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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of secondary metabolite biosynthetic process
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Accession:GO:1900376 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.
Synonyms:exact_synonym: regulation of secondary metabolite biosynthesis


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negative regulation of melanin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MFSD12 major facilitator superfamily domain containing 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr19:3,538,270...3,557,592
Ensembl chr19:3,538,261...3,574,290
JBrowse link
G OPN3 opsin 3 involved_in IMP (PMID:31097585) UniProt PMID:31097585 NCBI chr 1:241,593,124...241,640,369
Ensembl chr 1:241,590,102...241,677,376
Ensembl chr 1:241,590,102...241,677,376
JBrowse link
G RAPGEF2 Rap guanine nucleotide exchange factor 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:159,103,079...159,360,173
Ensembl chr 4:159,103,013...159,360,174
JBrowse link
G SLC24A5 solute carrier family 24 member 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3775882|PMID:18166528) Ensembl
MGI
PMID:18166528 GO_REF:0000107 MGI:3775882 NCBI chr15:48,120,990...48,142,672
Ensembl chr15:48,120,990...48,142,672
JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:55,465,715...55,505,261
Ensembl chr 3:55,465,715...55,490,539
JBrowse link
positive regulation of melanin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in IMP (PMID:21291857) UniProt PMID:21291857 NCBI chr 3:57,227,729...57,273,471
Ensembl chr 3:57,227,726...57,278,105
JBrowse link
G ASIP agouti signaling protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:34,186,493...34,269,344
Ensembl chr20:34,194,569...34,269,344
JBrowse link
G ATP7A ATPase copper transporting alpha involved_in IMP (PMID:11092760) UniProt PMID:11092760 NCBI chr  X:77,910,693...78,050,395
Ensembl chr  X:77,910,656...78,050,395
JBrowse link
G CDH3 cadherin 3 involved_in IMP (PMID:23334344) UniProt PMID:23334344 NCBI chr16:68,644,914...68,727,573
Ensembl chr16:68,636,189...68,727,468
JBrowse link
G GIPC1 GIPC PDZ domain containing family member 1 involved_in IMP (PMID:21291857) UniProt PMID:21291857 NCBI chr19:14,477,761...14,496,133
Ensembl chr19:14,477,760...14,496,149
JBrowse link
G OPN3 opsin 3 involved_in IMP (PMID:28842328) UniProt PMID:28842328 NCBI chr 1:241,593,124...241,640,369
Ensembl chr 1:241,590,102...241,677,376
Ensembl chr 1:241,590,102...241,677,376
JBrowse link
G PMEL premelanosome protein involved_in ISO (MGI:5294257|PMID:21949658) CACAO PMID:21949658 MGI:5294257 NCBI chr12:55,954,105...55,966,709
Ensembl chr12:55,954,105...55,973,317
JBrowse link
G TYRP1 tyrosinase related protein 1 involved_in IMP (PMID:21996312) CACAO PMID:21996312 NCBI chr 9:12,693,375...12,710,285
Ensembl chr 9:12,685,439...12,710,285
JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in IC (PMID:24769727) BHF-UCL PMID:24769727 NCBI chr 2:144,384,081...144,520,119
Ensembl chr 2:144,364,364...144,521,057
JBrowse link
regulation of melanin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNS cystinosin, lysosomal cystine transporter involved_in IMP (PMID:22649030) UniProt PMID:22649030 NCBI chr17:3,636,459...3,663,103
Ensembl chr17:3,636,459...3,663,103
JBrowse link
G MFSD12 major facilitator superfamily domain containing 12 involved_in IMP (PMID:33208952) UniProt PMID:33208952 NCBI chr19:3,538,270...3,557,592
Ensembl chr19:3,538,261...3,574,290
JBrowse link
G SLC7A11 solute carrier family 7 member 11 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588610|PMID:16037214) Ensembl
MGI
PMID:16037214 GO_REF:0000107 MGI:3588610 NCBI chr 4:138,164,097...138,242,349
Ensembl chr 4:138,164,097...138,242,349
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18526
    metabolic process 11851
      biosynthetic process 6236
        regulation of biosynthetic process 4451
          regulation of secondary metabolite biosynthetic process 15
            negative regulation of secondary metabolite biosynthetic process + 5
            positive regulation of secondary metabolite biosynthetic process + 9
            regulation of (+)-kotanin biosynthetic process + 0
            regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process + 0
            regulation of aflatoxin biosynthetic process + 0
            regulation of arugosin biosynthetic process + 0
            regulation of asperthecin biosynthetic process + 0
            regulation of brevianamide F biosynthetic process + 0
            regulation of cordyol C biosynthetic process + 0
            regulation of dehydroaustinol biosynthetic process + 0
            regulation of demethylkotanin biosynthetic process + 0
