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ONTOLOGY REPORT - ANNOTATIONS


Term:carbohydrate derivative biosynthetic process
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Accession:GO:1901137 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of carbohydrate derivative.
Synonyms:exact_synonym: carbohydrate derivative anabolism;   carbohydrate derivative biosynthesis;   carbohydrate derivative formation;   carbohydrate derivative synthesis



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carbohydrate derivative biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HS6ST2 heparan sulfate 6-O-sulfotransferase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chr  X:103,529,705...103,816,049
Ensembl chr  X:103,531,378...103,815,538
JBrowse link
G HS6ST3 heparan sulfate 6-O-sulfotransferase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chr22:47,257,641...47,265,143
Ensembl chr22:47,117,757...47,259,351
JBrowse link
'de novo' AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in ISO (MGI:6718247|PMID:5891253)
(PMID:27590927)
(MGI:6718249|PMID:6480832)
MGI PMID:5891253 PMID:6480832 PMID:27590927 MGI:6718247 MGI:6718249 NCBI chr10:24,813,854...24,832,115 JBrowse link
G ADSS1 adenylosuccinate synthase 1 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 8:72,288,246...72,305,479
Ensembl chr 8:72,288,323...72,305,479
JBrowse link
G ADSS2 adenylosuccinate synthase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr 7:35,440,250...35,477,470
Ensembl chr 7:35,440,676...35,476,795
JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:22,420,645...22,446,769
Ensembl chr37:22,420,603...22,446,697
JBrowse link
G LOC100856570 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr31:28,133,546...28,165,595 JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 involved_in ISO (MGI:64690|PMID:8299947)
(PMID:2183217)
MGI PMID:2183217 PMID:8299947 MGI:64690 NCBI chr31:29,032,399...29,063,706 JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chr13:48,296,232...48,682,650 JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chr 5:33,055,144...33,076,823
Ensembl chr 5:33,060,929...33,076,287
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:48,618,460...48,656,164
Ensembl chr13:48,620,714...48,655,780
JBrowse link
'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 involved_in IEA UniProt
UniProt
GO_REF:0000041 GO_REF:0000104 NCBI chr15:2,067,767...2,093,014
Ensembl chr15:2,067,763...2,093,014
JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA UniProt
UniProt
GO_REF:0000041 GO_REF:0000104 NCBI chr  X:12,759,998...12,867,707
Ensembl chr  X:12,760,015...12,865,111
JBrowse link
'de novo' GDP-L-fucose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFUS GDP-L-fucose synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr13:37,267,119...37,272,101
Ensembl chr13:37,267,122...37,271,967
JBrowse link
G GMDS GDP-mannose 4,6-dehydratase involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr35:2,108,459...2,519,902
Ensembl chr35:2,151,528...2,519,513
JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in ISO (MGI:6718249|PMID:6480832) MGI PMID:6480832 MGI:6718249 NCBI chr10:24,813,854...24,832,115 JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IEA
IBA
ISO
(PMID:21873635) UniProt
GO_Central
RGD
PMID:9332377 PMID:21873635 GO_REF:0000041 RGD:70804 NCBI chr37:22,420,645...22,446,769
Ensembl chr37:22,420,603...22,446,697
JBrowse link
G LOC100856570 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA UniProt
Ensembl
UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr31:28,133,546...28,165,595 JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 involved_in IEA UniProt GO_REF:0000041 NCBI chr31:29,032,399...29,063,706 JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000041 NCBI chr13:48,296,232...48,682,650 JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 NCBI chr 5:33,055,144...33,076,823
Ensembl chr 5:33,060,929...33,076,287
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr13:48,618,460...48,656,164
Ensembl chr13:48,620,714...48,655,780
JBrowse link
'de novo' UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEA UniProt GO_REF:0000041 NCBI chr17:21,198,839...21,221,897
Ensembl chr17:21,197,826...21,221,635
JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:77,756,411...77,766,207
Ensembl chr 5:77,756,407...77,774,090
JBrowse link
G UMPS uridine monophosphate synthetase involved_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr33:27,754,592...27,782,517
Ensembl chr33:27,754,643...27,782,514
JBrowse link
'de novo' XMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in ISO (MGI:6718249|PMID:6480832) MGI PMID:6480832 MGI:6718249 NCBI chr10:24,813,854...24,832,115 JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:22,420,645...22,446,769
Ensembl chr37:22,420,603...22,446,697
JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 involved_in ISO (MGI:2675193|PMID:12944494) MGI PMID:12944494 MGI:2675193 NCBI chr14:8,001,575...8,013,181
Ensembl chr14:7,996,717...8,012,467
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr20:40,136,106...40,140,983
Ensembl chr20:40,136,154...40,140,972
JBrowse link
G LOC100856570 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr31:28,133,546...28,165,595 JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 involved_in ISO (MGI:64690|PMID:8299947)
(PMID:2183217)
MGI PMID:2183217 PMID:8299947 MGI:64690 NCBI chr31:29,032,399...29,063,706 JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chr13:48,296,232...48,682,650 JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chr 5:33,055,144...33,076,823
Ensembl chr 5:33,060,929...33,076,287
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:48,618,460...48,656,164
Ensembl chr13:48,620,714...48,655,780
JBrowse link
2'-deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr21:26,595,838...26,631,476
Ensembl chr21:26,595,914...26,631,135
JBrowse link
G RRM2 ribonucleotide reductase regulatory subunit M2 involved_in ISO (PMID:16376858)
(MGI:6810812|PMID:12578384)
ComplexPortal PMID:12578384 PMID:16376858 MGI:6810812 NCBI chr17:7,106,515...7,113,868
Ensembl chr17:7,104,961...7,122,939
JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:3,774,725...3,838,576
Ensembl chr13:3,799,025...3,837,934
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2448448|PMID:12414806)
GO_Central
MGI
PMID:12414806 PMID:21873635 MGI:2448448 NCBI chr32:28,136,741...28,235,529
Ensembl chr32:28,136,909...28,235,484
JBrowse link
G PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:37,725,205...37,745,103
Ensembl chr26:37,725,616...37,743,928
JBrowse link
5-phosphoribose 1-diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:9366267 PMID:21873635 GO_REF:0000041 RGD:5134981 NCBI chr  X:81,150,537...81,171,521
Ensembl chr  X:81,150,536...81,212,689
JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:9366267 PMID:21873635 GO_REF:0000041 RGD:5134981 NCBI chr  X:9,281,686...9,326,551
Ensembl chr  X:9,281,730...9,418,289
JBrowse link
G PRPSAP1 phosphoribosyl pyrophosphate synthetase associated protein 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:4,346,282...4,372,067
Ensembl chr 9:4,346,297...4,372,067
JBrowse link
G PRPSAP2 phosphoribosyl pyrophosphate synthetase associated protein 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:41,118,591...41,167,647
Ensembl chr 5:41,039,015...41,167,568
JBrowse link
G PYGL glycogen phosphorylase L ISO RGD PMID:15571236 RGD:1599376 NCBI chr 8:27,264,778...27,307,977
Ensembl chr 8:27,223,273...27,307,977
JBrowse link
G SLC5A10 solute carrier family 5 member 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:41,038,968...41,095,463
Ensembl chr 5:41,039,015...41,167,568
JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,361,301...24,379,807
Ensembl chr 5:24,361,301...24,379,812
JBrowse link
G ACLY ATP citrate lyase involved_in IEA
IBA
(PMID:21873635) InterPro
Ensembl
InterPro
Ensembl
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:20,929,530...20,974,200
Ensembl chr 9:20,929,614...20,973,663
JBrowse link
G ACSS1 acyl-CoA synthetase short chain family member 1 acts_upstream_of_or_within
involved_in
ISO (MGI:2151932|PMID:11150295)
(PMID:16788062)
MGI
UniProt
PMID:11150295 PMID:16788062 MGI:2151932 NCBI chr23:1,192,771...1,251,724
Ensembl chr23:1,184,392...1,252,255
JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2151932|PMID:11150295) MGI
Ensembl
PMID:11150295 GO_REF:0000107 MGI:2151932 NCBI chr24:23,928,800...23,973,383
Ensembl chr24:23,928,838...23,972,651
JBrowse link
G DIP2A disco interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) UniProt PMID:30672040 MGI:6478983 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484
JBrowse link
G MLYCD malonyl-CoA decarboxylase involved_in ISO
IEA
IBA
(PMID:21873635) RGD
Ensembl
GO_Central
PMID:17316539 PMID:21873635 GO_REF:0000107 RGD:1600790 NCBI chr 5:68,385,058...68,399,965
Ensembl chr 5:68,384,618...68,399,965
JBrowse link
G PPCS phosphopantothenoylcysteine synthetase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr15:813,435...817,732
Ensembl chr15:813,870...816,825
JBrowse link
acetyl-CoA biosynthetic process from acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSS1 acyl-CoA synthetase short chain family member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr23:1,192,771...1,251,724
Ensembl chr23:1,184,392...1,252,255
JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLAT dihydrolipoamide S-acetyltransferase involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
InterPro
Ensembl
RGD
PMID:7487891 PMID:21873635 GO_REF:0000002 GO_REF:0000107 RGD:1599112 NCBI chr 5:21,062,833...21,094,235
Ensembl chr 5:21,064,026...21,094,153
JBrowse link
G DLD dihydrolipoamide dehydrogenase involved_in ISO (PMID:24534072) RGD
ComplexPortal
PMID:7487891 PMID:24534072 RGD:1599112 NCBI chr18:12,703,340...12,734,408
Ensembl chr18:12,703,341...12,734,479
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in ISS
IEA
ISO
UniProt
UniProt
InterPro
RGD
PMID:7487891 GO_REF:0000002 GO_REF:0000024 RGD:1599112 NCBI chr  X:15,338,364...15,354,011
Ensembl chr  X:15,338,202...15,387,458
JBrowse link
G PDHA2 pyruvate dehydrogenase E1 subunit alpha 2 ISO RGD PMID:7487891 RGD:1599112
G PDHB pyruvate dehydrogenase E1 subunit beta involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
InterPro
InterPro
RGD
PMID:7487891 PMID:21873635 GO_REF:0000002 RGD:1599112 NCBI chr20:32,185,420...32,191,592 JBrowse link
G PDHX pyruvate dehydrogenase complex component X involved_in IEA Ensembl
InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr18:32,947,883...33,011,845
Ensembl chr18:32,917,858...33,011,819
JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto acts_upstream_of_or_within ISO (MGI:3770326|PMID:16547283) MGI PMID:16547283 MGI:3770326 NCBI chr12:45,491,028...45,520,019
Ensembl chr12:45,491,733...45,518,405
JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 involved_in IEA
ISO
UniProt
UniProt
RGD
PMID:19049516 GO_REF:0000104 RGD:5134369 NCBI chr 9:55,539,179...55,548,132
Ensembl chr 9:55,539,260...55,548,132
JBrowse link
G AK2 adenylate kinase 2 involved_in IEA
ISO
UniProt
InterPro
UniProt
RGD
PMID:5123889 GO_REF:0000002 GO_REF:0000104 RGD:5490208 NCBI chr 2:68,342,769...68,371,769
Ensembl chr 2:68,350,057...68,371,090
JBrowse link
G AK3 adenylate kinase 3 involved_in IEA UniProt GO_REF:0000104 NCBI chr 1:93,086,617...93,095,023 JBrowse link
G DNAJC6 DnaJ heat shock protein family (Hsp40) member C6 involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:45,055,294...45,119,595
Ensembl chr 5:44,884,283...45,120,203
JBrowse link
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial involved_in IEA
ISO
UniProt
UniProt
RGD
PMID:5010295 PMID:5123889 GO_REF:0000104 RGD:5490208 RGD:5490216 NCBI chr 9:10,282,452...10,283,479 JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase acts_upstream_of_or_within ISO (MGI:55148|PMID:7323947) GOC PMID:7323947 MGI:55148 NCBI chr 4:24,540,626...25,047,032
Ensembl chr 4:24,540,659...25,046,464
JBrowse link
G ADSL adenylosuccinate lyase involved_in ISO (PMID:11428554) RGD
UniProt
PMID:3759987 PMID:11428554 RGD:5135303 NCBI chr10:24,813,854...24,832,115 JBrowse link
G ADSS1 adenylosuccinate synthase 1 involved_in ISO (PMID:15786719) UniProt PMID:15786719 NCBI chr 8:72,288,246...72,305,479
Ensembl chr 8:72,288,323...72,305,479
JBrowse link
G ADSS2 adenylosuccinate synthase 2 acts_upstream_of_or_within
involved_in
ISO (MGI:64874|PMID:8308018)
(PMID:2004783)
MGI
UniProt
PMID:2004783 PMID:8308018 MGI:64874 NCBI chr 7:35,440,250...35,477,470
Ensembl chr 7:35,440,676...35,476,795
JBrowse link
G NUDT2 nudix hydrolase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:51,049,992...51,064,317
Ensembl chr11:51,050,053...51,064,178
JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:81,150,537...81,171,521
Ensembl chr  X:81,150,536...81,212,689
JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:9,281,686...9,326,551
Ensembl chr  X:9,281,730...9,418,289
JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:66,381,215...66,508,559
Ensembl chr12:66,389,190...66,500,273
JBrowse link
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial ISO RGD PMID:5484813 RGD:2301093 NCBI chr 9:10,282,452...10,283,479 JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADK adenosine kinase involved_in IEA UniProt
UniProt
Ensembl
GO_REF:0000041 GO_REF:0000104 GO_REF:0000107 NCBI chr 4:24,540,626...25,047,032
Ensembl chr 4:24,540,659...25,046,464
JBrowse link
G ADSL adenylosuccinate lyase involved_in ISO (MGI:6751570|PMID:25681585) MGI PMID:25681585 MGI:6751570 NCBI chr10:24,813,854...24,832,115 JBrowse link
G ADSS1 adenylosuccinate synthase 1 involved_in ISO (MGI:6751570|PMID:25681585) MGI PMID:25681585 MGI:6751570 NCBI chr 8:72,288,246...72,305,479
Ensembl chr 8:72,288,323...72,305,479
JBrowse link
G APRT adenine phosphoribosyltransferase involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:21873635)
(MGI:85816|PMID:8864750)
UniProt
Ensembl
GO_Central
MGI
PMID:8864750 PMID:21873635 GO_REF:0000041 GO_REF:0000107 MGI:85816 NCBI chr 5:64,563,154...64,565,537
Ensembl chr 5:64,563,192...64,565,445
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (MGI:1331314|PMID:10037486), (MGI:6478860|PMID:8064675), (MGI:6751570|PMID:25681585) MGI PMID:8064675 PMID:10037486 PMID:25681585 MGI:1331314 MGI:6478860 MGI:6751570 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
amylopectin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC2A4 solute carrier family 2 member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3042070|PMID:14562105) Ensembl
MGI
PMID:14562105 GO_REF:0000107 MGI:3042070 NCBI chr 5:32,238,095...32,244,022
Ensembl chr 5:32,238,095...32,244,021
JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOA aldolase, fructose-bisphosphate A involved_in ISO (PMID:14615364) BHF-UCL PMID:14615364 NCBI chr 6:18,077,241...18,083,053 JBrowse link
G ATP5F1A ATP synthase F1 subunit alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 7:45,118,188...45,127,048
Ensembl chr 7:45,117,657...45,127,048
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr10:870,405...876,937
Ensembl chr10:870,392...909,161
JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:28,306,857...28,325,149
Ensembl chr 2:28,306,857...28,325,116
JBrowse link
G ATP5J2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:10,128,623...10,172,377 JBrowse link
G ATP5MC1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chr 9:25,123,194...25,125,959
Ensembl chr 9:25,123,241...25,127,909
JBrowse link
G ATP5ME ATP synthase membrane subunit e involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:108,285,208...108,285,423 JBrowse link
G ATP5MG ATP synthase membrane subunit g involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:15,329,060...15,336,344 JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP involved_in ISO
IEA
RGD
UniProt
PMID:7864899 GO_REF:0000043 RGD:14696824 NCBI chr31:28,472,106...28,481,759 JBrowse link
G B9D2 B9 domain containing 2 involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G DGUOK deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chr17:49,107,085...49,139,366
Ensembl chr17:49,104,546...49,168,782
JBrowse link
G LDHC lactate dehydrogenase C acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3775056|PMID:18367675) MGI
Ensembl
Ensembl
PMID:18367675 GO_REF:0000107 MGI:3775056 NCBI chr21:40,844,644...40,890,407
Ensembl chr21:40,844,662...40,890,398
JBrowse link
G LOC102151856 ATP synthase subunit f, mitochondrial involved_in IEA UniProt GO_REF:0000043 NCBI chr15:49,438,852...49,439,253 JBrowse link
G MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 involved_in IEA UniProt GO_REF:0000043 NCBI chr MT:7,964...8,644
Ensembl chr MT:7,964...8,644
JBrowse link
G MT-ATP8 mitochondrially encoded ATP synthase membrane subunit 8 involved_in IEA UniProt GO_REF:0000043 NCBI chr MT:7,803...8,006
Ensembl chr MT:7,803...8,006
JBrowse link
G NUDT2 nudix hydrolase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:51,049,992...51,064,317
Ensembl chr11:51,050,053...51,064,178
JBrowse link
G PKLR pyruvate kinase L/R ISO RGD PMID:4273555 PMID:5492954 RGD:2302789 RGD:2302790 NCBI chr 7:42,263,899...42,272,770
Ensembl chr 7:42,263,761...42,272,755
JBrowse link
G PKM pyruvate kinase M1/2 ISO RGD PMID:4273555 RGD:2302790 NCBI chr30:35,712,853...35,737,643 JBrowse link
G SLC25A13 solute carrier family 25 member 13 involved_in ISO (PMID:12851387) UniProt PMID:12851387 NCBI chr14:21,295,651...21,481,767
Ensembl chr14:21,296,512...21,482,236
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS AgBase
UniProt
GO_REF:0000024 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
attachment of GPI anchor to protein term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPAA1 glycosylphosphatidylinositol anchor attachment 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:37,577,162...37,580,346
Ensembl chr13:37,576,354...37,580,345
JBrowse link
G PIGK phosphatidylinositol glycan anchor biosynthesis class K involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 6:69,572,985...69,682,017
Ensembl chr 6:69,573,020...69,680,477
JBrowse link
G PIGS phosphatidylinositol glycan anchor biosynthesis class S involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 9:42,761,772...42,776,768
Ensembl chr 9:42,761,665...42,776,676
JBrowse link
G PIGT phosphatidylinositol glycan anchor biosynthesis class T involved_in IEA
IBA
(PMID:21873635) Ensembl
InterPro
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr24:32,706,476...32,715,169
Ensembl chr24:32,706,028...32,715,168
JBrowse link
G PIGU phosphatidylinositol glycan anchor biosynthesis class U involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr24:23,674,133...23,768,119
Ensembl chr24:23,674,137...23,768,073
JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in ISO
IEA
IBA
(PMID:21873635) RGD
UniProt
GO_Central
PMID:14985420 PMID:21873635 GO_REF:0000043 RGD:2312640 NCBI chr16:1,064,644...1,166,864
Ensembl chr16:1,037,162...1,167,094
JBrowse link
G ADCY10 adenylate cyclase 10 involved_in ISO (PMID:12609998), (PMID:15659711) RGD
UniProt
PMID:7225326 PMID:9874775 PMID:12609998 PMID:15659711 PMID:16627466 More... RGD:1299450 RGD:2313171 RGD:2313173 RGD:2313177 NCBI chr 7:30,576,445...30,660,926
Ensembl chr 7:30,577,591...30,660,926
JBrowse link
G ADCY2 adenylate cyclase 2 involved_in ISO
IEA
RGD
UniProt
PMID:11738086 PMID:12711600 GO_REF:0000043 RGD:2312641 RGD:2312674 NCBI chr34:6,139,931...6,527,677
Ensembl chr34:6,140,276...6,527,677
JBrowse link
G ADCY3 adenylate cyclase 3 involved_in ISO
IBA
(PMID:21873635) RGD
GO_Central
PMID:12711600 PMID:21873635 RGD:2312674 NCBI chr17:19,153,732...19,231,943
Ensembl chr17:19,154,571...19,232,411
JBrowse link
G ADCY4 adenylate cyclase 4 involved_in ISO
IEA
RGD
UniProt
InterPro
UniProt
PMID:11738086 PMID:12711600 GO_REF:0000002 GO_REF:0000043 RGD:2312641 RGD:2312674 NCBI chr 8:4,288,708...4,304,092
Ensembl chr 8:4,288,714...4,304,589
JBrowse link
G ADCY5 adenylate cyclase 5 involved_in ISS
IEA
IBA
ISO
(PMID:21873635) UniProt
InterPro
GO_Central
UniProt
RGD
GO_Central
PMID:10894801 PMID:11738086 PMID:12711600 PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000043 RGD:2312641 RGD:2312674 RGD:2315006 NCBI chr33:26,345,617...26,490,120
Ensembl chr33:26,345,617...26,504,616
JBrowse link
G ADCY6 adenylate cyclase 6 involved_in ISS
IEA
IBA
ISO
(PMID:21873635) UniProt
InterPro
UniProt
GO_Central
RGD
GO_Central
Ensembl
PMID:10866989 PMID:10894801 PMID:11738086 PMID:12711600 PMID:15579502 More... GO_REF:0000002 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 RGD:1598749 RGD:2312641 RGD:2312654 RGD:2312674 RGD:2312678 RGD:2313211 RGD:2315006 NCBI chr27:5,739,514...5,752,888
Ensembl chr27:5,733,586...5,752,888
JBrowse link
G ADCY7 adenylate cyclase 7 involved_in ISO
IEA
RGD
UniProt
PMID:12711600 GO_REF:0000043 RGD:2312674 NCBI chr 2:65,003,891...65,034,812
Ensembl chr 2:65,006,038...65,034,777
JBrowse link
G ADCY8 adenylate cyclase 8 involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
UniProt
InterPro
UniProt
RGD
PMID:16741924 PMID:19305019 PMID:19444869 PMID:21873635 GO_REF:0000002 GO_REF:0000043 RGD:2312769 RGD:2312785 RGD:7241269 NCBI chr13:27,723,530...27,937,821
Ensembl chr13:27,723,530...27,937,734
JBrowse link
G ADCY9 adenylate cyclase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:76465|PMID:7575502), (MGI:80863|PMID:8662814) Ensembl
Ensembl
MGI
RGD
PMID:7575502 PMID:8662814 PMID:19444869 GO_REF:0000107 MGI:76465 MGI:80863 RGD:2312785 NCBI chr 6:37,213,251...37,334,820
Ensembl chr 6:37,213,227...37,331,563
JBrowse link
G IGFBP1 insulin like growth factor binding protein 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000043 NCBI chr16:1,037,169...1,040,996
Ensembl chr16:1,037,162...1,167,094
JBrowse link
CD80 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TMEM106A transmembrane protein 106A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:19,917,591...19,926,578
Ensembl chr 9:19,915,973...19,958,789
JBrowse link
CD86 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TMEM106A transmembrane protein 106A involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:19,917,591...19,926,578
Ensembl chr 9:19,915,973...19,958,789
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5554502|PMID:24218451) MGI
Ensembl
Ensembl
PMID:24218451 GO_REF:0000107 MGI:5554502 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906
JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 involved_in ISO
IBA
(PMID:21873635) RGD
GO_Central
PMID:3010881 PMID:21873635 RGD:5133253 NCBI chr15:13,324,235...13,357,387
Ensembl chr15:13,326,185...13,358,152
JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUCY1A1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
(PMID:21873635)
(MGI:3640061|PMID:16614755)
UniProt
GO_Central
UniProt
InterPro
Ensembl
Ensembl
MGI
PMID:16614755 PMID:21873635 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 MGI:3640061 NCBI chr15:53,172,914...53,236,200
Ensembl chr15:53,174,157...53,234,533
JBrowse link
G GUCY1A2 guanylate cyclase 1 soluble subunit alpha 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:25,291,019...25,718,918
Ensembl chr 5:25,291,583...25,686,947
JBrowse link
G GUCY1B1 guanylate cyclase 1 soluble subunit beta 1 involved_in ISS
IEA
UniProt
Ensembl
InterPro
UniProt
InterPro
GO_REF:0000002 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 NCBI chr15:53,266,243...53,312,109
Ensembl chr15:53,265,350...53,312,111
JBrowse link
G GUCY2C guanylate cyclase 2C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:31,915,552...31,989,748
Ensembl chr27:31,917,604...31,989,551
JBrowse link
G GUCY2D guanylate cyclase 2D, retinal involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000043 NCBI chr 5:32,844,033...32,859,263
Ensembl chr 5:32,844,033...32,857,687
JBrowse link
G GUCY2F guanylate cyclase 2F, retinal involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000043 NCBI chr  X:82,648,673...82,751,394
Ensembl chr  X:82,649,601...82,751,394
JBrowse link
G NPPA natriuretic peptide A involved_in
acts_upstream_of
IBA
ISS
ISO
(PMID:21873635) GO_Central
GO_Central
UniProt
RGD
PMID:10559136 PMID:21873635 GO_REF:0000024 RGD:619660 NCBI chr 2:84,406,317...84,408,115
Ensembl chr 2:84,396,073...84,408,385
JBrowse link
G NPPB natriuretic peptide B acts_upstream_of
involved_in
ISS
IBA
(PMID:21873635) GO_Central
GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr 2:84,395,844...84,397,473 JBrowse link
G NPPC natriuretic peptide C involved_in
acts_upstream_of
IBA
IEA
ISO
(PMID:21873635)
(MGI:2177134|PMID:11259675)
(PMID:1672777)
GO_Central
Ensembl
GO_Central
PMID:1672777 PMID:11259675 PMID:21873635 GO_REF:0000107 MGI:2177134 NCBI chr25:43,714,545...43,718,969
Ensembl chr25:43,717,939...43,718,996
JBrowse link
G NPR1 natriuretic peptide receptor 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:2179542|PMID:11997476)
GO_Central
GOC
UniProt
UniProt
PMID:11997476 PMID:21873635 GO_REF:0000043 MGI:2179542 NCBI chr 7:43,382,246...43,396,464
Ensembl chr 7:43,283,418...43,396,027
JBrowse link
G NPR2 natriuretic peptide receptor 2 acts_upstream_of
involved_in
ISO
IBA
IEA
(PMID:1672777)
(PMID:21873635)
GO_Central
GO_Central
UniProt
PMID:1672777 PMID:21873635 GO_REF:0000043 NCBI chr11:52,283,680...52,339,247
Ensembl chr11:52,321,590...52,339,249
JBrowse link
chondroitin sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHPF chondroitin polymerizing factor acts_upstream_of_or_within
involved_in
ISO (MGI:5462280|PMID:22952873)
(MGI:7266375|PMID:17253960)
