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ONTOLOGY REPORT - ANNOTATIONS


Term:visual system development
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Accession:GO:0150063 term browser browse the term
Definition:The process whose specific outcome is the progression of the visual system over time, from its formation to the mature structure, including the eye, parts of the central nervous system (CNS) involved in processing of visual inputs, and connecting nerve pathways.
Synonyms:related_synonym: optic pathway development;   visual pathway development


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visual system development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P2ry12 purinergic receptor P2Y12 ISO (MGI:5806217|PMID:26948129) ARUK-UCL PMID:26948129 MGI:5806217 NCBI chrNW_004955448:2,442,368...2,488,567
Ensembl chrNW_004955448:2,442,368...2,488,567
JBrowse link
amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxn4 forkhead box N4 ISO (MGI:3054139|PMID:15363391) UniProt PMID:15363391 MGI:3054139 NCBI chrNW_004955455:9,182,405...9,210,365
Ensembl chrNW_004955455:9,183,475...9,210,506
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791
JBrowse link
G Neurod1 neuronal differentiation 1 ISO (MGI:2158684|PMID:11861467) UniProt PMID:11861467 MGI:2158684 NCBI chrNW_004955403:15,595,888...15,600,040
Ensembl chrNW_004955403:15,595,888...15,600,040
JBrowse link
G Neurod4 neuronal differentiation 4 ISO (MGI:2158684|PMID:11861467) UniProt PMID:11861467 MGI:2158684 NCBI chrNW_004955458:2,138,849...2,146,636
Ensembl chrNW_004955458:2,138,849...2,146,636
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO (MGI:3691257|PMID:17075007) UniProt PMID:17075007 MGI:3691257 NCBI chrNW_004955429:5,807,804...5,809,522
Ensembl chrNW_004955429:5,808,124...5,809,522
JBrowse link
G Rorb RAR related orphan receptor B ISO (MGI:5546314|PMID:23652001) UniProt PMID:23652001 MGI:5546314 NCBI chrNW_004955512:4,362,287...4,541,432
Ensembl chrNW_004955512:4,362,287...4,541,445
JBrowse link
camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 ISO (MGI:3525751|PMID:15572692) MGI PMID:15572692 MGI:3525751 NCBI chrNW_004955457:11,451,851...11,562,692
Ensembl chrNW_004955457:11,451,851...11,562,696
JBrowse link
G Ahr aryl hydrocarbon receptor ISO (MGI:1889403|PMID:10973493) DFLAT PMID:10973493 MGI:1889403 NCBI chrNW_004955410:20,428,531...20,459,482 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 ISO (MGI:3612223|PMID:16368932)
(MGI:3055706|PMID:15366004)
MGI PMID:15366004 PMID:16368932 MGI:3055706 MGI:3612223 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 ISO (MGI:1926242|PMID:11044403) MGI PMID:11044403 MGI:1926242 NCBI chrNW_004955574:915,604...984,744
Ensembl chrNW_004955574:915,325...984,744
JBrowse link
G B9d1 B9 domain containing 1 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004955467:405,487...415,887
Ensembl chrNW_004955467:405,490...416,116
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (MGI:3043486|PMID:14681194)
(MGI:1095762|PMID:9268572)
MGI PMID:9268572 PMID:14681194 MGI:1095762 MGI:3043486 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (MGI:3574003|PMID:15673568) MGI PMID:15673568 MGI:3574003 NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO (PMID:15454078) BHF-UCL PMID:15454078 NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506
JBrowse link
G Cc2d2a coiled-coil and C2 domain containing 2A ISO (MGI:5696765|PMID:24947469) MGI PMID:24947469 MGI:5696765 NCBI chrNW_004955480:8,404,239...8,514,792
Ensembl chrNW_004955480:8,400,284...8,514,736
JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C ISO (MGI:3839493|PMID:19276117) MGI PMID:19276117 MGI:3839493 NCBI chrNW_004955422:14,576,971...14,578,868 JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 ISO (MGI:3611161|PMID:16207732) MGI PMID:16207732 MGI:3611161 NCBI chrNW_004955444:17,859,999...18,067,623
Ensembl chrNW_004955444:17,858,771...18,067,248
JBrowse link
G Cryaa crystallin alpha A ISO (MGI:2682441|PMID:12546709) MGI PMID:12546709 MGI:2682441 NCBI chrNW_004955407:38,880,088...38,892,946 JBrowse link
G Cryab crystallin alpha B ISO (MGI:2682441|PMID:12546709) MGI PMID:12546709 MGI:2682441 NCBI chrNW_004955412:13,626,018...13,629,495
Ensembl chrNW_004955412:13,625,363...13,640,426
JBrowse link
G Cryba1 crystallin beta A1 ISO (MGI:1350675|PMID:10585769) MGI PMID:10585769 MGI:1350675 NCBI chrNW_004955481:3,952,976...3,986,548
Ensembl chrNW_004955481:3,952,988...3,959,764
JBrowse link
G Cryba4 crystallin beta A4 involved_in ISO (PMID:16960806) UniProt PMID:16960806 NCBI chrNW_004955455:1,176,668...1,187,731
Ensembl chrNW_004955455:1,176,668...1,187,731
JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955424:27,181,717...27,240,067
Ensembl chrNW_004955424:27,181,099...27,240,446
JBrowse link
G Fat1 FAT atypical cadherin 1 ISO (MGI:5766588|PMID:26114487) MGI PMID:26114487 MGI:5766588 NCBI chrNW_004955403:22,502,625...22,618,513
Ensembl chrNW_004955403:22,502,625...22,619,211
JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955409:5,281,603...5,502,547
Ensembl chrNW_004955409:5,281,603...5,504,761
JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955415:1,307,553...1,535,435
Ensembl chrNW_004955415:1,309,077...1,537,052
JBrowse link
G Fkbp8 FKBP prolyl isomerase 8 ISO (MGI:3039989|PMID:15105374) MGI PMID:15105374 MGI:3039989 NCBI chrNW_004955524:3,037,825...3,044,296
Ensembl chrNW_004955524:3,036,953...3,044,296
JBrowse link
G Foxp2 forkhead box P2 ISO (MGI:3723373|PMID:17619227) MGI PMID:17619227 MGI:3723373 NCBI chrNW_004955432:20,205,369...20,589,608
Ensembl chrNW_004955432:20,334,237...20,589,352
JBrowse link
G Gas1 growth arrest specific 1 ISO (MGI:3713422|PMID:17525797) MGI PMID:17525797 MGI:3713422 NCBI chrNW_004955432:727,784...729,096 JBrowse link
G Gja8 gap junction protein alpha 8 ISO (MGI:3047041|PMID:15253273)
(MGI:2156142|PMID:11782410)
MGI PMID:11782410 PMID:15253273 MGI:2156142 MGI:3047041 NCBI chrNW_004955568:514,905...516,551
Ensembl chrNW_004955568:515,113...516,435
JBrowse link
G Gli3 GLI family zinc finger 3 ISO (MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:3807419 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 ISO (MGI:4947900|PMID:21296886) MGI PMID:21296886 MGI:4947900 NCBI chrNW_004955449:16,695,855...16,804,184
Ensembl chrNW_004955449:16,695,435...16,802,908
JBrowse link
G Grhl2 grainyhead like transcription factor 2 ISO (MGI:4943100|PMID:21377456) MGI PMID:21377456 MGI:4943100 NCBI chrNW_004955417:26,401,337...26,533,297
Ensembl chrNW_004955417:26,401,363...26,533,297
JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISO (MGI:3703278|PMID:17331197) UniProt PMID:17331197 MGI:3703278 NCBI chrNW_004955486:8,700,212...8,701,581
Ensembl chrNW_004955486:8,700,162...8,701,748
JBrowse link
G Hesx1 HESX homeobox 1 ISO (MGI:3821905|PMID:19093031) MGI PMID:19093031 MGI:3821905 NCBI chrNW_004955430:6,955,575...6,956,991
Ensembl chrNW_004955430:6,955,575...6,956,991
JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:16488668 RGD:10002779 NCBI chrNW_004955432:3,246,090...3,257,774
Ensembl chrNW_004955432:3,246,092...3,257,774
JBrowse link
G Hsf4 heat shock transcription factor 4 ISO (MGI:3056833|PMID:15483628)
(MGI:3721138|PMID:16595169)
MGI PMID:15483628 PMID:16595169 MGI:3056833 MGI:3721138 NCBI chrNW_004955484:9,447,641...9,452,784
Ensembl chrNW_004955484:9,447,641...9,452,784
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO (MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:3807419 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO (MGI:1336582|PMID:10196361) MGI PMID:10196361 MGI:1336582 NCBI chrNW_004955415:20,490,414...20,526,068
Ensembl chrNW_004955415:20,490,414...20,527,917
JBrowse link
G Lim2 lens intrinsic membrane protein 2 ISO (MGI:1197732|PMID:9238094) MGI PMID:9238094 MGI:1197732 NCBI chrNW_004955558:1,019,709...1,024,375
Ensembl chrNW_004955558:1,019,244...1,024,375
JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta ISO (MGI:1353150|PMID:10660670)
(MGI:4461349|PMID:20568247)
MGI PMID:10660670 PMID:20568247 MGI:1353150 MGI:4461349 NCBI chrNW_004955419:1,782,566...1,857,375
Ensembl chrNW_004955419:1,782,566...1,857,375
JBrowse link
G LOC102010850 cytochrome P450 1A1 ISO RGD PMID:15967433 RGD:2306661 NCBI chrNW_004955450:3,183,958...3,189,488
Ensembl chrNW_004955450:3,183,750...3,189,488
JBrowse link
G Mab21l1 mab-21 like 1 ISO (MGI:2652201|PMID:12642482) MGI PMID:12642482 MGI:2652201 NCBI chrNW_004955431:10,570,656...10,573,618
