,952,567...8,052,656 		JBrowse link
G Rnf13 ring finger protein 13 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936758:351,220...460,165
Ensembl chrNW_004936758:375,904...458,239 		JBrowse link
G Rnf14 ring finger protein 14 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936504:12,200,395...12,217,454
Ensembl chrNW_004936504:12,200,388...12,217,518 		JBrowse link
G Rnf144a ring finger protein 144A involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936532:3,969,108...4,047,022
Ensembl chrNW_004936532:3,969,081...4,046,976 		JBrowse link
G Rnf144b ring finger protein 144B involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936552:4,080,675...4,165,882
Ensembl chrNW_004936552:4,083,483...4,166,890 		JBrowse link
G Rnf146 ring finger protein 146 involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936639:2,394,566...2,417,452
Ensembl chrNW_004936639:2,393,150...2,417,982 		JBrowse link
G Rnf166 ring finger protein 166 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936641:987,476...994,535
Ensembl chrNW_004936641:990,568...993,498 		JBrowse link
G Rnf167 ring finger protein 167 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936677:2,766,724...2,771,111
Ensembl chrNW_004936677:2,766,907...2,770,225 		JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:22373579) UniProt PMID:22373579 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936755:331,658...367,604
Ensembl chrNW_004936755:331,619...367,533 		JBrowse link
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936470:42,965,790...43,007,487
Ensembl chrNW_004936470:42,965,284...43,007,487 		JBrowse link
G Rnf19b ring finger protein 19B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936474:15,827,800...15,850,405
Ensembl chrNW_004936474:15,827,303...15,849,632 		JBrowse link
G Rnf20 ring finger protein 20 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:9,690,611...9,715,579
Ensembl chrNW_004936524:9,690,566...9,717,173 		JBrowse link
G Rnf213 ring finger protein 213 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936594:4,241,006...4,331,841
Ensembl chrNW_004936594:4,241,396...4,331,868 		JBrowse link
G Rnf215 ring finger protein 215 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936904:288,838...295,183
Ensembl chrNW_004936904:288,773...298,725 		JBrowse link
G Rnf25 ring finger protein 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936569:1,109,279...1,115,736
Ensembl chrNW_004936569:1,108,207...1,115,949 		JBrowse link
G Rnf26 ring finger protein 26 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936542:4,265,226...4,268,037 JBrowse link
G Rnf34 ring finger protein 34 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936558:2,901,386...2,918,976
Ensembl chrNW_004936558:2,901,512...2,919,018 		JBrowse link
G Rnf40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chrNW_004936501:13,154,963...13,167,211
Ensembl chrNW_004936501:13,154,999...13,167,199 		JBrowse link
G Rnf43 ring finger protein 43 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936490:4,660,904...4,742,669
Ensembl chrNW_004936490:4,683,725...4,741,828 		JBrowse link
G Rnf5 ring finger protein 5 involved_in IEA InterPro
TreeGrafter
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936727:1,422,207...1,424,808
Ensembl chrNW_004936727:1,422,207...1,424,739 		JBrowse link
G Rnf6 ring finger protein 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16204183) Ensembl
MGI
TreeGrafter		 PMID:16204183 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936948:57,806...67,875
Ensembl chrNW_004936948:55,699...67,972 		JBrowse link
G Rnf7 ring finger protein 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936540:3,484,422...3,491,162
Ensembl chrNW_004936540:3,484,053...3,491,162 		JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO (PMID:22266820), (PMID:22373579) UniProt PMID:22266820 PMID:22373579 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936502:5,163,164...5,212,940 JBrowse link
G Siah1 siah E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:23001567) RGD
Ensembl
InterPro
MGI		 PMID:11786535 PMID:23001567 GO_REF:0000002 GO_REF:0000107 RGD:633984 NCBI chrNW_004936475:1,589,997...1,621,506
Ensembl chrNW_004936475:1,590,004...1,594,894 		JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936758:1,115,980...1,132,225
Ensembl chrNW_004936758:1,116,056...1,213,442 		JBrowse link
G Siah3 siah E3 ubiquitin protein ligase family member 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936857:341,879...406,806
