Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:cell junction disassembly
go back to main search page
Accession:GO:0150146 term browser browse the term
Definition:The disaggregation of a cell junction into its constituent components.


show annotations for term's descendants           Sort by:
adherens junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fer FER tyrosine kinase IEP RGD PMID:12700184 RGD:2291909 NCBI chr 9:110,967,317...111,274,315
Ensembl chr 9:103,520,493...103,821,451 		JBrowse link
cell-cell junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asb17 ankyrin repeat and SOCS box-containing 17 acts_upstream_of_positive_effect ISO MGI:7314167 (PMID:35070814) RGD PMID:35070814 NCBI chr 2:245,435,718...245,446,785
Ensembl chr 2:242,775,994...242,786,903 		JBrowse link
complement-mediated synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qa complement C1q A chain involved_in ISO (PMID:18083105) RGD PMID:18083105 NCBI chr 5:154,417,086...154,419,933
Ensembl chr 5:149,133,636...149,136,534 		JBrowse link
G C3 complement C3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18083105)		 Ensembl
RGD		 PMID:18083105 GO_REF:0000107 NCBI chr 9:2,174,412...2,201,339
Ensembl chr 9:2,087,437...2,114,429 		JBrowse link
G Itgam integrin subunit alpha M involved_in ISO (PMID:22632727) RGD PMID:22632727 NCBI chr 1:192,089,496...192,139,947
Ensembl chr 1:182,659,000...182,709,503 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:30548312) RGD PMID:30548312 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
desmosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:9182671) RGD PMID:9182671 NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:29752066) RGD PMID:29752066 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
focal adhesion disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:27378169)		 Ensembl
RGD		 PMID:27378169 GO_REF:0000107 NCBI chr 7:126,518,587...126,614,581
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Ston1 stonin 1 acts_upstream_of_or_within ISO
IEA		 MGI:5788726 (PMID:26437238)
GO_REF:0000107		 RGD
Ensembl		 PMID:26437238 GO_REF:0000107 NCBI chr 6:11,596,726...11,646,098
Ensembl chr 6:5,843,185...5,892,449 		JBrowse link
positive regulation of focal adhesion disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arf6 ARF GTPase 6 involved_in ISO
IEA		 (PMID:25490267)
GO_REF:0000107		 RGD
Ensembl		 PMID:25490267 GO_REF:0000107 NCBI chr 6:93,589,777...93,590,925
Ensembl chr 6:87,840,142...87,874,114 		JBrowse link
G Dusp3 dual specificity phosphatase 3 involved_in ISO (PMID:28759036) RGD PMID:28759036 NCBI chr10:87,420,213...87,434,202
Ensembl chr10:86,920,014...86,933,962 		JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 involved_in ISO (PMID:25490267) RGD PMID:25490267 NCBI chr 4:124,725,917...125,045,351
Ensembl chr 4:123,168,719...123,488,172 		JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 involved_in ISO (PMID:25490267) RGD PMID:25490267 NCBI chr 9:49,696,573...49,822,353
Ensembl chr 9:42,200,278...42,326,698 		JBrowse link
G Mapre2 microtubule-associated protein, RP/EB family, member 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:25490267)		 Ensembl
RGD		 PMID:25490267 GO_REF:0000107 NCBI chr18:15,303,502...15,444,306
Ensembl chr18:15,029,041...15,168,044 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO (PMID:11038173) RGD PMID:11038173 NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:32,882,032...32,963,631 		JBrowse link
positive regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO
IEA		 (PMID:33097708)
GO_REF:0000107		 RGD
Ensembl		 PMID:33097708 GO_REF:0000107 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:12,647,259...12,654,170 		JBrowse link
positive regulation of tight junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 IMP RGD PMID:23633925 RGD:12791991 NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:96,598,647...96,679,510 		JBrowse link
G Il1b interleukin 1 beta acts_upstream_of ISO (PMID:18390750) RGD PMID:18390750 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Mylk3 myosin light chain kinase 3 acts_upstream_of_or_within ISO
IEA		 (PMID:18390750)
GO_REF:0000107		 RGD
Ensembl		 PMID:18390750 GO_REF:0000107 NCBI chr19:37,858,298...37,916,805
Ensembl chr19:21,691,929...21,742,954 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO (PMID:18718461) RGD PMID:18718461 NCBI chr 6:111,435,170...111,457,646
