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ONTOLOGY REPORT - ANNOTATIONS


Term:carbohydrate derivative catabolic process
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Accession:GO:1901136 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of carbohydrate derivative.
Synonyms:exact_synonym: carbohydrate derivative breakdown;   carbohydrate derivative catabolism;   carbohydrate derivative degradation


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acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004955412:10,350,088...10,369,806 JBrowse link
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) UniProt PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chrNW_004955522:945,186...960,094 JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO (MGI:MGI:1095761|PMID:9272950), (MGI:MGI:3531253|PMID:8663040), (MGI:MGI:3808984|PMID:2015347), (MGI:MGI:4835158|PMID:8672487), (MGI:MGI:49990|PMID:1618849), (MGI:MGI:59127|PMID:2387582), (MGI:MGI:76875|PMID:7592575), (MGI:MGI:83255|PMID:8894685)
(MGI:MGI:2151677|PMID:11591798), (MGI:MGI:3531253|PMID:8663040)
(MGI:MGI:1095761|PMID:9272950), (MGI:MGI:72798|PMID:7731963)
(MGI:MGI:74163|PMID:7670465)
(MGI:MGI:1861066|PMID:10899903), (MGI:MGI:2155238|PMID:9478961), (MGI:MGI:3525377|PMID:15630442), (MGI:MGI:3619310|PMID:14607964), (MGI:MGI:3640719|PMID:10720488), (MGI:MGI:3664521|PMID:16841096), (MGI:MGI:3794903|PMID:18340377)
(PMID:16670267), (PMID:8894685)
MGI PMID:1618849, PMID:2015347, PMID:2387582, PMID:7592575, PMID:7670465, PMID:7731963, PMID:8663040, PMID:8672487, PMID:8894685, PMID:9272950, PMID:9478961, PMID:10720488, PMID:10899903, PMID:11591798, PMID:14607964, PMID:15630442, PMID:16670267, PMID:16841096, PMID:18340377 MGI:MGI:1095761, MGI:MGI:1861066, MGI:MGI:2151677, MGI:MGI:2155238, MGI:MGI:3525377, MGI:MGI:3531253, MGI:MGI:3619310, MGI:MGI:3640719, MGI:MGI:3664521, MGI:MGI:3794903, MGI:MGI:3808984, MGI:MGI:4835158, MGI:MGI:49990, MGI:MGI:59127, MGI:MGI:72798, MGI:MGI:74163, MGI:MGI:76875, MGI:MGI:83255 NCBI chrNW_004955445:12,696,096...12,717,488 JBrowse link
G Ada2 adenosine deaminase 2 ISO (PMID:20147294) UniProtKB PMID:20147294 NCBI chrNW_004955454:5,341,822...5,355,383 JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chrNW_004955474:2,402,400...2,438,145 JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5'-nucleotidase ecto ISO (MGI:MGI:3770326|PMID:16547283) RGD
MGI
PMID:16547283, PMID:21414400 MGI:MGI:3770326, RGD:5134346 NCBI chrNW_004955411:12,891,236...12,946,324 JBrowse link
beta-glucoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta ISO RGD PMID:3932339 RGD:12791012 NCBI chrNW_004955545:1,682,097...1,689,373 JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chrNW_004955522:945,186...960,094 JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde4d phosphodiesterase 4D ISO (PMID:20819076) BHF-UCL PMID:20819076 NCBI chrNW_004955446:7,914,326...9,252,527 JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde1a phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chrNW_004955403:14,906,069...15,202,710 JBrowse link
G Pde2a phosphodiesterase 2A ISO (MGI:MGI:4420377|PMID:19632989)
(PMID:19828435)
UniProtKB PMID:19632989, PMID:19828435 MGI:MGI:4420377 NCBI chrNW_004955414:18,765,591...18,826,717 JBrowse link