Ensembl chrNW_004955431:10,571,712...10,572,791
JBrowse link
G Mab21l2 mab-21 like 2 ISO (MGI:3510098|PMID:15385160) MGI PMID:15385160 MGI:3510098 NCBI chrNW_004955471:5,296,292...5,298,432
Ensembl chrNW_004955471:5,297,259...5,298,338
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO (MGI:2674169|PMID:12941696) MGI PMID:12941696 MGI:2674169 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136
JBrowse link
G Med1 mediator complex subunit 1 ISO (MGI:2682174|PMID:14500757) MGI PMID:14500757 MGI:2682174 NCBI chrNW_004955451:14,204,326...14,237,809
Ensembl chrNW_004955451:14,202,744...14,237,797
JBrowse link
G Mitf melanocyte inducing transcription factor ISO (MGI:3512656|PMID:15576400) MGI PMID:15576400 MGI:3512656 NCBI chrNW_004955421:17,948,117...18,157,379
Ensembl chrNW_004955421:17,947,277...18,154,090
JBrowse link
G Mterf4 mitochondrial transcription termination factor 4 ISO (MGI:5287350|PMID:21531335) MGI PMID:21531335 MGI:5287350 NCBI chrNW_004955542:579,183...584,617
Ensembl chrNW_004955542:579,356...584,508
JBrowse link
G Mtnr1a melatonin receptor 1A ISO RGD PMID:12890503 RGD:9588674 NCBI chrNW_004955403:22,636,212...22,658,566
Ensembl chrNW_004955403:22,636,212...22,658,566
JBrowse link
G Mtnr1b melatonin receptor 1B ISO RGD PMID:12890503 RGD:9588674 NCBI chrNW_004955414:1,394,709...1,406,990
Ensembl chrNW_004955414:1,394,923...1,407,217
JBrowse link
G Myf5 myogenic factor 5 ISO (MGI:3849775|PMID:19531352) MGI PMID:19531352 MGI:3849775 NCBI chrNW_004955405:19,345,943...19,348,453
Ensembl chrNW_004955405:19,345,943...19,348,453
JBrowse link
G Neurod1 neuronal differentiation 1 ISO (MGI:2158684|PMID:11861467) MGI PMID:11861467 MGI:2158684 NCBI chrNW_004955403:15,595,888...15,600,040
Ensembl chrNW_004955403:15,595,888...15,600,040
JBrowse link
G Neurod4 neuronal differentiation 4 ISO (MGI:2158684|PMID:11861467) MGI PMID:11861467 MGI:2158684 NCBI chrNW_004955458:2,138,849...2,146,636
Ensembl chrNW_004955458:2,138,849...2,146,636
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 ISO (MGI:3054148|PMID:15371513)
(MGI:3582135|PMID:16000615)
MGI PMID:15371513 PMID:16000615 MGI:3054148 MGI:3582135 NCBI chrNW_004955411:33,303,765...33,325,221
Ensembl chrNW_004955411:33,303,655...33,325,376
JBrowse link
G Pax2 paired box 2 ISO (MGI:2662558|PMID:12756174) MGI PMID:12756174 MGI:2662558 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
G Pax6 paired box 6 ISO (MGI:2181466|PMID:12072567)
(MGI:1927276|PMID:11069887)
(MGI:2384485|PMID:12183364)
(MGI:1928799|PMID:11062307)
(MGI:2654287|PMID:12648492), (MGI:3584303|PMID:16080917)
(MGI:2662558|PMID:12756174)
MGI PMID:11062307 PMID:11069887 PMID:12072567 PMID:12183364 PMID:12648492 PMID:12756174 PMID:16080917 MGI:1927276 MGI:1928799 MGI:2181466 MGI:2384485 MGI:2654287 MGI:2662558 MGI:3584303 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Pcnt pericentrin ISO (MGI:5696764|PMID:25220058) MGI PMID:25220058 MGI:5696764 NCBI chrNW_004955407:42,735,078...42,835,851
Ensembl chrNW_004955407:42,735,188...42,835,465
JBrowse link
G Pitx2 paired like homeodomain 2 involved_in ISO (PMID:9618168) BHF-UCL PMID:9618168 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310
JBrowse link
G Pknox1 PBX/knotted 1 homeobox 1 ISO (MGI:3653971|PMID:16847320) MGI PMID:16847320 MGI:3653971 NCBI chrNW_004955407:38,949,060...38,982,984
Ensembl chrNW_004955407:38,948,200...38,982,984
JBrowse link
G Prss56 serine protease 56 involved_in ISO (MGI:5441705|PMID:21532570)
(PMID:21397065)
MGI
UniProt
PMID:21397065 PMID:21532570 MGI:5441705 NCBI chrNW_004955453:3,440,871...3,446,090
Ensembl chrNW_004955453:3,441,109...3,446,090
JBrowse link
G Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 involved_in ISO (PMID:20512159) BHF-UCL PMID:20512159 NCBI chrNW_004955440:2,551,015...2,645,938
Ensembl chrNW_004955440:2,550,982...2,646,331
JBrowse link
G Rarg retinoic acid receptor gamma ISO (MGI:1096258|PMID:9376317) MGI PMID:9376317 MGI:1096258 NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
JBrowse link
G Rax retina and anterior neural fold homeobox ISO (MGI:48767|PMID:17247120), (MGI:54439|PMID:640224), (MGI:61292|PMID:13970081)
(MGI:1929394|PMID:11105055), (MGI:3575215|PMID:15789424)
MGI PMID:640224 PMID:11105055 PMID:13970081 PMID:15789424 PMID:17247120 MGI:1929394 MGI:3575215 MGI:48767 MGI:54439 MGI:61292 NCBI chrNW_004955402:43,408,933...43,414,697
Ensembl chrNW_004955402:43,410,404...43,414,306
JBrowse link
G Rcn1 reticulocalbin 1 ISO (MGI:4355498|PMID:19474196) MGI PMID:19474196 MGI:4355498 NCBI chrNW_004955476:10,280,669...10,289,668
Ensembl chrNW_004955476:10,280,669...10,289,799
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:9512345 RGD:633787 NCBI chrNW_004955423:23,184,326...23,208,206
Ensembl chrNW_004955423:23,183,937...23,208,282
JBrowse link
G Rpgrip1l RPGRIP1 like ISO (MGI:3715393|PMID:17553904), (MGI:3716248|PMID:17558409) MGI PMID:17553904 PMID:17558409 MGI:3715393 MGI:3716248 NCBI chrNW_004955433:11,321,504...11,423,981
Ensembl chrNW_004955433:11,322,590...11,424,569
JBrowse link
G Rxra retinoid X receptor alpha ISO (MGI:1096258|PMID:9376317) MGI PMID:9376317 MGI:1096258 NCBI chrNW_004955513:3,313,544...3,386,544
Ensembl chrNW_004955513:3,335,897...3,386,994
JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:2662556|PMID:12756179)
(MGI:2385969|PMID:12195432)
(MGI:3807419|PMID:18582859)
(MGI:3608482|PMID:16236765)
MGI PMID:12195432 PMID:12756179 PMID:16236765 PMID:18582859 MGI:2385969 MGI:2662556 MGI:3608482 MGI:3807419 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:2181466|PMID:12072567) MGI PMID:12072567 MGI:2181466 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Ski SKI proto-oncogene ISO (MGI:2176418|PMID:11731796) MGI PMID:11731796 MGI:2176418 NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
JBrowse link
G Slc25a25 solute carrier family 25 member 25 ISO (MGI:4947900|PMID:21296886) MGI PMID:21296886 MGI:4947900 NCBI chrNW_004955419:621,445...656,172
Ensembl chrNW_004955419:618,979...656,189
JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 ISO (MGI:5513052|PMID:23543054) MGI PMID:23543054 MGI:5513052 NCBI chrNW_004955404:22,738,080...22,744,601
Ensembl chrNW_004955404:22,737,974...22,745,046
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:21901792) UniProt PMID:21901792 NCBI chrNW_004955450:3,579,081...3,602,538
Ensembl chrNW_004955450:3,580,662...3,602,600
JBrowse link
G Tbc1d20 TBC1 domain family member 20 ISO (MGI:3029604|PMID:14757819) MGI PMID:14757819 MGI:3029604 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
G Tbc1d32 TBC1 domain family member 32 ISO (MGI:4439200|PMID:20159594) MGI PMID:20159594 MGI:4439200 NCBI chrNW_004955436:3,385,216...3,542,497
Ensembl chrNW_004955436:3,386,180...3,540,933
JBrowse link
G Tmem231 transmembrane protein 231 ISO (MGI:5300833|PMID:22179047) MGI PMID:22179047 MGI:5300833 NCBI chrNW_004955484:2,011,000...2,027,763
Ensembl chrNW_004955484:2,011,000...2,027,763
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan ISO (MGI:5285004|PMID:21856951) MGI PMID:21856951 MGI:5285004 NCBI chrNW_004955414:15,166,349...15,178,284
Ensembl chrNW_004955414:15,166,349...15,178,284
JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 ISO (MGI:3043486|PMID:14681194) MGI PMID:14681194 MGI:3043486 NCBI chrNW_004955402:2,652,020...2,685,350
Ensembl chrNW_004955402:2,652,020...2,686,117
JBrowse link
G Vax1 ventral anterior homeobox 1 ISO (MGI:3578573|PMID:15905411) MGI PMID:15905411 MGI:3578573 NCBI chrNW_004955431:21,853,636...21,857,547
Ensembl chrNW_004955431:21,853,636...21,857,547
JBrowse link
G Vax2 ventral anterior homeobox 2 ISO (MGI:3578573|PMID:15905411) MGI PMID:15905411 MGI:3578573 NCBI chrNW_004955424:14,283,336...14,309,809
Ensembl chrNW_004955424:14,283,327...14,309,809
JBrowse link
G Vsx2 visual system homeobox 2 ISO (MGI:3512656|PMID:15576400) MGI PMID:15576400 MGI:3512656 NCBI chrNW_004955523:1,192,035...1,207,949
Ensembl chrNW_004955523:1,193,686...1,210,641
JBrowse link
G Wdpcp WD repeat containing planar cell polarity effector ISO (MGI:5544506|PMID:24302887) MGI PMID:24302887 MGI:5544506 NCBI chrNW_004955424:20,723,592...21,114,801 JBrowse link
G Wt1 WT1 transcription factor ISO (MGI:3574744|PMID:15716344)
(MGI:2176638|PMID:11889045)
MGI PMID:11889045 PMID:15716344 MGI:2176638 MGI:3574744 NCBI chrNW_004955476:10,464,688...10,504,473
Ensembl chrNW_004955476:10,464,616...10,504,473
JBrowse link
camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp1 aquaporin 1 (Colton blood group) ISO (MGI:2180433|PMID:11891232) MGI PMID:11891232 MGI:2180433 NCBI chrNW_004955410:32,066,196...32,078,661
