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ONTOLOGY REPORT - ANNOTATIONS

Term:primary amino compound metabolic process
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Accession:GO:1901160 term browser browse the term
Definition:The chemical reactions and pathways involving primary amino compound.
Synonyms:exact_synonym: primary amino compound metabolism


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ethanolamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHKA choline kinase alpha ISO RGD PMID:1577786 RGD:61551 NCBI chr11:63,134,776...63,202,516
Ensembl chr11:66,444,406...66,510,221 		JBrowse link
G GDE1 glycerophosphodiester phosphodiesterase 1 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr16:18,789,681...18,809,783
Ensembl chr16:19,602,611...19,623,041 		JBrowse link
phenylethylamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAOB monoamine oxidase B ISO RGD PMID:18539264 RGD:2316732 NCBI chr  X:36,217,710...36,333,516
Ensembl chr  X:44,042,000...44,157,941 		JBrowse link
phenylethylamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MAOA monoamine oxidase A ISO Y402A, Y407A, Y410A had an impact on the properties of the protein while Y402F, Y410F had little effect; the residues are near the C406 FAD binding site RGD PMID:11754741 RGD:1600709 NCBI chr  X:36,106,680...36,197,907
Ensembl chr  X:43,931,044...44,022,199 		JBrowse link
regulation of serotonin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH2 aldehyde dehydrogenase 2 family member involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:109,343,020...109,385,060
Ensembl chr12:112,734,243...112,776,471 		JBrowse link
serotonin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDC dopa decarboxylase involved_in ISO
IEA		 RGD
TreeGrafter		 PMID:10027744 GO_REF:0000118 RGD:5129182 NCBI chr 7:51,101,169...51,206,031
Ensembl chr 7:51,345,228...51,449,710 		JBrowse link
G TPH1 tryptophan hydroxylase 1 involved_in IEA UniProt
InterPro
Ensembl		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr11:18,070,576...18,099,539
Ensembl chr11:17,754,893...17,778,076 		JBrowse link
G TPH2 tryptophan hydroxylase 2 involved_in IEA InterPro
UniProt		 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr12:69,460,883...69,557,329
Ensembl chr12:72,318,908...72,412,557 		JBrowse link
serotonin biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100988273 cytochrome P450 2D6-like ISO RGD PMID:23098818 RGD:11353778 NCBI chr22:23,022,449...23,031,627 JBrowse link
serotonin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (PMID:2765934) MGI PMID:2765934 NCBI chr 3:10,260,556...10,643,346
Ensembl chr 3:10,611,619...10,738,006 		JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (PMID:8174230) MGI PMID:8174230 NCBI chr  X:67,093,675...67,231,318
Ensembl chr  X:77,255,312...77,342,756 		JBrowse link
G BTBD9 BTB domain containing 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22678064) Ensembl
MGI		 PMID:22678064 GO_REF:0000107 NCBI chr 6:37,733,575...38,211,857
Ensembl chr 6:38,928,879...39,358,424 		JBrowse link
G GRIN2A glutamate ionotropic receptor NMDA type subunit 2A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11160454) Ensembl
MGI		 PMID:11160454 GO_REF:0000107 NCBI chr16:8,682,169...9,105,581
Ensembl chr16:9,919,143...10,336,167 		JBrowse link
G HTR1A 5-hydroxytryptamine receptor 1A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:50,045,266...50,049,636
Ensembl chr 5:51,692,416...51,693,684 		JBrowse link
G MAOA monoamine oxidase A ISO Y402A, Y407A, Y410A had an impact on the properties of the protein while Y402F, Y410F had little effect; the residues are near the C406 FAD binding site RGD PMID:11263670 PMID:11754741 RGD:1600709 RGD:1600713 NCBI chr  X:36,106,680...36,197,907
Ensembl chr  X:43,931,044...44,022,199 		JBrowse link
G PDE1B phosphodiesterase 1B acts_upstream_of_or_within ISO (PMID:17559891) MGI PMID:17559891 NCBI chr12:34,167,801...34,198,049 JBrowse link
G RNF180 ring finger protein 180 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23926250) Ensembl
MGI
TreeGrafter		 PMID:23926250 GO_REF:0000107 GO_REF:0000118 NCBI chr 5:49,624,452...49,841,741
Ensembl chr 5:51,280,064...51,454,750 		JBrowse link
G SPR sepiapterin reductase acts_upstream_of_or_within ISO (PMID:16532389) MGI PMID:16532389 NCBI chr2A:72,939,621...72,944,669
Ensembl chr2A:74,433,056...74,438,105 		JBrowse link
G SRD5A1 steroid 5 alpha-reductase 1 ISO RGD PMID:15936112 RGD:4891926 NCBI chr 5:6,953,795...6,996,010
Ensembl chr 5:6,629,093...6,664,264 		JBrowse link
Term paths to the root