ONTOLOGY REPORT - ANNOTATIONS |
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Term: | regulation of cell-substrate junction organization |
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Accession: | GO:0150116
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browse the term
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Definition: | Any process that modulates the frequency, rate or extent of cell-substrate junction organization. |
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Lamtor2 |
late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 |
acts_upstream_of_or_within |
ISO |
MGI:3701832 (MGI:5609900|PMID:24841562) |
RGD |
PMID:24841562 |
MGI:5609900 |
NCBI chr 2:187,911,530...187,914,930
Ensembl chr 2:187,911,533...187,915,596
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Acvrl1 |
activin A receptor like type 1 |
involved_in |
ISO |
(PMID:12453878) |
RGD |
PMID:12453878 |
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NCBI chr 7:142,769,942...142,787,336
Ensembl chr 7:142,776,252...142,787,335
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Apod |
apolipoprotein D |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:21705670) |
UniProt Ensembl RGD |
PMID:21705670 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:72,705,204...72,726,263
Ensembl chr11:72,705,129...72,726,301
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Arhgap6 |
Rho GTPase activating protein 6 |
involved_in |
ISO |
(PMID:10699171) |
RGD |
PMID:10699171 |
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NCBI chr X:26,314,561...26,845,242
Ensembl chr X:26,315,878...26,376,467
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Bcas3 |
BCAS3, microtubule associated cell migration factor |
involved_in |
ISO |
(MGI:5582152|PMID:22300583) |
RGD |
PMID:22300583 |
MGI:5582152 |
NCBI chr10:72,756,548...73,271,851 NCBI chr10:72,951,303...73,015,309
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Clasp2 |
cytoplasmic linker associated protein 2 |
involved_in |
ISO IEA |
(PMID:24859005) GO_REF:0000107 |
RGD Ensembl |
PMID:24859005 |
GO_REF:0000107 |
NCBI chr 8:122,003,719...122,185,495
Ensembl chr 8:122,003,916...122,185,495
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Coro1c |
coronin 1C |
involved_in |
ISO |
(PMID:19913511) |
RGD |
PMID:19913511 |
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NCBI chr12:48,481,741...48,554,054
Ensembl chr12:48,481,750...48,554,052
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Dlc1 |
DLC1 Rho GTPase activating protein |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:19158340) |
Ensembl RGD |
PMID:19158340 |
GO_REF:0000107 |
NCBI chr16:58,776,489...59,247,752
Ensembl chr16:59,077,574...59,247,754
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Dmtn |
dematin actin binding protein |
involved_in |
ISO |
(MGI:3803395|PMID:18505823) |
RGD |
PMID:18505823 |
MGI:3803395 |
NCBI chr15:52,292,762...52,320,385
Ensembl chr15:52,292,765...52,320,385
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Dusp22 |
dual specificity phosphatase 22 |
involved_in |
ISO |
(PMID:20018849) |
RGD |
PMID:20018849 |
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NCBI chr17:34,986,589...35,037,297
Ensembl chr17:34,986,591...35,037,076
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Fam107a |
family with sequence similarity 107, member A |
involved_in |
ISO IEA ISS |
(PMID:20543869) GO_REF:0000107 GO_REF:0000024 |
RGD Ensembl UniProt |
PMID:20543869 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr15:18,399,145...18,415,959
Ensembl chr15:18,399,515...18,415,965
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Itgb1bp1 |
integrin subunit beta 1 binding protein 1 |
involved_in |
ISO |
(PMID:12473654) (MGI:5486544|PMID:18227284) |
RGD |
PMID:12473654 PMID:18227284 |
MGI:5486544 |
NCBI chr 6:43,348,927...43,363,633
Ensembl chr 6:43,348,958...43,363,335
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Lrp1 |
LDL receptor related protein 1 |
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IMP |
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RGD |
PMID:20197276 |
RGD:13800550 |
NCBI chr 7:70,846,313...70,927,028
Ensembl chr 7:70,846,344...70,926,903
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Mmp14 |
matrix metallopeptidase 14 |
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IDA |
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RGD |
PMID:15044209 |
RGD:1582604 |
NCBI chr15:33,074,441...33,083,666
Ensembl chr15:33,074,441...33,083,655