G Pde5a phosphodiesterase 5A ISO (MGI:MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:MGI:2450821 NCBI chrNW_004955428:20,785,497...20,904,717 JBrowse link
G Pde9a phosphodiesterase 9A ISO (MGI:MGI:5634842|PMID:25799991)
(PMID:25799991)
(MGI:MGI:1266874|PMID:9624145)
UniProtKB PMID:9624145, PMID:25799991 MGI:MGI:1266874, MGI:MGI:5634842 NCBI chrNW_004955407:39,090,718...39,165,363 JBrowse link
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chit1 chitinase 1 ISO (PMID:19725875) UniProtKB PMID:19725875 NCBI chrNW_004955406:39,229,161...39,253,328 JBrowse link
G Ctbs chitobiase ISO RGD PMID:2751306 RGD:2301430 NCBI chrNW_004955423:9,327,945...9,343,923 JBrowse link
chondroitin sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal4 hyaluronidase 4 ISO (MGI:MGI:5490850|PMID:23086929) MGI PMID:23086929 MGI:MGI:5490850 NCBI chrNW_004955479:5,355,667...5,364,092 JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:2137102|PMID:11415433), (MGI:MGI:6450264|PMID:18799520) MGI PMID:11415433, PMID:18799520 MGI:MGI:2137102, MGI:MGI:6450264 NCBI chrNW_004955522:945,186...960,094 JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cda cytidine deaminase ISO (PMID:9596658) RGD
UniProtKB
PMID:675715, PMID:9596658 RGD:2316616 NCBI chrNW_004955452:1,131,968...1,156,777 JBrowse link
G Cdadc1 cytidine and dCMP deaminase domain containing 1 ISO (PMID:26945630) UniProtKB PMID:26945630 NCBI chrNW_004955431:2,724,988...2,767,539 JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chrNW_004955403:45,598,813...45,601,940 JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO (MGI:MGI:76875|PMID:7592575)
(MGI:MGI:72798|PMID:7731963)
(MGI:MGI:2155238|PMID:9478961), (MGI:MGI:3619310|PMID:14607964)
(MGI:MGI:74163|PMID:7670465)
MGI PMID:7592575, PMID:7670465, PMID:7731963, PMID:9478961, PMID:14607964 MGI:MGI:2155238, MGI:MGI:3619310, MGI:MGI:72798, MGI:MGI:74163, MGI:MGI:76875 NCBI chrNW_004955445:12,696,096...12,717,488 JBrowse link
G Nudt1 nudix hydrolase 1 ISO (PMID:10373420) UniProtKB PMID:10373420 NCBI chrNW_004955460:9,678,270...9,689,106 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:24141705)
(MGI:MGI:5828027|PMID:27920203)
UniProtKB
MGI
PMID:24141705, PMID:27920203 MGI:MGI:5828027 NCBI chrNW_004955422:24,714,103...24,780,672 JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chrNW_004955493:7,357,204...7,360,034 JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase ISO (MGI:MGI:76875|PMID:7592575)
(MGI:MGI:1095761|PMID:9272950), (MGI:MGI:72798|PMID:7731963)
(MGI:MGI:74163|PMID:7670465)
(MGI:MGI:2155238|PMID:9478961), (MGI:MGI:3619310|PMID:14607964), (MGI:MGI:3640719|PMID:10720488)
MGI PMID:7592575, PMID:7670465, PMID:7731963, PMID:9272950, PMID:9478961, PMID:10720488, PMID:14607964 MGI:MGI:1095761, MGI:MGI:2155238, MGI:MGI:3619310, MGI:MGI:3640719, MGI:MGI:72798, MGI:MGI:74163, MGI:MGI:76875 NCBI chrNW_004955445:12,696,096...12,717,488 JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase ISO (PMID:9226884) UniProtKB PMID:9226884 NCBI chrNW_004955413:12,571,341...12,682,985 JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic ISO (MGI:MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:MGI:1353788 NCBI chrNW_004955553:2,011,549...2,014,209 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:23601106), (PMID:26294762) UniProtKB PMID:23601106, PMID:26294762 NCBI chrNW_004955422:24,714,103...24,780,672 JBrowse link