Ensembl chrNW_004936857:339,615...406,806 		JBrowse link
G Skp1 S-phase kinase associated protein 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936647:1,073,647...1,090,841
Ensembl chrNW_004936647:1,072,855...1,094,139 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10790373)
(PMID:19056892)		 Ensembl
MGI		 PMID:10790373 PMID:19056892 GO_REF:0000107 NCBI chrNW_004936518:5,635,856...5,664,057
Ensembl chrNW_004936518:5,637,331...5,664,778 		JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936750:1,381,864...1,406,736
Ensembl chrNW_004936750:1,381,851...1,407,323 		JBrowse link
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 involved_in IEA InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936541:5,046,147...5,147,416
Ensembl chrNW_004936541:5,046,148...5,106,008 		JBrowse link
G Spop speckle type BTB/POZ protein acts_upstream_of_or_within ISO (PMID:19684112) MGI PMID:19684112 NCBI chrNW_004936490:11,894,449...11,969,730
Ensembl chrNW_004936490:11,894,406...11,970,155 		JBrowse link
G Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936623:3,448,787...3,455,670
Ensembl chrNW_004936623:3,427,761...3,455,670 		JBrowse link
G Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936709:945,322...948,101
Ensembl chrNW_004936709:945,201...951,441 		JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936540:2,953,837...3,021,430
Ensembl chrNW_004936540:2,953,831...3,021,485 		JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936501:328,767...330,963
Ensembl chrNW_004936501:326,451...330,983 		JBrowse link
G Syvn1 synoviolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936599:4,235,779...4,243,395
Ensembl chrNW_004936599:4,236,188...4,243,394 		JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:20181722) ParkinsonsUK-UCL PMID:20181722 NCBI chrNW_004936762:189,710...271,759 JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936477:21,665,955...21,670,667
Ensembl chrNW_004936477:21,665,275...21,670,668 		JBrowse link
G Tollip toll interacting protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936816:216,542...245,545
Ensembl chrNW_004936816:216,546...245,606 		JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:1,219,101...1,229,937
Ensembl chrNW_004936524:1,219,907...1,229,723 		JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24713655) Ensembl
MGI		 PMID:24713655 GO_REF:0000107 NCBI chrNW_004936561:5,984,044...5,992,536
Ensembl chrNW_004936561:5,984,079...5,992,536 		JBrowse link
G Trim25 tripartite motif containing 25 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936490:5,979,320...5,997,632
Ensembl chrNW_004936490:5,979,425...5,997,639 		JBrowse link
G Trim31 tripartite motif containing 31 involved_in ISO (PMID:27929086)
(MGI:5907951|PMID:27929086)		 UniProt PMID:27929086 MGI:5907951 NCBI chrNW_004936723:934,808...945,279 JBrowse link
G Trim32 tripartite motif containing 32 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936487:5,606,690...5,619,856
Ensembl chrNW_004936487:5,606,693...5,619,856 		JBrowse link
G Trip12 thyroid hormone receptor interactor 12 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936525:6,539,234...6,690,457
Ensembl chrNW_004936525:6,539,191...6,690,457 		JBrowse link
G Trpc4ap transient receptor potential cation channel subfamily C member 4 associated protein involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936561:5,642,265...5,721,377
Ensembl chrNW_004936561:5,642,249...5,721,377 		JBrowse link
G Ttc3 tetratricopeptide repeat domain 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936500:5,604,783...5,724,121 JBrowse link
G Uba1 ubiquitin like modifier activating enzyme 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936502:12,961,236...12,984,235
Ensembl chrNW_004936502:12,969,145...12,984,238 		JBrowse link
G Uba6 ubiquitin like modifier activating enzyme 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23499007) Ensembl
MGI
TreeGrafter		 PMID:23499007 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936582:780,911...901,734
Ensembl chrNW_004936582:780,892...869,026 		JBrowse link
G Ubd ubiquitin D involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936723:1,218,621...1,221,070
Ensembl chrNW_004936723:1,218,258...1,221,451 		JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B involved_in ISO
IEA		 RGD
Ensembl		 PMID:8048511 GO_REF:0000107 RGD:1299378 NCBI chrNW_004936647:891,357...913,963
Ensembl chrNW_004936647:891,996...911,033 		JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C involved_in ISO (PMID:18485873), (PMID:9122200) UniProt PMID:9122200 PMID:18485873 NCBI chrNW_004936514:7,204,332...7,208,340