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Phldb2 |
pleckstrin homology-like domain, family B, member 2 |
involved_in |
ISO |
(PMID:24859005) |
RGD |
PMID:24859005 |
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NCBI chr11:60,042,879...60,051,229
Ensembl chr11:57,265,732...57,481,589
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Pten |
phosphatase and tensin homolog |
involved_in |
ISO |
(PMID:9616126) |
RGD |
PMID:9616126 |
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NCBI chr 1:251,421,814...251,487,634
Ensembl chr 1:251,421,596...251,487,832
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Rcc2 |
regulator of chromosome condensation 2 |
involved_in |
ISO |
(MGI:5551375|PMID:19738201) |
RGD |
PMID:19738201 |
MGI:5551375 |
NCBI chr 5:159,220,531...159,236,313
Ensembl chr 5:159,220,979...159,234,320
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Src |
SRC proto-oncogene, non-receptor tyrosine kinase |
involved_in |
IMP |
PMID:21440892 |
BHF-UCL |
PMID:21440892 |
RGD:7248703 |
NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
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Abl1 |
ABL proto-oncogene 1, non-receptor tyrosine kinase |
involved_in |
ISO |
(PMID:24863063) |
RGD |
PMID:24863063 |
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NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388 Ensembl chr 3:10,041,826...10,144,388
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Cfl1 |
cofilin 1 |
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IMP |
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RGD |
PMID:24093776 |
RGD:11570550 |
NCBI chr 1:220,869,805...220,873,337
Ensembl chr 1:220,869,805...220,873,337
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Col16a1 |
collagen type XVI alpha 1 chain |
involved_in |
ISO |
(PMID:24466237) |
RGD |
PMID:24466237 |
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NCBI chr 5:148,257,030...148,311,645
Ensembl chr 5:148,257,642...148,311,645
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Enpp2 |
ectonucleotide pyrophosphatase/phosphodiesterase 2 |
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IDA |
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RGD |
PMID:22139091 |
RGD:9685417 |
NCBI chr 7:94,479,931...94,563,086
Ensembl chr 7:94,480,396...94,563,001
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Epb41l5 |
erythrocyte membrane protein band 4.1 like 5 |
acts_upstream_of_or_within |
ISO |
MGI:3822451 (MGI:3821807|PMID:18794329) |
RGD |
PMID:18794329 |
MGI:3821807 |
NCBI chr13:35,622,472...35,673,449
Ensembl chr13:35,580,098...35,668,968
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Fermt2 |
FERM domain containing kindlin 2 |
involved_in |
ISO |
(PMID:29496737) |
RGD |
PMID:29496737 |
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NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
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Fmn1 |
formin 1 |
acts_upstream_of_or_within |
ISO |
MGI:3800994 (MGI:3798334|PMID:18560567) |
RGD |
PMID:18560567 |
MGI:3798334 |
NCBI chr 3:104,783,093...105,170,761
Ensembl chr 3:104,816,987...105,086,436
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Hrg |
histidine-rich glycoprotein |
involved_in |
IEA ISS ISO |
GO_REF:0000107 GO_REF:0000024 (PMID:14744774), (PMID:16436387) |
Ensembl UniProt RGD |
PMID:14744774 PMID:16436387 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:81,621,274...81,639,938
Ensembl chr11:81,621,283...81,639,952
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Iqgap1 |
IQ motif containing GTPase activating protein 1 |
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IMP |
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RGD |
PMID:23657573 |
RGD:11049552 |
NCBI chr 1:142,525,041...142,615,673
Ensembl chr 1:142,525,046...142,615,673
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Itgb1bp1 |
integrin subunit beta 1 binding protein 1 |
involved_in |
ISO |
(MGI:5486551|PMID:17654484) |
RGD |
PMID:17654484 |
MGI:5486551 |
NCBI chr 6:43,348,927...43,363,633
Ensembl chr 6:43,348,958...43,363,335
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Kdr |
kinase insert domain receptor |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:12820653) |
Ensembl RGD |
PMID:12820653 |
GO_REF:0000107 |
NCBI chr14:34,727,677...34,787,127
Ensembl chr14:34,727,623...34,787,183
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Lims1 |
LIM zinc finger domain containing 1 |
involved_in |
ISO |
(PMID:20926685) |
RGD |
PMID:20926685 |
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NCBI chr20:27,895,981...28,004,767