dermatan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase ISO (PMID:24036510)
(MGI:MGI:4414887|PMID:19751987)
(MGI:MGI:4397742|PMID:19834056)
UniProtKB
MGI
PMID:19751987, PMID:19834056, PMID:24036510 MGI:MGI:4397742, MGI:MGI:4414887 NCBI chrNW_004955514:474,830...488,007 JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chrNW_004955403:45,598,813...45,601,940 JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix hydrolase 1 ISO (MGI:MGI:77076|PMID:7592783)
(PMID:10373420), (PMID:22556419)
MGI
UniProtKB
PMID:7592783, PMID:10373420, PMID:22556419 MGI:MGI:77076 NCBI chrNW_004955460:9,678,270...9,689,106 JBrowse link
G Nudt15 nudix hydrolase 15 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chrNW_004955431:1,767,971...1,775,555 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ISO (PMID:24217394) UniProtKB PMID:24217394 NCBI chrNW_004955422:24,714,103...24,780,672 JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix hydrolase 16 ISO (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chrNW_004955501:7,083,068...7,085,505 JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 NOT ISO (PMID:24467396) UniProtKB PMID:24467396 NCBI chrNW_004955493:7,357,204...7,360,034 JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5m 5',3'-nucleotidase, mitochondrial ISO (MGI:MGI:2388903|PMID:12234672) MGI PMID:12234672 MGI:MGI:2388903 NCBI chrNW_004955577:582,206...608,614 JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dut deoxyuridine triphosphatase ISO RGD PMID:1315924, PMID:3032103 RGD:2300191, RGD:2301218 NCBI chrNW_004955409:5,574,810...5,584,135 JBrowse link
elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cela1 chymotrypsin like elastase 1 ISO (MGI:MGI:5641427|PMID:24793170) MGI PMID:24793170 MGI:MGI:5641427 NCBI chrNW_004955547:1,810,680...1,823,938 JBrowse link
G Mmp12 matrix metallopeptidase 12 ISO (PMID:29101312) ARUK-UCL PMID:29101312 NCBI chrNW_004955412:6,045,146...6,057,112 JBrowse link
galactolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnliprp2 pancreatic lipase related protein 2 ISO (PMID:15287741), (PMID:17401110), (PMID:18702514), (PMID:20083229) RGD
UniProt
PMID:8765145, PMID:15287741, PMID:17401110, PMID:18702514, PMID:20083229 RGD:2303162 NCBI chrNW_004955431:21,425,345...21,442,979 JBrowse link
galactosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galc galactosylceramidase ISO (MGI:MGI:2183819|PMID:11371512)
(PMID:8399327)
(MGI:MGI:78941|PMID:8769874)
MGI
UniProt
UniProtKB
PMID:8399327, PMID:8769874, PMID:11371512 MGI:MGI:2183819, MGI:MGI:78941 NCBI chrNW_004955438:10,667,807...10,704,386 JBrowse link
G Psap prosaposin ISO (MGI:MGI:2183819|PMID:11371512) MGI PMID:11371512 MGI:MGI:2183819 NCBI chrNW_004955437:19,667,252...19,683,669 JBrowse link
ganglioside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gm2a GM2 ganglioside activator ISO (MGI:MGI:894862|PMID:9223328) MGI PMID:9223328 MGI:MGI:894862 NCBI chrNW_004955408:2,442,406...2,449,426 JBrowse link
G Hexa hexosaminidase subunit alpha ISO (MGI:MGI:69059|PMID:7937929), (MGI:MGI:894862|PMID:9223328)
(PMID:8123671), (PMID:8672428), (PMID:9694901)
(MGI:MGI:1271008|PMID:9645704), (MGI:MGI:78473|PMID:8789434)
MGI
UniProt
PMID:7937929, PMID:8123671, PMID:8672428, PMID:8789434, PMID:9223328, PMID:9645704, PMID:9694901 MGI:MGI:1271008, MGI:MGI:69059, MGI:MGI:78473, MGI:MGI:894862 NCBI chrNW_004955450:4,790,342...4,806,862 JBrowse link
