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ONTOLOGY REPORT - ANNOTATIONS


Term:changes to DNA methylation involved in embryo development
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Accession:GO:1901538 term browser browse the term
Definition:The addition or removal of methyl groups to DNA that contributes to the epigenetic regulation of embryonic gene expression.
Synonyms:exact_synonym: DNA methylation or demethylation involved in embryogenesis;   DNA methylation or demethylation involved in embryonal development;   changes in DNA methylation involved in embryo development;   changes in DNA methylation involved in embryogenesis
 related_synonym: changes in DNA methylation involved in embryonal development


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DNA demethylation of male pronucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STPG4 sperm-tail PG-rich repeat containing 4 involved_in IBA
ISS
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr 2:47,086,991...47,155,308
Ensembl chr 2:47,045,538...47,155,308
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:73,982,036...74,135,394
Ensembl chr 2:73,984,910...74,108,176
JBrowse link
DNA methylation involved in embryo development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNMT1 DNA methyltransferase 1 acts_upstream_of_or_within
involved_in
acts_upstream_of_or_within_positive_effect
ISO
IEA
(MGI:49689|PMID:1606615)
(MGI:6270117|PMID:29117290)
MGI
Ensembl
PMID:1606615 PMID:29117290 GO_REF:0000107 MGI:49689 MGI:6270117 NCBI chr19:10,133,346...10,194,953
Ensembl chr19:10,133,342...10,231,286
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5014027|PMID:20385583)
(MGI:1347183|PMID:10555141)
Ensembl
MGI
PMID:10555141 PMID:20385583 GO_REF:0000107 MGI:1347183 MGI:5014027 NCBI chr 2:25,227,874...25,342,590
Ensembl chr 2:25,227,855...25,342,590
JBrowse link
G DNMT3B DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (MGI:1347183|PMID:10555141)
(PMID:18814855)
MGI
UniProt
PMID:10555141 PMID:18814855 MGI:1347183 NCBI chr20:32,762,385...32,809,356
Ensembl chr20:32,762,385...32,809,356
JBrowse link
G PICK1 protein interacting with PRKCA 1 involved_in NAS (PMID:12138111) UniProt PMID:12138111 NCBI chr22:38,056,311...38,075,704
Ensembl chr22:38,056,311...38,075,701
JBrowse link
G TRIM28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5319411|PMID:22495301) Ensembl
MGI
PMID:22495301 GO_REF:0000107 MGI:5319411 NCBI chr19:58,544,064...58,550,722
Ensembl chr19:58,544,064...58,550,722
JBrowse link
G ZFP57 ZFP57 zinc finger protein involved_in IMP (PMID:18622393) UniProt PMID:18622393 NCBI chr 6:29,672,392...29,681,152
Ensembl chr 6:29,672,483...29,681,155
JBrowse link
protection of DNA demethylation of female pronucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPPA3 developmental pluripotency associated 3 involved_in IBA
ISS
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr12:7,711,433...7,717,559
Ensembl chr12:7,711,433...7,717,559
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18534
    multicellular organismal process 8416
      multicellular organism development 5913
        embryo development 1332
          changes to DNA methylation involved in embryo development 9
            DNA methylation involved in embryo development + 9
Path 2
Term Annotations click to browse term
  biological_process 18534
    metabolic process 11862
      cellular metabolic process 10839
        cellular nitrogen compound metabolic process 6653
          nucleobase-containing compound metabolic process 5812
            nucleic acid metabolic process 5309
              DNA metabolic process 963
                DNA modification 132
                  DNA methylation or demethylation 110
                    changes to DNA methylation involved in embryo development 9
                      DNA methylation involved in embryo development + 9
paths to the root