Ensembl chr20:27,954,433...28,002,082
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LOC681544 |
similar to histidine-rich glycoprotein |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
Ensembl chr11:81,621,283...81,639,952
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Map4k4 |
mitogen-activated protein kinase kinase kinase kinase 4 |
involved_in |
ISO |
(MGI:6189265|PMID:25490267) |
RGD |
PMID:25490267 |
MGI:6189265 |
NCBI chr 9:46,657,444...46,782,545
Ensembl chr 9:46,657,575...46,782,545
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Myh9 |
myosin, heavy chain 9 |
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IMP |
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RGD |
PMID:21598299 |
RGD:12798522 |
NCBI chr 7:118,740,005...118,792,507
Ensembl chr 7:118,741,110...118,792,625
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Myoc |
myocilin |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:18855004) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:18855004 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr13:80,517,531...80,527,928
Ensembl chr13:80,517,536...80,527,928
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Nrp1 |
neuropilin 1 |
involved_in |
ISO |
(PMID:24863063) |
RGD |
PMID:24863063 |
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NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
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Poldip2 |
DNA polymerase delta interacting protein 2 |
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IMP |
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RGD |
PMID:30354218 |
RGD:124713558 |
NCBI chr10:65,781,994...65,790,833
Ensembl chr10:65,780,494...65,790,272
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Ppm1f |
protein phosphatase, Mg2+/Mn2+ dependent, 1F |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:20016286) |
UniProt RGD |
PMID:20016286 |
GO_REF:0000024 |
NCBI chr11:88,313,709...88,343,726
Ensembl chr11:88,313,709...88,343,627
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Ptpn11 |
protein tyrosine phosphatase, non-receptor type 11 |
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IMP |
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RGD |
PMID:16905534 |
RGD:39456088 |
NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
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Ptprj |
protein tyrosine phosphatase, receptor type, J |
involved_in |
ISO |
(PMID:21091576) |
RGD |
PMID:21091576 |
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NCBI chr 3:79,233,519...79,390,956
Ensembl chr 3:79,233,525...79,390,956
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Rac1 |
Rac family small GTPase 1 |
involved_in |
ISO |
(PMID:23129259) |
RGD |
PMID:23129259 |
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NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
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Rock1 |
Rho-associated coiled-coil containing protein kinase 1 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5486551|PMID:17654484) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:17654484 |
GO_REF:0000024 GO_REF:0000107 MGI:5486551 |
NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
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S100a10 |
S100 calcium binding protein A10 |
involved_in |
ISO |
(PMID:23129259) |
RGD |
PMID:23129259 |
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NCBI chr 2:193,892,589...193,901,236
Ensembl chr 2:193,892,589...193,901,236
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Sdc4 |
syndecan 4 |
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IMP |
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RGD |
PMID:10504291 |
RGD:2312327 |
NCBI chr 3:160,872,503...160,891,190
Ensembl chr 3:160,872,503...160,891,190
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Smad3 |
SMAD family member 3 |
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IDA |
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RGD |
PMID:15987742 |
RGD:2300418 |
NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
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Tek |
TEK receptor tyrosine kinase |
involved_in |
ISO |
(PMID:18425120) |
RGD |
PMID:18425120 |
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NCBI chr 5:113,725,717...113,852,799
Ensembl chr 5:113,725,717...113,852,799
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Thy1 |
Thy-1 cell surface antigen |
involved_in |
ISO ISS |
(PMID:18346467) (MGI:3796911|PMID:18346467) |