G Hexb hexosaminidase subunit beta ISO (MGI:MGI:76816|PMID:8566348)
(PMID:8123671), (PMID:8672428)
(MGI:MGI:1331265|PMID:10021458), (MGI:MGI:2670850|PMID:12756243), (MGI:MGI:3041658|PMID:12657883), (MGI:MGI:3573807|PMID:15748167), (MGI:MGI:894862|PMID:9223328)
(MGI:MGI:1271008|PMID:9645704), (MGI:MGI:78473|PMID:8789434)
MGI
UniProt
PMID:8123671, PMID:8566348, PMID:8672428, PMID:8789434, PMID:9223328, PMID:9645704, PMID:10021458, PMID:12657883, PMID:12756243, PMID:15748167 MGI:MGI:1271008, MGI:MGI:1331265, MGI:MGI:2670850, MGI:MGI:3041658, MGI:MGI:3573807, MGI:MGI:76816, MGI:MGI:78473, MGI:MGI:894862 NCBI chrNW_004955425:25,942,341...25,961,312 JBrowse link
G Neu2 neuraminidase 2 ISO (PMID:14613940), (PMID:22228546)
(MGI:MGI:1354405|PMID:10713120)
UniProt PMID:10713120, PMID:14613940, PMID:22228546 MGI:MGI:1354405 NCBI chrNW_004955453:3,054,626...3,063,070 JBrowse link
G Neu3 neuraminidase 3 ISO (PMID:10861246), (PMID:11298736), (PMID:15847605), (PMID:17334392)
(MGI:MGI:3765376|PMID:17708748)
UniProt PMID:10861246, PMID:11298736, PMID:15847605, PMID:17334392, PMID:17708748 MGI:MGI:3765376 NCBI chrNW_004955414:16,783,996...16,798,368 JBrowse link
G Neu4 neuraminidase 4 ISO (PMID:15213228), (PMID:15847605)
(MGI:MGI:4361102|PMID:19506080)
UniProt PMID:15213228, PMID:15847605, PMID:19506080 MGI:MGI:4361102 NCBI chrNW_004955542:66,214...70,456 JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 ISO (PMID:22556419) UniProtKB PMID:22556419 NCBI chrNW_004955403:45,598,813...45,601,940 JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 ISO (PMID:9438414) UniProtKB PMID:9438414 NCBI chrNW_004955415:11,770,111...11,783,430 JBrowse link
glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba glucosylceramidase beta ISO (MGI:MGI:5141165|PMID:21700325), (MGI:MGI:5501380|PMID:23707074)
(PMID:19279011), (PMID:21700325), (PMID:24022302)
(PMID:16293621), (PMID:24211208), (PMID:9201993)
(MGI:MGI:6271235|PMID:24211208)
ParkinsonsUK-UCL
BHF-UCL
UniProt
PMID:9201993, PMID:16293621, PMID:19279011, PMID:21700325, PMID:23707074, PMID:24022302, PMID:24211208 MGI:MGI:5141165, MGI:MGI:5501380, MGI:MGI:6271235 NCBI chrNW_004955545:1,682,097...1,689,373 JBrowse link
G Gba2 glucosylceramidase beta 2 ISO (PMID:30308956)
(PMID:17080196)
(MGI:MGI:5484792|PMID:23250757)
(MGI:MGI:3690511|PMID:17080196)
UniProt PMID:17080196, PMID:23250757, PMID:30308956 MGI:MGI:3690511, MGI:MGI:5484792 NCBI chrNW_004955472:553,556...564,411 JBrowse link
glucuronoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd10 abhydrolase domain containing 10, depalmitoylase ISO (PMID:22294686) BHF-UCL PMID:22294686 NCBI chrNW_004955427:12,388,945...12,403,703 JBrowse link
G Gusb glucuronidase beta ISO (MGI:MGI:4414887|PMID:19751987) MGI PMID:19751987 MGI:MGI:4414887 NCBI chrNW_004955456:8,377,161...8,392,298 JBrowse link
glycolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Naga alpha-N-acetylgalactosaminidase ISO (PMID:9741689) UniProtKB PMID:9741689 NCBI chrNW_004955413:27,463,931...27,472,273 JBrowse link
glycoprotein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ISO (MGI:MGI:3654428|PMID:16431915) MGI PMID:16431915 MGI:MGI:3654428 NCBI chrNW_004955406:23,329,400...23,401,282 JBrowse link