Ensembl chrNW_004955410:32,066,196...32,078,717
JBrowse link
G Aqp5 aquaporin 5 ISO (MGI:2180433|PMID:11891232) MGI PMID:11891232 MGI:2180433 NCBI chrNW_004955547:558,296...562,455
Ensembl chrNW_004955547:558,927...564,376
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO (MGI:1095762|PMID:9268572) MGI PMID:9268572 MGI:1095762 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:3701027|PMID:16854970)
(MGI:3610441|PMID:16154126)
MGI PMID:16154126 PMID:16854970 MGI:3610441 MGI:3701027 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
JBrowse link
G Col8a1 collagen type VIII alpha 1 chain ISO (MGI:3587134|PMID:16051690) MGI PMID:16051690 MGI:3587134 NCBI chrNW_004955427:1,187,550...1,335,794
Ensembl chrNW_004955427:1,187,550...1,335,794
JBrowse link
G Col8a2 collagen type VIII alpha 2 chain ISO (MGI:3587134|PMID:16051690) MGI PMID:16051690 MGI:3587134 NCBI chrNW_004955452:14,127,654...14,149,582
Ensembl chrNW_004955452:14,127,630...14,155,212
JBrowse link
G Ephb1 EPH receptor B1 ISO (MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:2675767 NCBI chrNW_004955501:3,424,112...3,821,727
Ensembl chrNW_004955501:3,423,977...3,821,890
JBrowse link
G Ephb2 EPH receptor B2 ISO (MGI:2675767|PMID:12971893) MGI PMID:12971893 MGI:2675767 NCBI chrNW_004955452:2,844,713...2,986,790
Ensembl chrNW_004955452:2,844,713...2,980,445
JBrowse link
G Fat1 FAT atypical cadherin 1 ISO (MGI:5766588|PMID:26114487) MGI PMID:26114487 MGI:5766588 NCBI chrNW_004955403:22,502,625...22,618,513
Ensembl chrNW_004955403:22,502,625...22,619,211
JBrowse link
G Gdf11 growth differentiation factor 11 ISO (MGI:3581514|PMID:15976303) MGI PMID:15976303 MGI:3581514 NCBI chrNW_004955458:3,388,402...3,398,040
Ensembl chrNW_004955458:3,388,402...3,398,040
JBrowse link
G Gli3 GLI family zinc finger 3 ISO (MGI:52587|PMID:8387379) MGI PMID:8387379 MGI:52587 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO (MGI:5429122|PMID:22627278) MGI PMID:22627278 MGI:5429122 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Ift122 intraflagellar transport 122 ISO (MGI:3827087|PMID:19000668) UniProt PMID:19000668 MGI:3827087 NCBI chrNW_004955429:17,795,757...17,858,609
Ensembl chrNW_004955429:17,794,879...17,858,609
JBrowse link
G LOC102009926 chromosome unknown open reading frame, human C12orf57 involved_in ISO (PMID:23453665), (PMID:23633300), (PMID:24798461) UniProt PMID:23453665 PMID:23633300 PMID:24798461 NCBI chrNW_004955413:4,524,236...4,525,760
Ensembl chrNW_004955413:4,524,236...4,525,760
JBrowse link
G Mfn2 mitofusin 2 ISO (MGI:3589043|PMID:16104381) MGI PMID:16104381 MGI:3589043 NCBI chrNW_004955486:1,937,873...1,962,577
Ensembl chrNW_004955486:1,937,802...1,962,772
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO (MGI:3604842|PMID:15728677) MGI PMID:15728677 MGI:3604842 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069
JBrowse link
G Nf1 neurofibromin 1 ISO (MGI:66069|PMID:7926784) MGI PMID:7926784 MGI:66069 NCBI chrNW_004955481:6,145,855...6,404,179
Ensembl chrNW_004955481:6,145,855...6,404,179
JBrowse link
G Ring1 ring finger protein 1 ISO (MGI:3628673|PMID:16624538) MGI PMID:16624538 MGI:3628673 NCBI chrNW_004955437:1,782,156...1,785,811
Ensembl chrNW_004955437:1,782,115...1,788,842
JBrowse link
G Ski SKI proto-oncogene ISO (MGI:3693412|PMID:17003410) MGI PMID:17003410 MGI:3693412 NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
JBrowse link
G Tenm3 teneurin transmembrane protein 3 involved_in ISO (PMID:22766609) UniProt PMID:22766609 NCBI chrNW_004955403:25,920,919...26,534,817
Ensembl chrNW_004955403:25,923,750...26,365,894
JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:3607459|PMID:16251428) MGI PMID:16251428 MGI:3607459 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO (MGI:5429122|PMID:22627278) MGI PMID:22627278 MGI:5429122 NCBI chrNW_004955561:1,573,525...1,578,295
Ensembl chrNW_004955561:1,573,525...1,580,511
JBrowse link
G Yy1 YY1 transcription factor ISO (MGI:3628673|PMID:16624538) MGI PMID:16624538 MGI:3628673 NCBI chrNW_004955438:21,341,374...21,377,674 JBrowse link
camera-type eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prom1 prominin 1 involved_in ISO (MGI:3838023|PMID:19228982)
(PMID:18654668)
UniProt
BHF-UCL
PMID:18654668 PMID:19228982 MGI:3838023 NCBI chrNW_004955480:7,955,501...8,059,537
Ensembl chrNW_004955480:7,961,389...8,059,589
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:4437581|PMID:20300562) MGI PMID:20300562 MGI:4437581 NCBI chrNW_004955599:578,165...580,055
Ensembl chrNW_004955599:573,426...579,812
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 ISO (MGI:5693671|PMID:26287463) UniProt PMID:26287463 MGI:5693671 NCBI chrNW_004955553:353,190...614,806
Ensembl chrNW_004955553:357,112...614,811
JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO (MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:2680888 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 ISO (MGI:5014119|PMID:21646512) MGI PMID:21646512 MGI:5014119 NCBI chrNW_004955438:11,410,196...11,466,044
Ensembl chrNW_004955438:11,409,982...11,466,523
JBrowse link
camera-type eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog signaling molecule ISO (MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:3807419 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747
JBrowse link
ciliary body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jag1 jagged canonical Notch ligand 1 ISO (MGI:5492288|PMID:23676271) MGI PMID:23676271 MGI:5492288 NCBI chrNW_004955415:20,490,414...20,526,068
Ensembl chrNW_004955415:20,490,414...20,527,917
JBrowse link
G Notch2 notch receptor 2 ISO (MGI:5492288|PMID:23676271) MGI PMID:23676271 MGI:5492288 NCBI chrNW_004955568:1,660,357...1,812,285
Ensembl chrNW_004955568:1,660,731...1,809,173
JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan ISO (MGI:5285004|PMID:21856951) MGI PMID:21856951 MGI:5285004 NCBI chrNW_004955414:15,166,349...15,178,284
Ensembl chrNW_004955414:15,166,349...15,178,284
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO (MGI:5429122|PMID:22627278) MGI PMID:22627278 MGI:5429122 NCBI chrNW_004955561:1,573,525...1,578,295
Ensembl chrNW_004955561:1,573,525...1,580,511
JBrowse link
closure of optic fissure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Phactr4 phosphatase and actin regulator 4 ISO (MGI:3719969|PMID:17609112) UniProt PMID:17609112 MGI:3719969 NCBI chrNW_004955452:7,505,647...7,593,302
Ensembl chrNW_004955452:7,532,966...7,596,546
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO (MGI:3797299|PMID:18423449) UniProt PMID:18423449 MGI:3797299 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521
JBrowse link
cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kera keratocan ISO (MGI:1855733|PMID:10802664) MGI PMID:10802664 MGI:1855733 NCBI chrNW_004955405:28,256,054...28,263,559
Ensembl chrNW_004955405:28,256,001...28,263,600
JBrowse link
G Limk2 LIM domain kinase 2 ISO (MGI:5646594|PMID:26234751) MGI PMID:26234751 MGI:5646594 NCBI chrNW_004955455:5,406,085...5,473,418
Ensembl chrNW_004955455:5,405,940...5,473,418
JBrowse link
G Pax6 paired box 6 involved_in ISO (PMID:7550230) DFLAT PMID:7550230 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO (MGI:3797299|PMID:18423449) UniProt PMID:18423449 MGI:3797299 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (MGI:3610667|PMID:16186342) MGI PMID:16186342 MGI:3610667 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
G Twist2 twist family bHLH transcription factor 2 ISO (MGI:4949824|PMID:20574024) MGI PMID:20574024 MGI:4949824 NCBI chrNW_004955542:1,959,765...2,000,665
Ensembl chrNW_004955542:1,959,765...2,000,665
JBrowse link
embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 ISO (MGI:3700411|PMID:17184764) MGI PMID:17184764 MGI:3700411 NCBI chrNW_004955450:16,406,578...16,453,048
Ensembl chrNW_004955450:16,406,436...16,453,180
JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 ISO (MGI:3042765|PMID:14623956)
(MGI:3700411|PMID:17184764)
UniProt
MGI
PMID:14623956 PMID:17184764 MGI:3042765 MGI:3700411 NCBI chrNW_004955416:27,823,611...27,858,112
Ensembl chrNW_004955416:27,823,611...27,858,173
JBrowse link
G Fgf10 fibroblast growth factor 10 ISO (MGI:3588480|PMID:15958512) MGI PMID:15958512 MGI:3588480 NCBI chrNW_004955446:18,163,117...18,244,840
Ensembl chrNW_004955446:18,163,117...18,245,199
JBrowse link
G Fzd5 frizzled class receptor 5 ISO (MGI:3821812|PMID:18791178) MGI PMID:18791178 MGI:3821812 NCBI chrNW_004955457:7,282,403...7,288,918
