Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:glucosamine-containing compound metabolic process
go back to main search page
Accession:GO:1901071 term browser browse the term
Definition:The chemical reactions and pathways involving glucosamine-containing compounds (glucosamines).
Synonyms:exact_synonym: glucosamine-containing compound metabolism;   glucosamines metabolic process;   glucosamines metabolism



show annotations for term's descendants           Sort by:
 
chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHI3L1 chitinase 3 like 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:203,178,931...203,186,704
Ensembl chr 1:203,178,931...203,186,704
JBrowse link
G CHI3L2 chitinase 3 like 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:111,227,659...111,243,440
Ensembl chr 1:111,200,771...111,243,440
JBrowse link
G CHIA chitinase acidic involved_in IDA
IEA
IBA
ISO
(PMID:19435888)
(PMID:21873635)
UniProt
UniProt
GO_Central
GO_Central
RGD
PMID:11085997 PMID:19435888 PMID:21873635 GO_REF:0000043 GO_REF:0000117 RGD:5000759 NCBI chr 1:111,290,851...111,320,563
Ensembl chr 1:111,290,851...111,320,566
JBrowse link
G CHIT1 chitinase 1 involved_in TAS
IEA
IBA
IDA
(PMID:9748235)
(PMID:21873635)
(PMID:19725875)
UniProt
UniProt
GO_Central
GO_Central
PMID:9748235 PMID:19725875 PMID:21873635 GO_REF:0000043 GO_REF:0000117 NCBI chr 1:203,216,079...203,230,099
Ensembl chr 1:203,212,827...203,273,641
JBrowse link
G CTBS chitobiase involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
GO_Central
Ensembl
RGD
PMID:2751306 PMID:21873635 GO_REF:0000107 RGD:2301430 NCBI chr 1:84,549,611...84,574,440
Ensembl chr 1:84,549,611...84,574,480
JBrowse link
G OVGP1 oviductal glycoprotein 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 1:111,414,319...111,427,735
Ensembl chr 1:111,414,319...111,427,735
JBrowse link
chitin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHIA chitinase acidic involved_in NAS (PMID:10548734) UniProt
UniProt
PMID:10548734 NCBI chr 1:111,290,851...111,320,563
Ensembl chr 1:111,290,851...111,320,566
JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:10898949 RGD:1625426 NCBI chr 2:69,319,780...69,387,227
Ensembl chr 2:69,319,780...69,387,250
JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPDA1 glucosamine-6-phosphate deaminase 1 involved_in IBA
IMP
(PMID:21873635)
(PMID:9438414)
GO_Central
GO_Central
UniProt
UniProt
PMID:9438414 PMID:21873635 NCBI chr 5:142,000,671...142,013,027
Ensembl chr 5:141,991,749...142,013,041
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:44,701,795...44,726,556
Ensembl chr 4:44,682,200...44,726,588
JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chr14:52,775,193...52,791,607
Ensembl chr14:52,775,193...52,791,668
JBrowse link
G OGT O-linked N-acetylglucosamine (GlcNAc) transferase ISO RGD PMID:12054585 PMID:18539296 RGD:9590171 RGD:9590185 NCBI chr  X:71,533,104...71,575,892
Ensembl chr  X:71,533,104...71,575,892
JBrowse link
G PGM3 phosphoglucomutase 3 involved_in NAS (PMID:11004509) UniProt
UniProt
PMID:11004509 NCBI chr 6:83,148,705...83,193,900
Ensembl chr 6:83,161,150...83,193,936
JBrowse link
N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr 9:36,214,441...36,276,978
Ensembl chr 9:36,214,441...36,277,042
JBrowse link
G NANP N-acetylneuraminic acid phosphatase involved_in IEA UniProt
UniProt
GO_REF:0000041 NCBI chr20:25,612,935...25,624,014
Ensembl chr20:25,612,935...25,624,014
JBrowse link
N-acetylglucosamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC093525.1 novel protein involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 Ensembl chr16:2,513,965...2,527,955 JBrowse link
G AMDHD2 amidohydrolase domain containing 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr16:2,520,371...2,531,417
Ensembl chr16:2,520,357...2,531,422
JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 5:142,000,671...142,013,027
Ensembl chr 5:141,991,749...142,013,041
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr 4:44,701,795...44,726,556
Ensembl chr 4:44,682,200...44,726,588
JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC093525.1 novel protein involved_in IEA InterPro GO_REF:0000002 Ensembl chr16:2,513,965...2,527,955 JBrowse link
G AMDHD2 amidohydrolase domain containing 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr16:2,520,371...2,531,417
Ensembl chr16:2,520,357...2,531,422