(MGI:5462286|PMID:22952769)
(PMID:12761225)
MGI
FlyBase
PMID:12761225 PMID:17253960 PMID:22952769 PMID:22952873 MGI:5462280 MGI:5462286 MGI:7266375 NCBI chr37:26,048,236...26,052,871
Ensembl chr37:26,025,993...26,052,806
JBrowse link
G CHPF2 chondroitin polymerizing factor 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr16:15,271,805...15,280,024 JBrowse link
G CHST11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in
ISO (MGI:4941099|PMID:21138417)
(PMID:11056388)
(MGI:1354846|PMID:10722746)
MGI
UniProt
PMID:10722746 PMID:11056388 PMID:21138417 MGI:1354846 MGI:4941099 NCBI chr10:33,555,629...33,810,808
Ensembl chr10:33,555,628...33,810,558
JBrowse link
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,702,493...14,713,440
Ensembl chr 6:14,705,427...14,706,686
JBrowse link
G CHST13 carbohydrate sulfotransferase 13 involved_in ISO (PMID:12080076) UniProt PMID:12080076 NCBI chr20:723,380...746,935 JBrowse link
G CHST3 carbohydrate sulfotransferase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:2156294|PMID:11696535)
(MGI:1206144|PMID:9597547)
GO_Central
RGD
GO_Central
Ensembl
MGI
PMID:9597547 PMID:11696535 PMID:16495484 PMID:21873635 GO_REF:0000107 MGI:1206144 MGI:2156294 RGD:1600854 NCBI chr 4:22,668,430...22,699,157
Ensembl chr 4:22,691,336...22,694,254
JBrowse link
G CHST7 carbohydrate sulfotransferase 7 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr  X:40,209,884...40,239,077
Ensembl chr  X:40,210,096...40,211,556
JBrowse link
G CHSY1 chondroitin sulfate synthase 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(PMID:11514575)
(MGI:5462286|PMID:22952769)
GO_Central
Ensembl
MGI
PMID:11514575 PMID:21873635 PMID:22952769 GO_REF:0000107 MGI:5462286 NCBI chr 3:39,844,227...39,916,484
Ensembl chr 3:39,844,195...40,021,573
JBrowse link
G CHSY3 chondroitin sulfate synthase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:18,621,196...18,855,018
Ensembl chr11:18,620,781...18,854,177
JBrowse link
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:22,219,324...22,546,501
Ensembl chr16:22,219,861...22,392,937
JBrowse link
G CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:3,878,049...3,944,654
Ensembl chr28:3,879,258...3,907,222
JBrowse link
G SLC35D1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO (MGI:3771453|PMID:17952091) MGI PMID:17952091 MGI:3771453 NCBI chr 5:43,474,641...43,522,237
Ensembl chr 5:43,474,674...43,522,042
JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,935,532...72,964,151
Ensembl chr 3:72,839,920...72,963,208
JBrowse link
G XYLT1 xylosyltransferase 1 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 6:26,742,853...27,041,666
Ensembl chr 6:26,742,853...27,041,666
JBrowse link
G XYLT2 xylosyltransferase 2 involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 9:26,316,812...26,329,333
Ensembl chr 9:26,316,774...26,329,511
JBrowse link
chondroitin sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GAT1 beta-1,3-glucuronyltransferase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:741,231...747,641
Ensembl chr 5:745,747...748,899
JBrowse link
G B3GAT2 beta-1,3-glucuronyltransferase 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr12:33,321,691...33,400,516
Ensembl chr12:33,321,208...33,401,171
JBrowse link
G B3GAT3 beta-1,3-glucuronyltransferase 3 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(PMID:21763480)
GO_Central
Ensembl
MGI
PMID:21763480 PMID:21873635 GO_REF:0000107 NCBI chr18:54,020,547...54,025,264
Ensembl chr18:54,020,736...54,024,910
JBrowse link
G CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4941099|PMID:21138417) MGI
Ensembl
PMID:21138417 GO_REF:0000107 MGI:4941099 NCBI chr28:3,878,049...3,944,654
Ensembl chr28:3,879,258...3,907,222
JBrowse link
G CYTL1 cytokine like 1 acts_upstream_of_or_within ISO (MGI:3758399|PMID:17644814) MGI PMID:17644814 MGI:3758399 NCBI chr 3:70,354,099...70,358,521
Ensembl chr 3:70,354,090...70,359,128
JBrowse link
G IGF1 insulin like growth factor 1 acts_upstream_of_or_within ISO (MGI:3758399|PMID:17644814) MGI PMID:17644814 MGI:3758399 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G PXYLP1 2-phosphoxylose phosphatase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:37,145,065...37,197,808
Ensembl chr23:37,145,086...37,196,427
JBrowse link
G XYLT1 xylosyltransferase 1 involved_in ISS
IBA
(PMID:21873635) UniProt
UniProt
GO_Central
GO_Central
PMID:21873635 GO_REF:0000024 NCBI chr 6:26,742,853...27,041,666
Ensembl chr 6:26,742,853...27,041,666
JBrowse link
G XYLT2 xylosyltransferase 2 involved_in ISS
IBA
IEA
(PMID:21873635) UniProt
UniProt
GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:26,316,812...26,329,333
Ensembl chr 9:26,316,774...26,329,511
JBrowse link
chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:22,219,324...22,546,501
Ensembl chr16:22,219,861...22,392,937
JBrowse link
CMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCK deoxycytidine kinase involved_in IEA GOC GO_REF:0000108 NCBI chr13:60,206,742...60,236,338
Ensembl chr13:60,205,937...60,235,678
JBrowse link
G UCK2 uridine-cytidine kinase 2 involved_in IEA GOC GO_REF:0000108 NCBI chr38:17,475,789...17,555,926
Ensembl chr38:17,479,558...17,579,675
JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,361,301...24,379,807
Ensembl chr 5:24,361,301...24,379,812
JBrowse link
G ACOT7 acyl-CoA thioesterase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:60,153,616...60,239,254
Ensembl chr 5:60,153,616...60,239,239
JBrowse link
G COASY Coenzyme A synthase involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:2181228|PMID:11980892)
GO_Central
Ensembl
InterPro
MGI
PMID:11980892 PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:2181228 NCBI chr 9:20,396,334...20,400,542
Ensembl chr 9:20,396,367...20,400,147
JBrowse link
G DCAKD dephospho-CoA kinase domain containing involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 9:18,456,538...18,483,106
Ensembl chr 9:18,474,509...18,482,143
JBrowse link
G PANK1 pantothenate kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:4461354|PMID:20559429), (MGI:5446555|PMID:22815849)
(PMID:21873635)
(MGI:3607004|PMID:16040613)
InterPro
MGI
InterPro
GO_Central
PMID:16040613 PMID:20559429 PMID:21873635 PMID:22815849 GO_REF:0000002 MGI:3607004 MGI:4461354 MGI:5446555 NCBI chr28:4,476,920...4,534,501 JBrowse link
G PANK2 pantothenate kinase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:5446555|PMID:22815849)
(PMID:21873635)
InterPro
MGI
GO_Central
PMID:21873635 PMID:22815849 GO_REF:0000002 MGI:5446555 NCBI chr24:17,461,406...17,475,248
Ensembl chr24:17,463,447...17,490,360
JBrowse link
G PANK3 pantothenate kinase 3 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3607004|PMID:16040613)
GO_Central
Ensembl
InterPro
Ensembl
MGI
PMID:16040613 PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:3607004 NCBI chr 4:43,168,407...43,192,451
Ensembl chr 4:43,137,709...43,186,022
JBrowse link
G PANK4 pantothenate kinase 4 (inactive) involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 NCBI chr 5:57,370,624...57,386,095
Ensembl chr 5:57,370,946...57,386,089
JBrowse link
G PPCDC phosphopantothenoylcysteine decarboxylase involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr30:38,031,086...38,068,199
Ensembl chr30:38,037,227...38,056,756
JBrowse link
G PPCS phosphopantothenoylcysteine synthetase involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
Ensembl
PMID:21873635 GO_REF:0000107 GO_REF:0000117 NCBI chr15:813,435...817,732
Ensembl chr15:813,870...816,825
JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr15:2,067,767...2,093,014
Ensembl chr15:2,067,763...2,093,014
JBrowse link
G CTPS2 CTP synthase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr  X:12,759,998...12,867,707
Ensembl chr  X:12,760,015...12,865,111
JBrowse link
G NME1 non-metastatic cells 1, protein (NM23A) expressed in involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 9:26,990,336...26,998,895
Ensembl chr 9:26,990,469...26,998,955
JBrowse link
G NME2 non-metastatic cells 2, protein (NM23B) expressed in involved_in IEA
ISO
InterPro
InterPro
RGD
PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chr 9:27,002,114...27,005,740
Ensembl chr 9:27,001,733...27,015,934
JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:40,119,443...40,122,418 JBrowse link
G NME5 NME/NM23 family member 5 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr11:25,772,162...25,792,856
Ensembl chr11:25,772,157...25,792,176
JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:40,769,394...40,778,802
Ensembl chr20:40,769,501...40,776,496
JBrowse link
G NME7 NME/NM23 family member 7 involved_in IEA UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 7:29,201,273...29,464,072
Ensembl chr 7:29,206,307...29,463,467
JBrowse link
G NME9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr23:34,515,003...34,537,386
Ensembl chr23:34,483,520...34,537,312
JBrowse link
CTP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UCK1 uridine-cytidine kinase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 9:52,609,972...52,615,655
Ensembl chr 9:52,609,313...52,614,622
JBrowse link
G UCK2 uridine-cytidine kinase 2 involved_in IEA UniProt
Ensembl
GO_REF:0000041 GO_REF:0000107 NCBI chr38:17,475,789...17,555,926
Ensembl chr38:17,479,558...17,579,675
JBrowse link
G UCKL1 uridine-cytidine kinase 1 like 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr24:47,412,520...47,423,222
Ensembl chr24:47,412,521...47,432,860
JBrowse link
G ZNF512B zinc finger protein 512B involved_in IEA UniProt GO_REF:0000041 NCBI chr24:47,423,699...47,434,114
Ensembl chr24:47,412,521...47,432,860
JBrowse link
dAMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:24,540,626...25,047,032
Ensembl chr 4:24,540,659...25,046,464
JBrowse link
G DCK deoxycytidine kinase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:60,206,742...60,236,338
Ensembl chr13:60,205,937...60,235,678
JBrowse link
G DGUOK deoxyguanosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:49,107,085...49,139,366
Ensembl chr17:49,104,546...49,168,782
JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3620422|PMID:12163459) MGI
Ensembl
Ensembl
PMID:12163459 GO_REF:0000107 MGI:3620422 NCBI chr 4:24,540,626...25,047,032
Ensembl chr 4:24,540,659...25,046,464
JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chr15:13,324,235...13,357,387
Ensembl chr15:13,326,185...13,358,152
JBrowse link
deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RRM1 ribonucleotide reductase catalytic subunit M1 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr21:26,595,838...26,631,476
Ensembl chr21:26,595,914...26,631,135
JBrowse link
G RRM2 ribonucleotide reductase regulatory subunit M2 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr17:7,106,515...7,113,868
Ensembl chr17:7,104,961...7,122,939
JBrowse link
G RRM2B ribonucleotide reductase regulatory TP53 inducible subunit M2B acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:2152627|PMID:11517226)
(PMID:21873635)
MGI
InterPro
GO_Central
PMID:11517226 PMID:21873635 GO_REF:0000002 MGI:2152627 NCBI chr13:3,774,725...3,838,576
Ensembl chr13:3,799,025...3,837,934
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHST12 carbohydrate sulfotransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,702,493...14,713,440
Ensembl chr 6:14,705,427...14,706,686
JBrowse link
G CHST14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within ISO (PMID:11470797) MGI PMID:11470797 NCBI chr30:7,640,988...7,643,576
Ensembl chr30:7,640,637...7,642,778
JBrowse link
G DSE dermatan sulfate epimerase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:56,787,809...56,868,037
Ensembl chr 1:56,787,256...56,867,716
JBrowse link
dermatan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GAT3 beta-1,3-glucuronyltransferase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21763480) Ensembl
Ensembl
MGI
PMID:21763480 GO_REF:0000107 NCBI chr18:54,020,547...54,025,264
Ensembl chr18:54,020,736...54,024,910
JBrowse link
G CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr28:3,878,049...3,944,654
Ensembl chr28:3,879,258...3,907,222
JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 involved_in ISO (PMID:31201273) RGD
UniProt
PMID:4307347 PMID:31201273 RGD:5147877 NCBI chr14:820,048...826,694
Ensembl chr14:820,093...827,250
JBrowse link
dolichol-linked oligosaccharide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase involved_in ISO (PMID:14973778) UniProt PMID:14973778 NCBI chr 6:36,369,246...36,380,963 JBrowse link
G ALG12 ALG12 alpha-1,6-mannosyltransferase acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11983712) MGI
InterPro
PMID:11983712 GO_REF:0000002 NCBI chr10:17,293,945...17,300,982
Ensembl chr10:17,293,552...17,300,974
JBrowse link