Ensembl chrNW_004955457:7,282,403...7,288,918
JBrowse link
G Ift140 intraflagellar transport 140 ISO (MGI:5505384|PMID:23469164) MGI PMID:23469164 MGI:5505384 NCBI chrNW_004955442:15,625,429...15,719,006
Ensembl chrNW_004955442:15,630,501...15,718,484
JBrowse link
G Pitx2 paired like homeodomain 2 ISO (MGI:1347482|PMID:10572050)
(MGI:1344731|PMID:10498698)
MGI PMID:10498698 PMID:10572050 MGI:1344731 MGI:1347482 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310
JBrowse link
G Ppp1r13l protein phosphatase 1 regulatory subunit 13 like ISO (MGI:3530389|PMID:15661756) MGI PMID:15661756 MGI:3530389 NCBI chrNW_004955555:2,373,088...2,390,973
Ensembl chrNW_004955555:2,372,259...2,389,626
JBrowse link
G Rara retinoic acid receptor alpha ISO (MGI:69060|PMID:7607067) MGI PMID:7607067 MGI:69060 NCBI chrNW_004955451:14,876,663...14,917,134
Ensembl chrNW_004955451:14,897,726...14,917,134
JBrowse link
G Rarg retinoic acid receptor gamma ISO (MGI:69060|PMID:7607067) MGI PMID:7607067 MGI:69060 NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
JBrowse link
G Rdh10 retinol dehydrogenase 10 ISO (MGI:3709664|PMID:17473173) MGI PMID:17473173 MGI:3709664 NCBI chrNW_004955444:6,878,722...6,909,421
Ensembl chrNW_004955444:6,878,722...6,909,421
JBrowse link
G Traf3ip1 TRAF3 interacting protein 1 ISO (MGI:5298450|PMID:21945076) MGI PMID:21945076 MGI:5298450 NCBI chrNW_004955542:2,264,472...2,301,083
Ensembl chrNW_004955542:2,265,901...2,301,215
JBrowse link
G Tulp3 TUB like protein 3 ISO (MGI:3841503|PMID:19286674) MGI PMID:19286674 MGI:3841503 NCBI chrNW_004955429:18,424,912...18,484,522
Ensembl chrNW_004955429:18,453,311...18,482,400
JBrowse link
G Wdr19 WD repeat domain 19 ISO (MGI:5314316|PMID:22228095) MGI PMID:22228095 MGI:5314316 NCBI chrNW_004955443:8,053,847...8,122,918
Ensembl chrNW_004955443:8,053,847...8,123,110
JBrowse link
embryonic camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) DFLAT PMID:17273977 NCBI chrNW_004955450:3,579,081...3,602,538
Ensembl chrNW_004955450:3,580,662...3,602,600
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17070479) BHF-UCL PMID:17070479 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 ISO (MGI:1332362|PMID:10049573) MGI PMID:10049573 MGI:1332362 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 ISO (MGI:3807101|PMID:18653562) MGI PMID:18653562 MGI:3807101 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677
JBrowse link
G Cryaa crystallin alpha A ISO (MGI:3775669|PMID:18056999) MGI PMID:18056999 MGI:3775669 NCBI chrNW_004955407:38,880,088...38,892,946 JBrowse link
G Foxf2 forkhead box F2 ISO (MGI:5297296|PMID:22022403) BHF-UCL PMID:22022403 MGI:5297296 NCBI chrNW_004955465:11,740,374...11,744,619
Ensembl chrNW_004955465:11,740,323...11,744,619
JBrowse link
G Fzd5 frizzled class receptor 5 ISO (MGI:3826935|PMID:18832390) CACAO PMID:18832390 MGI:3826935 NCBI chrNW_004955457:7,282,403...7,288,918
Ensembl chrNW_004955457:7,282,403...7,288,918
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Ift122 intraflagellar transport 122 ISO (MGI:6094959|PMID:28778798) MGI PMID:28778798 MGI:6094959 NCBI chrNW_004955429:17,795,757...17,858,609
Ensembl chrNW_004955429:17,794,879...17,858,609
JBrowse link
G Ift172 intraflagellar transport 172 ISO (MGI:6094959|PMID:28778798) MGI PMID:28778798 MGI:6094959 NCBI chrNW_004955469:9,418,599...9,455,026
Ensembl chrNW_004955469:9,418,609...9,455,026
JBrowse link
G Ihh Indian hedgehog signaling molecule ISO (MGI:3807419|PMID:18582859) MGI PMID:18582859 MGI:3807419 NCBI chrNW_004955453:14,376,665...14,382,536
Ensembl chrNW_004955453:14,376,718...14,381,747
JBrowse link
G Kdm2b lysine demethylase 2B ISO (MGI:4949568|PMID:21220025) BHF-UCL PMID:21220025 MGI:4949568 NCBI chrNW_004955482:6,774,021...6,885,113
Ensembl chrNW_004955482:6,774,059...6,887,171
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO (MGI:3823171|PMID:18985738)
(MGI:4413396|PMID:19653321)
MGI PMID:18985738 PMID:19653321 MGI:3823171 MGI:4413396 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
G Pax6 paired box 6 ISO (MGI:3807101|PMID:18653562) MGI PMID:18653562 MGI:3807101 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Sp1 Sp1 transcription factor ISO (MGI:3717030|PMID:17584888) MGI PMID:17584888 MGI:3717030 NCBI chrNW_004955458:644,435...677,360
Ensembl chrNW_004955458:644,378...677,441
JBrowse link
G Sp3 Sp3 transcription factor ISO (MGI:3717030|PMID:17584888) MGI PMID:17584888 MGI:3717030 NCBI chrNW_004955449:1,347,781...1,404,368 JBrowse link
G Tbx2 T-box transcription factor 2 ISO (MGI:3487212|PMID:15459098) BHF-UCL PMID:15459098 MGI:3487212 NCBI chrNW_004955451:2,458,612...2,466,264
Ensembl chrNW_004955451:2,457,568...2,466,639
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (MGI:1313057|PMID:9811866) MGI PMID:9811866 MGI:1313057 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
G Th tyrosine hydroxylase ISO (MGI:3617102|PMID:16445854) BHF-UCL PMID:16445854 MGI:3617102 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 ISO (MGI:3790562|PMID:18436818) MGI PMID:18436818 MGI:3790562 NCBI chrNW_004955429:23,011,627...23,198,188
Ensembl chrNW_004955429:23,010,790...23,198,250
JBrowse link
embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 ISO (MGI:3608158|PMID:16207763)
(MGI:3624188|PMID:16611695)
(MGI:3608158|PMID:16207763), (MGI:3624188|PMID:16611695)
MGI PMID:16207763 PMID:16611695 MGI:3608158 MGI:3624188 NCBI chrNW_004955416:27,823,611...27,858,112
Ensembl chrNW_004955416:27,823,611...27,858,173
JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955424:27,181,717...27,240,067
Ensembl chrNW_004955424:27,181,099...27,240,446
JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955409:5,281,603...5,502,547
Ensembl chrNW_004955409:5,281,603...5,504,761
JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955415:1,307,553...1,535,435
Ensembl chrNW_004955415:1,309,077...1,537,052
JBrowse link
G Foxl2 forkhead box L2 ISO (MGI:3043431|PMID:15056605) MGI PMID:15056605 MGI:3043431 NCBI chrNW_004955501:83,965...84,476 JBrowse link
G Mfap2 microfibril associated protein 2 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955527:1,826,528...1,832,058
Ensembl chrNW_004955527:1,826,528...1,832,052
JBrowse link
G Rarb retinoic acid receptor beta ISO (MGI:3608158|PMID:16207763) MGI PMID:16207763 MGI:3608158 NCBI chrNW_004955430:17,067,536...17,457,558
Ensembl chrNW_004955430:17,295,174...17,460,045
JBrowse link
G Rarg retinoic acid receptor gamma ISO (MGI:3608158|PMID:16207763) MGI PMID:16207763 MGI:3608158 NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
JBrowse link
G Vax2 ventral anterior homeobox 2 ISO (MGI:2157790|PMID:11830579)
(MGI:1349226|PMID:10595508)
MGI PMID:10595508 PMID:11830579 MGI:1349226 MGI:2157790 NCBI chrNW_004955424:14,283,336...14,309,809
Ensembl chrNW_004955424:14,283,327...14,309,809
JBrowse link
embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdon cell adhesion associated, oncogene regulated ISO (MGI:4422144|PMID:19754878) MGI PMID:19754878 MGI:4422144 NCBI chrNW_004955412:27,004,391...27,093,968
Ensembl chrNW_004955412:27,003,919...27,065,989
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Lhx1 LIM homeobox 1 ISO (MGI:3772525|PMID:18094249) UniProt PMID:18094249 MGI:3772525 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO (MGI:4413396|PMID:19653321) MGI PMID:19653321 MGI:4413396 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:12692551) BHF-UCL PMID:12692551 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Rbp4 retinol binding protein 4 ISO (MGI:1344892|PMID:10469643) BHF-UCL PMID:10469643 MGI:1344892 NCBI chrNW_004955507:112,342...120,050
Ensembl chrNW_004955507:108,669...120,584
JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 ISO (MGI:5766588|PMID:26114487) MGI PMID:26114487 MGI:5766588 NCBI chrNW_004955403:22,502,625...22,618,513
Ensembl chrNW_004955403:22,502,625...22,619,211
JBrowse link
extraocular skeletal muscle development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1s calcium voltage-gated channel subunit alpha1 S ISO (MGI:3613415|PMID:14618389) MGI PMID:14618389 MGI:3613415 NCBI chrNW_004955406:37,201,180...37,263,328
Ensembl chrNW_004955406:37,201,180...37,263,371
JBrowse link
G Foxl2 forkhead box L2 involved_in ISO (PMID:12630957) UniProt PMID:12630957 NCBI chrNW_004955501:83,965...84,476 JBrowse link
G Myh15 myosin heavy chain 15 ISO RGD PMID:19948655 RGD:2317122 NCBI chrNW_004955427:9,257,716...9,400,526
Ensembl chrNW_004955427:9,259,811...9,400,526
JBrowse link
