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ONTOLOGY REPORT - ANNOTATIONS


Term:carbohydrate derivative catabolic process
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Accession:GO:1901136 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative.
Synonyms:exact_synonym: carbohydrate derivative breakdown;   carbohydrate derivative catabolism;   carbohydrate derivative degradation


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acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) UniProt PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada2 adenosine deaminase 2 ISO (PMID:20147294) UniProtKB PMID:20147294 NCBI chrNW_004936807:232,851...262,593 JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chrNW_004936905:586,160...616,490 JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5'-nucleotidase ecto ISO (MGI:MGI:3770326|PMID:16547283) RGD
MGI
PMID:16547283, PMID:21414400 MGI:MGI:3770326, RGD:5134346 NCBI chrNW_004936510:5,797,218...5,846,118 JBrowse link
beta-glucoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta ISO RGD PMID:3932339 RGD:12791012 NCBI chrNW_004936580:4,715,869...4,720,752 JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde4d phosphodiesterase 4D ISO (PMID:20819076) BHF-UCL PMID:20819076 NCBI chrNW_004936480:8,123,437...9,235,586 JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde1a phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chrNW_004936509:10,819,067...11,142,964 JBrowse link
G Pde2a phosphodiesterase 2A ISO (MGI:MGI:4420377|PMID:19632989)
(PMID:19828435)
UniProtKB PMID:19632989, PMID:19828435 MGI:MGI:4420377 NCBI chrNW_004936498:1,856,256...1,944,405 JBrowse link
G Pde5a phosphodiesterase 5A ISO (MGI:MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:MGI:2450821 NCBI chrNW_004936869:24,265...117,120 JBrowse link
G Pde9a phosphodiesterase 9A ISO (PMID:25799991)
(MGI:MGI:5634842|PMID:25799991)
(MGI:MGI:1266874|PMID:9624145)
UniProtKB PMID:9624145, PMID:25799991 MGI:MGI:1266874, MGI:MGI:5634842 NCBI chrNW_004936500:1,201,843...1,266,818 JBrowse link
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chit1 chitinase 1 ISO (PMID:19725875) UniProtKB PMID:19725875 NCBI chrNW_004936567:1,373,727...1,385,694 JBrowse link
G Ctbs chitobiase ISO RGD PMID:2751306 RGD:2301430 NCBI chrNW_004936608:1,048,696...1,064,383 JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970770 hyaluronidase-4 ISO (MGI:MGI:5490850|PMID:23086929) MGI PMID:23086929 MGI:MGI:5490850 NCBI chrNW_004936605:1,645,204...1,666,510 JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) MGI PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase ISO (MGI:MGI:2656023|PMID:12692563) UniProtKB PMID:12692563 MGI:MGI:2656023 NCBI chrNW_004936870:25,039...34,601 JBrowse link
G Cda cytidine deaminase ISO (PMID:9596658) RGD
UniProtKB
PMID:675715, PMID:9596658 RGD:2316616 NCBI chrNW_004936474:6,543,295...6,564,575 JBrowse link
G Cdadc1 cytidine and dCMP deaminase domain containing 1 ISO (PMID:26945630) UniProtKB PMID:26945630 NCBI chrNW_004936565:2,336,613...2,395,816 JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chrNW_004936555:5,929,262...5,932,334 JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix hydrolase 1 ISO (PMID:10373420) UniProtKB PMID:10373420 NCBI chrNW_004936823:7,104...22,083 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:24141705)
(MGI:MGI:5828027|PMID:27920203)
UniProtKB
MGI
PMID:24141705, PMID:27920203 MGI:MGI:5828027 NCBI chrNW_004936561:4,180,607...4,238,623 JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chrNW_004936501:12,880,745...12,884,240 JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase ISO (PMID:9226884) UniProtKB PMID:9226884 NCBI chrNW_004936587:1,555,534...1,665,217 JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic ISO (MGI:MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:MGI:1353788 NCBI chrNW_004936594:430,274...432,027 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:23601106), (PMID:26294762) UniProtKB PMID:23601106, PMID:26294762 NCBI chrNW_004936561:4,180,607...4,238,623 JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase ISO (PMID:24036510)