G Fbxo2 F-box protein 2 ISO (MGI:MGI:3573989|PMID:15723043), (MGI:MGI:4821082|PMID:12140560) MGI PMID:12140560, PMID:15723043 MGI:MGI:3573989, MGI:MGI:4821082 NCBI chrNW_004955486:2,212,001...2,217,260 JBrowse link
G Fbxo6 F-box protein 6 ISO (MGI:MGI:3573989|PMID:15723043) MGI PMID:15723043 MGI:MGI:3573989 NCBI chrNW_004955486:2,197,296...2,205,947 JBrowse link
G Manba mannosidase beta ISO (MGI:MGI:3615066|PMID:16377659), (MGI:MGI:57603|PMID:3447593) UniProt PMID:3447593, PMID:16377659 MGI:MGI:3615066, MGI:MGI:57603 NCBI chrNW_004955496:5,744,374...5,837,974 JBrowse link
G Neu2 neuraminidase 2 ISO (PMID:14613940) UniProt PMID:14613940 NCBI chrNW_004955453:3,054,626...3,063,070 JBrowse link
G Neu4 neuraminidase 4 ISO (PMID:15213228), (PMID:15847605)
(MGI:MGI:4361102|PMID:19506080), (MGI:MGI:5427293|PMID:22393058)
UniProt PMID:15213228, PMID:15847605, PMID:19506080, PMID:22393058 MGI:MGI:4361102, MGI:MGI:5427293 NCBI chrNW_004955542:66,214...70,456 JBrowse link
G Ngly1 N-glycanase 1 ISO (MGI:MGI:3054122|PMID:15358861)
(PMID:15358861)
UniProtKB PMID:15358861 MGI:MGI:3054122 NCBI chrNW_004955430:17,564,319...17,645,564 JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B ISO (PMID:22607976) UniProtKB PMID:22607976 NCBI chrNW_004955430:22,986,673...23,070,923 JBrowse link
glycosaminoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hyal2 hyaluronidase 2 ISO (PMID:9712871) UniProtKB PMID:9712871 NCBI chrNW_004955532:2,120,781...2,125,083 JBrowse link
G Ids iduronate 2-sulfatase ISO (PMID:28593992) UniProt PMID:28593992 NCBI chrNW_004955498:1,863,002...1,886,720 JBrowse link
G Idua alpha-L-iduronidase ISO (MGI:MGI:5295514|PMID:21873421)
(MGI:MGI:4414887|PMID:19751987)
(MGI:MGI:3697540|PMID:16979922), (MGI:MGI:5448924|PMID:22580166)
(MGI:MGI:4397742|PMID:19834056)
MGI
RGD
PMID:6138357, PMID:16979922, PMID:19751987, PMID:19834056, PMID:21873421, PMID:22580166 MGI:MGI:3697540, MGI:MGI:4397742, MGI:MGI:4414887, MGI:MGI:5295514, MGI:MGI:5448924, RGD:1599427 NCBI chrNW_004955514:474,830...488,007 JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 ISO (MGI:MGI:2135409|PMID:11278811) MGI PMID:11278811 MGI:MGI:2135409 NCBI chrNW_004955414:26,161,768...26,175,621 JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase ISO (PMID:15146460), (PMID:7493035) UniProtKB PMID:7493035, PMID:15146460 NCBI chrNW_004955506:2,701,901...2,713,431 JBrowse link
glycoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fuca1 alpha-L-fucosidase 1 ISO (PMID:19666478) UniProtKB PMID:19666478 NCBI chrNW_004955452:3,744,071...3,759,776 JBrowse link
G Fuca2 alpha-L-fucosidase 2 ISO (PMID:19666478) UniProtKB PMID:19666478 NCBI chrNW_004955436:16,896,629...16,912,406 JBrowse link
G Gba2 glucosylceramidase beta 2 ISO (PMID:17105727) UniProtKB PMID:17105727 NCBI chrNW_004955472:553,556...564,411 JBrowse link
glycosphingolipid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha ISO (PMID:8804427)
(PMID:10838196)
UniProt PMID:8804427, PMID:10838196 NCBI chrNW_004955503:7,526,077...7,535,817 JBrowse link
glycosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gla galactosidase alpha ISO (MGI:MGI:1860035|PMID:10840053), (MGI:MGI:3525994|PMID:15629890)
(MGI:MGI:1859538|PMID:10841515), (MGI:MGI:2155538|PMID:11752062), (MGI:MGI:86774|PMID:9122231)