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P10600 (PMID:18718461)		 Ensembl
RGD		 PMID:18718461 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
regulation of excitatory synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnk13 potassium two pore domain channel subfamily K member 13 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:34642249)		 UniProt
Ensembl
RGD		 PMID:34642249 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:124,970,363...125,074,919
Ensembl chr 6:119,242,188...119,345,240 		JBrowse link
regulation of synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adgrb3 adhesion G protein-coupled receptor B3 involved_in ISO
IEA		 (PMID:25611509)
GO_REF:0000107		 RGD
Ensembl		 PMID:25611509 GO_REF:0000107 NCBI chr 9:34,917,474...35,645,350
Ensembl chr 9:27,421,168...28,148,855 		JBrowse link
G Adgrg1 adhesion G protein-coupled receptor G1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr19:10,009,983...10,047,138
Ensembl chr19:10,003,975...10,041,108 		JBrowse link
G C1ql1 complement C1q like 1 involved_in ISO
IEA		 (PMID:25611509)
GO_REF:0000107		 RGD
Ensembl		 PMID:25611509 GO_REF:0000107 NCBI chr10:88,402,219...88,409,649
Ensembl chr10:87,902,137...87,909,310 		JBrowse link
G Cd47 Cd47 molecule involved_in ISO (PMID:30308165) RGD PMID:30308165 NCBI chr11:64,374,816...64,438,763
Ensembl chr11:50,906,177...50,969,425 		JBrowse link
G Cdk5 cyclin-dependent kinase 5 involved_in IDA
IMP
EXP		 PMID:17143272 SynGO PMID:17143272 PMID:17143272 PMID:17143272 RGD:8554385, RGD:8554385, RGD:8554385 NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112 		JBrowse link
G Epha4 Eph receptor A4 involved_in IMP
IEP
EXP
IDA		 PMID:17143272 SynGO PMID:17143272 PMID:17143272 PMID:17143272 PMID:17143272 RGD:8554385, RGD:8554385, RGD:8554385, RGD:8554385 NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139 		JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO (PMID:24831527) RGD PMID:24831527 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Ngef neuronal guanine nucleotide exchange factor involved_in ISO
IEA		 (PMID:17143272)
GO_REF:0000107		 RGD
Ensembl		 PMID:17143272 GO_REF:0000107 NCBI chr 9:95,594,823...95,692,381
Ensembl chr 9:88,146,956...88,244,914 		JBrowse link
G Plxnc1 plexin C1 involved_in ISO
IEA		 (PMID:24831527)
GO_REF:0000107		 RGD
Ensembl		 PMID:24831527 GO_REF:0000107 NCBI chr 7:31,276,978...31,430,823
Ensembl chr 7:29,390,048...29,543,779 		JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in ISO
IEA		 (PMID:22678360)
GO_REF:0000107		 RGD
Ensembl		 PMID:22678360 GO_REF:0000107 NCBI chr10:63,867,503...63,890,872
Ensembl chr10:63,369,456...63,392,822 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 involved_in ISO
IEA		 (PMID:34407949)
GO_REF:0000107		 RGD
Ensembl		 PMID:34407949 GO_REF:0000107 NCBI chr13:86,995,124...87,021,770
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
synapse pruning term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qa complement C1q A chain involved_in ISO UniProtKB:P14106|UniProtKB:Q02105 (PMID:27033548) RGD PMID:27033548 NCBI chr 5:154,417,086...154,419,933
Ensembl chr 5:149,133,636...149,136,534 		JBrowse link
G C1qb complement C1q B chain involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:P98086|UniProtKB:Q02105 (PMID:27033548)		 Ensembl
RGD		 PMID:27033548 GO_REF:0000107 NCBI chr 5:154,402,276...154,407,827
Ensembl chr 5:149,118,846...149,124,407 		JBrowse link
G C1qc complement C1q C chain involved_in ISO
IEA		 UniProtKB:P14106|UniProtKB:P98086 (PMID:27033548)
GO_REF:0000107		 RGD
Ensembl		 PMID:27033548 GO_REF:0000107 NCBI chr 5:154,410,845...154,414,208
Ensembl chr 5:149,127,415...149,131,017 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21778362)		 UniProt
RGD		 PMID:21778362 GO_REF:0000024 NCBI chr 8:128,661,294...128,679,048
Ensembl chr 8:119,782,595...119,800,014 		JBrowse link
G Epha4 Eph receptor A4 involved_in ISO
IEA		 (PMID:12496762)
GO_REF:0000107		 RGD
Ensembl		 PMID:12496762 GO_REF:0000107 NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20567
    cellular process 19557
      cellular component organization or biogenesis 7115
        cellular component organization 6828
          cell junction organization 989
            cell junction disassembly 35
              cell-cell junction disassembly + 8
              cell-substrate junction disassembly + 8
              synapse pruning + 19
paths to the root