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ONTOLOGY REPORT - ANNOTATIONS

Term:primary amino compound metabolic process
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Accession:GO:1901160 term browser browse the term
Definition:The chemical reactions and pathways involving primary amino compound.
Synonyms:exact_synonym: primary amino compound metabolism


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ethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHKA choline kinase alpha ISO RGD PMID:1577786 RGD:61551 NCBI chr18:49,717,512...49,784,653
Ensembl chr18:49,745,437...49,781,882 		JBrowse link
G GDE1 glycerophosphodiester phosphodiesterase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:25,740,741...25,765,404
Ensembl chr 6:25,740,765...25,758,489 		JBrowse link
phenylethylamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAOB monoamine oxidase B ISO RGD PMID:18539264 RGD:2316732 NCBI chr  X:37,765,810...37,883,955
Ensembl chr  X:37,765,813...37,883,955 		JBrowse link
phenylethylamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAOA monoamine oxidase A ISO RGD PMID:11754741 RGD:1600709 NCBI chr  X:37,678,933...37,744,757
Ensembl chr  X:37,677,493...37,744,757 		JBrowse link
regulation of serotonin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH2 aldehyde dehydrogenase 2 family member involved_in ISO (MGI:6827320|PMID:26711020) UniProt PMID:26711020 MGI:6827320 NCBI chr26:9,319,109...9,361,021 JBrowse link
serotonin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDC dopa decarboxylase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:10027744 GO_REF:0000118 RGD:5129182 NCBI chr18:1,802,239...1,876,714
Ensembl chr18:1,803,273...1,867,616 		JBrowse link
G TPH1 tryptophan hydroxylase 1 involved_in IEA UniProt
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr21:40,545,379...40,571,620
Ensembl chr21:40,547,682...40,566,572 		JBrowse link
G TPH2 tryptophan hydroxylase 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr10:13,442,611...13,526,537
Ensembl chr10:13,442,611...13,527,243 		JBrowse link
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2D15 cytochrome P450 family 2 subfamily D member 15 ISO RGD PMID:23098818 RGD:11353778 NCBI chr10:23,255,259...23,259,380
Ensembl chr10:23,255,249...23,259,298 		JBrowse link
serotonin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:2765934) MGI PMID:2765934 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8174230) MGI PMID:8174230 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869 		JBrowse link
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22678064) Ensembl
MGI		 PMID:22678064 GO_REF:0000107 NCBI chr12:7,154,805...7,564,050
Ensembl chr12:7,154,925...7,564,017 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11160454) Ensembl
MGI		 PMID:11160454 GO_REF:0000107 NCBI chr 6:32,132,070...32,678,319
Ensembl chr 6:32,303,121...32,668,960 		JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:50,005,277...50,006,548
Ensembl chr 2:50,002,740...50,006,548 		JBrowse link
G MAOA monoamine oxidase A ISO Y402A, Y407A, Y410A had an impact on the properties of the protein while Y402F, Y410F had little effect; the residues are near the C406 FAD binding site RGD PMID:11263670 PMID:11754741 RGD:1600709 RGD:1600713 NCBI chr  X:37,678,933...37,744,757
Ensembl chr  X:37,677,493...37,744,757 		JBrowse link
G PDE1B phosphodiesterase 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17559891) Ensembl
MGI		 PMID:17559891 GO_REF:0000107 NCBI chr27:772,741...800,967
Ensembl chr27:772,056...800,375 		JBrowse link
G RNF180 ring finger protein 180 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23926250) Ensembl
TreeGrafter
MGI		 PMID:23926250 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:50,166,987...50,353,694
Ensembl chr 2:50,197,137...50,352,946 		JBrowse link
G SPR sepiapterin reductase acts_upstream_of_or_within ISO (PMID:16532389) MGI PMID:16532389 NCBI chr17:49,950,192...49,957,455
Ensembl chr17:49,950,800...49,957,417 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:15936112 RGD:4891926 NCBI chr34:7,118,814...7,144,828
Ensembl chr34:7,118,814...7,144,828 		JBrowse link
Term paths to the root