Ensembl chrNW_004936514:7,199,539...7,207,655 		JBrowse link
G Ube2d1 ubiquitin conjugating enzyme E2 D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936614:4,621,702...4,655,200
Ensembl chrNW_004936614:4,621,127...4,655,244 		JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO RGD PMID:7826319 RGD:730002 NCBI chrNW_004936520:555,878...588,052
Ensembl chrNW_004936520:556,231...588,752 		JBrowse link
G Ube2h ubiquitin conjugating enzyme E2 H involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936579:5,253,842...5,359,834
Ensembl chrNW_004936579:5,253,795...5,360,027 		JBrowse link
G Ube2j2 ubiquitin conjugating enzyme E2 J2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936737:1,862,577...1,875,216
Ensembl chrNW_004936737:1,862,578...1,875,248 		JBrowse link
G Ube2l3 ubiquitin conjugating enzyme E2 L3 acts_upstream_of_or_within ISO (PMID:23499007) MGI PMID:23499007 NCBI chrNW_004936619:2,070,836...2,137,314
Ensembl chrNW_004936619:2,070,731...2,137,369 		JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N acts_upstream_of_or_within ISO (PMID:12039045) MGI PMID:12039045
G Ube2r2 ubiquitin conjugating enzyme E2 R2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936524:2,005,508...2,103,878
Ensembl chrNW_004936524:2,005,590...2,103,389 		JBrowse link
G Ube2z ubiquitin conjugating enzyme E2 Z involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23499007) Ensembl
MGI		 PMID:23499007 GO_REF:0000107 NCBI chrNW_004936490:12,518,137...12,540,272
Ensembl chrNW_004936490:12,523,293...12,540,166 		JBrowse link
G Ube3a ubiquitin protein ligase E3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16254014) InterPro
MGI
TreeGrafter
Ensembl		 PMID:16254014 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936471:41,187,665...41,290,345
Ensembl chrNW_004936471:41,187,612...41,283,517 		JBrowse link
G Ube3b ubiquitin protein ligase E3B involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936769:1,197,596...1,248,173
Ensembl chrNW_004936769:1,197,588...1,248,200 		JBrowse link
G Ube3c ubiquitin protein ligase E3C involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936797:452,597...529,631 JBrowse link
G Ube4b ubiquitination factor E4B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16314518) InterPro
MGI		 PMID:16314518 GO_REF:0000002 NCBI chrNW_004936623:3,934,439...4,051,083
Ensembl chrNW_004936623:3,934,310...4,051,146 		JBrowse link
G Ubl4a ubiquitin like 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:1,238,459...1,241,319
Ensembl chrNW_004936809:1,238,462...1,241,318 		JBrowse link
G Ubl7 ubiquitin like 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936471:33,464,321...33,478,584
Ensembl chrNW_004936471:33,464,466...33,478,667 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936828:543,651...588,673
Ensembl chrNW_004936828:542,407...588,679 		JBrowse link
G Ubqln2 ubiquilin 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936819:530,833...534,185
Ensembl chrNW_004936819:532,037...533,920 		JBrowse link
G Ubqln3 ubiquilin 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937097:127,419...130,105
Ensembl chrNW_004937097:127,463...130,105 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936580:5,299,864...5,316,583
Ensembl chrNW_004936580:5,301,389...5,315,756 		JBrowse link
G Ubqlnl ubiquilin like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004937097:119,321...121,135
Ensembl chrNW_004937097:119,321...121,135 		JBrowse link
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14585983)
(PMID:11689692)		 Ensembl
MGI		 PMID:11689692 PMID:14585983 GO_REF:0000107 NCBI chrNW_004936471:6,171,655...6,313,853
Ensembl chrNW_004936471:6,171,593...6,313,937 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14585983) Ensembl
MGI		 PMID:14585983 GO_REF:0000107 NCBI chrNW_004936476:17,178,981...17,322,600
Ensembl chrNW_004936476:17,181,214...17,322,163 		JBrowse link
G Ubr3 ubiquitin protein ligase E3 component n-recognin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936509:325,277...537,423
Ensembl chrNW_004936509:324,953...535,141 		JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936474:5,373,303...5,492,950
Ensembl chrNW_004936474:5,373,186...5,493,635 		JBrowse link
G Uchl1 ubiquitin C-terminal hydrolase L1 involved_in ISO
IEA		 RGD
InterPro
UniProt		 PMID:11850463 GO_REF:0000002 GO_REF:0000104 RGD:70392 NCBI chrNW_004936482:8,551,749...8,563,586
Ensembl chrNW_004936482:8,551,603...8,563,651 		JBrowse link