G ALG13 ALG13 UDP-N-acetylglucosaminyltransferase subunit involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:84,752,284...84,825,414 JBrowse link
G ALG14 ALG14 UDP-N-acetylglucosaminyltransferase subunit involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 6:54,235,444...54,355,899
Ensembl chr 6:54,155,584...54,324,901
JBrowse link
G ALG2 ALG2 alpha-1,3/1,6-mannosyltransferase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr11:56,274,494...56,279,456
Ensembl chr11:56,275,495...56,279,412
JBrowse link
G ALG6 ALG6 alpha-1,3-glucosyltransferase involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:46,717,779...46,784,488
Ensembl chr 5:46,718,786...46,783,809
JBrowse link
G DPAGT1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 involved_in ISO
IEA
RGD
InterPro
Ensembl
InterPro
Ensembl
PMID:8280061 GO_REF:0000002 GO_REF:0000107 RGD:1624315 NCBI chr 5:14,760,518...14,765,306
Ensembl chr 5:14,760,784...14,764,967
JBrowse link
G LOC477647 ALG10 alpha-1,2-glucosyltransferase involved_in IEA UniProt GO_REF:0000104 NCBI chr27:15,121,327...15,127,229 JBrowse link
G MPDU1 mannose-P-dolichol utilization defect 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:32,504,644...32,507,903
Ensembl chr 5:32,504,695...32,507,291
JBrowse link
G RFT1 RFT1 homolog involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr20:36,781,782...36,822,209 JBrowse link
G SRD5A3 steroid 5 alpha-reductase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
UniProt
Ensembl
PMID:21873635 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr13:47,627,854...47,643,116
Ensembl chr13:47,627,913...47,642,566
JBrowse link
dolichyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHDDS dehydrodolichyl diphosphate synthase subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:73,583,927...73,611,321
Ensembl chr 2:73,579,042...73,610,696
JBrowse link
G HMGN2 high mobility group nucleosomal binding domain 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:73,579,042...73,582,786
Ensembl chr 2:73,579,042...73,610,696
JBrowse link
G NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:57,866,760...57,895,505
Ensembl chr 1:57,866,879...57,893,077
JBrowse link
dTDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chr17:4,466,615...4,478,546 JBrowse link
G DTYMK deoxythymidylate kinase involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:21873635)
(MGI:77260|PMID:8845311)
RGD
GO_Central
MGI
PMID:220041 PMID:8845311 PMID:21873635 MGI:77260 RGD:5133687 NCBI chr25:51,520,307...51,535,407
Ensembl chr25:51,520,581...51,526,069
Ensembl chr25:51,520,581...51,526,069
JBrowse link
dTMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTD dCMP deaminase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:47,350,493...47,376,184
Ensembl chr16:47,350,357...47,375,127
Ensembl chr16:47,350,357...47,375,127
JBrowse link
G DUT deoxyuridine triphosphatase involved_in ISO (PMID:10952785), (PMID:15322254) MGI PMID:10952785 PMID:15322254 NCBI chr30:14,572,766...14,585,621
Ensembl chr30:14,572,602...14,585,530
JBrowse link
G SHMT1 serine hydroxymethyltransferase 1 involved_in ISO (MGI:3849912|PMID:19513116) BHF-UCL PMID:19513116 MGI:3849912 NCBI chr 5:41,221,531...41,248,653
Ensembl chr 5:41,221,562...41,253,166
JBrowse link
G TYMS thymidylate synthetase involved_in ISO
IEA
IBA
(PMID:21873635) RGD
Ensembl
InterPro
InterPro
GO_Central
PMID:9894005 PMID:21873635 GO_REF:0000002 GO_REF:0000107 RGD:1545055 NCBI chr 7:67,487,927...67,497,747
Ensembl chr 7:67,487,927...67,497,747
JBrowse link
dTTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DTYMK deoxythymidylate kinase involved_in ISO
IBA
(PMID:21873635) RGD
GO_Central
PMID:220041 PMID:21873635 RGD:5133687 NCBI chr25:51,520,307...51,535,407
Ensembl chr25:51,520,581...51,526,069
Ensembl chr25:51,520,581...51,526,069
JBrowse link
G TBPL1 TATA-box binding protein like 1 acts_upstream_of_or_within ISO (MGI:2159505|PMID:11861477) MGI PMID:11861477 MGI:2159505 NCBI chr 1:26,898,344...26,938,452
Ensembl chr 1:26,899,859...26,936,995
JBrowse link
dUDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chr15:13,324,235...13,357,387
Ensembl chr15:13,326,185...13,358,152
JBrowse link
G CMPK2 cytidine/uridine monophosphate kinase 2 ISO RGD PMID:192455 RGD:5133256 NCBI chr17:4,466,615...4,478,546 JBrowse link
G DTYMK deoxythymidylate kinase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:51,520,307...51,535,407
Ensembl chr25:51,520,581...51,526,069
Ensembl chr25:51,520,581...51,526,069
JBrowse link
dUMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTD dCMP deaminase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:47,350,493...47,376,184
Ensembl chr16:47,350,357...47,375,127
Ensembl chr16:47,350,357...47,375,127
JBrowse link
G DUT deoxyuridine triphosphatase involved_in ISO
IEA
IBA
(PMID:21873635) RGD
UniProt
GO_Central
PMID:1315924 PMID:3032103 PMID:21873635 GO_REF:0000041 RGD:2300191 RGD:2301218 NCBI chr30:14,572,766...14,585,621
Ensembl chr30:14,572,602...14,585,530
JBrowse link
elastin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (MGI:83737|PMID:8096378) MGI PMID:8096378 MGI:83737 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869
JBrowse link
FasL biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHLDA1 pleckstrin homology like domain family A member 1 acts_upstream_of_or_within ISO (MGI:1095266|PMID:8673705) MGI PMID:8673705 MGI:1095266 NCBI chr15:19,127,371...19,128,912
Ensembl chr15:19,128,035...19,128,779
JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCDH glutaryl-CoA dehydrogenase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:6895440 PMID:21873635 RGD:1598697 NCBI chr20:49,284,341...49,290,456
Ensembl chr20:49,284,425...49,290,849
JBrowse link
FMN biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RFK riboflavin kinase involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 1:82,062,290...82,071,033
Ensembl chr 1:82,059,631...82,069,257
JBrowse link
galactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT1 beta-1,3-galactosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:12,263,162...12,766,525
Ensembl chr36:12,761,821...12,762,801
JBrowse link
G B3GALT2 beta-1,3-galactosyltransferase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr38:5,868,822...5,876,539
Ensembl chr38:5,874,011...5,875,279
JBrowse link
G B4GALT3 beta-1,4-galactosyltransferase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr38:21,301,835...21,306,854
Ensembl chr38:21,302,003...21,312,958
JBrowse link
G FA2H fatty acid 2-hydroxylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:75,878,539...75,923,886
Ensembl chr 5:75,878,243...75,948,094
JBrowse link
G GAL3ST1 galactose-3-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:1355015|PMID:10727929)
(PMID:21873635)
MGI
Ensembl
GO_Central
GO_Central
PMID:10727929 PMID:21873635 GO_REF:0000107 MGI:1355015 NCBI chr26:23,634,884...23,654,205
Ensembl chr26:23,637,844...23,646,219
JBrowse link
G UGT8 UDP glycosyltransferase 8 involved_in ISO PMID:8713090 UniProt PMID:8713090 RGD:39458006 NCBI chr32:34,148,874...34,250,891
Ensembl chr32:34,179,247...34,233,116
JBrowse link
ganglioside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT4 beta-1,3-galactosyltransferase 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:2,719,112...2,720,997 JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1331265|PMID:10021458)
(PMID:21873635)
MGI
GO_Central
PMID:10021458 PMID:21873635 MGI:1331265 NCBI chr10:1,703,846...1,756,837
Ensembl chr10:1,703,169...1,709,994
JBrowse link
G ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:70,060,406...70,583,974
Ensembl chr 6:70,062,555...70,574,865
JBrowse link
G ST6GALNAC4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:55,499,100...55,513,562
Ensembl chr 9:55,504,639...55,513,174
JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:69,706,717...69,867,760
Ensembl chr 6:69,709,114...69,867,648
JBrowse link
G ST6GALNAC6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1354410|PMID:10702226)
(PMID:21873635)
MGI
GO_Central
PMID:10702226 PMID:21873635 MGI:1354410 NCBI chr 9:55,520,083...55,533,205
Ensembl chr 9:55,520,109...55,532,055
JBrowse link
G ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:47,588,804...47,654,853
Ensembl chr 3:47,588,797...47,655,593
JBrowse link
G ST8SIA3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 involved_in ISO (PMID:10766765) BHF-UCL PMID:10766765 NCBI chr 1:18,541,197...18,557,887
Ensembl chr 1:18,549,942...18,557,893
JBrowse link
G ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 3:9,708,130...9,801,547
Ensembl chr 3:9,708,173...9,845,015
JBrowse link
G ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 2:19,392,690...19,618,127
Ensembl chr 2:19,482,468...19,616,339
JBrowse link
ganglioside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6196231|PMID:30114188) UniProt PMID:30114188 MGI:6196231 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:57,849,872...57,917,289
Ensembl chr 7:57,849,884...57,914,360
JBrowse link
G ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:29,853,182...29,949,004
Ensembl chr13:29,846,834...29,872,918
JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,377,782...76,427,998
Ensembl chr 5:76,379,702...76,394,525
JBrowse link
G ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 involved_in ISO (MGI:6467685|PMID:22735313) UniProt PMID:22735313 MGI:6467685 NCBI chr15:16,324,752...16,434,256
Ensembl chr15:16,324,899...16,401,616
JBrowse link
GDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUK1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chr14:820,048...826,694
Ensembl chr14:820,093...827,250
JBrowse link
GDP-L-fucose salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FCSK fucose kinase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:76,442,597...76,463,165
Ensembl chr 5:76,443,411...76,462,771
JBrowse link
GDP-mannose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GMPPB GDP-mannose pyrophosphorylase B involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
Ensembl
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr20:39,550,799...39,553,045
Ensembl chr20:39,550,799...39,553,045
JBrowse link
G MPI mannose phosphate isomerase acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:5523713|PMID:24218558)
(PMID:21873635)
MGI
UniProt
GO_Central
PMID:21873635 PMID:24218558 GO_REF:0000041 MGI:5523713 NCBI chr30:37,933,091...37,940,945
Ensembl chr30:37,932,186...37,940,971
JBrowse link
G PMM1 phosphomannomutase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr10:23,699,476...23,706,716
Ensembl chr10:23,700,387...23,706,547
JBrowse link
G PMM2 phosphomannomutase 2 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 NCBI chr 6:33,346,969...33,371,095
Ensembl chr 6:33,347,270...33,371,025
JBrowse link
globoside biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4GALT alpha 1,4-galactosyltransferase acts_upstream_of_or_within ISO (MGI:5445364|PMID:22875802)
(MGI:3623723|PMID:16476743)
MGI PMID:16476743 PMID:22875802 MGI:3623723 MGI:5445364 NCBI chr10:22,752,657...22,776,858
Ensembl chr10:22,774,834...22,776,069
JBrowse link
globoside biosynthetic process via lactosylceramide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:76,377,782...76,427,998
Ensembl chr 5:76,379,702...76,394,525
JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chr10:68,067,817...68,125,001
Ensembl chr10:68,073,062...68,125,007
JBrowse link
glucosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FA2H fatty acid 2-hydroxylase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:75,878,539...75,923,886
Ensembl chr 5:75,878,243...75,948,094
JBrowse link
G UGCG UDP-glucose ceramide glucosyltransferase involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr11:66,439,346...66,472,897
Ensembl chr11:66,439,346...66,472,897
JBrowse link
glucuronate catabolic process to xylulose 5-phosphate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1A1 aldo-keto reductase family 1 member A1 involved_in ISO (MGI:7262842|PMID:38160) MGI PMID:38160 MGI:7262842 NCBI chr15:14,792,398...14,808,805
Ensembl chr15:14,742,012...14,808,592
JBrowse link
G CRYL1 crystallin lambda 1 involved_in ISO (MGI:7262842|PMID:38160) MGI PMID:38160 MGI:7262842 NCBI chr25:17,551,586...17,733,754
Ensembl chr25:17,562,926...17,733,630
JBrowse link
G DCXR dicarbonyl and L-xylulose reductase involved_in ISO (MGI:2179664|PMID:11882650) MGI PMID:11882650 MGI:2179664 NCBI chr 9:289,864...291,518
Ensembl chr 9:289,889...291,480
JBrowse link
G SORD sorbitol dehydrogenase involved_in ISO (MGI:7262842|PMID:38160) MGI PMID:38160 MGI:7262842 NCBI chr30:11,467,259...11,501,166
Ensembl chr30:11,467,253...11,500,641
JBrowse link
glyceraldehyde-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TKT transketolase involved_in ISO (PMID:9611778) UniProt PMID:9611778 NCBI chr20:36,690,540...36,705,980
