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ONTOLOGY REPORT - ANNOTATIONS

Term:cell junction disassembly
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Accession:GO:0150146 term browser browse the term
Definition:The disaggregation of a cell junction into its constituent components.


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adherens junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fer FER tyrosine kinase IEP RGD PMID:12700184 RGD:2291909 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451 		JBrowse link
cell-cell junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asb17 ankyrin repeat and SOCS box-containing 17 acts_upstream_of_positive_effect ISO MGI:7314167 (PMID:35070814) RGD PMID:35070814 NCBI chr 2:242,775,887...242,786,950
Ensembl chr 2:242,775,994...242,786,903 		JBrowse link
complement-mediated synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qa complement C1q A chain involved_in ISO (PMID:18083105) RGD PMID:18083105 NCBI chr 5:149,133,635...149,136,482
Ensembl chr 5:149,133,636...149,136,534 		JBrowse link
G C3 complement C3 involved_in IEA
ISO 		GO_REF:0000107
(PMID:18083105) 		Ensembl
RGD		 PMID:18083105 GO_REF:0000107 NCBI chr 9:2,087,437...2,114,366
Ensembl chr 9:2,087,437...2,114,429 		JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (PMID:22632727) RGD PMID:22632727 NCBI chr 1:182,659,047...182,709,501
Ensembl chr 1:182,659,000...182,709,503 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:30548312) RGD PMID:30548312 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
desmosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:9182671) RGD PMID:9182671 NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:29752066) RGD PMID:29752066 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
focal adhesion disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:27378169) 		Ensembl
RGD		 PMID:27378169 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Ston1 stonin 1 acts_upstream_of_or_within ISO
IEA 		MGI:5788726 (PMID:26437238)
GO_REF:0000107 		RGD
Ensembl		 PMID:26437238 GO_REF:0000107 NCBI chr 6:5,843,186...5,892,557
Ensembl chr 6:5,843,185...5,892,449 		JBrowse link
positive regulation of focal adhesion disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ARF GTPase 6 involved_in ISO
IEA 		(PMID:25490267)
GO_REF:0000107 		RGD
Ensembl		 PMID:25490267 GO_REF:0000107 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114 		JBrowse link
G Dusp3 dual specificity phosphatase 3 involved_in ISO (PMID:28759036) RGD PMID:28759036 NCBI chr10:86,920,014...86,933,739
Ensembl chr10:86,920,014...86,933,962 		JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 involved_in ISO (PMID:25490267) RGD PMID:25490267 NCBI chr 4:123,168,719...123,488,300
Ensembl chr 4:123,168,719...123,488,172 		JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 involved_in ISO (PMID:25490267) RGD PMID:25490267 NCBI chr 9:42,200,708...42,326,708
Ensembl chr 9:42,200,278...42,326,698 		JBrowse link
G Mapre2 microtubule-associated protein, RP/EB family, member 2 involved_in IEA
ISO 		GO_REF:0000107
(PMID:25490267) 		Ensembl
RGD		 PMID:25490267 GO_REF:0000107 NCBI chr18:15,303,502...15,444,306
Ensembl chr18:15,029,041...15,168,044 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO (PMID:11038173) RGD PMID:11038173 NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
positive regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO
IEA 		(PMID:33097708)
GO_REF:0000107 		RGD
Ensembl		 PMID:33097708 GO_REF:0000107 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
positive regulation of tight junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 IMP RGD PMID:23633925 RGD:12791991 NCBI chr 1:96,598,568...96,679,563
Ensembl chr 1:96,598,647...96,679,510 		JBrowse link
G Il1b interleukin 1 beta acts_upstream_of ISO (PMID:18390750) RGD PMID:18390750 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Mylk3 myosin light chain kinase 3 acts_upstream_of_or_within ISO
IEA 		(PMID:18390750)
GO_REF:0000107 		RGD
Ensembl		 PMID:18390750 GO_REF:0000107 NCBI chr19:21,685,085...21,743,587