(MGI:MGI:4397742|PMID:19834056)
(MGI:MGI:4414887|PMID:19751987)
UniProtKB
MGI
PMID:19751987, PMID:19834056, PMID:24036510 MGI:MGI:4397742, MGI:MGI:4414887 NCBI chrNW_004936477:22,200,471...22,215,473 JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chrNW_004936555:5,929,262...5,932,334 JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix hydrolase 1 ISO (PMID:10373420), (PMID:22556419)
(MGI:MGI:77076|PMID:7592783)
UniProtKB
MGI
PMID:7592783, PMID:10373420, PMID:22556419 MGI:MGI:77076 NCBI chrNW_004936823:7,104...22,083 JBrowse link
G Nudt15 nudix hydrolase 15 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chrNW_004936565:1,380,981...1,389,908 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:24217394) UniProtKB PMID:24217394 NCBI chrNW_004936561:4,180,607...4,238,623 JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965734 U8 snoRNA-decapping enzyme ISO (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chrNW_004936529:4,825,277...4,827,011 JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 NOT ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chrNW_004936501:12,880,745...12,884,240 JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5m 5',3'-nucleotidase, mitochondrial ISO (MGI:MGI:2388903|PMID:12234672) MGI PMID:12234672 MGI:MGI:2388903 NCBI chrNW_004936741:950,681...999,290 JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dut deoxyuridine triphosphatase ISO RGD PMID:1315924, PMID:3032103 RGD:2300191, RGD:2301218 NCBI chrNW_004936471:10,670,604...10,681,356 JBrowse link
elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela1 chymotrypsin like elastase 1 ISO (MGI:MGI:5641427|PMID:24793170) MGI PMID:24793170 MGI:MGI:5641427 NCBI chrNW_004936512:8,901,674...8,919,819 JBrowse link
G Ctsl cathepsin L ISO (MGI:MGI:6259330|PMID:12417635) UniProt PMID:12417635 MGI:MGI:6259330 NCBI chrNW_004936680:3,047,355...3,050,640 JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO (PMID:29101312) ARUK-UCL PMID:29101312 NCBI chrNW_004936551:5,107,567...5,117,843 JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galc galactosylceramidase ISO (MGI:MGI:78941|PMID:8769874)
(PMID:8399327)
(MGI:MGI:2183819|PMID:11371512)
UniProtKB
UniProt
MGI
PMID:8399327, PMID:8769874, PMID:11371512 MGI:MGI:2183819, MGI:MGI:78941 NCBI chrNW_004936488:15,444,184...15,519,395 JBrowse link
G Psap prosaposin ISO (MGI:MGI:2183819|PMID:11371512) MGI PMID:11371512 MGI:MGI:2183819 NCBI chrNW_004936521:6,975,844...7,009,460 JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gm2a GM2 ganglioside activator ISO (MGI:MGI:894862|PMID:9223328) MGI PMID:9223328 MGI:MGI:894862 NCBI chrNW_004936647:4,126,524...4,140,800 JBrowse link
G Hexa hexosaminidase subunit alpha ISO (MGI:MGI:1271008|PMID:9645704), (MGI:MGI:78473|PMID:8789434)
(PMID:8123671), (PMID:8672428), (PMID:9694901)
(MGI:MGI:69059|PMID:7937929), (MGI:MGI:894862|PMID:9223328)
MGI
UniProt
PMID:7937929, PMID:8123671, PMID:8672428, PMID:8789434, PMID:9223328, PMID:9645704, PMID:9694901 MGI:MGI:1271008, MGI:MGI:69059, MGI:MGI:78473, MGI:MGI:894862 NCBI chrNW_004936471:31,712,485...31,738,273 JBrowse link
G Hexb hexosaminidase subunit beta ISO (MGI:MGI:76816|PMID:8566348)
(PMID:8123671), (PMID:8672428)
(MGI:MGI:1331265|PMID:10021458), (MGI:MGI:2670850|PMID:12756243), (MGI:MGI:3041658|PMID:12657883), (MGI:MGI:3573807|PMID:15748167), (MGI:MGI:894862|PMID:9223328)
(MGI:MGI:1271008|PMID:9645704), (MGI:MGI:78473|PMID:8789434)
MGI
UniProt