RGD |
PMID:18346467, PMID:18346467 |
MGI:3796911, RGD:12793016 |
NCBI chr 8:48,382,121...48,387,271
Ensembl chr 8:48,382,121...48,386,935
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Tsc1 |
TSC complex subunit 1 |
involved_in |
ISO |
(PMID:10806479) |
RGD |
PMID:10806479 |
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NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
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Vegfa |
vascular endothelial growth factor A |
involved_in |
ISO ISS |
(PMID:16489009) GO_REF:0000024 |
RGD UniProt |
PMID:16489009 |
GO_REF:0000024 |
NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681
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Wnt4 |
Wnt family member 4 |
involved_in |
IEA ISO |
GO_REF:0000107 UniProtKB:P01112 (MGI:5487484|PMID:23027131) |
Ensembl RGD |
PMID:23027131 |
GO_REF:0000107 MGI:5487484 |
NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
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Arf6 |
ADP-ribosylation factor 6 |
involved_in |
ISO |
(MGI:6189265|PMID:25490267) |
RGD |
PMID:25490267 |
MGI:6189265 |
NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
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Dusp3 |
dual specificity phosphatase 3 |
involved_in |
ISO |
(PMID:28759036) |
RGD |
PMID:28759036 |
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NCBI chr10:89,904,578...89,918,296
Ensembl chr10:89,904,560...89,918,427
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Iqsec1 |
IQ motif and Sec7 domain ArfGEF 1 |
involved_in |
ISO |
(MGI:6189265|PMID:25490267) |
RGD |
PMID:25490267 |
MGI:6189265 |
NCBI chr 4:123,400,717...123,454,656
Ensembl chr 4:123,307,624...123,453,478
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Map4k4 |
mitogen-activated protein kinase kinase kinase kinase 4 |
involved_in |
ISO |
(MGI:6189265|PMID:25490267) |
RGD |
PMID:25490267 |
MGI:6189265 |
NCBI chr 9:46,657,444...46,782,545
Ensembl chr 9:46,657,575...46,782,545
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Mapre2 |
microtubule-associated protein, RP/EB family, member 2 |
involved_in |
ISO |
(MGI:6189265|PMID:25490267) |
RGD |
PMID:25490267 |
MGI:6189265 |
NCBI chr18:14,814,149...15,780,290
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Pik3r1 |
phosphoinositide-3-kinase regulatory subunit 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:6450670|PMID:11038173) |
Ensembl RGD |
PMID:11038173 |
GO_REF:0000107 MGI:6450670 |
NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
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Actg1 |
actin, gamma 1 |
involved_in |
ISO |
(PMID:25705373) |
RGD |
PMID:25705373 |
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NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954 Ensembl chr10:75,643,054...75,644,954
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Camsap3 |
calmodulin regulated spectrin-associated protein family, member 3 |
involved_in |
ISO |
(PMID:27693509) |
RGD |
PMID:27693509 |
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NCBI chr12:2,133,935...2,157,403
Ensembl chr12:2,134,022...2,157,403
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Clasp1 |
cytoplasmic linker associated protein 1 |
involved_in |
ISO |
(PMID:24859005) |
RGD |
PMID:24859005 |
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NCBI chr13:34,365,038...34,584,651
Ensembl chr13:34,365,147...34,584,651
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Coro1c |
coronin 1C |
involved_in |
ISO |
UniProtKB:Q05397 (PMID:19913511) |
RGD |
PMID:19913511 |
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NCBI chr12:48,481,741...48,554,054
Ensembl chr12:48,481,750...48,554,052
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Dapk3 |
death-associated protein kinase 3 |
involved_in |
ISO |
(PMID:23454120) |
RGD |
PMID:23454120 |
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NCBI chr 7:11,392,436...11,400,855
Ensembl chr 7:11,392,437...11,400,805
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Dusp3 |
dual specificity phosphatase 3 |
involved_in |
ISO |
(PMID:28759036) (MGI:6101044|PMID:28759036) |
RGD |
PMID:28759036 |
MGI:6101044 |
NCBI chr10:89,904,578...89,918,296
Ensembl chr10:89,904,560...89,918,427
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Efna5 |
ephrin A5 |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (PMID:11870224) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:11870224 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 9:110,054,002...110,329,878