G Myom1 myomesin 1 ISO RGD PMID:12878677 RGD:633368 NCBI chrNW_004955402:7,293,415...7,418,226
Ensembl chrNW_004955402:7,297,502...7,417,583
JBrowse link
G Myom2 myomesin 2 ISO RGD PMID:12878677 RGD:633368 NCBI chrNW_004955403:57,718,120...57,783,338
Ensembl chrNW_004955403:57,717,151...57,772,254
JBrowse link
G Pitx2 paired like homeodomain 2 ISO (MGI:3624183|PMID:16638982)
(MGI:4881620|PMID:21035439)
MGI PMID:16638982 PMID:21035439 MGI:3624183 MGI:4881620 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310
JBrowse link
eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb5 ATP binding cassette subfamily B member 5 ISO (MGI:5585659|PMID:25030174) UniProt PMID:25030174 MGI:5585659 NCBI chrNW_004955410:23,283,263...23,379,000
Ensembl chrNW_004955410:23,283,263...23,379,000
JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif 18 involved_in ISO (PMID:23818446) UniProt PMID:23818446 NCBI chrNW_004955522:530,752...666,752
Ensembl chrNW_004955522:532,534...666,523
JBrowse link
G Atf6 activating transcription factor 6 involved_in ISO (PMID:26029869) UniProt PMID:26029869 NCBI chrNW_004955462:14,352,956...14,553,299
Ensembl chrNW_004955462:14,357,945...14,548,543
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 ISO (MGI:5314314|PMID:22228099) MGI PMID:22228099 MGI:5314314 NCBI chrNW_004955428:18,682,072...18,724,560
Ensembl chrNW_004955428:18,681,856...18,724,560
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 involved_in ISO (PMID:16385460) UniProt PMID:16385460 NCBI chrNW_004955555:2,183,752...2,186,154
Ensembl chrNW_004955555:2,184,490...2,185,138
JBrowse link
G Bmp4 bone morphogenetic protein 4 NOT ISO (MGI:3610441|PMID:16154126) UniProt PMID:16154126 MGI:3610441 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO (MGI:3610441|PMID:16154126) UniProt PMID:16154126 MGI:3610441 NCBI chrNW_004955465:6,053,600...6,201,254
Ensembl chrNW_004955465:6,054,931...6,200,377
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO (MGI:3610441|PMID:16154126) UniProt PMID:16154126 MGI:3610441 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (MGI:2181740|PMID:12117821) MGI PMID:12117821 MGI:2181740 NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957
JBrowse link
G Chrdl1 chordin like 1 involved_in ISO (PMID:22284829) UniProt PMID:22284829 NCBI chrNW_004955490:5,108,308...5,218,679
Ensembl chrNW_004955490:5,108,308...5,257,445
JBrowse link
G Cst3 cystatin C ISO RGD PMID:11431459 RGD:2306512 NCBI chrNW_004955415:30,507,972...30,512,109 JBrowse link
G Fgf9 fibroblast growth factor 9 ISO (MGI:5291533|PMID:21858205) CACAO PMID:21858205 MGI:5291533 NCBI chrNW_004955497:2,199,424...2,232,088
Ensembl chrNW_004955497:2,199,409...2,235,893
JBrowse link
G Frem2 FRAS1 related extracellular matrix 2 involved_in ISO (MGI:6368066|PMID:30802441)
(PMID:29688405), (PMID:30802441)
(MGI:5646594|PMID:26234751)
UniProt
MGI
PMID:26234751 PMID:29688405 PMID:30802441 MGI:5646594 MGI:6368066 NCBI chrNW_004955431:7,364,937...7,541,419
Ensembl chrNW_004955431:7,364,937...7,541,648
JBrowse link
G Gdf3 growth differentiation factor 3 involved_in ISO (PMID:19864492) UniProt PMID:19864492 NCBI chrNW_004955413:6,493,734...6,516,315 JBrowse link
G Hmgb1 high mobility group box 1 ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chrNW_004955431:15,373,207...15,377,339
Ensembl chrNW_004955431:15,373,207...15,377,339
JBrowse link
G Hsf4 heat shock transcription factor 4 ISO (MGI:3056236|PMID:15343150) MGI PMID:15343150 MGI:3056236 NCBI chrNW_004955484:9,447,641...9,452,784
Ensembl chrNW_004955484:9,447,641...9,452,784
JBrowse link
G Ift88 intraflagellar transport 88 ISO (MGI:5314314|PMID:22228099) MGI PMID:22228099 MGI:5314314 NCBI chrNW_004955497:1,338,959...1,454,788
Ensembl chrNW_004955497:1,338,904...1,455,122
JBrowse link
G LOC106146232 protein SCO2 homolog, mitochondrial involved_in ISO (PMID:23643385) UniProt PMID:23643385 NCBI chrNW_004955413:33,503,882...33,505,417 JBrowse link
G Mab21l1 mab-21 like 1 involved_in ISO (PMID:27103078), (PMID:30487245) UniProt PMID:27103078 PMID:30487245 NCBI chrNW_004955431:10,570,656...10,573,618
Ensembl chrNW_004955431:10,571,712...10,572,791
JBrowse link
G Mab21l2 mab-21 like 2 involved_in ISO (PMID:24906020), (PMID:25719200) UniProt PMID:24906020 PMID:25719200 NCBI chrNW_004955471:5,296,292...5,298,432
Ensembl chrNW_004955471:5,297,259...5,298,338
JBrowse link
G Meis2 Meis homeobox 2 ISO (MGI:2384485|PMID:12183364) MGI PMID:12183364 MGI:2384485 NCBI chrNW_004955416:4,104,114...4,311,791 JBrowse link
G Rbp4 retinol binding protein 4 involved_in ISO (MGI:3604178|PMID:15994349)
(PMID:10232633)
BHF-UCL PMID:10232633 PMID:15994349 MGI:3604178 NCBI chrNW_004955507:112,342...120,050
Ensembl chrNW_004955507:108,669...120,584
JBrowse link
G Sall2 spalt like transcription factor 2 involved_in ISO (PMID:24412933) UniProt PMID:24412933 NCBI chrNW_004955550:2,236,129...2,250,829
Ensembl chrNW_004955550:2,237,677...2,250,829
JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (MGI:4439252|PMID:20137777)
(PMID:20137777)
UniProt PMID:20137777 MGI:4439252 NCBI chrNW_004955408:25,103,278...25,169,934
Ensembl chrNW_004955408:25,103,278...25,170,003
JBrowse link
G Sipa1l3 signal induced proliferation associated 1 like 3 ISO (MGI:5697095|PMID:26231217) UniProt PMID:26231217 MGI:5697095 NCBI chrNW_004955468:1,212,102...1,438,527
Ensembl chrNW_004955468:1,212,102...1,438,527
JBrowse link
G Six3 SIX homeobox 3 involved_in ISO (MGI:2182264|PMID:12050133)
(PMID:18791198)
MGI
UniProt
PMID:12050133 PMID:18791198 MGI:2182264 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Slc39a5 solute carrier family 39 member 5 involved_in ISO (PMID:24891338) UniProt PMID:24891338 NCBI chrNW_004955458:3,843,492...3,849,794
Ensembl chrNW_004955458:3,843,112...3,849,794
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor ISO (MGI:5775676|PMID:27018474) UniProt PMID:27018474 MGI:5775676 NCBI chrNW_004955555:1,463,031...1,481,411
Ensembl chrNW_004955555:1,459,451...1,481,411
JBrowse link
G Smoc1 SPARC related modular calcium binding 1 involved_in ISO (MGI:4939981|PMID:21194678)
(PMID:21194678)
UniProt PMID:21194678 MGI:4939981 NCBI chrNW_004955466:378,277...528,260
Ensembl chrNW_004955466:378,277...528,260
JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in ISO (PMID:18285410) UniProt PMID:18285410 NCBI chrNW_004955420:10,671,888...10,674,080
Ensembl chrNW_004955420:10,671,978...10,672,934
JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (PMID:15944186) UniProt PMID:15944186 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
G Zdhhc16 zinc finger DHHC-type palmitoyltransferase 16 ISO (MGI:5706675|PMID:26644582) UniProt PMID:26644582 MGI:5706675 NCBI chrNW_004955507:3,583,306...3,593,222
Ensembl chrNW_004955507:3,583,307...3,593,222
JBrowse link
eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col5a1 collagen type V alpha 1 chain involved_in ISO (PMID:16431952) UniProt PMID:16431952 NCBI chrNW_004955513:3,533,612...3,660,605
Ensembl chrNW_004955513:3,533,614...3,658,161
JBrowse link
G Col5a2 collagen type V alpha 2 chain involved_in ISO (PMID:16431952) UniProt PMID:16431952 NCBI chrNW_004955403:9,562,401...9,703,828
Ensembl chrNW_004955403:9,562,401...9,703,828
JBrowse link
G Gas1 growth arrest specific 1 ISO (MGI:2138055|PMID:11456441) MGI PMID:11456441 MGI:2138055 NCBI chrNW_004955432:727,784...729,096 JBrowse link
G Nipbl NIPBL cohesin loading factor involved_in ISO (PMID:8291537) BHF-UCL PMID:8291537 NCBI chrNW_004955426:21,666,958...21,841,515
Ensembl chrNW_004955426:21,666,857...21,841,515
JBrowse link
G Stau2 staufen double-stranded RNA binding protein 2 ISO RGD PMID:22940085 RGD:10043154 NCBI chrNW_004955444:6,538,310...6,777,132
Ensembl chrNW_004955444:6,538,310...6,778,708
JBrowse link
eye photoreceptor cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chrNW_004955439:1,277,185...1,460,296
Ensembl chrNW_004955439:1,276,760...1,474,202
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:2675211|PMID:12915475)
(MGI:4849309|PMID:21052544)
MGI PMID:12915475 PMID:21052544 MGI:2675211 MGI:4849309 NCBI chrNW_004955406:33,817,754...34,005,937
Ensembl chrNW_004955406:33,817,605...34,005,943
JBrowse link
G Fscn2 fascin actin-bundling protein 2, retinal ISO (MGI:3610644|PMID:16043865) MGI PMID:16043865 MGI:3610644 NCBI chrNW_004955506:1,526,830...1,533,775
Ensembl chrNW_004955506:1,526,830...1,533,775
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (MGI:3609280|PMID:16249514) MGI PMID:16249514 MGI:3609280 NCBI chrNW_004955532:2,018,850...2,023,603