Ensembl chr20:36,681,531...36,742,199
JBrowse link
G TPI1 triosephosphate isomerase 1 involved_in IBA
ISS
IEA
(PMID:21873635) GO_Central
UniProt
GO_Central
Ensembl
Ensembl
UniProt
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr27:38,154,519...38,157,900
Ensembl chr27:38,154,519...38,158,137
JBrowse link
glycerol-3-phosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GK glycerol kinase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:25,748,060...25,834,462 JBrowse link
G GK2 glycerol kinase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr32:3,731,108...3,732,973
Ensembl chr32:3,731,281...3,732,942
JBrowse link
G GK5 glycerol kinase 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:37,925,778...37,995,782
Ensembl chr23:37,931,409...37,995,747
JBrowse link
glycolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAL3ST1 galactose-3-O-sulfotransferase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr26:23,634,884...23,654,205
Ensembl chr26:23,637,844...23,646,219
JBrowse link
G GAL3ST2 galactose-3-O-sulfotransferase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr25:51,581,449...51,594,240
Ensembl chr25:51,581,546...51,597,774
JBrowse link
G GAL3ST3 galactose-3-O-sulfotransferase 3 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr18:51,215,280...51,222,962
Ensembl chr18:51,219,156...51,222,418
JBrowse link
G GAL3ST4 galactose-3-O-sulfotransferase 4 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 6:9,361,856...9,367,781
Ensembl chr 6:9,361,940...9,367,795
JBrowse link
G SCCPDH saccharopine dehydrogenase (putative) involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:37,449,528...37,488,047
Ensembl chr 7:37,449,738...37,487,682
Ensembl chr 7:37,449,738...37,487,682
JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO (PMID:9266697) BHF-UCL PMID:9266697 NCBI chr 5:76,377,782...76,427,998
Ensembl chr 5:76,379,702...76,394,525
JBrowse link
G ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:8,132,663...8,160,008
Ensembl chr 5:8,133,085...8,141,254
JBrowse link
G ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2182536|PMID:11980897) MGI
Ensembl
PMID:11980897 GO_REF:0000107 MGI:2182536 NCBI chr 2:19,392,690...19,618,127
Ensembl chr 2:19,482,468...19,616,339
JBrowse link
glycoprotein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A4GNT alpha-1,4-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (PMID:10430883) MGI PMID:10430883 NCBI chr23:34,339,955...34,352,204
Ensembl chr23:34,341,628...34,348,068
JBrowse link
G B4GALT1 beta-1,4-galactosyltransferase 1 acts_upstream_of_or_within ISO (MGI:1339510|PMID:10381349), (MGI:2148393|PMID:11463354), (MGI:3045482|PMID:15158676), (MGI:3619189|PMID:12714507) MGI PMID:10381349 PMID:11463354 PMID:12714507 PMID:15158676 MGI:1339510 MGI:2148393 MGI:3045482 MGI:3619189 NCBI chr11:50,223,880...50,276,745
Ensembl chr11:50,226,242...50,276,730
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804
JBrowse link
G FKRP fukutin related protein acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:2447230|PMID:12471058) MGI
Ensembl
PMID:12471058 GO_REF:0000107 MGI:2447230 NCBI chr 1:109,166,527...109,177,393
Ensembl chr 1:109,168,644...109,178,319
JBrowse link
G GAL3ST2 galactose-3-O-sulfotransferase 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:3696920|PMID:15926885)
(PMID:21873635)
MGI
GO_Central
PMID:15926885 PMID:21873635 MGI:3696920 NCBI chr25:51,581,449...51,594,240
Ensembl chr25:51,581,546...51,597,774
JBrowse link
G GAL3ST4 galactose-3-O-sulfotransferase 4 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:11333265) MGI
Ensembl
Ensembl
PMID:11333265 GO_REF:0000107 NCBI chr 6:9,361,856...9,367,781
Ensembl chr 6:9,361,940...9,367,795
JBrowse link
G GCNT1 glucosaminyl (N-acetyl) transferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:81,985,519...82,017,420 JBrowse link
G GOLPH3 golgi phosphoprotein 3 involved_in ISO (PMID:23027862) UniProt PMID:23027862 NCBI chr 4:75,302,580...75,324,086
Ensembl chr 4:75,298,111...75,322,768
JBrowse link
G INS insulin involved_in ISO (PMID:8069456) AgBase PMID:8069456 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122
JBrowse link
G ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 involved_in ISO (PMID:9266697) BHF-UCL PMID:9266697 NCBI chr 5:76,377,782...76,427,998
Ensembl chr 5:76,379,702...76,394,525
JBrowse link
G ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in ISO (PMID:8288606) BHF-UCL PMID:8288606 NCBI chr 5:8,132,663...8,160,008
Ensembl chr 5:8,133,085...8,141,254
JBrowse link
G TNIP1 TNFAIP3 interacting protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,150,734...58,200,158
Ensembl chr 4:58,149,882...58,199,644
JBrowse link
glycosaminoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GALT6 beta-1,3-galactosyltransferase 6 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:2152770|PMID:11551958)
(PMID:21873635)
MGI
GO_Central
PMID:11551958 PMID:21873635 MGI:2152770 NCBI chr 5:56,421,687...56,423,120
Ensembl chr 5:56,405,372...56,422,771
JBrowse link
G B3GAT1 beta-1,3-glucuronyltransferase 1 involved_in ISO (MGI:3757975|PMID:12032138), (MGI:5912673|PMID:26659409) MGI PMID:12032138 PMID:26659409 MGI:3757975 MGI:5912673 NCBI chr 5:741,231...747,641
Ensembl chr 5:745,747...748,899
JBrowse link
G B3GAT3 beta-1,3-glucuronyltransferase 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr18:54,020,547...54,025,264
Ensembl chr18:54,020,736...54,024,910
JBrowse link
G B4GALT7 beta-1,4-galactosyltransferase 7 involved_in ISO (PMID:10438455)
(MGI:6492443|PMID:33208938)
UniProt
MGI
PMID:10438455 PMID:33208938 MGI:6492443 NCBI chr11:3,497,860...3,507,513
Ensembl chr11:3,498,153...3,505,034
JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in ISO (PMID:12907669) BHF-UCL PMID:12907669 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469
JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr18:44,987,310...45,122,339
Ensembl chr18:44,987,748...45,129,974
JBrowse link
G HEXA hexosaminidase subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr30:35,836,788...35,862,525 JBrowse link
G HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 involved_in ISO (PMID:8900198), (PMID:9988768)
(MGI:6708015|PMID:15060080)
UniProt PMID:8900198 PMID:9988768 PMID:15060080 MGI:6708015 NCBI chr 3:68,306,512...68,336,879 JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 involved_in ISO (PMID:9988768) UniProt PMID:9988768 NCBI chr 6:22,814,966...22,905,633
Ensembl chr 6:22,815,738...22,906,537
JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO (PMID:15304505), (PMID:9988768) UniProt PMID:9988768 PMID:15304505 NCBI chr 5:37,400,144...37,494,154
Ensembl chr 5:37,400,279...37,494,089
JBrowse link
G LOC489516 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:38,023,858...38,066,548
Ensembl chr 5:38,023,684...38,065,487
JBrowse link
G PDGFRB platelet derived growth factor receptor beta ISO RGD PMID:11903042 RGD:1581762 NCBI chr 4:58,925,922...58,963,639
Ensembl chr 4:58,926,351...58,962,283
JBrowse link
G PXYLP1 2-phosphoxylose phosphatase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr23:37,145,065...37,197,808
Ensembl chr23:37,145,086...37,196,427
JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:72,935,532...72,964,151
Ensembl chr 3:72,839,920...72,963,208
JBrowse link
G XYLT1 xylosyltransferase 1 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 6:26,742,853...27,041,666
Ensembl chr 6:26,742,853...27,041,666
JBrowse link
G XYLT2 xylosyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3713963|PMID:17517600) MGI
Ensembl
PMID:17517600 GO_REF:0000107 MGI:3713963 NCBI chr 9:26,316,812...26,329,333
Ensembl chr 9:26,316,774...26,329,511
JBrowse link
glycosphingolipid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G A3GALT2 alpha 1,3-galactosyltransferase 2 acts_upstream_of_or_within
involved_in
ISO (MGI:5445364|PMID:22875802)
PMID:12626403
PMID:10854427
RGD
MGI
UniProt
PMID:10854427 PMID:12626403 PMID:22875802 MGI:5445364 RGD:1299594 RGD:632674 NCBI chr 2:68,117,648...68,138,610
Ensembl chr 2:68,118,413...68,138,095
JBrowse link
G A4GALT alpha 1,4-galactosyltransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:22,752,657...22,776,858
Ensembl chr10:22,774,834...22,776,069
JBrowse link
G B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr10:1,703,846...1,756,837
Ensembl chr10:1,703,169...1,709,994
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in ISO
IBA
(PMID:21873635) RGD
GO_Central
PMID:9593693 PMID:21873635 RGD:70807 NCBI chr 7:57,849,872...57,917,289
Ensembl chr 7:57,849,884...57,914,360
JBrowse link
G FUT4 fucosyltransferase 4 involved_in ISO (PMID:29593094) UniProt PMID:29593094 NCBI chr21:6,386,665...6,390,109
Ensembl chr21:6,389,021...6,390,793
JBrowse link
G FUT5 fucosyltransferase 5 (alpha (1,3) fucosyltransferase) involved_in ISO (PMID:29593094) UniProt PMID:29593094 NCBI chr20:54,216,560...54,238,103
Ensembl chr20:54,224,789...54,225,841
JBrowse link
G FUT9 fucosyltransferase 9 involved_in ISS
IEA
UniProt
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr12:54,581,280...54,784,072
Ensembl chr12:54,771,426...54,772,505
JBrowse link
G ST6GALNAC5 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 involved_in ISO (MGI:1346847|PMID:10521438) BHF-UCL PMID:10521438 MGI:1346847 NCBI chr 6:69,706,717...69,867,760
Ensembl chr 6:69,709,114...69,867,648
JBrowse link
G ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 involved_in ISO PMID:1606358 UniProt PMID:1606358 RGD:21201272 NCBI chr 7:44,583,638...44,656,823
Ensembl chr 7:44,591,092...44,646,048
JBrowse link
G TM9SF2 transmembrane 9 superfamily member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:49,515,350...49,578,519
Ensembl chr22:49,515,382...49,577,905
JBrowse link
GMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in ISO (MGI:6718249|PMID:6480832) MGI PMID:6480832 MGI:6718249 NCBI chr10:24,813,854...24,832,115 JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:22,420,645...22,446,769
Ensembl chr37:22,420,603...22,446,697
JBrowse link
G GMPS guanine monophosphate synthase involved_in
acts_upstream_of_or_within
ISO
IEA
IBA
(PMID:21873635)
(PMID:8089153)
RGD
UniProt
InterPro
GO_Central
UniProt
MGI
PMID:3436958 PMID:8089153 PMID:21873635 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 RGD:1599004 NCBI chr23:49,569,571...49,645,999
Ensembl chr23:49,569,531...49,699,199
JBrowse link
G IMPDH1 inosine monophosphate dehydrogenase 1 involved_in IEA UniProt GO_REF:0000104 NCBI chr14:8,001,575...8,013,181
Ensembl chr14:7,996,717...8,012,467
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 involved_in IEA UniProt
UniProt
Ensembl
GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr20:40,136,106...40,140,983
Ensembl chr20:40,136,154...40,140,972
JBrowse link
G LOC100856570 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr31:28,133,546...28,165,595 JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 involved_in ISO (MGI:64690|PMID:8299947)
(PMID:2183217)
MGI PMID:2183217 PMID:8299947 MGI:64690 NCBI chr31:29,032,399...29,063,706 JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chr13:48,296,232...48,682,650 JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in ISO (PMID:27590927) MGI PMID:27590927 NCBI chr 5:33,055,144...33,076,823
Ensembl chr 5:33,060,929...33,076,287
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:48,618,460...48,656,164
Ensembl chr13:48,620,714...48,655,780
JBrowse link
GMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADK adenosine kinase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:24,540,626...25,047,032
Ensembl chr 4:24,540,659...25,046,464
JBrowse link
G AMPD1 adenosine monophosphate deaminase 1 involved_in ISO (PMID:29079593) MGI PMID:29079593 NCBI chr17:52,377,411...52,399,525
Ensembl chr17:52,377,402...52,399,520
JBrowse link
G APRT adenine phosphoribosyltransferase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:64,563,154...64,565,537
Ensembl chr 5:64,563,192...64,565,445
JBrowse link
G GMPS guanine monophosphate synthase involved_in ISO PMID:6180773 MGI PMID:6180773 RGD:150521637 NCBI chr23:49,569,571...49,645,999
Ensembl chr23:49,569,531...49,699,199
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1331314|PMID:10037486)
(PMID:21873635)
MGI
GO_Central
GO_Central
PMID:10037486 PMID:21873635 MGI:1331314 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
GPI anchor biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASB11 ankyrin repeat and SOCS box containing 11 involved_in IEA
IBA
(PMID:21873635) UniProt
UniProt
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr  X:11,542,466...11,567,633
Ensembl chr  X:11,542,466...11,582,983
JBrowse link
G CWH43 cell wall biogenesis 43 C-terminal homolog involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:44,724,127...44,782,788