JBrowse link
G CHST1 carbohydrate sulfotransferase 1 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr11:45,647,689...45,665,622
Ensembl chr11:45,647,689...45,665,622
JBrowse link
G CHST2 carbohydrate sulfotransferase 2 involved_in IBA
IDA
(PMID:21873635)
(PMID:9722682)
GO_Central
UniProt
GO_Central
UniProt
PMID:9722682 PMID:21873635 NCBI chr 3:143,119,771...143,124,014
Ensembl chr 3:143,119,771...143,124,014
JBrowse link
G CHST3 carbohydrate sulfotransferase 3 involved_in IBA (PMID:21873635) GO_Central
GO_Central
PMID:21873635 NCBI chr10:71,964,395...72,013,558
Ensembl chr10:71,964,395...72,013,558
JBrowse link
G CHST4 carbohydrate sulfotransferase 4 involved_in IBA
IDA
(PMID:21873635)
(PMID:10330415)
GO_Central
UniProt
GO_Central
UniProt
PMID:10330415 PMID:21873635 NCBI chr16:71,526,120...71,538,748
Ensembl chr16:71,525,233...71,538,748
JBrowse link
G CHST5 carbohydrate sulfotransferase 5 involved_in IBA
IDA
(PMID:21873635)
(PMID:10491328), (PMID:12218059)
GO_Central
GO_Central
UniProt
UniProt
PMID:10491328 PMID:12218059 PMID:21873635 NCBI chr16:75,528,530...75,536,108
Ensembl chr16:75,528,530...75,536,108
JBrowse link
G CHST6 carbohydrate sulfotransferase 6 involved_in IBA
IC
IDA
(PMID:21873635)
(PMID:11181564)
(PMID:11352640)
GO_Central
UniProt
GO_Central
UniProt
PMID:11181564 PMID:11352640 PMID:21873635 NCBI chr16:75,472,042...75,495,441
Ensembl chr16:75,472,052...75,495,445
JBrowse link
G CHST7 carbohydrate sulfotransferase 7 involved_in IBA
IDA
(PMID:21873635)
(PMID:10913333)
GO_Central
UniProt
GO_Central
UniProt
PMID:10913333 PMID:21873635 NCBI chr  X:46,573,765...46,598,496
Ensembl chr  X:46,573,765...46,598,496
JBrowse link
G EXTL2 exostosin like glycosyltransferase 2 involved_in IDA
IEA
(PMID:10318803) UniProt
UniProt
Ensembl
PMID:10318803 GO_REF:0000107 NCBI chr 1:100,872,372...100,895,179
Ensembl chr 1:100,872,372...100,895,179
JBrowse link
G GNPDA1 glucosamine-6-phosphate deaminase 1 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 5:142,000,671...142,013,027
Ensembl chr 5:141,991,749...142,013,041
JBrowse link
G GNPDA2 glucosamine-6-phosphate deaminase 2 involved_in IEA InterPro
InterPro
GO_REF:0000002 NCBI chr 4:44,701,795...44,726,556
Ensembl chr 4:44,682,200...44,726,588
JBrowse link
G GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 ISO RGD PMID:3792612 RGD:2311686 NCBI chr14:52,775,193...52,791,607
Ensembl chr14:52,775,193...52,791,668
JBrowse link
G HEXB hexosaminidase subunit beta ISO RGD PMID:1397486 RGD:1599434 NCBI chr 5:74,640,023...74,721,288
Ensembl chr 5:74,640,023...74,722,647
JBrowse link
G LARGE1 LARGE xylosyl- and glucuronyltransferase 1 involved_in TAS (PMID:9892679) PINC
PINC
PMID:9892679 NCBI chr22:33,066,663...33,922,824
Ensembl chr22:33,162,226...33,922,841
JBrowse link
G MGAT3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5613435|PMID:24619415)
GO_Central
GO_Central
MGI
PMID:21873635 PMID:24619415 MGI:5613435 NCBI chr22:39,457,012...39,492,194
Ensembl chr22:39,457,012...39,492,194
JBrowse link
G NAGK N-acetylglucosamine kinase involved_in
acts_upstream_of_or_within
TAS
ISO
(PMID:10824116)
(MGI:1859071|PMID:10824116)
PINC
PINC
MGI
PMID:10824116 MGI:1859071 NCBI chr 2:71,068,296...71,079,808
Ensembl chr 2:71,064,344...71,079,808
JBrowse link
G OGA O-GlcNAcase involved_in IDA
ISO
(PMID:11148210) UniProt
UniProt
RGD
PMID:11148210 PMID:19139380 RGD:2305938 NCBI chr10:101,784,450...101,818,444
Ensembl chr10:101,784,443...101,818,465
JBrowse link
G RENBP renin binding protein involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:1858659|PMID:10809771)
GO_Central
Ensembl
GO_Central
MGI
RGD
PMID:10809771 PMID:11726282 PMID:21873635 GO_REF:0000107 MGI:1858659 RGD:5132613 NCBI chr  X:153,935,269...153,944,643
Ensembl chr  X:153,935,269...153,944,687
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19656
    metabolic process 13108
      organic substance metabolic process 12631
        carbohydrate derivative metabolic process 1215
          amino sugar metabolic process 45
            glucosamine-containing compound metabolic process 30
              N-acetylglucosamine metabolic process + 21
              chitin metabolic process + 6
              glucosamine metabolic process + 6
              glucosamine-containing compound biosynthetic process + 3
              glucosamine-containing compound catabolic process + 10
paths to the root