Ensembl chrNW_004955532:2,018,850...2,023,603
JBrowse link
G Gngt1 G protein subunit gamma transducin 1 ISO (MGI:3778702|PMID:18367617) MGI PMID:18367617 MGI:3778702 NCBI chrNW_004955432:10,653,508...10,657,811
Ensembl chrNW_004955432:10,643,674...10,658,933
JBrowse link
G Mfrp membrane frizzled-related protein ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955412:20,421,935...20,426,760
Ensembl chrNW_004955412:20,421,935...20,426,760
JBrowse link
G Nr2e3 nuclear receptor subfamily 2 group E member 3 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955450:5,281,707...5,286,260
Ensembl chrNW_004955450:5,281,707...5,286,260
JBrowse link
G Olfm3 olfactomedin 3 ISO RGD PMID:12019210 RGD:633402 NCBI chrNW_004955435:6,464,283...6,655,695
Ensembl chrNW_004955435:6,462,903...6,655,801
JBrowse link
G Pax6 paired box 6 ISO (MGI:2654287|PMID:12648492) MGI PMID:12648492 MGI:2654287 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO (MGI:5607451|PMID:25224828) MGI PMID:25224828 MGI:5607451 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
G Prdm1 PR/SET domain 1 ISO (MGI:4454584|PMID:20463215) MGI PMID:20463215 MGI:4454584 NCBI chrNW_004955411:31,434,503...31,455,995
Ensembl chrNW_004955411:31,434,503...31,456,056
JBrowse link
G Prkci protein kinase C iota ISO (MGI:3607414|PMID:16267237) MGI PMID:16267237 MGI:3607414 NCBI chrNW_004955420:423,406...486,676
Ensembl chrNW_004955420:423,140...489,592
JBrowse link
G Rdh13 retinol dehydrogenase 13 ISO (MGI:5462166|PMID:22605914) MGI PMID:22605914 MGI:5462166 NCBI chrNW_004955567:1,091,636...1,108,648
Ensembl chrNW_004955567:1,091,636...1,108,732
JBrowse link
G Rorb RAR related orphan receptor B ISO (MGI:3652638|PMID:16574740) UniProt PMID:16574740 MGI:3652638 NCBI chrNW_004955512:4,362,287...4,541,432
Ensembl chrNW_004955512:4,362,287...4,541,445
JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator ISO (MGI:2654998|PMID:12651948) MGI PMID:12651948 MGI:2654998 NCBI chrNW_004955601:398,772...453,271 JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (MGI:2654998|PMID:12651948) MGI PMID:12651948 MGI:2654998 NCBI chrNW_004955550:2,015,319...2,073,627
Ensembl chrNW_004955550:2,021,838...2,073,498
JBrowse link
G Th tyrosine hydroxylase ISO (MGI:3617102|PMID:16445854) BHF-UCL PMID:16445854 MGI:3617102 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
G Tulp1 TUB like protein 1 ISO (MGI:4397555|PMID:19218615) UniProt PMID:19218615 MGI:4397555 NCBI chrNW_004955437:3,405,218...3,417,079 JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:3607459|PMID:16251428) MGI PMID:16251428 MGI:3607459 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
eye photoreceptor cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha involved_in ISO (PMID:15687260) BHF-UCL PMID:15687260 NCBI chrNW_004955501:2,648,017...2,751,999
Ensembl chrNW_004955501:2,648,017...2,752,057
JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO (MGI:3045481|PMID:15207851) MGI PMID:15207851 MGI:3045481 NCBI chrNW_004955451:16,320,326...16,348,505
Ensembl chrNW_004955451:16,319,904...16,357,687
JBrowse link
eye photoreceptor cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otx2 orthodenticle homeobox 2 ISO (MGI:2680889|PMID:14625556) MGI PMID:14625556 MGI:2680889 NCBI chrNW_004955466:10,755,143...10,764,957
Ensembl chrNW_004955466:10,755,012...10,765,095
JBrowse link
eyelid development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egfr epidermal growth factor receptor ISO (MGI:85697|PMID:9030684) MGI PMID:9030684 MGI:85697 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Grhl3 grainyhead like transcription factor 3 ISO (MGI:4947318|PMID:21262862) MGI PMID:21262862 MGI:4947318 NCBI chrNW_004955452:4,125,792...4,159,699
Ensembl chrNW_004955452:4,128,269...4,160,683
JBrowse link
G Hdac1 histone deacetylase 1 ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chrNW_004955452:10,636,366...10,668,873
Ensembl chrNW_004955452:10,636,366...10,670,864
JBrowse link
G Hdac2 histone deacetylase 2 ISO (MGI:4889029|PMID:21093383) BHF-UCL PMID:21093383 MGI:4889029 NCBI chrNW_004955526:2,739,099...2,759,640
Ensembl chrNW_004955526:2,728,377...2,759,707
JBrowse link
G Inhba inhibin subunit beta A ISO (MGI:2682175|PMID:14551263) UniProt PMID:14551263 MGI:2682175 NCBI chrNW_004955460:2,054,879...2,066,628
Ensembl chrNW_004955460:2,046,588...2,066,609
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO (MGI:5608927|PMID:25224220) MGI PMID:25224220 MGI:5608927 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Kmt2c lysine methyltransferase 2C ISO (MGI:3692812|PMID:17021013) MGI PMID:17021013 MGI:3692812 NCBI chrNW_004955491:6,245,408...6,420,535
Ensembl chrNW_004955491:6,247,249...6,402,470
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO (MGI:5467663|PMID:23201579), (MGI:5608927|PMID:25224220) MGI PMID:23201579 PMID:25224220 MGI:5467663 MGI:5608927 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136
JBrowse link
G Osr2 odd-skipped related transciption factor 2 ISO (MGI:3848564|PMID:19389375) UniProt PMID:19389375 MGI:3848564 NCBI chrNW_004955417:14,502,450...14,510,015
Ensembl chrNW_004955417:14,502,451...14,510,160
JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 ISO (MGI:85697|PMID:9030684) MGI PMID:9030684 MGI:85697 NCBI chrNW_004955441:6,649,895...6,724,271
Ensembl chrNW_004955441:6,646,385...6,713,028
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO (MGI:3052265|PMID:15254231) UniProt PMID:15254231 MGI:3052265 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521
JBrowse link
G Srf serum response factor ISO (MGI:4421610|PMID:20047077) MGI PMID:20047077 MGI:4421610 NCBI chrNW_004955437:9,100,546...9,109,305
Ensembl chrNW_004955437:9,098,968...9,107,057
JBrowse link
G Stra6 signaling receptor and transporter of retinol STRA6 involved_in ISO (PMID:17273977) DFLAT PMID:17273977 NCBI chrNW_004955450:3,579,081...3,602,538
Ensembl chrNW_004955450:3,580,662...3,602,600
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (MGI:1313057|PMID:9811866) UniProt PMID:9811866 MGI:1313057 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17070479) BHF-UCL PMID:17070479 NCBI chrNW_004955410:22,003,981...22,005,483 JBrowse link
horizontal cell localization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lhx1 LIM homeobox 1 ISO (MGI:3772525|PMID:18094249) UniProt PMID:18094249 MGI:3772525 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
hyaloid vascular plexus regression term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Drd2 dopamine receptor D2 ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004955412:15,054,255...15,114,558
Ensembl chrNW_004955412:15,054,038...15,114,573
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004955497:7,653,309...7,831,737
Ensembl chrNW_004955497:7,653,248...7,831,472
JBrowse link
G Ninj1 ninjurin 1 ISO (MGI:4940188|PMID:19557008) MGI PMID:19557008 MGI:4940188 NCBI chrNW_004955515:4,892,748...4,905,627
Ensembl chrNW_004955515:4,892,039...4,907,323
JBrowse link
G Opn4 opsin 4 ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004955510:5,723,804...5,736,070
Ensembl chrNW_004955510:5,724,120...5,736,135
JBrowse link
G Opn5 opsin 5 ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004955437:12,171,544...12,197,409
Ensembl chrNW_004955437:12,171,544...12,213,264
JBrowse link
G Slc17a6 solute carrier family 17 member 6 ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004955476:2,813,368...2,854,371
Ensembl chrNW_004955476:2,813,368...2,854,514
JBrowse link
G Slc6a3 solute carrier family 6 member 3 ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004955504:721,470...747,553
Ensembl chrNW_004955504:721,429...747,630
JBrowse link
G Th tyrosine hydroxylase ISO (MGI:6359287|PMID:30936473) UniProt PMID:30936473 MGI:6359287 NCBI chrNW_004955422:13,943,590...13,951,102
Ensembl chrNW_004955422:13,943,552...13,951,137
JBrowse link
iris morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hif1a hypoxia inducible factor 1 subunit alpha ISO (MGI:5429122|PMID:22627278) MGI PMID:22627278 MGI:5429122 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Pax6 paired box 6 involved_in ISO (PMID:7550230) DFLAT PMID:7550230 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Pitx2 paired like homeodomain 2 involved_in ISO (PMID:9437321) BHF-UCL PMID:9437321 NCBI chrNW_004955457:15,803,493...15,823,193
Ensembl chrNW_004955457:15,803,219...15,823,310
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO (MGI:5429122|PMID:22627278) MGI PMID:22627278 MGI:5429122 NCBI chrNW_004955561:1,573,525...1,578,295
