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ONTOLOGY REPORT - ANNOTATIONS


Term:changes to DNA methylation involved in embryo development
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Accession:GO:1901538 term browser browse the term
Definition:The addition or removal of methyl groups to DNA that contributes to the epigenetic regulation of embryonic gene expression.
Synonyms:exact_synonym: DNA methylation or demethylation involved in embryogenesis;   DNA methylation or demethylation involved in embryonal development;   changes in DNA methylation involved in embryo development;   changes in DNA methylation involved in embryogenesis
 related_synonym: changes in DNA methylation involved in embryonal development


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DNA demethylation of male pronucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stpg4 sperm-tail PG-rich repeat containing 4 involved_in ISO (MGI:5762940|PMID:23560077) UniProt PMID:23560077 MGI:5762940 NCBI chrNW_004936508:5,229,734...5,267,094 JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 involved_in ISO (MGI:5289702|PMID:21892189), (MGI:5432962|PMID:22722204), (MGI:5465527|PMID:21407207) UniProt PMID:21407207 PMID:21892189 PMID:22722204 MGI:5289702 MGI:5432962 MGI:5465527 NCBI chrNW_004936556:292,551...391,644 JBrowse link
DNA methylation involved in embryo development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (MGI:6270117|PMID:29117290)
(MGI:6151717|PMID:27841881)
(MGI:49689|PMID:1606615)
MGI PMID:1606615 PMID:27841881 PMID:29117290 MGI:49689 MGI:6151717 MGI:6270117 NCBI chrNW_004936659:520,181...565,496 JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within
involved_in
ISO (MGI:1347183|PMID:10555141)
(MGI:6151717|PMID:27841881)
(MGI:3045942|PMID:15215868)
(MGI:5014027|PMID:20385583)
MGI
UniProt
PMID:10555141 PMID:15215868 PMID:20385583 PMID:27841881 MGI:1347183 MGI:3045942 MGI:5014027 MGI:6151717 NCBI chrNW_004936493:6,963,406...7,013,256 JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (MGI:1347183|PMID:10555141)
(MGI:6151717|PMID:27841881)
(PMID:18814855)
MGI
UniProt
PMID:10555141 PMID:18814855 PMID:27841881 MGI:1347183 MGI:6151717 NCBI chrNW_004936485:19,547,836...19,570,716 JBrowse link
G Trim28 tripartite motif containing 28 acts_upstream_of_or_within ISO (MGI:5319411|PMID:22495301) MGI PMID:22495301 MGI:5319411 NCBI chrNW_004937062:126,832...132,938 JBrowse link
G Zdbf2 zinc finger DBF-type containing 2 acts_upstream_of_or_within ISO (MGI:6151717|PMID:27841881) MGI PMID:27841881 MGI:6151717 NCBI chrNW_004936631:2,649,792...2,686,430 JBrowse link
G Zfp57 ZFP57 zinc finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:18622393)
(MGI:6506156|PMID:33500348)
(MGI:3826319|PMID:18854139)
UniProt
MGI
PMID:18622393 PMID:18854139 PMID:33500348 MGI:3826319 MGI:6506156 NCBI chrNW_004936723:1,063,969...1,069,986 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12168
    multicellular organismal process 6322
      multicellular organism development 4910
        embryo development 1189
          changes to DNA methylation involved in embryo development 8
            DNA methylation involved in embryo development + 8
Path 2
Term Annotations click to browse term
  biological_process 12168
    metabolic process 7642
      cellular metabolic process 7020
        cellular nitrogen compound metabolic process 4146
          nucleobase-containing compound metabolic process 3626
            nucleic acid metabolic process 3326
              DNA metabolic process 669
                DNA modification 95
                  DNA methylation or demethylation 84
                    changes to DNA methylation involved in embryo development 8
                      DNA methylation involved in embryo development + 8
paths to the root