PMID:8123671, PMID:8566348, PMID:8672428, PMID:8789434, PMID:9223328, PMID:9645704, PMID:10021458, PMID:12657883, PMID:12756243, PMID:15748167 MGI:MGI:1271008, MGI:MGI:1331265, MGI:MGI:2670850, MGI:MGI:3041658, MGI:MGI:3573807, MGI:MGI:76816, MGI:MGI:78473, MGI:MGI:894862 NCBI chrNW_004936549:1,918,482...1,943,665 JBrowse link
G Neu2 neuraminidase 2 ISO (PMID:14613940), (PMID:22228546)
(MGI:MGI:1354405|PMID:10713120)
UniProt PMID:10713120, PMID:14613940, PMID:22228546 MGI:MGI:1354405 NCBI chrNW_004936525:4,177,085...4,179,692 JBrowse link
G Neu3 neuraminidase 3 ISO (PMID:10861246), (PMID:11298736), (PMID:15847605), (PMID:17334392)
(MGI:MGI:3765376|PMID:17708748)
UniProt PMID:10861246, PMID:11298736, PMID:15847605, PMID:17334392, PMID:17708748 MGI:MGI:3765376 NCBI chrNW_004936498:3,897,511...3,915,013 JBrowse link
G Neu4 neuraminidase 4 ISO (PMID:15213228), (PMID:15847605)
(MGI:MGI:4361102|PMID:19506080)
UniProt PMID:15213228, PMID:15847605, PMID:19506080 MGI:MGI:4361102 NCBI chrNW_004936745:172,983...175,470 JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chrNW_004936555:5,929,262...5,932,334 JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 ISO (PMID:9438414) UniProtKB PMID:9438414 NCBI chrNW_004936504:12,181,544...12,192,596 JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta ISO (MGI:MGI:6271235|PMID:24211208)
(PMID:19279011), (PMID:21700325), (PMID:24022302)
(MGI:MGI:5141165|PMID:21700325), (MGI:MGI:5501380|PMID:23707074)
(PMID:16293621), (PMID:24211208), (PMID:9201993)
UniProt
BHF-UCL
ParkinsonsUK-UCL
PMID:9201993, PMID:16293621, PMID:19279011, PMID:21700325, PMID:23707074, PMID:24022302, PMID:24211208 MGI:MGI:5141165, MGI:MGI:5501380, MGI:MGI:6271235 NCBI chrNW_004936580:4,715,869...4,720,752 JBrowse link
G Gba2 glucosylceramidase beta 2 ISO (PMID:17080196)
(PMID:30308956)
(MGI:MGI:3690511|PMID:17080196)
(MGI:MGI:5484792|PMID:23250757)
UniProt PMID:17080196, PMID:23250757, PMID:30308956 MGI:MGI:3690511, MGI:MGI:5484792 NCBI chrNW_004936524:3,730,833...3,742,526 JBrowse link
glucuronoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd10 abhydrolase domain containing 10, depalmitoylase ISO (PMID:22294686) BHF-UCL PMID:22294686 NCBI chrNW_004936834:794,006...805,758 JBrowse link
G Gusb glucuronidase beta ISO (MGI:MGI:4414887|PMID:19751987) MGI PMID:19751987 MGI:MGI:4414887 NCBI chrNW_004936543:7,721,273...7,732,468 JBrowse link
glycolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naga alpha-N-acetylgalactosaminidase ISO (PMID:9741689) UniProtKB PMID:9741689 NCBI chrNW_004936718:31,946...55,822 JBrowse link
glycoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ISO (MGI:MGI:3654428|PMID:16431915) MGI PMID:16431915 MGI:MGI:3654428 NCBI chrNW_004936481:5,352,964...5,424,944 JBrowse link
G Fbxo2 F-box protein 2 ISO (MGI:MGI:3573989|PMID:15723043), (MGI:MGI:4821082|PMID:12140560) MGI PMID:12140560, PMID:15723043 MGI:MGI:3573989, MGI:MGI:4821082 NCBI chrNW_004936474:521,235...526,151 JBrowse link
G Fbxo6 F-box protein 6 ISO (MGI:MGI:3573989|PMID:15723043) MGI PMID:15723043 MGI:MGI:3573989 NCBI chrNW_004936474:531,873...538,596 JBrowse link
G Manba mannosidase beta ISO (MGI:MGI:3615066|PMID:16377659), (MGI:MGI:57603|PMID:3447593) UniProt PMID:3447593, PMID:16377659 MGI:MGI:3615066, MGI:MGI:57603 NCBI chrNW_004936520:616,762...715,010 JBrowse link
G Neu2 neuraminidase 2 ISO (PMID:14613940) UniProt PMID:14613940 NCBI chrNW_004936525:4,177,085...4,179,692 JBrowse link
G Neu4 neuraminidase 4 ISO (PMID:15213228), (PMID:15847605)
(MGI:MGI:4361102|PMID:19506080), (MGI:MGI:5427293|PMID:22393058)
UniProt PMID:15213228, PMID:15847605, PMID:19506080, PMID:22393058 MGI:MGI:4361102, MGI:MGI:5427293 NCBI chrNW_004936745:172,983...175,470 JBrowse link
G Ngly1 N-glycanase 1 ISO (MGI:MGI:3054122|PMID:15358861)
(PMID:15358861)