MGI PMID:9122231, PMID:10840053, PMID:10841515, PMID:11752062, PMID:15629890 MGI:MGI:1859538, MGI:MGI:1860035, MGI:MGI:2155538, MGI:MGI:3525994, MGI:MGI:86774 NCBI chrNW_004955503:7,526,077...7,535,817 JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hprt1 hypoxanthine phosphoribosyltransferase 1 ISO (PMID:19527031) UniProtKB PMID:19527031 NCBI chrNW_004955473:462,940...510,006 JBrowse link
G Prtfdc1 phosphoribosyl transferase domain containing 1 NOT ISO (PMID:21054786) UniProtKB PMID:21054786 NCBI chrNW_004955429:4,234,806...4,325,896 JBrowse link
heparan sulfate proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpc1 glypican 1 ISO (PMID:12732622) UniProtKB PMID:12732622 NCBI chrNW_004955542:947,556...968,295 JBrowse link
G Hpse heparanase ISO (PMID:12213822) UniProtKB PMID:12213822 NCBI chrNW_004955474:6,367,467...6,394,395 JBrowse link
G Sgsh N-sulfoglucosamine sulfohydrolase ISO (PMID:15146460) UniProtKB PMID:15146460 NCBI chrNW_004955506:2,701,901...2,713,431 JBrowse link
heparin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idua alpha-L-iduronidase ISO (MGI:MGI:4414887|PMID:19751987)
(MGI:MGI:4397742|PMID:19834056)
(PMID:21873421)
(MGI:MGI:5295514|PMID:21873421)
MGI PMID:19751987, PMID:19834056, PMID:21873421 MGI:MGI:4397742, MGI:MGI:4414887, MGI:MGI:5295514 NCBI chrNW_004955514:474,830...488,007 JBrowse link
hyaluronan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd44 CD44 molecule (Indian blood group) ISO (PMID:17170110) UniProtKB PMID:17170110 NCBI chrNW_004955422:11,106,061...11,189,951 JBrowse link
G Cemip cell migration inducing hyaluronidase 1 ISO (MGI:MGI:5545862|PMID:24251095)
(PMID:23509262)
UniProtKB PMID:23509262, PMID:24251095 MGI:MGI:5545862 NCBI chrNW_004955416:11,562,047...11,699,925 JBrowse link
G Cemip2 cell migration inducing hyaluronidase 2 ISO (PMID:28246172) UniProtKB PMID:28246172 NCBI chrNW_004955434:1,400,949...1,477,278 JBrowse link
G Fgf2 fibroblast growth factor 2 ISO (PMID:19577615) UniProtKB PMID:19577615 NCBI chrNW_004955428:17,840,554...17,894,779 JBrowse link
G Hyal1 hyaluronidase 1 ISO (PMID:11296287), (PMID:12084718), (PMID:17170110), (PMID:20473947), (PMID:21695196), (PMID:21699545), (PMID:21829529) UniProtKB PMID:11296287, PMID:12084718, PMID:17170110, PMID:20473947, PMID:21695196, PMID:21699545, PMID:21829529 NCBI chrNW_004955532:2,113,016...2,116,093 JBrowse link
G Hyal2 hyaluronidase 2 ISO (PMID:17170110), (PMID:19443707), (PMID:20554532), (PMID:21699545)
PMID:19635555
UniProtKB
UniProt
PMID:17170110, PMID:19443707, PMID:19635555, PMID:20554532, PMID:21699545 RGD:8553259 NCBI chrNW_004955532:2,120,781...2,125,083 JBrowse link
G Hyal3 hyaluronidase 3 ISO (PMID:12084718), (PMID:21699545)
(MGI:MGI:4834982|PMID:20586096)
UniProtKB PMID:12084718, PMID:20586096, PMID:21699545 MGI:MGI:4834982 NCBI chrNW_004955532:2,107,019...2,112,356 JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (PMID:17324121) UniProtKB PMID:17324121 NCBI chrNW_004955555:274,405...288,441 JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix hydrolase 16 ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chrNW_004955501:7,083,068...7,085,505 JBrowse link
G Nudt9 nudix hydrolase 9 ISO (MGI:MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:MGI:2158549 NCBI chrNW_004955474:2,402,400...2,438,145 JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnp purine nucleoside phosphorylase ISO (PMID:16964310) MGI PMID:16964310 NCBI chrNW_004955550:1,290,816...1,299,553 JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itpa inosine triphosphatase ISO (MGI:MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:MGI:5009783 NCBI chrNW_004955415:14,106,786...14,121,975 JBrowse link
