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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of ruffle assembly
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Accession:GO:1900027 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of ruffle assembly.
Synonyms:exact_synonym: regulation of membrane ruffle formation;   regulation of membrane ruffling


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regulation of ruffle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936589:2,504,235...2,536,778 JBrowse link
G Coro1c coronin 1C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936769:555,719...637,420 JBrowse link
G Icam1 intercellular adhesion molecule 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486234|PMID:23372835) MGI
Ensembl
PMID:23372835 GO_REF:0000107 MGI:5486234 NCBI chrNW_004936659:616,570...627,172 JBrowse link
G LOC101962840 WD repeat containing planar cell polarity effector acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5544506|PMID:24302887) MGI
Ensembl
PMID:24302887 GO_REF:0000107 MGI:5544506 NCBI chrNW_004936491:8,238,644...8,749,172 JBrowse link
G P2rx4 purinergic receptor P2X 4 NOT|involved_in ISO PMID:17299767 ARUK-UCL PMID:17299767 RGD:13673751 NCBI chrNW_004936558:3,062,279...3,077,493 JBrowse link
G Rcc2 regulator of chromosome condensation 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936474:4,265,572...4,307,283 JBrowse link
G Rdx radixin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936612:3,992,542...4,060,598 JBrowse link
G Rhog ras homolog family member G acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5486234|PMID:23372835) MGI
Ensembl
PMID:23372835 GO_REF:0000107 MGI:5486234 NCBI chrNW_004936498:1,077,354...1,088,003 JBrowse link
G Sh3yl1 SH3 and SYLF domain containing 1 acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5008671|PMID:21624956) MGI
Ensembl
PMID:21624956 GO_REF:0000107 MGI:5008671 NCBI chrNW_004936532:101,571...127,331 JBrowse link
negative regulation of ruffle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap24 Rho GTPase activating protein 24 acts_upstream_of_or_within ISO (MGI:5297730|PMID:21911940) MGI PMID:21911940 MGI:5297730 NCBI chrNW_004936896:57,250...213,918 JBrowse link
G Evl Enah/Vasp-like involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936604:3,720,038...3,819,928 JBrowse link
G Kank1 KN motif and ankyrin repeat domains 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936503:4,125,302...4,255,880 JBrowse link
G LOC101967251 profilin-2 involved_in ISO (MGI:5545940|PMID:23153535) UniProt PMID:23153535 MGI:5545940 NCBI chrNW_004936727:1,992,508...1,993,271 JBrowse link
G Pfn2 profilin 2 involved_in ISO (PMID:23153535) UniProt PMID:23153535
G Stap1 signal transducing adaptor family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936582:877,241...908,697 JBrowse link
G Tacstd2 tumor associated calcium signal transducer 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936522:3,206,826...3,208,675 JBrowse link
positive regulation of ruffle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil2 capping protein regulator and myosin 1 linker 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936475:18,036,233...18,049,144 JBrowse link
G Cobl cordon-bleu WH2 repeat protein involved_in ISO (MGI:3765263|PMID:17956734) BHF-UCL PMID:17956734 MGI:3765263 NCBI chrNW_004936686:621,502...872,824 JBrowse link
G Cyfip1 cytoplasmic FMR1 interacting protein 1 ISO RGD PMID:16260607 RGD:11557987 NCBI chrNW_004936471:38,264,455...38,331,995 JBrowse link
G Def8 differentially expressed in FDCP 8 homolog involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936641:158,115...174,524 JBrowse link
G Eps8l1 EPS8 like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936886:380,533...388,931 JBrowse link
G Eps8l2 EPS8 like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:506,144...523,280 JBrowse link
G Fam98a family with sequence similarity 98 member A involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936493:77,729...92,427 JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936888:375,372...378,125 JBrowse link
G Ndel1 nudE neurodevelopment protein 1 like 1 involved_in ISO (MGI:5806241|PMID:27777970) UniProt PMID:27777970 MGI:5806241 NCBI chrNW_004936595:1,656,956...1,692,775 JBrowse link
G Nlgn1 neuroligin 1 involved_in ISO PMID:12930820 BHF-UCL PMID:12930820 RGD:8554754 NCBI chrNW_004936703:951,935...1,415,991 JBrowse link
G P2ry12 purinergic receptor P2Y12 involved_in ISO PMID:17299767 ARUK-UCL PMID:17299767 RGD:13673751 NCBI chrNW_004936758:1,581,828...1,624,332 JBrowse link
G Pfn1 profilin 1 involved_in ISO (PMID:23153535) UniProt PMID:23153535 NCBI chrNW_004936677:2,762,971...2,766,038 JBrowse link
G Plekhm1 pleckstrin homology and RUN domain containing M1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004936541:1,685,902...1,732,361 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 14954
    regulation of biological process 10116
      regulation of cellular process 9688
        regulation of cellular component biogenesis 993
          regulation of cell projection assembly 223
            regulation of plasma membrane bounded cell projection assembly 220
              regulation of ruffle assembly 29
                negative regulation of ruffle assembly 7
                positive regulation of ruffle assembly 13
Path 2
Term Annotations click to browse term
  biological_process 14954
    cellular process 14088
      cellular component organization or biogenesis 5448
        cellular component organization 5319
          cell projection organization 1580
            plasma membrane bounded cell projection organization 1560
              ruffle organization 56
                ruffle assembly 44
                  regulation of ruffle assembly 29
                    negative regulation of ruffle assembly 7
                    positive regulation of ruffle assembly 13
paths to the root