Ensembl chr13:44,724,131...44,782,804
JBrowse link
G DPM1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(PMID:9535917), (PMID:9724629)
(MGI:1329093|PMID:9535917)
GO_Central
MGI
PMID:9535917 PMID:9724629 PMID:21873635 MGI:1329093 NCBI chr24:37,249,203...37,268,620
Ensembl chr24:37,249,502...37,268,587
JBrowse link
G DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
PMID:9724629
(PMID:21873635)
MGI
Ensembl
GO_Central
PMID:9724629 PMID:21873635 GO_REF:0000107 RGD:69827 NCBI chr 9:55,484,244...55,488,359
Ensembl chr 9:55,485,605...55,487,735
JBrowse link
G DPM3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory involved_in ISO (PMID:10835346) UniProt PMID:10835346 NCBI chr 7:42,368,898...42,369,686 JBrowse link
G MPPE1 metallophosphoesterase 1 involved_in IEA UniProt
UniProt
InterPro
GO_REF:0000002 GO_REF:0000043 NCBI chr 7:77,521,348...77,544,033
Ensembl chr 7:77,521,546...77,540,405
JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr33:29,911,457...29,943,596
Ensembl chr33:29,912,569...29,962,175
JBrowse link
G NRROS negative regulator of reactive oxygen species involved_in IEA UniProt GO_REF:0000041 NCBI chr33:29,682,182...29,699,469
Ensembl chr33:29,692,371...29,767,771
JBrowse link
G PGAP1 post-GPI attachment to proteins inositol deacylase 1 ISO RGD PMID:14734546 RGD:1303970 NCBI chr37:6,430,344...6,499,310
Ensembl chr37:6,431,476...6,499,359
JBrowse link
G PGAP2 post-GPI attachment to proteins 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000043 NCBI chr21:26,348,328...26,371,266
Ensembl chr21:26,348,378...26,370,380
JBrowse link
G PGAP3 post-GPI attachment to proteins phospholipase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
UniProt
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000043 GO_REF:0000104 GO_REF:0000107 NCBI chr 9:22,793,854...22,806,321
Ensembl chr 9:22,793,792...22,806,321
JBrowse link
G PGAP4 post-GPI attachment to proteins GalNAc transferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:58,197,396...58,218,776
Ensembl chr11:58,200,051...58,201,262
JBrowse link
G PIGA phosphatidylinositol glycan anchor biosynthesis class A acts_upstream_of_or_within ISO (MGI:80283|PMID:8611683) MGI PMID:8611683 MGI:80283 NCBI chr  X:11,570,327...11,583,401 JBrowse link
G PIGB phosphatidylinositol glycan anchor biosynthesis class B involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
Ensembl
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr30:20,718,622...20,756,394
Ensembl chr30:20,718,274...20,756,365
JBrowse link
G PIGC phosphatidylinositol glycan anchor biosynthesis class C involved_in IEA UniProt
Ensembl
InterPro
GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr 7:26,548,894...26,551,702
Ensembl chr 7:26,550,524...26,551,417
JBrowse link
G PIGF phosphatidylinositol glycan anchor biosynthesis class F involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
InterPro
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000041 GO_REF:0000107 NCBI chr10:48,804,226...48,840,188
Ensembl chr10:48,718,482...48,840,074
JBrowse link
G PIGG phosphatidylinositol glycan anchor biosynthesis class G involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(PMID:15632136)
GO_Central
UniProt
InterPro
UniProt
MGI
PMID:15632136 PMID:21873635 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 NCBI chr 3:91,811,681...91,849,530
Ensembl chr 3:91,812,875...91,849,446
JBrowse link
G PIGH phosphatidylinositol glycan anchor biosynthesis class H involved_in IEA
IBA
(PMID:21873635) UniProt
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000041 NCBI chr 8:41,557,773...41,565,309
Ensembl chr 8:41,557,771...41,565,279
JBrowse link
G PIGK phosphatidylinositol glycan anchor biosynthesis class K involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:69,572,985...69,682,017
Ensembl chr 6:69,573,020...69,680,477
JBrowse link
G PIGL phosphatidylinositol glycan anchor biosynthesis class L involved_in ISO
IEA
IBA
(PMID:21873635) RGD
UniProt
InterPro
UniProt
GO_Central
PMID:9188481 PMID:21873635 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 RGD:729509 NCBI chr 5:39,601,288...39,687,125
Ensembl chr 5:39,601,291...39,686,908
JBrowse link
G PIGM phosphatidylinositol glycan anchor biosynthesis class M ISO RGD PMID:11226175 RGD:70624 NCBI chr38:22,150,006...22,151,589 JBrowse link
G PIGN phosphatidylinositol glycan anchor biosynthesis class N involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
UniProt
UniProt
PMID:21873635 GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000104 NCBI chr 1:14,684,026...14,791,221
Ensembl chr 1:14,685,694...14,805,691
JBrowse link
G PIGO phosphatidylinositol glycan anchor biosynthesis class O involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr11:51,661,954...51,671,169
Ensembl chr11:51,663,577...51,671,178
JBrowse link
G PIGP phosphatidylinositol glycan anchor biosynthesis class P acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3804747|PMID:10944123) MGI
UniProt
PMID:10944123 GO_REF:0000041 MGI:3804747 NCBI chr31:32,222,284...32,230,633
Ensembl chr31:32,220,152...32,230,656
JBrowse link
G PIGQ phosphatidylinositol glycan anchor biosynthesis class Q acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1339481|PMID:10373468)
(MGI:1307040|PMID:9729469)
(PMID:21873635)
MGI
GO_Central
PMID:9729469 PMID:10373468 PMID:21873635 MGI:1307040 MGI:1339481 NCBI chr 6:39,971,069...39,980,128
Ensembl chr 6:39,971,057...39,981,039
JBrowse link
G PIGS phosphatidylinositol glycan anchor biosynthesis class S involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:42,761,772...42,776,768
Ensembl chr 9:42,761,665...42,776,676
JBrowse link
G PIGU phosphatidylinositol glycan anchor biosynthesis class U involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr24:23,674,133...23,768,119
Ensembl chr24:23,674,137...23,768,073
JBrowse link
G PIGV phosphatidylinositol glycan anchor biosynthesis class V involved_in IEA UniProt
Ensembl
InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 GO_REF:0000043 GO_REF:0000107 NCBI chr 2:73,315,589...73,326,116
Ensembl chr 2:73,315,568...73,324,831
JBrowse link
G PIGW phosphatidylinositol glycan anchor biosynthesis class W involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr 9:36,419,807...36,424,596
Ensembl chr 9:36,421,216...36,424,218
JBrowse link
G PIGX phosphatidylinositol glycan anchor biosynthesis class X involved_in IEA UniProt GO_REF:0000041 NCBI chr33:29,740,435...29,767,931
Ensembl chr33:29,692,371...29,767,771
JBrowse link
G PIGY phosphatidylinositol glycan anchor biosynthesis class Y acts_upstream_of_or_within ISO (PMID:16162815) MGI PMID:16162815 NCBI chr32:11,808,967...11,812,436 JBrowse link
G PIGZ phosphatidylinositol glycan anchor biosynthesis class Z involved_in ISO (PMID:15208306) UniProt PMID:15208306 NCBI chr33:29,945,980...29,965,906 JBrowse link
G STOML2 stomatin like 2 involved_in ISO (MGI:1860649|PMID:10781593) UniProt PMID:10781593 MGI:1860649 NCBI chr11:51,675,963...51,679,313
Ensembl chr11:51,675,963...51,679,199
JBrowse link
GTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IMPDH1 inosine monophosphate dehydrogenase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:8,001,575...8,013,181
Ensembl chr14:7,996,717...8,012,467
JBrowse link
G IMPDH2 inosine monophosphate dehydrogenase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr20:40,136,106...40,140,983
Ensembl chr20:40,136,154...40,140,972
JBrowse link
G NME1 non-metastatic cells 1, protein (NM23A) expressed in involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 9:26,990,336...26,998,895
Ensembl chr 9:26,990,469...26,998,955
JBrowse link
G NME2 non-metastatic cells 2, protein (NM23B) expressed in involved_in IEA
ISO
InterPro
InterPro
RGD
PMID:1316151 GO_REF:0000002 RGD:729254 NCBI chr 9:27,002,114...27,005,740
Ensembl chr 9:27,001,733...27,015,934
JBrowse link
G NME4 NME/NM23 nucleoside diphosphate kinase 4 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:40,119,443...40,122,418 JBrowse link
G NME5 NME/NM23 family member 5 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr11:25,772,162...25,792,856
Ensembl chr11:25,772,157...25,792,176
JBrowse link
G NME6 NME/NM23 nucleoside diphosphate kinase 6 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:40,769,394...40,778,802
Ensembl chr20:40,769,501...40,776,496
JBrowse link
G NME7 NME/NM23 family member 7 involved_in IEA UniProt
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr 7:29,201,273...29,464,072
Ensembl chr 7:29,206,307...29,463,467
JBrowse link
G NME9 NME/NM23 family member 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr23:34,515,003...34,537,386
Ensembl chr23:34,483,520...34,537,312
JBrowse link
heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GAT3 beta-1,3-glucuronyltransferase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:21763480) Ensembl
Ensembl
MGI
PMID:21763480 GO_REF:0000107 NCBI chr18:54,020,547...54,025,264
Ensembl chr18:54,020,736...54,024,910
JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:4431165|PMID:20080592) MGI
InterPro
PMID:20080592 GO_REF:0000002 MGI:4431165 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469
JBrowse link
G EXT2 exostosin glycosyltransferase 2 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3608483|PMID:16236767) MGI
InterPro
InterPro
PMID:16236767 GO_REF:0000002 MGI:3608483 NCBI chr18:44,987,310...45,122,339
Ensembl chr18:44,987,748...45,129,974
JBrowse link
G EXTL3 exostosin like glycosyltransferase 3 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr25:28,788,803...28,833,964
Ensembl chr25:28,790,506...28,937,647
JBrowse link
G GLCE glucuronic acid epimerase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:33,093,318...33,208,754
Ensembl chr30:33,110,947...33,206,095
JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 involved_in ISO (MGI:4438521|PMID:19889634)
(MGI:7276136|PMID:30377379)
MGI PMID:19889634 PMID:30377379 MGI:4438521 MGI:7276136 NCBI chr 6:61,124,393...61,298,912 JBrowse link
G HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 involved_in ISO (MGI:1098372|PMID:9346953)
(MGI:7276136|PMID:30377379)
MGI PMID:9346953 PMID:30377379 MGI:1098372 MGI:7276136 NCBI chr 3:68,306,512...68,336,879 JBrowse link
G HS3ST2 heparan sulfate-glucosamine 3-sulfotransferase 2 involved_in ISO (MGI:7276134|PMID:26731579) MGI PMID:26731579 MGI:7276134 NCBI chr 6:22,814,966...22,905,633
Ensembl chr 6:22,815,738...22,906,537
JBrowse link
G HS3ST3A1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO (MGI:6871814|PMID:34653670) MGI PMID:34653670 MGI:6871814 NCBI chr 5:37,400,144...37,494,154
Ensembl chr 5:37,400,279...37,494,089
JBrowse link
G HS3ST4 heparan sulfate-glucosamine 3-sulfotransferase 4 involved_in ISO (MGI:7276136|PMID:30377379) MGI PMID:30377379 MGI:7276136 NCBI chr 6:20,213,104...20,617,413 JBrowse link
G HS3ST6 heparan sulfate-glucosamine 3-sulfotransferase 6 involved_in ISO (MGI:3579706|PMID:15303968) MGI PMID:15303968 MGI:3579706 NCBI chr 6:38,997,299...39,002,611 JBrowse link
G HS6ST1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3715036|PMID:17405882)
(MGI:2664002|PMID:12611590), (MGI:7276126|PMID:15226404)
(MGI:7276136|PMID:30377379)
MGI PMID:12611590 PMID:15226404 PMID:17405882 PMID:30377379 MGI:2664002 MGI:3715036 MGI:7276126 MGI:7276136 NCBI chr19:22,343,193...22,372,464
Ensembl chr19:22,368,942...22,369,652
JBrowse link
G HS6ST2 heparan sulfate 6-O-sulfotransferase 2 involved_in ISO (MGI:2664002|PMID:12611590), (MGI:7276126|PMID:15226404)
(MGI:7276136|PMID:30377379)
MGI PMID:12611590 PMID:15226404 PMID:30377379 MGI:2664002 MGI:7276126 MGI:7276136 NCBI chr  X:103,529,705...103,816,049
Ensembl chr  X:103,531,378...103,815,538
JBrowse link
G HS6ST3 heparan sulfate 6-O-sulfotransferase 3 involved_in ISO (MGI:2664002|PMID:12611590), (MGI:7276126|PMID:15226404) MGI PMID:12611590 PMID:15226404 MGI:2664002 MGI:7276126 NCBI chr22:47,257,641...47,265,143
Ensembl chr22:47,117,757...47,259,351
JBrowse link
G LIPC lipase C, hepatic type ISO RGD PMID:15102889 RGD:1580511 NCBI chr30:23,432,460...23,584,037
Ensembl chr30:23,432,493...23,584,037
JBrowse link
G LOC489516 heparan sulfate glucosamine 3-O-sulfotransferase 3B1 involved_in ISO (MGI:1860201|PMID:10520990) MGI PMID:10520990 MGI:1860201 NCBI chr 5:38,023,858...38,066,548
Ensembl chr 5:38,023,684...38,065,487
JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in ISO (MGI:3806218|PMID:18487608)
(MGI:6852186|PMID:23846497)
PMID:9915799
(MGI:3805404|PMID:18385133)
(MGI:7276136|PMID:30377379)
MGI
UniProt
PMID:9915799 PMID:18385133 PMID:18487608 PMID:23846497 PMID:30377379 MGI:3805404 MGI:3806218 MGI:6852186 MGI:7276136 RGD:12907548 NCBI chr 4:58,580,231...58,639,750
Ensembl chr 4:58,532,148...58,640,191
JBrowse link
G NDST2 N-deacetylase and N-sulfotransferase 2 acts_upstream_of_or_within
involved_in
