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ONTOLOGY REPORT - ANNOTATIONS


Term:glucosamine-containing compound metabolic process
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Accession:GO:1901071 term browser browse the term
Definition:The chemical reactions and pathways involving glucosamine-containing compounds (glucosamines).
Synonyms:exact_synonym: glucosamine-containing compound metabolism;   glucosamines metabolic process;   glucosamines metabolism



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chitin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chi3l1 chitinase 3 like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:45,641,802...45,649,787
Ensembl chr13:45,641,802...45,649,787
JBrowse link
G Chi3l3 chitinase 3-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:193,808,141...193,825,511
Ensembl chr 2:193,812,431...193,825,513
JBrowse link
G Chia chitinase, acidic involved_in IDA
IEA
IBA
ISO
ISS
GO_REF:0000117
PMID:21873635
(MGI:1931335|PMID:11085997)
(PMID:19435888)
GO_REF:0000024
UniProt
RGD
PMID:11085997 PMID:19435888 PMID:11085997 PMID:21873635 GO_REF:0000024 GO_REF:0000117 MGI:1931335, RGD:5000759, RGD:13792537 NCBI chr 2:193,614,374...193,656,532
Ensembl chr 2:193,614,114...193,656,533
JBrowse link
G Chit1 chitinase 1 involved_in ISO
IBA
(PMID:19725875)
PMID:21873635
RGD PMID:19725875 PMID:21873635 RGD:13792537 NCBI chr13:45,565,841...45,613,593
Ensembl chr13:45,593,845...45,613,592
JBrowse link
G Ctbs chitobiase involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:2751306 PMID:21873635 RGD:2301430, RGD:13792537 NCBI chr 2:235,340,520...235,355,091
Ensembl chr 2:235,340,547...235,355,091
JBrowse link
G RGD1309110 similar to Hypothetical protein MGC58999 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:193,858,038...193,879,133
Ensembl chr 2:193,857,344...193,879,309
JBrowse link
glucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IDA RGD PMID:10898949 RGD:1625426 NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:119,496,714...119,546,471
JBrowse link
glucosamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpda1 glucosamine-6-phosphate deaminase 1 involved_in ISO
IBA
(PMID:9438414)
PMID:21873635
RGD PMID:9438414 PMID:21873635 RGD:13792537 NCBI chr18:30,165,435...30,177,462
Ensembl chr18:30,165,427...30,177,486
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:38,520,663...38,538,713
Ensembl chr14:38,520,705...38,538,713
JBrowse link
glucosamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 IDA RGD PMID:3792612 RGD:2311686 NCBI chr15:18,596,180...18,608,854
Ensembl chr15:18,596,442...18,608,739
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IDA
IMP
RGD PMID:12054585 PMID:18539296 RGD:9590171, RGD:9590185 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
N-acetylglucosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:58,267,189...58,307,396
Ensembl chr 5:58,267,210...58,307,499
JBrowse link
G Nanp N-acetylneuraminic acid phosphatase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:139,826,549...139,841,655
Ensembl chr 3:139,826,549...139,841,648
JBrowse link
N-acetylglucosamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amdhd2 amidohydrolase domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,187,579...13,196,148
Ensembl chr10:13,187,578...13,196,095
JBrowse link
G Gnpda1 glucosamine-6-phosphate deaminase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:30,165,435...30,177,462
Ensembl chr18:30,165,427...30,177,486
JBrowse link
G Gnpda2 glucosamine-6-phosphate deaminase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:38,520,663...38,538,713
Ensembl chr14:38,520,705...38,538,713
JBrowse link
N-acetylglucosamine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst1 carbohydrate sulfotransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:78,552,059...78,574,736
Ensembl chr 3:78,548,525...78,574,883
JBrowse link
G Chst2 carbohydrate sulfotransferase 2 involved_in IBA
ISO
PMID:21873635
(PMID:9722682)
RGD PMID:9722682 PMID:21873635 RGD:13792537 NCBI chr 8:95,960,067...95,965,803
Ensembl chr 8:95,959,826...95,966,955
JBrowse link
G Chst3 carbohydrate sulfotransferase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:28,114,387...28,152,046
Ensembl chr20:28,114,404...28,121,807
JBrowse link
G Chst4 carbohydrate sulfotransferase 4 involved_in IBA
ISO
PMID:21873635
(PMID:10330415)
RGD PMID:10330415 PMID:21873635 RGD:13792537 NCBI chr19:37,993,471...38,002,123
Ensembl chr19:37,991,417...38,003,608
JBrowse link
G Chst5 carbohydrate sulfotransferase 5 involved_in ISO
IBA
(PMID:11352640)
(MGI:1934540|PMID:11278593), (MGI:3687902|PMID:12218059)
PMID:21873635
RGD PMID:11278593 PMID:11352640 PMID:12218059 PMID:21873635 MGI:1934540 MGI:3687902, RGD:13792537 NCBI chr19:39,860,729...39,881,019
Ensembl chr19:39,860,501...39,881,064
JBrowse link
G Chst7 carbohydrate sulfotransferase 7 involved_in ISO
IBA
(PMID:10913333)
PMID:21873635
RGD PMID:10913333 PMID:21873635 RGD:13792537 NCBI chr  X:2,396,260...2,432,828
Ensembl chr  X:2,393,874...2,432,840
JBrowse link
G Extl2 exostosin-like glycosyltransferase 2 involved_in ISO (PMID:10318803)
(MGI:5882911|PMID:12562774)
RGD PMID:10318803 PMID:12562774 MGI:5882911 NCBI chr 2:203,922,217...203,946,940
Ensembl chr 2:203,922,187...203,943,653
JBrowse link
G Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 IDA RGD PMID:3792612 RGD:2311686 NCBI chr15:18,596,180...18,608,854
Ensembl chr15:18,596,442...18,608,739
JBrowse link
G Hexb hexosaminidase subunit beta IDA RGD PMID:1397486 RGD:1599434 NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5613435|PMID:24619415)
RGD PMID:24619415 PMID:21873635 MGI:5613435, RGD:13792537 NCBI chr 7:111,708,353...111,761,825
Ensembl chr 7:111,675,730...111,762,026
JBrowse link
G Nagk N-acetylglucosamine kinase acts_upstream_of_or_within ISO (MGI:1859071|PMID:10824116) RGD PMID:10824116 MGI:1859071 NCBI chr 4:116,281,179...116,293,870
Ensembl chr 4:116,281,328...116,313,137
JBrowse link
G Oga O-GlcNAcase involved_in IMP
ISO
IEA
(PMID:11148210)
GO_REF:0000107
RGD
Ensembl
PMID:11148210 PMID:19139380 GO_REF:0000107, RGD:2305938 NCBI chr 1:244,598,285...244,633,835
Ensembl chr 1:244,598,292...244,634,359
JBrowse link
G Renbp renin binding protein acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
MGI:2386397 (MGI:1858659|PMID:10809771)
PMID:21873635
RGD PMID:10809771 PMID:11726282 PMID:21873635 MGI:1858659, RGD:5132613, RGD:13792537 NCBI chr  X:151,661,463...151,670,538
Ensembl chr  X:151,661,458...151,670,516
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18734
    metabolic process 11458
      organic substance metabolic process 11020
        carbohydrate derivative metabolic process 1060
          amino sugar metabolic process 41
            glucosamine-containing compound metabolic process 26
              N-acetylglucosamine metabolic process + 18
              chitin metabolic process + 6
              glucosamine metabolic process + 5
              glucosamine-containing compound biosynthetic process + 3
              glucosamine-containing compound catabolic process + 9
paths to the root