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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of autophagosome maturation
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Accession:GO:1901096 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of autophagosome maturation.
Synonyms:exact_synonym: regulation of autophagic vacuole fusion;   regulation of autophagosome fusion
 narrow_synonym: regulation of amphisome-lysosome fusion;   regulation of autolysosome formation;   regulation of fusion of autophagosome with lysosome
 alt_id: GO:1902452


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regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg12 autophagy related 12 involved_in ISO (PMID:22342342) RGD PMID:22342342 NCBI chr18:39,452,247...39,462,424
Ensembl chr18:39,452,191...39,462,418 		JBrowse link
G Atg5 autophagy related 5 involved_in ISO
IEA		 (PMID:22342342)
GO_REF:0000107		 RGD
Ensembl		 PMID:22342342 GO_REF:0000107 NCBI chr20:47,798,222...47,889,216
Ensembl chr20:47,798,290...47,889,209 		JBrowse link
G Clec16a C-type lectin domain containing 16A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578 		JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:5698740|PMID:26450516) RGD PMID:26450516 MGI:5698740 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434 		JBrowse link
G Tbc1d25 TBC1 domain family, member 25 involved_in ISO
IBA		 (PMID:21383079)
PMID:21873635		 RGD PMID:21383079 PMID:21873635 RGD:13792537 NCBI chr  X:14,314,095...14,339,171
Ensembl chr  X:14,314,414...14,338,275 		JBrowse link
G Tecpr1 tectonin beta-propeller repeat containing 1 involved_in ISO (PMID:22342342) RGD PMID:22342342 NCBI chr12:10,391,587...10,420,462
Ensembl chr12:10,391,696...10,419,611 		JBrowse link
negative regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec16a C-type lectin domain containing 16A involved_in ISO (PMID:28223137) RGD PMID:28223137 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578 		JBrowse link
G Phf23 PHD finger protein 23 involved_in ISO
ISS
IBA		 (PMID:25484098)
GO_REF:0000024
PMID:21873635		 RGD
GO_Central		 PMID:25484098 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:54,718,608...54,722,784
Ensembl chr10:54,717,724...54,722,782 		JBrowse link
G Rubcn rubicon autophagy regulator involved_in IBA
ISO		 PMID:21873635
(PMID:21062745)		 RGD PMID:21062745 PMID:21873635 RGD:13792537 NCBI chr11:67,907,534...67,964,347
Ensembl chr11:67,907,516...67,964,314 		JBrowse link
G Tmem39a transmembrane protein 39a involved_in ISO
IBA
ISS		 (PMID:31806350)
PMID:21873635
GO_REF:0000024		 RGD
UniProt		 PMID:31806350 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:62,160,631...62,189,964
Ensembl chr11:62,160,631...62,189,964 		JBrowse link
G Ubqln4 ubiquilin 4 involved_in ISO (PMID:23459205) RGD PMID:23459205 NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059 		JBrowse link
positive regulation of autophagosome maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07025818.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr16:48,598,506...48,599,444 JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in ISO
ISS		 (PMID:23708524)
GO_REF:0000024		 RGD
GO_Central		 PMID:23708524 GO_REF:0000024 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512 		JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 involved_in ISO (PMID:25771791) RGD PMID:25771791 NCBI chr10:81,055,467...81,069,298 JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578 		JBrowse link
G Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 involved_in ISO
IBA		 (PMID:26468287)
PMID:21873635		 RGD PMID:26468287 PMID:21873635 RGD:13792537 NCBI chr 8:123,412,105...123,479,315
Ensembl chr 8:123,412,112...123,479,021 		JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:16888103)
(MGI:3656111|PMID:16888103)		 RGD PMID:16888103 MGI:3656111 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578 		JBrowse link
G Smcr8 SMCR8-C9orf72 complex subunit involved_in ISO (PMID:28195531) RGD PMID:28195531 NCBI chr10:45,457,962...45,465,101
Ensembl chr10:45,457,605...45,468,876 		JBrowse link
G Tom1 target of myb1 membrane trafficking protein involved_in ISO (PMID:23023224) RGD PMID:23023224 NCBI chr19:13,405,482...13,440,384
Ensembl chr19:13,405,501...13,440,384 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19898
    cellular process 18295
      regulation of cellular process 12368
        regulation of cellular component organization 2607
          regulation of protein-containing complex disassembly 137
            regulation of autophagosome maturation 17
              negative regulation of autophagosome maturation 5
              positive regulation of autophagosome maturation 8
Path 2
Term Annotations click to browse term
  biological_process 19898
    biological regulation 13573
      regulation of biological process 13161
        regulation of cellular process 12368
          regulation of cellular metabolic process 5532
            regulation of cellular catabolic process 632
              regulation of autophagy 293
                regulation of macroautophagy 118
                  regulation of autophagosome maturation 17
                    negative regulation of autophagosome maturation 5
                    positive regulation of autophagosome maturation 8
paths to the root