Ensembl chrNW_004955561:1,573,525...1,580,511
JBrowse link
lens development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Birc7 baculoviral IAP repeat containing 7 ISO (MGI:5766584|PMID:26218911) MGI PMID:26218911 MGI:5766584 NCBI chrNW_004955528:919,246...922,581
Ensembl chrNW_004955528:919,246...922,619
JBrowse link
G Casp6 caspase 6 ISO RGD PMID:15161922 RGD:2301319 NCBI chrNW_004955496:575,839...584,287
Ensembl chrNW_004955496:577,832...584,287
JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO RGD PMID:10620399 RGD:724665 NCBI chrNW_004955458:3,555,603...3,561,063
Ensembl chrNW_004955458:3,555,603...3,562,120
JBrowse link
G Cdk4 cyclin dependent kinase 4 ISO RGD PMID:10620399 RGD:724665 NCBI chrNW_004955458:5,457,927...5,460,718
Ensembl chrNW_004955458:5,453,732...5,460,718
JBrowse link
G Cdon cell adhesion associated, oncogene regulated ISO (MGI:4422144|PMID:19754878) MGI PMID:19754878 MGI:4422144 NCBI chrNW_004955412:27,004,391...27,093,968
Ensembl chrNW_004955412:27,003,919...27,065,989
JBrowse link
G Cryaa crystallin alpha A ISO (MGI:2154010|PMID:11687536)
(MGI:3617146|PMID:16439475)
(MGI:3617146|PMID:16439475), (MGI:85598|PMID:9023351)
RGD
MGI
PMID:8187157 PMID:9023351 PMID:11687536 PMID:16439475 MGI:2154010 MGI:3617146 MGI:85598 RGD:1600991 NCBI chrNW_004955407:38,880,088...38,892,946 JBrowse link
G Cryab crystallin alpha B ISO (MGI:3617146|PMID:16439475) MGI PMID:16439475 MGI:3617146 NCBI chrNW_004955412:13,626,018...13,629,495
Ensembl chrNW_004955412:13,625,363...13,640,426
JBrowse link
G Cryba1 crystallin beta A1 ISO RGD PMID:2753045 RGD:1298814 NCBI chrNW_004955481:3,952,976...3,986,548
Ensembl chrNW_004955481:3,952,988...3,959,764
JBrowse link
G Cryba2 crystallin beta A2 ISO (MGI:4950336|PMID:21212184) MGI PMID:21212184 MGI:4950336 NCBI chrNW_004955453:14,438,658...14,444,469
Ensembl chrNW_004955453:14,441,007...14,444,497
JBrowse link
G Crygs crystallin gamma S ISO (MGI:65639|PMID:8034315), (MGI:69851|PMID:6877261) MGI PMID:6877261 PMID:8034315 MGI:65639 MGI:69851 NCBI chrNW_004955420:21,137,964...21,144,206
Ensembl chrNW_004955420:21,137,964...21,144,206
JBrowse link
G Ctns cystinosin, lysosomal cystine transporter ISO (MGI:5302597|PMID:21897743) MGI PMID:21897743 MGI:5302597 NCBI chrNW_004955467:13,151,663...13,169,005
Ensembl chrNW_004955467:13,151,957...13,168,696
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 ISO (MGI:2682188|PMID:14645510) MGI PMID:14645510 MGI:2682188 NCBI chrNW_004955420:13,068,289...13,273,805
Ensembl chrNW_004955420:13,068,289...13,273,805
JBrowse link
G Fat1 FAT atypical cadherin 1 ISO (MGI:5766588|PMID:26114487) MGI PMID:26114487 MGI:5766588 NCBI chrNW_004955403:22,502,625...22,618,513
Ensembl chrNW_004955403:22,502,625...22,619,211
JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 ISO (MGI:5447585|PMID:23136392) MGI PMID:23136392 MGI:5447585 NCBI chrNW_004955405:9,785,857...9,884,220
Ensembl chrNW_004955405:9,843,925...9,884,220
JBrowse link
G Gata3 GATA binding protein 3 ISO (MGI:4354418|PMID:19623612) MGI PMID:19623612 MGI:4354418 NCBI chrNW_004955421:24,448,446...24,477,885
Ensembl chrNW_004955421:24,457,496...24,478,744
JBrowse link
G Gja1 gap junction protein alpha 1 ISO (MGI:1267300|PMID:9620080) MGI PMID:9620080 MGI:1267300 NCBI chrNW_004955436:3,612,533...3,618,095
Ensembl chrNW_004955436:3,612,533...3,618,095
JBrowse link
G Gja8 gap junction protein alpha 8 ISO (MGI:69851|PMID:6877261) MGI PMID:6877261 MGI:69851 NCBI chrNW_004955568:514,905...516,551
Ensembl chrNW_004955568:515,113...516,435
JBrowse link
G Lim2 lens intrinsic membrane protein 2 ISO (MGI:1333159|PMID:6510713), (MGI:69851|PMID:6877261), (MGI:71783|PMID:7088001), (MGI:82332|PMID:8812411) MGI PMID:6510713 PMID:6877261 PMID:7088001 PMID:8812411 MGI:1333159 MGI:69851 MGI:71783 MGI:82332 NCBI chrNW_004955558:1,019,709...1,024,375
Ensembl chrNW_004955558:1,019,244...1,024,375
JBrowse link
G Maf MAF bZIP transcription factor ISO (MGI:1340085|PMID:10383433)
(MGI:3760711|PMID:12835653)
(MGI:1350584|PMID:10603348)
MGI PMID:10383433 PMID:10603348 PMID:12835653 MGI:1340085 MGI:1350584 MGI:3760711 NCBI chrNW_004955522:2,514,313...2,519,694 JBrowse link
G Med1 mediator complex subunit 1 ISO (MGI:2158098|PMID:11724781) BHF-UCL PMID:11724781 MGI:2158098 NCBI chrNW_004955451:14,204,326...14,237,809
Ensembl chrNW_004955451:14,202,744...14,237,797
JBrowse link
G Mip major intrinsic protein of lens fiber ISO (MGI:55175|PMID:7333462) MGI PMID:7333462 MGI:55175 NCBI chrNW_004955458:4,030,619...4,035,656
Ensembl chrNW_004955458:4,030,619...4,035,656
JBrowse link
G Nhs NHS actin remodeling regulator ISO (MGI:64544|PMID:8282045) MGI PMID:8282045 MGI:64544 NCBI chrNW_004955519:596,216...919,352
Ensembl chrNW_004955519:599,682...918,762
JBrowse link
G Pax6 paired box 6 ISO (MGI:69851|PMID:6877261) MGI PMID:6877261 MGI:69851 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Pds5a PDS5 cohesin associated factor A ISO (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chrNW_004955443:7,475,434...7,603,548
Ensembl chrNW_004955443:7,475,385...7,604,714
JBrowse link
G Pds5b PDS5 cohesin associated factor B ISO (MGI:3847057|PMID:19412548) MGI PMID:19412548 MGI:3847057 NCBI chrNW_004955431:13,083,229...13,268,680
Ensembl chrNW_004955431:13,078,726...13,197,482
JBrowse link
G Pitx3 paired like homeodomain 3 ISO (MGI:3831639|PMID:19007884), (MGI:4353482|PMID:19334279) UniProt PMID:19007884 PMID:19334279 MGI:3831639 MGI:4353482 NCBI chrNW_004955485:8,130,244...8,140,292
Ensembl chrNW_004955485:8,130,244...8,140,292
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (PMID:8812486) BHF-UCL PMID:8812486 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:1929788|PMID:11139622) UniProt PMID:11139622 MGI:1929788 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Six5 SIX homeobox 5 ISO (MGI:1855730|PMID:10802668)
(MGI:1855731|PMID:10802667)
MGI PMID:10802667 PMID:10802668 MGI:1855730 MGI:1855731 NCBI chrNW_004955574:221,635...225,474
Ensembl chrNW_004955574:222,292...225,401
JBrowse link
G Slitrk6 SLIT and NTRK like family member 6 ISO (MGI:5513052|PMID:23543054) MGI PMID:23543054 MGI:5513052 NCBI chrNW_004955404:22,738,080...22,744,601
Ensembl chrNW_004955404:22,737,974...22,745,046
JBrowse link
G Tbc1d20 TBC1 domain family member 20 ISO (MGI:5551670|PMID:24239381) MGI PMID:24239381 MGI:5551670 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
G Tbc1d32 TBC1 domain family member 32 ISO (MGI:4439200|PMID:20159594) MGI PMID:20159594 MGI:4439200 NCBI chrNW_004955436:3,385,216...3,542,497
Ensembl chrNW_004955436:3,386,180...3,540,933
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 ISO (MGI:2151112|PMID:11641223) MGI PMID:11641223 MGI:2151112 NCBI chrNW_004955419:26,490,899...26,546,349
Ensembl chrNW_004955419:26,490,899...26,547,017
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO (MGI:2151112|PMID:11641223) MGI PMID:11641223 MGI:2151112 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837
JBrowse link
lens fiber cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bfsp1 beaded filament structural protein 1 ISO (MGI:2673300|PMID:15037121) MGI PMID:15037121 MGI:2673300 NCBI chrNW_004955415:26,507,381...26,535,545
Ensembl chrNW_004955415:26,507,528...26,535,551
JBrowse link
G Bfsp2 beaded filament structural protein 2 ISO (MGI:2673300|PMID:15037121), (MGI:3717045|PMID:17065509) MGI PMID:15037121 PMID:17065509 MGI:2673300 MGI:3717045 NCBI chrNW_004955501:5,083,456...5,145,256
Ensembl chrNW_004955501:5,083,456...5,145,256
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 ISO (MGI:5447585|PMID:23136392)
(MGI:3796810|PMID:18455718)
MGI PMID:18455718 PMID:23136392 MGI:3796810 MGI:5447585 NCBI chrNW_004955551:2,321,190...2,427,000 JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:3796810|PMID:18455718) MGI PMID:18455718 MGI:3796810 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 ISO (MGI:5447585|PMID:23136392) MGI PMID:23136392 MGI:5447585 NCBI chrNW_004955405:9,785,857...9,884,220
Ensembl chrNW_004955405:9,843,925...9,884,220
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO (MGI:4888440|PMID:21118511) MGI PMID:21118511 MGI:4888440 NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
JBrowse link
G Tmod1 tropomodulin 1 ISO (MGI:5475090|PMID:23144950) CACAO PMID:23144950 MGI:5475090 NCBI chrNW_004955419:27,841,424...27,915,540
Ensembl chrNW_004955419:27,841,424...27,915,540
JBrowse link
G Vim vimentin ISO (MGI:2673300|PMID:15037121) MGI PMID:15037121 MGI:2673300 NCBI chrNW_004955429:10,708,852...10,716,743