keratan sulfate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gns glucosamine (N-acetyl)-6-sulfatase ISO RGD PMID:3161730 RGD:1600571 NCBI chrNW_004955458:11,471,376...11,500,793 JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase ISO (PMID:1883828), (PMID:29343645) UniProtKB PMID:1883828, PMID:29343645 NCBI chrNW_004955460:6,750,851...6,954,185 JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004955486:6,188,102...6,258,230 JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004955421:8,196,631...8,225,561 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004955422:26,243,034...26,271,849 JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ISO (MGI:MGI:3654428|PMID:16431915)
(PMID:25092655)
ParkinsonsUK-UCL PMID:16431915, PMID:25092655 MGI:MGI:3654428 NCBI chrNW_004955406:23,329,400...23,401,282 JBrowse link
G Man1b1 mannosidase alpha class 1B member 1 ISO (PMID:18003979), (PMID:21062743) ParkinsonsUK-UCL PMID:18003979, PMID:21062743 NCBI chrNW_004955513:5,109,651...5,122,568 JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot7 acyl-CoA thioesterase 7 ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004955486:6,188,102...6,258,230 JBrowse link
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chrNW_004955522:945,186...960,094 JBrowse link
negative regulation of elastin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C ISO (PMID:10545518) BHF-UCL PMID:10545518 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mtap methylthioadenosine phosphorylase NOT ISO (PMID:19001417) UniProtKB PMID:19001417 NCBI chrNW_004955472:12,391,399...12,439,221 JBrowse link
G Pnp purine nucleoside phosphorylase ISO (PMID:19001417) UniProtKB PMID:19001417 NCBI chrNW_004955550:1,290,816...1,299,553 JBrowse link
positive regulation of glucosylceramide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkcd protein kinase C delta ISO (PMID:19279011) BHF-UCL PMID:19279011 NCBI chrNW_004955430:3,125,066...3,151,857 JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 ISO (MGI:MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:MGI:6450264 NCBI chrNW_004955522:945,186...960,094 JBrowse link
proteoglycan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 ISO (PMID:17895370) BHF-UCL PMID:17895370 NCBI chrNW_004955426:19,146,288...19,471,880 JBrowse link
purine ribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 ISO (PMID:22995898) UniProtKB PMID:22995898 NCBI chrNW_004955437:11,169,778...11,187,544 JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hint1 histidine triad nucleotide binding protein 1 ISO (PMID:16835243) UniProtKB PMID:16835243 NCBI chrNW_004955408:2,673,950...2,678,528 JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic ISO (PMID:10681516) UniProtKB PMID:10681516 NCBI chrNW_004955553:2,011,549...2,014,209 JBrowse link
pyrimidine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 ISO (PMID:22525402) UniProt PMID:22525402 NCBI chrNW_004955455:7,961,296...7,992,235 JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase ISO (MGI:MGI:2183618|PMID:12023972) RGD
MGI