G Uchl3 ubiquitin C-terminal hydrolase L3 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936511:5,524,425...5,581,156
Ensembl chrNW_004936511:5,522,965...5,581,334 		JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936638:1,242,950...1,289,376
Ensembl chrNW_004936638:1,242,893...1,290,512 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004936619:3,395,130...3,419,704
Ensembl chrNW_004936619:3,395,687...3,419,472 		JBrowse link
G Uhrf1 ubiquitin like with PHD and ring finger domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,863,651...2,890,116
Ensembl chrNW_004936588:2,862,367...2,888,946 		JBrowse link
G Usp38 ubiquitin specific peptidase 38 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936535:5,146,327...5,178,184
Ensembl chrNW_004936535:5,146,327...5,178,205 		JBrowse link
G Vcp valosin containing protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16810319) Ensembl
MGI		 PMID:16810319 GO_REF:0000107 NCBI chrNW_004936524:3,085,959...3,102,461
Ensembl chrNW_004936524:3,085,500...3,102,466 		JBrowse link
G Wdr77 WD repeat domain 77 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936690:112,337...120,478
Ensembl chrNW_004936690:109,359...121,125 		JBrowse link
G Wdr81 WD repeat domain 81 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936538:7,856,263...7,868,249
Ensembl chrNW_004936538:7,856,185...7,868,259 		JBrowse link
G Wdr91 WD repeat domain 91 NOT|involved_in ISO (PMID:28404643) UniProt PMID:28404643 NCBI chrNW_004936579:734,151...763,672
Ensembl chrNW_004936579:734,109...766,748 		JBrowse link
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936544:965,189...1,048,530
Ensembl chrNW_004936544:979,774...1,047,101 		JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004936475:19,835,909...19,944,426
Ensembl chrNW_004936475:19,828,763...19,942,632 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISO (MGI:5573106|PMID:24753614) UniProt PMID:24753614 MGI:5573106 NCBI chrNW_004936657:2,891,171...2,895,409
Ensembl chrNW_004936657:2,891,907...2,896,174 		JBrowse link
G Znrf3 zinc and ring finger 3 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936657:3,064,199...3,119,903
Ensembl chrNW_004936657:3,064,201...3,119,684 		JBrowse link
G Znrf4 zinc and ring finger 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936588:3,142,687...3,143,793
Ensembl chrNW_004936588:3,142,736...3,143,793 		JBrowse link
ubiquitin-dependent protein catabolic process via the C-end degron rule pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul2 cullin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936574:3,310,304...3,408,389
Ensembl chrNW_004936574:3,309,941...3,408,370 		JBrowse link
G Cul4a cullin 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:409,083...432,442
Ensembl chrNW_004936472:408,659...432,379 		JBrowse link
G Dcaf12 DDB1 and CUL4 associated factor 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936524:2,239,972...2,272,885
Ensembl chrNW_004936524:2,238,602...2,273,349 		JBrowse link
G Fem1a fem-1 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:2,808,561...2,811,738
Ensembl chrNW_004936588:2,808,679...2,810,616 		JBrowse link
G Fem1b fem-1 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:28,115,873...28,135,834
Ensembl chrNW_004936471:28,115,684...28,135,825 		JBrowse link
G Fem1c fem-1 homolog C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936742:678,171...706,019
Ensembl chrNW_004936742:677,746...705,350 		JBrowse link
G Klhdc1 kelch domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936583:294,200...342,289
Ensembl chrNW_004936583:294,799...341,396 		JBrowse link
G Klhdc10 kelch domain containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936579:5,082,221...5,143,004
Ensembl chrNW_004936579:5,087,028...5,142,253 		JBrowse link
G Klhdc2 kelch domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936583:256,360...269,131
Ensembl chrNW_004936583:256,394...268,998 		JBrowse link
G Klhdc3 kelch domain containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936476:16,913,494...16,920,108
Ensembl chrNW_004936476:16,913,493...16,918,524 		JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:29779948), (PMID:34065512) UniProt PMID:29779948 PMID:34065512 NCBI chrNW_004936492:872,316...890,860
Ensembl chrNW_004936492:873,576...890,835 		JBrowse link
G Trpc4ap transient receptor potential cation channel subfamily C member 4 associated protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:5,642,265...5,721,377
Ensembl chrNW_004936561:5,642,249...5,721,377 		JBrowse link
ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp1a charged multivesicular body protein 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:366,563...376,303
Ensembl chrNW_004936641:366,569...376,337 		JBrowse link
G Chmp1b charged multivesicular body protein 1B involved_in ISO (PMID:17984323) ComplexPortal PMID:17984323 NCBI chrNW_004936626:391,942...394,440 JBrowse link
G Chmp2a charged multivesicular body protein 2A involved_in ISO (PMID:17984323) ComplexPortal PMID:17984323 NCBI chrNW_004937062:133,361...136,329 JBrowse link
G Chmp2b charged multivesicular body protein 2B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936610:2,282,925...2,320,554
Ensembl chrNW_004936610:2,281,066...2,321,211 		JBrowse link
G Chmp3 charged multivesicular body protein 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936712:1,023,994...1,044,727
Ensembl chrNW_004936712:1,023,989...1,044,728 		JBrowse link
G Chmp4a charged multivesicular body protein 4A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936722:341,066...344,928
Ensembl chrNW_004936722:341,307...345,104 		JBrowse link
G Chmp4b charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,756,360...6,798,964
Ensembl chrNW_004936561:6,756,307...6,799,290 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936656:2,531,654...2,558,106
Ensembl chrNW_004936656:2,531,576...2,558,106 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO (PMID:17984323) ComplexPortal PMID:17984323 NCBI chrNW_004936524:1,804,643...1,820,491 JBrowse link
G Chmp6 charged multivesicular body protein 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:4,769,409...4,775,186
Ensembl chrNW_004936594:4,769,466...4,774,293 		JBrowse link
G Chmp7 charged multivesicular body protein 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936555:6,730,284...6,757,816
Ensembl chrNW_004936555:6,745,738...6,756,467 		JBrowse link
G Hdac6 histone deacetylase 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17785525) Ensembl
MGI		 PMID:17785525 GO_REF:0000107 NCBI chrNW_004936721:757,500...778,416
Ensembl chrNW_004936721:758,181...778,053 		JBrowse link
G LOC101961559 E3 ubiquitin-protein ligase RNF126 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936588:231,723...237,969
Ensembl chrNW_004936588:255,639...260,291
Ensembl chrNW_004936588:255,639...260,291 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936471:17,254,777...17,374,725
Ensembl chrNW_004936471:17,252,234...17,374,804 		JBrowse link
G Plaa phospholipase A2 activating protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936611:2,665,294...2,698,372
Ensembl chrNW_004936611:2,665,370...2,700,538 		JBrowse link
G Ptpn23 protein tyrosine phosphatase non-receptor type 23 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936596:1,094,285...1,124,483
Ensembl chrNW_004936596:1,094,205...1,124,712 		JBrowse link
G Rnf115 ring finger protein 115 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936867:492,561...553,498
Ensembl chrNW_004936867:490,248...551,552 		JBrowse link
G Tsg101 tumor susceptibility 101 involved_in ISO (PMID:21757351)
(PMID:15611048)		 UniProt
HGNC-UCL		 PMID:15611048 PMID:21757351 NCBI chrNW_004936590:61,352...62,037 JBrowse link
G Ubap1 ubiquitin associated protein 1 involved_in IEA InterPro
TreeGrafter
Ensembl		 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936524:2,322,653...2,373,685
Ensembl chrNW_004936524:2,322,634...2,374,349 		JBrowse link
G Ubap1l ubiquitin associated protein 1 like involved_in IEA InterPro
TreeGrafter		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004936471:25,411,891...25,431,264
Ensembl chrNW_004936471:25,410,482...25,431,424 		JBrowse link
G Vps28 VPS28 subunit of ESCRT-I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:7,829,207...7,833,213
Ensembl chrNW_004936470:7,830,114...7,833,047 		JBrowse link
G Vps37a VPS37A subunit of ESCRT-I involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936573:6,306,218...6,343,544
Ensembl chrNW_004936573:6,306,536...6,340,271 		JBrowse link
G Vps37b VPS37B subunit of ESCRT-I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936558:1,745,041...1,776,562
Ensembl chrNW_004936558:1,744,914...1,776,574 		JBrowse link
G Vps37c VPS37C subunit of ESCRT-I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936581:1,843,330...1,850,895
Ensembl chrNW_004936581:1,843,281...1,850,937 		JBrowse link
G Vps37d VPS37D subunit of ESCRT-I involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936543:2,887,723...2,890,907