            regulation of diorcinol biosynthetic process + 0
            regulation of emericellamide biosynthetic process + 0
            regulation of emericellin biosynthetic process + 0
            regulation of emodin biosynthetic process + 0
            regulation of endocrocin biosynthetic process + 0
            regulation of ergot alkaloid biosynthetic process + 0
            regulation of fumitremorgin B biosynthetic process + 0
            regulation of fumonisin biosynthetic process + 0
            regulation of gerfelin biosynthetic process + 0
            regulation of gliotoxin biosynthetic process + 0
            regulation of glucosinolate biosynthetic process 0
            regulation of helvolic acid biosynthetic process + 0
            regulation of lignin biosynthetic process + 0
            regulation of melanin biosynthetic process + 15
            regulation of monodictyphenone biosynthetic process + 0
            regulation of o-orsellinic acid biosynthetic process + 0
            regulation of orcinol biosynthetic process + 0
            regulation of penicillin biosynthetic process + 0
            regulation of phytoalexin biosynthetic process + 0
            regulation of polyketide biosynthetic process + 0
            regulation of proanthocyanidin biosynthetic process 0
            regulation of siderophore biosynthetic process + 0
            regulation of sinapate ester biosynthetic process + 0
            regulation of sterigmatocystin biosynthetic process + 0
            regulation of tensidol A biosynthetic process + 0
            regulation of tensidol B biosynthetic process + 0
            regulation of terrequinone A biosynthetic process + 0
            regulation of violaceol I biosynthetic process + 0
            regulation of violaceol II biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 18526
    biological regulation 13076
      regulation of biological process 12358
        regulation of metabolic process 7171
          regulation of secondary metabolic process 15
            regulation of secondary metabolite biosynthetic process 15
              negative regulation of secondary metabolite biosynthetic process + 5
              positive regulation of secondary metabolite biosynthetic process + 9
              regulation of (+)-kotanin biosynthetic process + 0
              regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process + 0
              regulation of aflatoxin biosynthetic process + 0
              regulation of arugosin biosynthetic process + 0
              regulation of asperthecin biosynthetic process + 0
              regulation of brevianamide F biosynthetic process + 0
              regulation of cordyol C biosynthetic process + 0
              regulation of dehydroaustinol biosynthetic process + 0
              regulation of demethylkotanin biosynthetic process + 0
              regulation of diorcinol biosynthetic process + 0
              regulation of emericellamide biosynthetic process + 0
              regulation of emericellin biosynthetic process + 0
              regulation of emodin biosynthetic process + 0
              regulation of endocrocin biosynthetic process + 0
              regulation of ergot alkaloid biosynthetic process + 0
              regulation of fumitremorgin B biosynthetic process + 0
              regulation of fumonisin biosynthetic process + 0
              regulation of gerfelin biosynthetic process + 0
              regulation of gliotoxin biosynthetic process + 0
              regulation of glucosinolate biosynthetic process 0
              regulation of helvolic acid biosynthetic process + 0
              regulation of lignin biosynthetic process + 0
              regulation of melanin biosynthetic process + 15
              regulation of monodictyphenone biosynthetic process + 0
              regulation of o-orsellinic acid biosynthetic process + 0
              regulation of orcinol biosynthetic process + 0
              regulation of penicillin biosynthetic process + 0
              regulation of phytoalexin biosynthetic process + 0
              regulation of polyketide biosynthetic process + 0
              regulation of proanthocyanidin biosynthetic process 0
              regulation of siderophore biosynthetic process + 0
              regulation of sinapate ester biosynthetic process + 0
              regulation of sterigmatocystin biosynthetic process + 0
              regulation of tensidol A biosynthetic process + 0
              regulation of tensidol B biosynthetic process + 0
              regulation of terrequinone A biosynthetic process + 0
              regulation of violaceol I biosynthetic process + 0
              regulation of violaceol II biosynthetic process + 0
paths to the root