Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:xylulose 5-phosphate biosynthetic process
go back to main search page
Accession:GO:1901159 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of xylulose 5-phosphate.
Synonyms:exact_synonym: xylulose 5-phosphate anabolism;   xylulose 5-phosphate biosynthesis;   xylulose 5-phosphate formation;   xylulose 5-phosphate synthesis

GViewer not supported for the selected species.

show annotations for term's descendants           Sort by:
xylulose 5-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tkt transketolase involved_in ISO (PMID:5360673) MGI PMID:5360673 NCBI chrNW_004624822:3,989,292...4,014,150
Ensembl chrNW_004624822:3,989,299...4,014,269 		JBrowse link
D-glucuronate catabolic process to D-xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624906:1,463,201...1,474,001
Ensembl chrNW_004624906:1,462,693...1,474,214 		JBrowse link
G Cryl1 crystallin lambda 1 involved_in ISO (PMID:38160) MGI PMID:38160 NCBI chrNW_004624776:17,127,362...17,312,271
Ensembl chrNW_004624776:17,127,002...17,312,348 		JBrowse link
G Dcxr dicarbonyl and L-xylulose reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624801:10,866,264...10,868,064
Ensembl chrNW_004624801:10,865,219...10,868,060 		JBrowse link
G Sord sorbitol dehydrogenase involved_in ISO (PMID:38160) MGI PMID:38160 NCBI chrNW_004624731:14,159,439...14,185,960
Ensembl chrNW_004624731:14,156,522...14,185,989 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15225
    metabolic process 9679
      carbohydrate derivative metabolic process 940
        xylulose 5-phosphate metabolic process 5
          xylulose 5-phosphate biosynthetic process 5
            D-arabinose catabolic process to xylulose 5-phosphate 0
            D-arabitol catabolic process to xylulose 5-phosphate 0
            D-glucuronate catabolic process to D-xylulose 5-phosphate 4
            L-arabinose catabolic process to xylulose 5-phosphate 0
            L-arabitol catabolic process to xylulose 5-phosphate 0
            L-xylitol catabolic process to xylulose 5-phosphate 0
            ribitol catabolic process to xylulose 5-phosphate 0
Path 2
Term Annotations click to browse term
  biological_process 15225
    metabolic process 9679
      cellular metabolic process 8101
        phosphorus metabolic process 2445
          organophosphate metabolic process 889
            xylulose 5-phosphate metabolic process 5
              xylulose 5-phosphate biosynthetic process 5
                D-arabinose catabolic process to xylulose 5-phosphate 0
                D-arabitol catabolic process to xylulose 5-phosphate 0
                D-glucuronate catabolic process to D-xylulose 5-phosphate 4
                L-arabinose catabolic process to xylulose 5-phosphate 0
                L-arabitol catabolic process to xylulose 5-phosphate 0
                L-xylitol catabolic process to xylulose 5-phosphate 0
                ribitol catabolic process to xylulose 5-phosphate 0
paths to the root