UniProtKB PMID:15358861 MGI:MGI:3054122 NCBI chrNW_004936473:17,243,763...17,294,609 JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B ISO (PMID:22607976) UniProtKB PMID:22607976 NCBI chrNW_004936473:22,197,625...22,288,941 JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal2 hyaluronidase 2 ISO (PMID:9712871) UniProtKB PMID:9712871 NCBI chrNW_004936529:1,845,445...1,851,106 JBrowse link
G Ids iduronate 2-sulfatase ISO (PMID:28593992) UniProt PMID:28593992 NCBI chrNW_004936513:62,966...88,844 JBrowse link
G Idua alpha-L-iduronidase ISO (MGI:MGI:3697540|PMID:16979922)
(MGI:MGI:4414887|PMID:19751987)
(MGI:MGI:4397742|PMID:19834056)
(MGI:MGI:3697540|PMID:16979922), (MGI:MGI:5448924|PMID:22580166)
(MGI:MGI:5295514|PMID:21873421)
MGI
RGD
PMID:6138357, PMID:16979922, PMID:19751987, PMID:19834056, PMID:21873421, PMID:22580166 MGI:MGI:3697540, MGI:MGI:4397742, MGI:MGI:4414887, MGI:MGI:5295514, MGI:MGI:5448924, RGD:1599427 NCBI chrNW_004936477:22,200,471...22,215,473 JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 ISO (MGI:MGI:2135409|PMID:11278811) MGI PMID:11278811 MGI:MGI:2135409 NCBI chrNW_004936528:7,788,560...7,802,821 JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase ISO (PMID:15146460), (PMID:7493035) UniProtKB PMID:7493035, PMID:15146460 NCBI chrNW_004936594:4,195,217...4,203,802 JBrowse link
glycoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuca1 alpha-L-fucosidase 1 ISO (PMID:19666478) UniProtKB PMID:19666478 NCBI chrNW_004936474:8,995,525...9,012,396 JBrowse link
G Fuca2 alpha-L-fucosidase 2 ISO (PMID:19666478) UniProtKB PMID:19666478 NCBI chrNW_004936625:2,636,136...2,653,328 JBrowse link
G Gba2 glucosylceramidase beta 2 ISO (PMID:17105727) UniProtKB PMID:17105727 NCBI chrNW_004936524:3,730,833...3,742,526 JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha ISO (PMID:8804427)
(PMID:10838196)
UniProt PMID:8804427, PMID:10838196 NCBI chrNW_004936813:474,938...484,753 JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha ISO (MGI:MGI:1860035|PMID:10840053), (MGI:MGI:3525994|PMID:15629890)
(MGI:MGI:1859538|PMID:10841515), (MGI:MGI:2155538|PMID:11752062), (MGI:MGI:86774|PMID:9122231)
MGI PMID:9122231, PMID:10840053, PMID:10841515, PMID:11752062, PMID:15629890 MGI:MGI:1859538, MGI:MGI:1860035, MGI:MGI:2155538, MGI:MGI:3525994, MGI:MGI:86774 NCBI chrNW_004936813:474,938...484,753 JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO (PMID:19527031) UniProtKB PMID:19527031 NCBI chrNW_004936691:650,753...694,362 JBrowse link
G Prtfdc1 phosphoribosyl transferase domain containing 1 NOT ISO (PMID:21054786) UniProtKB PMID:21054786 NCBI chrNW_004936484:568,056...650,820 JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc1 glypican 1 ISO (PMID:12732622) UniProtKB PMID:12732622 NCBI chrNW_004936745:1,118,732...1,127,169 JBrowse link
G Hpse heparanase ISO (PMID:12213822) UniProtKB PMID:12213822 NCBI chrNW_004936738:1,308,350...1,341,421 JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase ISO (PMID:15146460) UniProtKB PMID:15146460 NCBI chrNW_004936594:4,195,217...4,203,802 JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase ISO (MGI:MGI:4414887|PMID:19751987)
(MGI:MGI:4397742|PMID:19834056)
(MGI:MGI:5295514|PMID:21873421)
(PMID:21873421)
MGI PMID:19751987, PMID:19834056, PMID:21873421 MGI:MGI:4397742, MGI:MGI:4414887, MGI:MGI:5295514 NCBI chrNW_004936477:22,200,471...22,215,473 JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (Indian blood group) ISO (PMID:17170110) UniProtKB PMID:17170110 NCBI chrNW_004936533:2,949,026...3,033,166 JBrowse link
G Cemip cell migration inducing hyaluronidase 1 ISO (PMID:23509262)
(MGI:MGI:5545862|PMID:24251095)
UniProtKB PMID:23509262, PMID:24251095 MGI:MGI:5545862 NCBI chrNW_004936483:19,721,256...19,799,371 JBrowse link
G Cemip2 cell migration inducing hyaluronidase 2 ISO (PMID:28246172) UniProtKB PMID:28246172 NCBI chrNW_004936503:7,750,353...7,826,408 JBrowse link