Ensembl chrNW_004936543:2,887,708...2,890,946 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,432,311...19,444,223
Ensembl chrNW_004936475:19,432,229...19,444,223 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,126,064...2,161,451
Ensembl chrNW_004936497:2,126,061...2,161,485 		JBrowse link
ubiquitin-dependent protein catabolic process via the N-end rule pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936471:6,171,655...6,313,853
Ensembl chrNW_004936471:6,171,593...6,313,937 		JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000104 NCBI chrNW_004936476:17,178,981...17,322,600
Ensembl chrNW_004936476:17,181,214...17,322,163 		JBrowse link
G Ubr3 ubiquitin protein ligase E3 component n-recognin 3 involved_in IEA InterPro
TreeGrafter
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936509:325,277...537,423
Ensembl chrNW_004936509:324,953...535,141 		JBrowse link
G Ubr4 ubiquitin protein ligase E3 component n-recognin 4 involved_in ISO (PMID:38030679) UniProt PMID:38030679 NCBI chrNW_004936474:5,373,303...5,492,950
Ensembl chrNW_004936474:5,373,186...5,493,635 		JBrowse link
ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chmp4b charged multivesicular body protein 4B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936561:6,756,360...6,798,964
Ensembl chrNW_004936561:6,756,307...6,799,290 		JBrowse link
G Chmp4c charged multivesicular body protein 4C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936656:2,531,654...2,558,106
Ensembl chrNW_004936656:2,531,576...2,558,106 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISO (PMID:22547407) UniProt PMID:22547407 NCBI chrNW_004936473:24,010,942...24,086,836
Ensembl chrNW_004936473:24,010,935...24,086,846 		JBrowse link
G Vps4a vacuolar protein sorting 4 homolog A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:19,432,311...19,444,223
Ensembl chrNW_004936475:19,432,229...19,444,223 		JBrowse link
G Vps4b vacuolar protein sorting 4 homolog B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936497:2,126,064...2,161,451
Ensembl chrNW_004936497:2,126,061...2,161,485 		JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936555:6,896,661...6,920,333
Ensembl chrNW_004936555:6,893,393...6,919,584 		JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) involved_in ISO (MGI:1927266|PMID:10369669), (MGI:4881347|PMID:21074248) UniProt PMID:10369669 PMID:21074248 MGI:1927266 MGI:4881347 NCBI chrNW_004936488:3,241,004...3,280,360
Ensembl chrNW_004936488:3,237,772...3,279,947 		JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004936636:406,389...446,167
Ensembl chrNW_004936636:407,186...446,125 		JBrowse link
UMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:39,564,431...39,637,394
Ensembl chrNW_004936470:39,564,335...39,637,544 		JBrowse link
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936594:430,274...432,027
Ensembl chrNW_004936594:430,506...432,095 		JBrowse link
G Upb1 beta-ureidopropionase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936619:668,380...713,720
Ensembl chrNW_004936619:668,351...696,306 		JBrowse link
G Upp1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936478:22,508,602...22,531,604
Ensembl chrNW_004936478:22,508,559...22,531,898 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (PMID:14715930) MGI PMID:14715930 NCBI chrNW_004936469:20,465,767...20,513,084
Ensembl chrNW_004936469:20,465,767...20,513,075 		JBrowse link
uracil catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936537:1,660,461...2,439,305
Ensembl chrNW_004936537:1,660,477...2,439,273 		JBrowse link
G Dpys dihydropyrimidinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936470:39,564,431...39,637,394
Ensembl chrNW_004936470:39,564,335...39,637,544 		JBrowse link
urate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966455 uricase involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA UniProt
TreeGrafter
Ensembl		 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
uridine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upp1 uridine phosphorylase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936478:22,508,602...22,531,604
Ensembl chrNW_004936478:22,508,559...22,531,898 		JBrowse link
G Upp2 uridine phosphorylase 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936469:20,465,767...20,513,084
Ensembl chrNW_004936469:20,465,767...20,513,075 		JBrowse link
UTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936636:406,389...446,167
Ensembl chrNW_004936636:407,186...446,125 		JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family member A1 involved_in ISO
