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ONTOLOGY REPORT - ANNOTATIONS


Term:changes to DNA methylation involved in embryo development
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Accession:GO:1901538 term browser browse the term
Definition:The addition or removal of methyl groups to DNA that contributes to the epigenetic regulation of embryonic gene expression.
Synonyms:exact_synonym: DNA methylation or demethylation involved in embryogenesis;   DNA methylation or demethylation involved in embryonal development;   changes in DNA methylation involved in embryo development;   changes in DNA methylation involved in embryogenesis
 related_synonym: changes in DNA methylation involved in embryonal development


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DNA demethylation of male pronucleus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stpg4 sperm-tail PG-rich repeat containing 4 involved_in ISO (MGI:5762940|PMID:23560077) UniProt PMID:23560077 MGI:5762940 NCBI chrNW_004955441:13,926,926...13,969,316
Ensembl chrNW_004955441:13,925,403...13,969,052
JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 involved_in ISO (MGI:5289702|PMID:21892189), (MGI:5432962|PMID:22722204), (MGI:5465527|PMID:21407207) UniProt PMID:21407207 PMID:21892189 PMID:22722204 MGI:5289702 MGI:5432962 MGI:5465527 NCBI chrNW_004955424:11,612,124...11,722,130
Ensembl chrNW_004955424:11,617,993...11,714,203
JBrowse link
DNA methylation involved in embryo development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt1 DNA methyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
ISO (MGI:49689|PMID:1606615)
(MGI:6270117|PMID:29117290)
MGI PMID:1606615 PMID:29117290 MGI:49689 MGI:6270117 NCBI chrNW_004955495:1,465,529...1,505,379
Ensembl chrNW_004955495:1,465,480...1,505,462
JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha acts_upstream_of_or_within
involved_in
ISO (MGI:5014027|PMID:20385583)
(MGI:3045942|PMID:15215868)
(MGI:1347183|PMID:10555141)
MGI
UniProt
PMID:10555141 PMID:15215868 PMID:20385583 MGI:1347183 MGI:3045942 MGI:5014027 NCBI chrNW_004955469:7,264,431...7,367,059
Ensembl chrNW_004955469:7,269,952...7,367,059
JBrowse link
G Dnmt3b DNA methyltransferase 3 beta acts_upstream_of_or_within ISO (MGI:1347183|PMID:10555141)
(PMID:18814855)
MGI
UniProt
PMID:10555141 PMID:18814855 MGI:1347183 NCBI chrNW_004955422:28,380,595...28,427,012
Ensembl chrNW_004955422:28,380,591...28,421,301
JBrowse link
G Trim28 tripartite motif containing 28 acts_upstream_of_or_within ISO (MGI:5319411|PMID:22495301) MGI PMID:22495301 MGI:5319411 NCBI chrNW_004955584:1,148,903...1,156,001 JBrowse link
G Zfp57 ZFP57 zinc finger protein involved_in ISO (PMID:18622393)
(MGI:3826319|PMID:18854139)
UniProt PMID:18622393 PMID:18854139 MGI:3826319 NCBI chrNW_004955583:151,338...154,827 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11974
    multicellular organismal process 6234
      multicellular organism development 4860
        embryo development 1176
          changes to DNA methylation involved in embryo development 7
            DNA methylation involved in embryo development + 7
Path 2
Term Annotations click to browse term
  biological_process 11974
    metabolic process 7556
      cellular metabolic process 6954
        cellular nitrogen compound metabolic process 4097
          nucleobase-containing compound metabolic process 3592
            nucleic acid metabolic process 3295
              DNA metabolic process 661
                DNA modification 92
                  DNA methylation or demethylation 81
                    changes to DNA methylation involved in embryo development 7
                      DNA methylation involved in embryo development + 7
paths to the root