G Fgf2 fibroblast growth factor 2 ISO (PMID:19577615) UniProtKB PMID:19577615 NCBI chrNW_004936662:1,886,176...1,928,998 JBrowse link
G Hyal1 hyaluronidase 1 ISO (PMID:11296287), (PMID:12084718), (PMID:17170110), (PMID:20473947), (PMID:21695196), (PMID:21699545), (PMID:21829529) UniProtKB PMID:11296287, PMID:12084718, PMID:17170110, PMID:20473947, PMID:21695196, PMID:21699545, PMID:21829529 NCBI chrNW_004936529:1,838,212...1,842,399 JBrowse link
G Hyal2 hyaluronidase 2 ISO PMID:19635555
(PMID:17170110), (PMID:19443707), (PMID:20554532), (PMID:21699545)
UniProt
UniProtKB
PMID:17170110, PMID:19443707, PMID:19635555, PMID:20554532, PMID:21699545 RGD:8553259 NCBI chrNW_004936529:1,845,445...1,851,106 JBrowse link
G Hyal3 hyaluronidase 3 ISO (PMID:12084718), (PMID:21699545)
(MGI:MGI:4834982|PMID:20586096)
UniProtKB PMID:12084718, PMID:20586096, PMID:21699545 MGI:MGI:4834982 NCBI chrNW_004936529:1,831,639...1,837,314 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:17324121) UniProtKB PMID:17324121 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965734 U8 snoRNA-decapping enzyme ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chrNW_004936529:4,825,277...4,827,011 JBrowse link
G Nudt9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chrNW_004936905:586,160...616,490 JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnp purine nucleoside phosphorylase ISO (PMID:16964310) MGI PMID:16964310 NCBI chrNW_004936877:686,539...692,832 JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpa inosine triphosphatase ISO (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chrNW_004936485:15,499,688...15,511,992 JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gns glucosamine (N-acetyl)-6-sulfatase ISO RGD PMID:3161730 RGD:1600571 NCBI chrNW_004936545:2,974,627...3,010,586 JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase ISO (PMID:1883828), (PMID:29343645) UniProtKB PMID:1883828, PMID:29343645 NCBI chrNW_004936478:11,971,103...12,174,489 JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlycd malonyl-CoA decarboxylase ISO (PMID:10417274), (PMID:10455107), (PMID:15003260)
(MGI:MGI:5501374|PMID:23746352)
UniProtKB PMID:10417274, PMID:10455107, PMID:15003260, PMID:23746352 MGI:MGI:5501374 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004936577:4,486,617...4,516,379 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004936561:5,578,267...5,605,512 JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ISO (MGI:MGI:3654428|PMID:16431915)
(PMID:25092655)
ParkinsonsUK-UCL PMID:16431915, PMID:25092655 MGI:MGI:3654428 NCBI chrNW_004936481:5,352,964...5,424,944 JBrowse link
G Man1b1 mannosidase alpha class 1B member 1 ISO (PMID:18003979), (PMID:21062743) ParkinsonsUK-UCL PMID:18003979, PMID:21062743 NCBI chrNW_004936669:855,349...867,763 JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtap methylthioadenosine phosphorylase NOT ISO (PMID:19001417) UniProtKB PMID:19001417 NCBI chrNW_004936652:3,431,588...3,468,770 JBrowse link
G Pnp purine nucleoside phosphorylase ISO (PMID:19001417) UniProtKB PMID:19001417 NCBI chrNW_004936877:686,539...692,832 JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C delta ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004936473:3,892,625...3,923,467 JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 ISO (PMID:17895370) BHF-UCL PMID:17895370 NCBI chrNW_004936518:7,180,262...7,483,416 JBrowse link
purine ribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 ISO (PMID:22995898) UniProtKB PMID:22995898 NCBI chrNW_004936476:14,188,328...14,204,063 JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hint1 histidine triad nucleotide binding protein 1 ISO (PMID:16835243) UniProtKB PMID:16835243 NCBI chrNW_004936647:3,843,544...3,849,428 JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic ISO (PMID:10681516) UniProtKB PMID:10681516 NCBI chrNW_004936594:430,274...432,027 JBrowse link