IEA		 RGD
TreeGrafter
Ensembl		 PMID:2768248 GO_REF:0000107 GO_REF:0000118 RGD:1599052 NCBI chrNW_004936488:3,320,357...3,340,463
Ensembl chrNW_004936488:3,318,422...3,340,626 		JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004936501:13,467,603...13,471,810
Ensembl chrNW_004936501:13,467,305...13,471,858 		JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004936478:4,118,752...4,219,908 JBrowse link
G Hibch 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004936506:7,811,624...7,882,861
Ensembl chrNW_004936506:7,811,600...7,882,642 		JBrowse link
G LOC101962064 3-hydroxyisobutyrate dehydrogenase, mitochondrial-like involved_in IEA UniProt
TreeGrafter		 GO_REF:0000041 GO_REF:0000118 NCBI chrNW_004936479:147,125...148,800 JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936809:615,133...634,618
Ensembl chrNW_004936809:615,139...635,990 		JBrowse link
xanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966455 uricase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936608:1,213,940...1,232,214 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004936493:1,762,814...1,824,501
Ensembl chrNW_004936493:1,762,869...1,823,238 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15969
    metabolic process 9630
      organic substance metabolic process 9204
        organonitrogen compound metabolic process 4703
          organonitrogen compound catabolic process 1345
            2-chloro-N-isopropylacetanilide catabolic process 0
            3-methylquinoline catabolic process 0
            7,8-didemethyl-8-hydroxy-5-deazariboflavin catabolic process 0
            N',N'',N'''-triacetylfusarinine C catabolic process 0
            N-acetylneuraminate catabolic process 5
            achromobactin catabolic process 0
            alkaloid catabolic process + 1
            allantoin catabolic process + 1
            alpha-amino acid catabolic process + 88
            amine catabolic process + 18
            aminoglycan catabolic process + 33
            aromatic amino acid family catabolic process + 17
            bacitracin A catabolic process 0
            biotin catabolic process 0
            bradykinin catabolic process 7
            branched-chain amino acid catabolic process + 22
            calcitonin catabolic process 1
            carbazole catabolic process 0
            cellular modified amino acid catabolic process + 25
            cyanate catabolic process 0
            depsipeptide catabolic process + 0
            ectoine catabolic process 0
            fatty acid primary amide catabolic process 0
            flavin-containing compound catabolic process + 1
            formamide catabolic process 0
            fructoselysine catabolic process 0
            gliotoxin catabolic process 0
            glucosinolate catabolic process + 0
            glutathione derivative catabolic process + 0
            glycopeptide catabolic process 0
            histidine catabolic process + 5
            imidazole-containing compound catabolic process + 1
            indole-containing compound catabolic process + 9
            lactam catabolic process + 0
            leukotriene D4 catabolic process 2
            mitomycin C catabolic process 0
            molybdopterin cofactor catabolic process + 0
            nitrile catabolic process + 0
            non-proteinogenic amino acid catabolic process + 16
            nucleobase catabolic process + 7
            nucleoside catabolic process + 23
            peptide antibiotic catabolic process + 0
            phosphatidylcholine catabolic process + 14
            platelet activating factor catabolic process 2
            primary amino compound catabolic process + 1
            protein catabolic process + 967
            proteinogenic amino acid catabolic process + 64
            pteridine-containing compound catabolic process + 5
            purine-containing compound catabolic process + 155
            pyochelin catabolic process 0
            pyoverdine catabolic process 0
            pyridine-containing compound catabolic process + 104
            pyrimidine-containing compound catabolic process + 25
            s-triazine compound catabolic process + 0
            sphingolipid catabolic process + 32
            substance P catabolic process 3
            sulfur amino acid catabolic process + 7
            taurine catabolic process 0
            tensidol A catabolic process 0
            tetrapyrrole catabolic process + 6
            urea catabolic process + 0
paths to the root