ISO (MGI:1343737|PMID:10466727)
(MGI:7276136|PMID:30377379)
(MGI:3806218|PMID:18487608), (MGI:5810238|PMID:27387504), (MGI:65699|PMID:8294485)
MGI PMID:8294485 PMID:10466727 PMID:18487608 PMID:27387504 PMID:30377379 MGI:1343737 MGI:3806218 MGI:5810238 MGI:65699 MGI:7276136 NCBI chr 4:24,235,051...24,243,411
Ensembl chr 4:24,231,492...24,243,455
JBrowse link
G NDST3 N-deacetylase and N-sulfotransferase 3 involved_in ISO (MGI:3805404|PMID:18385133)
(PMID:9915799)
MGI
UniProt
PMID:9915799 PMID:18385133 MGI:3805404 NCBI chr32:37,309,829...37,487,977
Ensembl chr32:37,309,718...37,485,796
JBrowse link
G UGDH UDP-glucose 6-dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:72,935,532...72,964,151
Ensembl chr 3:72,839,920...72,963,208
JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO (MGI:5498591|PMID:23760952) MGI PMID:23760952 MGI:5498591 NCBI chr38:21,822,873...21,824,537 JBrowse link
G XYLT1 xylosyltransferase 1 involved_in ISS
IBA
IEA
(PMID:21873635) UniProt
UniProt
GO_Central
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000041 NCBI chr 6:26,742,853...27,041,666
Ensembl chr 6:26,742,853...27,041,666
JBrowse link
G XYLT2 xylosyltransferase 2 involved_in ISS
IBA
IEA
(PMID:21873635) UniProt
UniProt
GO_Central
Ensembl
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr 9:26,316,812...26,329,333
Ensembl chr 9:26,316,774...26,329,511
JBrowse link
heparan sulfate proteoglycan biosynthetic process, enzymatic modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:61,124,393...61,298,912 JBrowse link
G HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr12:70,137,232...70,387,797
Ensembl chr12:70,140,802...70,388,174
JBrowse link
G HS6ST1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1353793|PMID:10644753)
(PMID:21873635)
MGI
GO_Central
PMID:10644753 PMID:21873635 MGI:1353793 NCBI chr19:22,343,193...22,372,464
Ensembl chr19:22,368,942...22,369,652
JBrowse link
G HS6ST2 heparan sulfate 6-O-sulfotransferase 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1353793|PMID:10644753)
GO_Central
MGI
PMID:10644753 PMID:21873635 MGI:1353793 NCBI chr  X:103,529,705...103,816,049
Ensembl chr  X:103,531,378...103,815,538
JBrowse link
G HS6ST3 heparan sulfate 6-O-sulfotransferase 3 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1353793|PMID:10644753)
(PMID:21873635)
MGI
GO_Central
PMID:10644753 PMID:21873635 MGI:1353793 NCBI chr22:47,257,641...47,265,143
Ensembl chr22:47,117,757...47,259,351
JBrowse link
heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469
JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in ISO (PMID:17761672) BHF-UCL PMID:17761672 NCBI chr18:44,987,310...45,122,339
Ensembl chr18:44,987,748...45,129,974
JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:2150438|PMID:11457822)
GO_Central
Ensembl
MGI
PMID:11457822 PMID:21873635 GO_REF:0000107 MGI:2150438 NCBI chr 6:61,124,393...61,298,912 JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:58,580,231...58,639,750
Ensembl chr 4:58,532,148...58,640,191
JBrowse link
G NDST2 N-deacetylase and N-sulfotransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:24,235,051...24,243,411
Ensembl chr 4:24,231,492...24,243,455
JBrowse link
G NDST3 N-deacetylase and N-sulfotransferase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr32:37,309,829...37,487,977
Ensembl chr32:37,309,718...37,485,796
JBrowse link
G NDST4 N-deacetylase and N-sulfotransferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr32:34,347,865...34,606,763
Ensembl chr32:34,351,162...34,631,039
JBrowse link
heparin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGPT1 angiopoietin 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr13:8,068,920...8,312,090
Ensembl chr13:8,048,205...8,311,618
JBrowse link
G EXT1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
involved_in
acts_upstream_of_or_within_positive_effect
ISO
IEA
(MGI:6406770|PMID:21148566)
(MGI:1888607|PMID:10926768), (MGI:3050709|PMID:15161920), (MGI:3051956|PMID:15177029), (MGI:4360160|PMID:18480751)
(MGI:6406739|PMID:21310272)
MGI
Ensembl
PMID:10926768 PMID:15161920 PMID:15177029 PMID:18480751 PMID:21148566 More... GO_REF:0000107 MGI:1888607 MGI:3050709 MGI:3051956 MGI:4360160 MGI:6406739 MGI:6406770 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469
JBrowse link
G EXT2 exostosin glycosyltransferase 2 acts_upstream_of_or_within ISO (MGI:6406739|PMID:21310272) MGI PMID:21310272 MGI:6406739 NCBI chr18:44,987,310...45,122,339
Ensembl chr18:44,987,748...45,129,974
JBrowse link
G GLCE glucuronic acid epimerase involved_in IEA UniProt GO_REF:0000041 NCBI chr30:33,093,318...33,208,754
Ensembl chr30:33,110,947...33,206,095
JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:58,580,231...58,639,750
Ensembl chr 4:58,532,148...58,640,191
JBrowse link
G NDST2 N-deacetylase and N-sulfotransferase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:24,235,051...24,243,411
Ensembl chr 4:24,231,492...24,243,455
JBrowse link
G NDST3 N-deacetylase and N-sulfotransferase 3 involved_in IEA UniProt GO_REF:0000041 NCBI chr32:37,309,829...37,487,977
Ensembl chr32:37,309,718...37,485,796
JBrowse link
G NDST4 N-deacetylase and N-sulfotransferase 4 involved_in IEA UniProt GO_REF:0000041 NCBI chr32:34,347,865...34,606,763
Ensembl chr32:34,351,162...34,631,039
JBrowse link
G SLC10A7 solute carrier family 10 member 7 involved_in ISO (PMID:30082715)
(MGI:6198941|PMID:30082715)
UniProt PMID:30082715 MGI:6198941 NCBI chr15:44,718,085...44,957,787
Ensembl chr15:44,720,629...44,957,495
JBrowse link
G XYLT2 xylosyltransferase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3713963|PMID:17517600) Ensembl
Ensembl
MGI
PMID:17517600 GO_REF:0000107 MGI:3713963 NCBI chr 9:26,316,812...26,329,333
Ensembl chr 9:26,316,774...26,329,511
JBrowse link
hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC5 ATP binding cassette subfamily C member 5 involved_in ISO (MGI:7262839|PMID:17540771) MGI PMID:17540771 MGI:7262839 NCBI chr34:16,856,624...16,947,844
Ensembl chr34:16,856,633...16,946,422
JBrowse link
G CCND3 cyclin D3 ISO RGD PMID:19276076 RGD:2316018 NCBI chr12:10,593,786...10,688,304
Ensembl chr12:10,594,712...10,600,891
JBrowse link
G HAS1 hyaluronan synthase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1351415|PMID:10617644)
(PMID:21873635)
MGI
GO_Central
PMID:10617644 PMID:21873635 MGI:1351415 NCBI chr 1:105,376,091...105,386,043
Ensembl chr 1:105,376,536...105,385,134
JBrowse link
G HAS2 hyaluronan synthase 2 involved_in IEA
IBA
ISS
(PMID:21873635) UniProt
InterPro
Ensembl
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 NCBI chr13:20,310,946...20,342,647
Ensembl chr13:20,309,872...20,341,636
JBrowse link
G HAS3 hyaluronan synthase 3 acts_upstream_of_or_within
involved_in
ISO
IEA
IBA
(MGI:86804|PMID:9060470)
(PMID:21873635)
MGI
Ensembl
GO_Central
PMID:9060470 PMID:21873635 GO_REF:0000107 MGI:86804 NCBI chr 5:80,520,261...80,530,769
Ensembl chr 5:80,520,261...80,529,434
JBrowse link
G HYAL1 hyaluronidase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr20:39,035,924...39,040,443
Ensembl chr20:39,038,514...39,040,368
JBrowse link
G IL1B interleukin 1 beta involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr17:37,019,329...37,033,388
Ensembl chr17:37,019,329...37,024,458
JBrowse link
IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD1 adenosine monophosphate deaminase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:52,377,411...52,399,525
Ensembl chr17:52,377,402...52,399,520
JBrowse link
G AMPD2 adenosine monophosphate deaminase 2 acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:5506958|PMID:23911318)
(PMID:21873635)
(PMID:23911318)
MGI
GO_Central
PMID:21873635 PMID:23911318 MGI:5506958 NCBI chr 6:42,239,809...42,251,704
Ensembl chr 6:42,210,025...42,251,950
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr21:33,611,637...33,764,862 JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 acts_upstream_of_or_within ISO (MGI:87193|PMID:9133604)
(MGI:5506958|PMID:23911318), (MGI:5512796|PMID:23542464), (MGI:5529149|PMID:23078545)
MGI PMID:9133604 PMID:23078545 PMID:23542464 PMID:23911318 MGI:5506958 MGI:5512796 MGI:5529149 MGI:87193
IMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD1 adenosine monophosphate deaminase 1 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 NCBI chr17:52,377,411...52,399,525
Ensembl chr17:52,377,402...52,399,520
JBrowse link
G AMPD2 adenosine monophosphate deaminase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:42,239,809...42,251,704
Ensembl chr 6:42,210,025...42,251,950
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000041 Ensembl chr21:33,611,637...33,764,862 JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5585332|PMID:24940686) MGI PMID:24940686 MGI:5585332
G APRT adenine phosphoribosyltransferase involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 5:64,563,154...64,565,537
Ensembl chr 5:64,563,192...64,565,445
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:8,551,008...8,643,710
Ensembl chr 2:8,559,319...8,642,533
JBrowse link
inosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within
involved_in
ISO
IBA
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
(PMID:21873635)
(PMID:8894685)
(MGI:3531253|PMID:8663040)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:3640719|PMID:10720488)
MGI
GO_Central
PMID:1618849 PMID:2015347 PMID:7592575 PMID:7731963 PMID:8663040 More... MGI:1095761 MGI:3531253 MGI:3640719 MGI:3808984 MGI:49990 MGI:72798 MGI:76875 MGI:83255 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADA2 adenosine deaminase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:44,883,573...44,912,930
Ensembl chr27:44,884,882...44,912,850
JBrowse link
G ADAL adenosine deaminase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:10,191,019...10,214,089
Ensembl chr30:10,194,606...10,216,875
JBrowse link
G AK1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chr 9:55,539,179...55,548,132
Ensembl chr 9:55,539,260...55,548,132
JBrowse link
keratan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GNT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in ISO (PMID:17690104)
(MGI:6151274|PMID:29625490)
UniProt PMID:17690104 PMID:29625490 MGI:6151274 NCBI chr25:43,287,937...43,293,416 JBrowse link
G B4GALT4 beta-1,4-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:22,903,842...22,920,955
Ensembl chr33:22,904,149...22,920,956
JBrowse link
G CHST1 carbohydrate sulfotransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:43,734,469...43,739,640 JBrowse link
G CHST1 carbohydrate sulfotransferase 1 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr18:43,723,851...43,738,888 JBrowse link
G LOC489707 carbohydrate sulfotransferase 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:75,266,932...75,280,790 JBrowse link
lactosylceramide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B4GALT4 beta-1,4-galactosyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr33:22,903,842...22,920,955
Ensembl chr33:22,904,149...22,920,956
JBrowse link
G B4GALT6 beta-1,4-galactosyltransferase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:57,849,872...57,917,289
Ensembl chr 7:57,849,884...57,914,360
JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSL1 acyl-CoA synthetase long chain family member 1 involved_in ISO
IBA
(PMID:21873635) RGD
GO_Central
PMID:16466685 PMID:21873635 RGD:2312800 NCBI chr16:45,735,675...45,806,235
Ensembl chr16:45,735,703...45,804,970
JBrowse link
G ACSL4 acyl-CoA synthetase long chain family member 4 ISO RGD PMID:16466685 RGD:2312800 NCBI chr  X:82,864,506...82,943,984
Ensembl chr  X:82,866,823...82,916,789
JBrowse link
G ACSL5 acyl-CoA synthetase long chain family member 5 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:16466685 PMID:21873635 RGD:2312800 NCBI chr28:23,437,838...23,478,763
Ensembl chr28:23,440,387...23,478,762
JBrowse link
G ACSL6 acyl-CoA synthetase long chain family member 6 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:16466685 PMID:21873635 RGD:2312800 NCBI chr11:20,226,877...20,284,919
Ensembl chr11:20,227,268...20,285,631
JBrowse link
G DEPDC1B DEP domain containing 1B involved_in IEA UniProt GO_REF:0000104 NCBI chr 2:47,295,970...47,369,234
Ensembl chr 2:47,296,656...47,482,064
JBrowse link
G ELOVL1 ELOVL fatty acid elongase 1 involved_in IEA UniProt
UniProt
GO_REF:0000104 NCBI chr15:16,798,305...16,803,071
Ensembl chr15:16,798,370...16,802,899
JBrowse link
G ELOVL3 ELOVL fatty acid elongase 3 involved_in IEA UniProt GO_REF:0000104 NCBI chr28:14,756,019...14,759,893
Ensembl chr28:14,756,653...14,759,580
JBrowse link
G ELOVL4 ELOVL fatty acid elongase 4 involved_in IEA UniProt
UniProt
GO_REF:0000104 NCBI chr12:40,845,357...40,876,658
Ensembl chr12:40,846,202...40,876,758
JBrowse link
G ELOVL5 ELOVL fatty acid elongase 5 involved_in IEA UniProt
UniProt