PMID:11741948, PMID:12023972 MGI:MGI:2183618, RGD:730275 NCBI chrNW_004955422:26,992,295...27,013,100 JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase ISO (PMID:1512248) UniProtKB PMID:1512248 NCBI chrNW_004955435:2,007,185...2,800,907 JBrowse link
ubiquitin-dependent glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (PMID:21062743), (PMID:25092655) ParkinsonsUK-UCL PMID:21062743, PMID:25092655 NCBI chrNW_004955421:8,196,631...8,225,561 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:15537790) ParkinsonsUK-UCL PMID:15537790 NCBI chrNW_004955422:26,243,034...26,271,849 JBrowse link
UDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 ISO (PMID:9556635) UniProtKB PMID:9556635 NCBI chrNW_004955403:46,609,211...46,637,622 JBrowse link
UDP-glucose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galt galactose-1-phosphate uridylyltransferase ISO RGD PMID:8255669 RGD:1598677 NCBI chrNW_004955472:1,487,173...1,490,548 JBrowse link
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:51667|PMID:1421759) MGI PMID:1421759 MGI:MGI:51667 NCBI chrNW_004955530:436,518...452,296 JBrowse link
uridine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upp1 uridine phosphorylase 1 ISO (PMID:7488099)
(MGI:MGI:5476603|PMID:23355744), (MGI:MGI:73237|PMID:7744869)
UniProt PMID:7488099, PMID:7744869, PMID:23355744 MGI:MGI:5476603, MGI:MGI:73237 NCBI chrNW_004955456:5,365,912...5,385,336 JBrowse link
G Upp2 uridine phosphorylase 2 ISO (PMID:12849978), (PMID:21855639)
(MGI:MGI:2683856|PMID:14715930)
UniProt PMID:12849978, PMID:14715930, PMID:21855639 MGI:MGI:2683856 NCBI chrNW_004955449:15,355,592...15,405,997 JBrowse link
very long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 ISO (PMID:23671276) UniProtKB PMID:23671276 NCBI chrNW_004955580:459,715...475,363 JBrowse link
XDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt16 nudix hydrolase 16 ISO (PMID:20385596) UniProtKB PMID:20385596 NCBI chrNW_004955501:7,083,068...7,085,505 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11860
    metabolic process 7594
      organic substance metabolic process 7300
        carbohydrate derivative metabolic process 693
          carbohydrate derivative catabolic process 91
            1,6-anhydro-N-acetyl-beta-muramic acid catabolic process 0
            1-deoxy-D-xylulose 5-phosphate catabolic process 0
            6-sulfoquinovose(1-) catabolic process + 0
            D-ribose 5-phosphate catabolic process 0
            D-tagatose 6-phosphate catabolic process 0
            amino disaccharide catabolic process + 0
            amino sugar catabolic process + 4
            aminoglycan catabolic process + 16
            amylopectin catabolic process + 0
            deoxyribonucleotide catabolic process + 10
            deoxyribose phosphate catabolic process + 10
            glyceraldehyde-3-phosphate catabolic process 0
            glycerol-3-phosphate catabolic process 0
            glycolipid catabolic process + 14
            glycopeptide catabolic process 0
            glycoprotein catabolic process + 18
            glycosyl compound catabolic process + 22
            lipooligosaccharide catabolic process 0
            lipopolysaccharide catabolic process 1
            nucleotide-sugar catabolic process + 2
            ribonucleotide catabolic process + 18
            teichoic acid catabolic process + 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.