Ensembl chr 9:110,057,155...110,225,486
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Epha3 |
Eph receptor A3 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (PMID:11870224) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:11870224 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr11:421,253...783,037
Ensembl chr11:421,135...782,954
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Gpm6b |
glycoprotein m6b |
involved_in |
IEA ISS ISO |
GO_REF:0000107 GO_REF:0000024 (PMID:21638316) |
Ensembl UniProt RGD |
PMID:21638316 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:29,604,607...29,751,174
Ensembl chr X:29,607,075...29,648,403
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Grem1 |
gremlin 1, DAN family BMP antagonist |
involved_in |
ISO |
(MGI:3834346|PMID:17077323) |
RGD |
PMID:17077323 |
MGI:3834346 |
NCBI chr 3:105,203,309...105,214,989
Ensembl chr 3:105,203,309...105,214,989
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Ldb1 |
LIM domain binding 1 |
involved_in |
ISO |
(MGI:5751678|PMID:19675209) |
RGD |
PMID:19675209 |
MGI:5751678 |
NCBI chr 1:265,772,729...265,798,442
Ensembl chr 1:265,785,409...265,798,167
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Limch1 |
LIM and calponin homology domains 1 |
involved_in |
ISO IBA |
(PMID:28228547) PMID:21873635 |
RGD |
PMID:28228547, PMID:21873635 |
RGD:13792537 |
NCBI chr14:42,760,363...43,072,976
Ensembl chr14:42,762,587...43,072,843
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LOC680875 |
similar to dystonin isoform 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:117,180,653...117,187,739
Ensembl chr 7:117,180,812...117,187,367
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Macf1 |
microtubule-actin crosslinking factor 1 |
involved_in |
ISS ISO IBA |
GO_REF:0000024 (MGI:3828223|PMID:18854161) (PMID:27693509) PMID:21873635 |
UniProt RGD |
PMID:18854161 PMID:27693509, PMID:21873635 |
GO_REF:0000024 MGI:3828223, RGD:13792537 |
NCBI chr 5:141,039,455...141,363,524
Ensembl chr 5:141,039,468...141,363,524
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Peak1 |
pseudopodium-enriched atypical kinase 1 |
involved_in |
ISO |
(PMID:23105102) |
RGD |
PMID:23105102 |
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NCBI chr 8:60,861,742...61,080,128
Ensembl chr 8:60,867,819...61,079,526
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Ptk2 |
protein tyrosine kinase 2 |
involved_in |
ISO IEA |
UniProtKB:Q9ULV4 (PMID:19913511) GO_REF:0000107 |
RGD Ensembl |
PMID:19913511 |
GO_REF:0000107 |
NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
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G |
Ptpra |
protein tyrosine phosphatase, receptor type, A |
involved_in |
IEA ISO ISS |
GO_REF:0000107 (MGI:5442237|PMID:22801373) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:22801373 |
GO_REF:0000024 GO_REF:0000107 MGI:5442237 |
NCBI chr 3:122,976,066...123,084,585
Ensembl chr 3:122,976,104...123,084,863
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G |
Rhod |
ras homolog family member D |
involved_in |
ISO |
(MGI:5512821|PMID:23454120) |
RGD |
PMID:23454120 |
MGI:5512821 |
NCBI chr 1:219,668,352...219,682,287
Ensembl chr 1:219,668,352...219,682,287
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G |
Slk |
STE20-like kinase |
involved_in |
ISS IEA ISO |
GO_REF:0000024 GO_REF:0000107 (PMID:23128389) |
UniProt Ensembl RGD |
PMID:23128389 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:267,359,761...267,415,735
Ensembl chr 1:267,359,830...267,412,810
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G |
Tsc1 |
TSC complex subunit 1 |
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IMP |
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RGD |
PMID:15611338 |
RGD:1601406 |
NCBI chr 3:7,219,955...7,269,063
Ensembl chr 3:7,237,192...7,265,145
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G |
Vcl |
vinculin |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:26923917) |
Ensembl RGD |
PMID:26923917 |
GO_REF:0000107 |
NCBI chr15:3,455,211...3,544,738
Ensembl chr15:3,455,211...3,544,702
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G |
Wdpcp |
WD repeat containing planar cell polarity effector |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:5558098 (MGI:5544506|PMID:24302887) |
Ensembl RGD |
PMID:24302887 |
GO_REF:0000107 MGI:5544506 |
NCBI chr14:106,393,959...106,759,511
Ensembl chr14:106,393,959...106,759,505
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Term paths to the root
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