pyrimidine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 ISO (PMID:22525402) UniProt PMID:22525402 NCBI chrNW_004936619:668,380...713,720 JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO (MGI:MGI:2183618|PMID:12023972) MGI
RGD
PMID:11741948, PMID:12023972 MGI:MGI:2183618, RGD:730275 NCBI chrNW_004936561:6,314,797...6,333,961 JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase ISO (PMID:1512248) UniProtKB PMID:1512248 NCBI chrNW_004936537:1,660,461...2,439,305 JBrowse link
ubiquitin-dependent glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (PMID:21062743), (PMID:25092655) ParkinsonsUK-UCL PMID:21062743, PMID:25092655 NCBI chrNW_004936577:4,486,617...4,516,379 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:15537790) ParkinsonsUK-UCL PMID:15537790 NCBI chrNW_004936561:5,578,267...5,605,512 JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 ISO (PMID:9556635) UniProtKB PMID:9556635 NCBI chrNW_004936555:6,896,661...6,920,333 JBrowse link
UDP-glucose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galt galactose-1-phosphate uridylyltransferase ISO RGD PMID:8255669 RGD:1598677 NCBI chrNW_004936524:2,726,795...2,730,049 JBrowse link
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:51667|PMID:1421759) MGI PMID:1421759 MGI:MGI:51667 NCBI chrNW_004936826:344,452...364,929 JBrowse link
uridine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upp1 uridine phosphorylase 1 ISO (PMID:7488099)
(MGI:MGI:5476603|PMID:23355744), (MGI:MGI:73237|PMID:7744869)
UniProt PMID:7488099, PMID:7744869, PMID:23355744 MGI:MGI:5476603, MGI:MGI:73237 NCBI chrNW_004936478:22,508,602...22,531,604 JBrowse link
G Upp2 uridine phosphorylase 2 ISO (PMID:12849978), (PMID:21855639)
(MGI:MGI:2683856|PMID:14715930)
UniProt PMID:12849978, PMID:14715930, PMID:21855639 MGI:MGI:2683856 NCBI chrNW_004936469:20,465,767...20,513,084 JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 ISO (PMID:23671276) UniProtKB PMID:23671276 NCBI chrNW_004936809:615,133...634,618 JBrowse link
XDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101965734 U8 snoRNA-decapping enzyme ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chrNW_004936529:4,825,277...4,827,011 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11968
    metabolic process 7653
      organic substance metabolic process 7353
        carbohydrate derivative metabolic process 690
          carbohydrate derivative catabolic process 91
            1,6-anhydro-N-acetyl-beta-muramic acid catabolic process 0
            1-deoxy-D-xylulose 5-phosphate catabolic process 0
            6-sulfoquinovose(1-) catabolic process + 0
            D-ribose 5-phosphate catabolic process 0
            D-tagatose 6-phosphate catabolic process 0
            amino disaccharide catabolic process + 0
            amino sugar catabolic process + 4
            aminoglycan catabolic process + 16
            amylopectin catabolic process + 0
            deoxyribonucleotide catabolic process + 9
            deoxyribose phosphate catabolic process + 9
            glyceraldehyde-3-phosphate catabolic process 0
            glycerol-3-phosphate catabolic process 0
            glycolipid catabolic process + 13
            glycopeptide catabolic process 0
            glycoprotein catabolic process + 18
            glycosyl compound catabolic process + 22
            lipooligosaccharide catabolic process 0
            lipopolysaccharide catabolic process 1
            nucleotide-sugar catabolic process + 2
            ribonucleotide catabolic process + 19
            teichoic acid catabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.