Ensembl chr19:21,691,929...21,742,954 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO (PMID:18718461) RGD PMID:18718461 NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in IEA
ISO 		GO_REF:0000107
UniProtKB:P10600 (PMID:18718461) 		Ensembl
RGD		 PMID:18718461 GO_REF:0000107 NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
regulation of excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnk13 potassium two pore domain channel subfamily K member 13 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:34642249) 		UniProt
Ensembl
RGD		 PMID:34642249 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:119,240,825...119,345,292
Ensembl chr 6:119,242,188...119,345,240 		JBrowse link
regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in ISO
IEA 		(PMID:25611509)
GO_REF:0000107 		RGD
Ensembl		 PMID:25611509 GO_REF:0000107 NCBI chr 9:27,421,168...28,148,979
Ensembl chr 9:27,421,168...28,148,855 		JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:10,003,963...10,041,122
Ensembl chr19:10,003,975...10,041,108 		JBrowse link
G C1ql1 complement C1q like 1 involved_in ISO
IEA 		(PMID:25611509)
GO_REF:0000107 		RGD
Ensembl		 PMID:25611509 GO_REF:0000107 NCBI chr10:87,902,125...87,909,556
Ensembl chr10:87,902,137...87,909,310 		JBrowse link
G Cd47 Cd47 molecule involved_in ISO (PMID:30308165) RGD PMID:30308165 NCBI chr11:50,906,052...50,970,000
Ensembl chr11:50,906,177...50,969,425 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in IDA
IMP
EXP 		PMID:17143272 SynGO PMID:17143272 PMID:17143272 PMID:17143272 RGD:8554385, RGD:8554385, RGD:8554385 NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Epha4 Eph receptor A4 involved_in IMP
IEP
EXP
IDA 		PMID:17143272 SynGO PMID:17143272 PMID:17143272 PMID:17143272 PMID:17143272 RGD:8554385, RGD:8554385, RGD:8554385, RGD:8554385 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:24831527) RGD PMID:24831527 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in ISO
IEA 		(PMID:17143272)
GO_REF:0000107 		RGD
Ensembl		 PMID:17143272 GO_REF:0000107 NCBI chr 9:88,146,956...88,244,454
Ensembl chr 9:88,146,956...88,244,914 		JBrowse link
G Plxnc1 plexin C1 involved_in ISO
IEA 		(PMID:24831527)
GO_REF:0000107 		RGD
Ensembl		 PMID:24831527 GO_REF:0000107 NCBI chr 7:29,390,038...29,543,985
Ensembl chr 7:29,390,048...29,543,779 		JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in ISO
IEA 		(PMID:22678360)
GO_REF:0000107 		RGD
Ensembl		 PMID:22678360 GO_REF:0000107 NCBI chr10:63,369,456...63,393,016
Ensembl chr10:63,369,456...63,392,822 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 involved_in ISO
IEA 		(PMID:34407949)
GO_REF:0000107 		RGD
Ensembl		 PMID:34407949 GO_REF:0000107 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qa complement C1q A chain involved_in ISO UniProtKB:P14106|UniProtKB:Q02105 (PMID:27033548) RGD PMID:27033548 NCBI chr 5:149,133,635...149,136,482
Ensembl chr 5:149,133,636...149,136,534 		JBrowse link
G C1qb complement C1q B chain involved_in IEA
ISO 		GO_REF:0000107
UniProtKB:P98086|UniProtKB:Q02105 (PMID:27033548) 		Ensembl
RGD		 PMID:27033548 GO_REF:0000107 NCBI chr 5:149,118,843...149,124,394
Ensembl chr 5:149,118,846...149,124,407 		JBrowse link
G C1qc complement C1q C chain involved_in ISO
IEA 		UniProtKB:P14106|UniProtKB:P98086 (PMID:27033548)
GO_REF:0000107 		RGD
Ensembl		 PMID:27033548 GO_REF:0000107 NCBI chr 5:149,127,412...149,130,757
Ensembl chr 5:149,127,415...149,131,017 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:21778362) 		UniProt
RGD		 PMID:21778362 GO_REF:0000024 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014 		JBrowse link
G Epha4 Eph receptor A4 involved_in ISO
IEA 		(PMID:12496762)
GO_REF:0000107 		RGD
Ensembl		 PMID:12496762 GO_REF:0000107 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cellular component organization or biogenesis 7114
        cellular component organization 6827
          cell junction organization 989
            cell junction disassembly 35
              cell-cell junction disassembly + 8
              cell-substrate junction disassembly + 8
              synapse pruning + 19
paths to the root