GO_REF:0000104 NCBI chr12:20,732,641...20,807,748
Ensembl chr12:20,734,282...20,807,739
JBrowse link
G ELOVL6 ELOVL fatty acid elongase 6 involved_in IEA UniProt
UniProt
GO_REF:0000104 NCBI chr32:30,221,858...30,360,761
Ensembl chr32:30,224,252...30,360,138
JBrowse link
G ELOVL7 ELOVL fatty acid elongase 7 involved_in IEA UniProt GO_REF:0000104 NCBI chr 2:47,406,323...47,482,113
Ensembl chr 2:47,296,656...47,482,064
JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACACA acetyl-CoA carboxylase alpha involved_in IEA UniProt GO_REF:0000041 NCBI chr 9:36,904,204...37,188,096
Ensembl chr 9:36,905,293...37,187,892
JBrowse link
G ACACB acetyl-CoA carboxylase beta involved_in IEA UniProt GO_REF:0000041 NCBI chr26:17,763,531...17,895,319
Ensembl chr26:17,747,362...17,894,400
JBrowse link
mitochondrial acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MPC1 mitochondrial pyruvate carrier 1 acts_upstream_of_or_within ISO (MGI:5428352|PMID:22628558) MGI PMID:22628558 MGI:5428352 NCBI chr 1:54,379,195...54,395,697 JBrowse link
G MPC2 mitochondrial pyruvate carrier 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5428352|PMID:22628558)
(MGI:5576400|PMID:24910426)
Ensembl
MGI
PMID:22628558 PMID:24910426 GO_REF:0000107 MGI:5428352 MGI:5576400 NCBI chr 7:30,544,986...30,574,102
Ensembl chr 7:30,545,152...30,574,080
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 acts_upstream_of_or_within ISO (MGI:3817854|PMID:18586888) MGI PMID:18586888 MGI:3817854 NCBI chr  X:15,338,364...15,354,011
Ensembl chr  X:15,338,202...15,387,458
JBrowse link
N-acetylneuraminate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NANP N-acetylneuraminic acid phosphatase involved_in ISO (PMID:16237198) UniProt PMID:16237198 RGD:8554804 NCBI chr23:1,757,963...1,776,758 JBrowse link
negative regulation of amyloid precursor protein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AATF apoptosis antagonizing transcription factor acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:3028747|PMID:14627703) MGI
Ensembl
Ensembl
PMID:14627703 GO_REF:0000107 MGI:3028747 NCBI chr 9:36,773,313...36,878,752
Ensembl chr 9:36,773,312...36,878,745
JBrowse link
G ABCA7 ATP binding cassette subfamily A member 7 involved_in ISO (MGI:5553242|PMID:18429932) Alzheimers_University_of_Toronto PMID:18429932 MGI:5553242 NCBI chr20:57,668,371...57,684,111
Ensembl chr20:57,667,706...57,677,342
JBrowse link
G AGO2 argonaute RISC catalytic component 2 involved_in ISO PMID:20395292 ARUK-UCL PMID:20395292 RGD:14390059 NCBI chr13:35,169,243...35,230,252
Ensembl chr13:35,180,912...35,268,577
JBrowse link
G BACE2 beta-secretase 2 involved_in ISO (PMID:12801932) UniProt PMID:12801932 NCBI chr31:35,714,003...35,760,686
Ensembl chr31:35,713,149...35,760,681
JBrowse link
G ITM2B integral membrane protein 2B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:3,255,139...3,261,440
Ensembl chr22:3,255,631...3,261,433
JBrowse link
G ITM2C integral membrane protein 2C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:42,829,825...42,842,737
Ensembl chr25:42,829,608...42,883,055
JBrowse link
G MIR144 microRNA mir-144 involved_in ISO (PMID:27329039) ARUK-UCL PMID:27329039 NCBI chr 9:43,031,035...43,031,094
Ensembl chr 9:43,031,035...43,031,094
JBrowse link
G MIR153 microRNA mir-153 involved_in ISO (PMID:21982160) ARUK-UCL PMID:21982160 NCBI chr16:19,932,378...19,932,457
Ensembl chr16:19,932,378...19,932,457
JBrowse link
G MIR17 microRNA mir-17 involved_in ISO (PMID:21982160) ARUK-UCL PMID:21982160 NCBI chr22:42,478,013...42,478,071
Ensembl chr22:42,478,000...42,478,083
JBrowse link
G MIR20A microRNA mir-20a involved_in ISO (PMID:21982160) ARUK-UCL PMID:21982160 NCBI chr22:42,478,462...42,478,520
Ensembl chr22:42,478,462...42,478,520
JBrowse link
G MIR31 microRNA mir-31 involved_in ISO (PMID:32069773) ARUK-UCL PMID:32069773 NCBI chr11:40,904,438...40,904,496
Ensembl chr11:40,904,437...40,904,503
JBrowse link
G MIR323 microRNA mir-323 involved_in ISO (PMID:21982160) ARUK-UCL PMID:21982160 NCBI chr 8:69,257,494...69,257,549
Ensembl chr 8:69,257,479...69,257,564
JBrowse link
G MIR455 microRNA mir-455 involved_in ISO (PMID:31181293) ARUK-UCL PMID:31181293 NCBI chr11:68,461,911...68,461,968
Ensembl chr11:68,461,896...68,461,983
JBrowse link
negative regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 ISO RGD PMID:21325440 RGD:9685453 NCBI chr28:9,181,851...9,311,835
Ensembl chr28:9,211,050...9,323,939
JBrowse link
G FLCN folliculin involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:42,176,093...42,195,718
Ensembl chr 5:42,176,291...42,195,711
JBrowse link
G PARP1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:24289924) ParkinsonsUK-UCL PMID:24289924 NCBI chr 7:38,503,072...38,542,556
Ensembl chr 7:38,503,067...38,542,127
JBrowse link
G PID1 phosphotyrosine interaction domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:41,424,307...41,649,736
Ensembl chr25:41,425,811...41,652,672
JBrowse link
negative regulation of CD4 production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT8 acyl-CoA thioesterase 8 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr24:33,149,415...33,163,086
Ensembl chr24:33,128,290...33,163,050
JBrowse link
negative regulation of elastin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HBEGF heparin binding EGF like growth factor involved_in ISO PMID:12882762 UniProt PMID:12882762 RGD:8554842 NCBI chr 2:35,551,248...35,563,310
Ensembl chr 2:35,551,250...35,563,043
JBrowse link
negative regulation of FasL production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G JAK3 Janus kinase 3 involved_in ISO (MGI:3655405|PMID:9498750) BHF-UCL PMID:9498750 MGI:3655405 NCBI chr20:45,051,135...45,068,445
Ensembl chr20:45,050,526...45,072,805
JBrowse link
negative regulation of glycoprotein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MIR144 microRNA mir-144 acts_upstream_of ISO (PMID:27785072) DIBU PMID:27785072 NCBI chr 9:43,031,035...43,031,094
Ensembl chr 9:43,031,035...43,031,094
JBrowse link
negative regulation of hyaluronan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AP2A1 adaptor related protein complex 2 subunit alpha 1 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 1:106,752,326...106,784,803
Ensembl chr 1:106,751,800...106,784,663
JBrowse link
G B9D2 B9 domain containing 2 involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G CLTC clathrin heavy chain involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 9:34,116,344...34,183,023
Ensembl chr 9:34,116,634...34,182,719
JBrowse link
G SMPD3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5320806|PMID:22383528) Ensembl
Ensembl
MGI
PMID:22383528 GO_REF:0000107 MGI:5320806 NCBI chr 5:81,089,657...81,172,173
Ensembl chr 5:81,142,888...81,172,189
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS AgBase
AgBase
GO_REF:0000024 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
negative regulation of protein glycosylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MGAT4D MGAT4 family member D involved_in ISO (MGI:5887193|PMID:20805325) UniProt PMID:20805325 MGI:5887193 NCBI chr19:2,337,082...2,391,533
Ensembl chr19:2,339,749...2,391,188
JBrowse link
G OGA O-GlcNAcase ISO RGD PMID:16332679 RGD:2305959 NCBI chr28:14,376,824...14,405,409
Ensembl chr28:14,373,452...14,404,541
JBrowse link
negative regulation of proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC2A10 solute carrier family 2 member 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:16550171) Ensembl
Ensembl
ARUK-UCL
PMID:16550171 GO_REF:0000107 NCBI chr24:33,905,099...33,920,604
Ensembl chr24:33,905,203...33,919,454
JBrowse link
O-glycan processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:22,863,861...22,902,232
Ensembl chr14:22,885,720...22,944,206
JBrowse link
G GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 involved_in IEA Ensembl
Ensembl
GO_REF:0000107 NCBI chr 4:55,275,008...55,491,619
Ensembl chr 4:55,277,883...55,491,499
JBrowse link
G GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 involved_in ISO (PMID:18562306) GO_Central PMID:18562306 NCBI chr 4:9,055,753...9,243,741
Ensembl chr 4:8,977,509...9,281,048
JBrowse link
G GXYLT1 glucoside xylosyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:11,754,609...11,810,245
Ensembl chr27:11,765,072...11,807,787
JBrowse link
G GXYLT2 glucoside xylosyltransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:19,184,892...19,253,144
Ensembl chr20:19,188,179...19,253,291
JBrowse link
G POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr15:14,176,932...14,187,181
Ensembl chr15:14,178,357...14,187,161
JBrowse link
G XXYLT1 xyloside xylosyltransferase 1 involved_in ISO (PMID:22117070), (PMID:8982869)
(MGI:5796071|PMID:26414444)
UniProt PMID:8982869 PMID:22117070 PMID:26414444 MGI:5796071 NCBI chr33:30,724,246...30,856,900
Ensembl chr33:30,744,284...31,006,697
JBrowse link
O-glycan processing, core 1 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:22,863,861...22,902,232
Ensembl chr14:22,885,720...22,944,206
JBrowse link
G C1GALT1C1 C1GALT1 specific chaperone 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:92,581,124...92,584,701
Ensembl chr  X:92,581,488...92,582,444
JBrowse link
O-glycan processing, core 2 term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCNT1 glucosaminyl (N-acetyl) transferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:81,985,519...82,017,420 JBrowse link
oligosaccharide-lipid intermediate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG11 ALG11 alpha-1,2-mannosyltransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:149,538...162,206
Ensembl chr22:151,641...162,512
JBrowse link
G ALG2 ALG2 alpha-1,3/1,6-mannosyltransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:56,274,494...56,279,456
Ensembl chr11:56,275,495...56,279,412
JBrowse link
G ALG6 ALG6 alpha-1,3-glucosyltransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:46,717,779...46,784,488
Ensembl chr 5:46,718,786...46,783,809
JBrowse link
G ALG8 ALG8 alpha-1,3-glucosyltransferase involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr21:20,702,969...20,730,181
Ensembl chr21:20,703,031...20,730,197
JBrowse link
poly-N-acetyllactosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr10:62,170,262...62,239,010
Ensembl chr10:62,145,117...62,146,310
Ensembl chr10:62,145,117...62,146,310
JBrowse link
G B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:45,075,146...45,093,480
Ensembl chr20:45,076,403...45,080,942
JBrowse link
G B3GNT4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:7,145,120...7,147,732
Ensembl chr26:7,145,262...7,146,335
JBrowse link
G B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr21:21,693,069...21,694,140
Ensembl chr21:21,692,944...21,694,425
JBrowse link
G B3GNT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:43,287,937...43,293,416 JBrowse link
G B3GNT8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 involved_in ISO (PMID:15620693) HGNC-UCL PMID:15620693 NCBI chr 1:112,576,992...112,579,104 JBrowse link
G B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:82,212,940...82,215,918
Ensembl chr 5:82,212,922...82,214,679
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 acts_upstream_of_or_within ISO (MGI:4819078|PMID:20417617) MGI PMID:20417617 MGI:4819078 NCBI chr24:36,220,973...36,241,482
Ensembl chr24:36,221,189...36,300,804
JBrowse link
G B4GAT1 beta-1,4-glucuronyltransferase 1 NOT|involved_in ISO (PMID:25279697), (PMID:25279699) UniProt PMID:25279697 PMID:25279699 NCBI chr18:50,964,645...50,966,924
Ensembl chr18:50,964,131...50,966,264
JBrowse link
positive regulation of amyloid precursor protein biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA2 ATP binding cassette subfamily A member 2 involved_in ISO (PMID:20704561) ARUK-UCL PMID:20704561 NCBI chr 9:48,610,906...48,630,932
Ensembl chr 9:48,613,996...48,629,857
JBrowse link
G NCSTN nicastrin acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5569714|PMID:23826707) MGI
Ensembl
PMID:23826707 GO_REF:0000107 MGI:5569714 NCBI chr38:21,878,071...21,891,362
Ensembl chr38:21,685,868...21,892,097
JBrowse link
G PAWR pro-apoptotic WT1 regulator acts_upstream_of_or_within ISO (MGI:3028747|PMID:14627703) MGI PMID:14627703 MGI:3028747 NCBI chr15:22,114,014...22,159,287 JBrowse link
G SOAT1 sterol O-acyltransferase 1 involved_in ISO (PMID:17412327) BHF-UCL PMID:17412327 NCBI chr 7:20,481,386...20,556,706
Ensembl chr 7:20,486,069...20,546,055
JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355
JBrowse link
G ENO1 enolase 1 involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chr 5:62,300,805...62,314,508
Ensembl chr 5:62,300,808...62,304,093
JBrowse link
G HNF1A HNF1 homeobox A ISO RGD PMID:20841353 RGD:150540305 NCBI chr26:16,805,690...16,826,065
Ensembl chr26:16,805,690...16,824,790