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ONTOLOGY REPORT - ANNOTATIONS


Term:changes to DNA methylation involved in embryo development
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Accession:GO:1901538 term browser browse the term
Definition:The addition or removal of methyl groups to DNA that contributes to the epigenetic regulation of embryonic gene expression.
Synonyms:exact_synonym: DNA methylation or demethylation involved in embryogenesis;   DNA methylation or demethylation involved in embryonal development;   changes in DNA methylation involved in embryo development;   changes in DNA methylation involved in embryogenesis
 related_synonym: changes in DNA methylation involved in embryonal development


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DNA demethylation of male pronucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STPG4 sperm-tail PG-rich repeat containing 4 involved_in ISO (MGI:5762940|PMID:23560077) UniProt PMID:23560077 MGI:5762940 NCBI chr10:49,255,715...49,294,752
Ensembl chr10:49,255,723...49,294,708
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:48,976,510...49,083,454
Ensembl chr17:48,981,558...49,082,675
JBrowse link
DNA methylation involved in embryo development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNMT1 DNA methyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (MGI:6270117|PMID:29117290)
(MGI:49689|PMID:1606615)
MGI PMID:1606615 PMID:29117290 MGI:49689 MGI:6270117 NCBI chr20:50,872,213...50,928,352
Ensembl chr20:50,879,527...50,928,029
JBrowse link
G DNMT3A DNA methyltransferase 3 alpha acts_upstream_of_or_within
involved_in
ISO (MGI:1347183|PMID:10555141)
(MGI:3045942|PMID:15215868)
(MGI:5014027|PMID:20385583)
MGI
UniProt
PMID:10555141 PMID:15215868 PMID:20385583 MGI:1347183 MGI:3045942 MGI:5014027 NCBI chr17:19,489,524...19,563,074
Ensembl chr17:19,492,193...19,563,902
JBrowse link
G DNMT3B DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (MGI:1347183|PMID:10555141)
(PMID:18814855)
MGI
UniProt
PMID:10555141 PMID:18814855 MGI:1347183 NCBI chr24:22,096,386...22,123,378
Ensembl chr24:22,096,349...22,122,900
JBrowse link
G TRIM28 tripartite motif containing 28 acts_upstream_of_or_within ISO (MGI:5319411|PMID:22495301) MGI PMID:22495301 MGI:5319411 NCBI chr 1:99,408,920...99,415,432
Ensembl chr 1:99,408,925...99,415,146
JBrowse link
G ZFP57 ZFP57 zinc finger protein involved_in ISO (PMID:18622393)
(MGI:3826319|PMID:18854139)
UniProt PMID:18622393 PMID:18854139 MGI:3826319 NCBI chr35:26,267,358...26,269,429 JBrowse link
protection of DNA demethylation of female pronucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPPA3 developmental pluripotency associated 3 involved_in ISO (MGI:5432962|PMID:22722204), (MGI:5447615|PMID:17143267), (MGI:5465527|PMID:21407207) UniProt PMID:17143267 PMID:21407207 PMID:22722204 MGI:5432962 MGI:5447615 MGI:5465527 NCBI chr27:37,114,192...37,196,434 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 13872
    multicellular organismal process 6832
      multicellular organism development 5207
        embryo development 1242
          changes to DNA methylation involved in embryo development 8
            DNA methylation involved in embryo development + 8
Path 2
Term Annotations click to browse term
  biological_process 13872
    metabolic process 8970
      cellular metabolic process 8181
        cellular nitrogen compound metabolic process 4874
          nucleobase-containing compound metabolic process 4213
            nucleic acid metabolic process 3852
              DNA metabolic process 736
                DNA modification 97
                  DNA methylation or demethylation 86
                    changes to DNA methylation involved in embryo development 8
                      DNA methylation involved in embryo development + 8
paths to the root