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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of transcription from RNA polymerase II promoter involved in heart development
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Accession:GO:1901213 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the development of the heart over time.
Synonyms:exact_synonym: regulation of transcription from Pol II promoter involved in heart development
 narrow_synonym: regulation of transcription from Pol II promoter involved in dorsal vessel development;   regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development
 related_synonym: global transcription regulation from Pol II promoter involved in cardiac development;   global transcription regulation from Pol II promoter involved in dorsal vessel development;   global transcription regulation from Pol II promoter involved in heart development;   regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development;   regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development;   regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development;   regulation of global transcription from Pol II promoter involved in cardiac development;   regulation of global transcription from Pol II promoter involved in dorsal vessel development;   regulation of global transcription from Pol II promoter involved in heart development;   regulation of transcription from Pol II promoter involved in cardiac development;   regulation of transcription from RNA polymerase II promoter involved in cardiac development;   regulation of transcription from RNA polymerase II promoter, global involved in cardiac development;   regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development;   regulation of transcription from RNA polymerase II promoter, global involved in heart development


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negative regulation of transcription from RNA polymerase II promoter involved in heart development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:2,458,283...2,470,674
Ensembl chr 7:2,458,264...2,470,674
JBrowse link
positive regulation of transcription from RNA polymerase II promoter involved in heart development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gata5 GATA binding protein 5 involved_in ISO (MGI:5286818|PMID:21633169) RGD PMID:21633169 MGI:5286818 NCBI chr 3:175,701,278...175,709,465
Ensembl chr 3:175,701,280...175,709,465
JBrowse link
G Myocd myocardin involved_in ISO (MGI:5519155|PMID:24068960) RGD PMID:24068960 MGI:5519155 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Naca nascent polypeptide associated complex subunit alpha involved_in ISO (MGI:4867362|PMID:21071677) RGD PMID:21071677 MGI:4867362 NCBI chr 7:2,458,283...2,470,674
Ensembl chr 7:2,458,264...2,470,674
JBrowse link
positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (MGI:5315691|PMID:18545679) RGD PMID:18545679 MGI:5315691 NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
JBrowse link
G Myocd myocardin involved_in ISO
IEA
(PMID:15907818)
GO_REF:0000107
RGD
Ensembl
PMID:15907818 GO_REF:0000107 NCBI chr10:51,682,053...51,781,458
Ensembl chr10:51,683,540...51,778,986
JBrowse link
G Srf serum response factor involved_in ISO UniProtKB:Q9JM73 (PMID:19783823)
(MGI:5009475|PMID:19783823)
RGD PMID:19783823 MGI:5009475 NCBI chr 9:16,737,637...16,747,226
Ensembl chr 9:16,737,642...16,747,225
JBrowse link
G Tbxt T-box transcription factor T involved_in ISO (PMID:21632880)
(MGI:5307952|PMID:21632880)
RGD PMID:21632880 MGI:5307952 NCBI chr 1:52,887,067...52,900,691
Ensembl chr 1:52,887,067...52,894,832
JBrowse link
regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Notch1 notch receptor 1 involved_in ISO (MGI:4947514|PMID:20007915) RGD PMID:20007915 MGI:4947514 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (MGI:5298073|PMID:21311046) RGD PMID:21311046 MGI:5298073 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Tbx2 T-box transcription factor 2 involved_in ISO (MGI:3487212|PMID:15459098) RGD PMID:15459098 MGI:3487212 NCBI chr10:73,278,932...73,290,764
Ensembl chr10:73,279,119...73,289,921
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19633
    developmental process 6782
      anatomical structure development 6259
        animal organ development 4049
          heart development 690
            regulation of transcription from RNA polymerase II promoter involved in heart development 9
              negative regulation of transcription from RNA polymerase II promoter involved in heart development 1
              positive regulation of transcription from RNA polymerase II promoter involved in heart development + 6
              regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation 0
              regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation + 7
Path 2
Term Annotations click to browse term
  biological_process 19633
    metabolic process 11911
      cellular metabolic process 10866
        cellular aromatic compound metabolic process 5616
          nucleobase-containing compound metabolic process 5404
            nucleic acid metabolic process 4915
              RNA metabolic process 4400
                RNA biosynthetic process 3419
                  nucleic acid-templated transcription 3404
                    transcription, DNA-templated 3402
                      regulation of transcription, DNA-templated 3271
                        regulation of transcription by RNA polymerase II 2387
                          regulation of transcription from RNA polymerase II promoter involved in heart development 9
                            negative regulation of transcription from RNA polymerase II promoter involved in heart development 1
                            positive regulation of transcription from RNA polymerase II promoter involved in heart development + 6
                            regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation 0
                            regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation + 7
paths to the root