Ensembl chrNW_004955429:10,707,719...10,717,554
JBrowse link
lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fzr1 fizzy and cell division cycle 20 related 1 ISO (MGI:3720408|PMID:17215516) MGI PMID:17215516 MGI:3720408 NCBI chrNW_004955495:5,481,914...5,503,690
Ensembl chrNW_004955495:5,481,916...5,505,521
JBrowse link
G Kdm5b lysine demethylase 5B ISO RGD PMID:24142921 RGD:9587771 NCBI chrNW_004955406:38,755,220...38,823,094
Ensembl chrNW_004955406:38,755,220...38,823,088
JBrowse link
G Maf MAF bZIP transcription factor ISO (MGI:3760711|PMID:12835653)
(MGI:1340085|PMID:10383433)
MGI PMID:10383433 PMID:12835653 MGI:1340085 MGI:3760711 NCBI chrNW_004955522:2,514,313...2,519,694 JBrowse link
G Nf2 neurofibromin 2 ISO (MGI:4457460|PMID:20181838) UniProt PMID:20181838 MGI:4457460 NCBI chrNW_004955455:3,862,804...3,950,669
Ensembl chrNW_004955455:3,862,347...3,951,891
JBrowse link
G Ntrk3 neurotrophic receptor tyrosine kinase 3 ISO (MGI:5447585|PMID:23136392) MGI PMID:23136392 MGI:5447585 NCBI chrNW_004955416:16,652,931...17,018,188
Ensembl chrNW_004955416:16,652,791...17,018,188
JBrowse link
G Pitx3 paired like homeodomain 3 ISO (MGI:3831639|PMID:19007884) UniProt PMID:19007884 MGI:3831639 NCBI chrNW_004955485:8,130,244...8,140,292
Ensembl chrNW_004955485:8,130,244...8,140,292
JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:2181466|PMID:12072567) UniProt PMID:12072567 MGI:2181466 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Skil SKI like proto-oncogene ISO (MGI:3720408|PMID:17215516) MGI PMID:17215516 MGI:3720408 NCBI chrNW_004955420:530,531...554,308
Ensembl chrNW_004955420:530,528...554,551
JBrowse link
G Slc7a11 solute carrier family 7 member 11 ISO RGD PMID:16043861 RGD:2315033 NCBI chrNW_004955428:5,238,460...5,309,085
Ensembl chrNW_004955428:5,237,865...5,309,085
JBrowse link
G Smad3 SMAD family member 3 ISO (MGI:3720408|PMID:17215516) MGI PMID:17215516 MGI:3720408 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Tdrd7 tudor domain containing 7 involved_in ISO (MGI:4943339|PMID:21436445)
(PMID:21436445)
UniProt PMID:21436445 MGI:4943339 NCBI chrNW_004955419:27,919,664...27,983,426
Ensembl chrNW_004955419:27,916,011...27,976,163
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO (MGI:3720408|PMID:17215516) MGI PMID:17215516 MGI:3720408 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
lens fiber cell morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl interactor 2 ISO (MGI:3525751|PMID:15572692) UniProt PMID:15572692 MGI:3525751 NCBI chrNW_004955457:11,451,851...11,562,692
Ensembl chrNW_004955457:11,451,851...11,562,696
JBrowse link
G Atf4 activating transcription factor 4 ISO (MGI:1339872|PMID:10096021), (MGI:1859108|PMID:10885750), (MGI:2158533|PMID:11806972) UniProt PMID:10096021 PMID:10885750 PMID:11806972 MGI:1339872 MGI:1859108 MGI:2158533 NCBI chrNW_004955413:25,406,589...25,408,727
Ensembl chrNW_004955413:25,406,589...25,412,218
JBrowse link
G Cryaa crystallin alpha A ISO (MGI:3655912|PMID:16799046)
(MGI:3775669|PMID:18056999)
MGI PMID:16799046 PMID:18056999 MGI:3655912 MGI:3775669 NCBI chrNW_004955407:38,880,088...38,892,946 JBrowse link
G Epha2 EPH receptor A2 ISO (MGI:3831440|PMID:18948590) UniProt PMID:18948590 MGI:3831440 NCBI chrNW_004955527:2,120,447...2,151,932
Ensembl chrNW_004955527:2,120,266...2,152,781
JBrowse link
G Prox1 prospero homeobox 1 involved_in ISO (MGI:1332720|PMID:10080188)
(PMID:11850194)
BHF-UCL PMID:10080188 PMID:11850194 MGI:1332720 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Tbc1d20 TBC1 domain family member 20 ISO (MGI:5551670|PMID:24239381) MGI PMID:24239381 MGI:5551670 NCBI chrNW_004955597:291,541...313,799
Ensembl chrNW_004955597:291,541...314,292
JBrowse link
lens induction in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 ISO (MGI:1316914|PMID:9851982) MGI PMID:9851982 MGI:1316914 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Pou2f1 POU class 2 homeobox 1 ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chrNW_004955462:9,545,122...9,710,190
Ensembl chrNW_004955462:9,553,415...9,710,188
JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:3692850|PMID:17066077) MGI PMID:17066077 MGI:3692850 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:3701404|PMID:17140559) MGI PMID:17140559 MGI:3701404 NCBI chrNW_004955420:10,671,888...10,674,080
Ensembl chrNW_004955420:10,671,978...10,672,934
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (MGI:1347707|PMID:10571739) MGI PMID:10571739 MGI:1347707 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
lens morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcar3 BCAR3 adaptor protein, NSP family member ISO (MGI:4358852|PMID:19365570) MGI PMID:19365570 MGI:4358852 NCBI chrNW_004955423:991,046...1,105,033
Ensembl chrNW_004955423:991,057...1,105,033
JBrowse link
G Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 ISO (MGI:3807101|PMID:18653562) MGI PMID:18653562 MGI:3807101 NCBI chrNW_004955436:20,370,950...20,372,677
Ensembl chrNW_004955436:20,370,950...20,372,677
JBrowse link
G Cryaa crystallin alpha A ISO (MGI:3655912|PMID:16799046)
(MGI:82388|PMID:8812430)
MGI PMID:8812430 PMID:16799046 MGI:3655912 MGI:82388 NCBI chrNW_004955407:38,880,088...38,892,946 JBrowse link
G Ctnnb1 catenin beta 1 ISO (MGI:3603687|PMID:16102745) MGI PMID:16102745 MGI:3603687 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 ISO (MGI:1933072|PMID:11290300) MGI PMID:11290300 MGI:1933072 NCBI chrNW_004955514:1,030,244...1,038,590
Ensembl chrNW_004955514:1,025,600...1,038,590
JBrowse link
G Lctl lactase like ISO (MGI:6274960|PMID:29425878) UniProt PMID:29425878 MGI:6274960 NCBI chrNW_004955450:9,127,151...9,139,836
Ensembl chrNW_004955450:9,127,174...9,139,211
JBrowse link
G Meis1 Meis homeobox 1 ISO (MGI:3028436|PMID:14713950) MGI PMID:14713950 MGI:3028436 NCBI chrNW_004955424:18,060,499...18,190,425
Ensembl chrNW_004955424:18,058,004...18,190,453
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO (MGI:3604842|PMID:15728677) MGI PMID:15728677 MGI:3604842 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 ISO (MGI:3604842|PMID:15728677) MGI PMID:15728677 MGI:3604842 NCBI chrNW_004955427:11,639,942...11,731,910
Ensembl chrNW_004955427:11,606,909...11,724,004
JBrowse link
G Pitx3 paired like homeodomain 3 ISO (MGI:4353482|PMID:19334279) UniProt PMID:19334279 MGI:4353482 NCBI chrNW_004955485:8,130,244...8,140,292
Ensembl chrNW_004955485:8,130,244...8,140,292
JBrowse link
G Prox1 prospero homeobox 1 ISO (MGI:1332720|PMID:10080188) BHF-UCL PMID:10080188 MGI:1332720 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
G Ski SKI proto-oncogene ISO (MGI:3693412|PMID:17003410) MGI PMID:17003410 MGI:3693412 NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
JBrowse link
G Sox11 SRY-box transcription factor 11 ISO (MGI:3797299|PMID:18423449) UniProt PMID:18423449 MGI:3797299 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521
JBrowse link
G Tdrd7 tudor domain containing 7 involved_in ISO (MGI:4943339|PMID:21436445)
(PMID:21436445)
UniProt PMID:21436445 MGI:4943339 NCBI chrNW_004955419:27,919,664...27,983,426
Ensembl chrNW_004955419:27,916,011...27,976,163
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (MGI:1329246|PMID:9918694), (MGI:3774683|PMID:18224708) MGI PMID:9918694 PMID:18224708 MGI:1329246 MGI:3774683 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
negative regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chrNW_004955486:2,923,239...2,975,835 JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:5316576|PMID:21875655) UniProt PMID:21875655 MGI:5316576 NCBI chrNW_004955428:2,325,775...2,329,122
Ensembl chrNW_004955428:2,324,834...2,329,205
JBrowse link
negative regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spred1 sprouty related EVH1 domain containing 1 ISO (MGI:6414698|PMID:29501879) UniProt PMID:29501879 MGI:6414698 NCBI chrNW_004955416:5,288,779...5,376,861
Ensembl chrNW_004955416:5,288,262...5,377,036
JBrowse link
G Spred2 sprouty related EVH1 domain containing 2 ISO (MGI:6414698|PMID:29501879) UniProt PMID:29501879 MGI:6414698 NCBI chrNW_004955424:19,133,568...19,250,118
Ensembl chrNW_004955424:19,133,568...19,250,118
JBrowse link
G Spred3 sprouty related EVH1 domain containing 3 ISO (MGI:6414698|PMID:29501879) UniProt PMID:29501879 MGI:6414698 NCBI chrNW_004955468:1,030,964...1,039,495
Ensembl chrNW_004955468:1,028,470...1,039,495
JBrowse link
G Spry1 sprouty RTK signaling antagonist 1 ISO (MGI:6414698|PMID:29501879) UniProt PMID:29501879 MGI:6414698 NCBI chrNW_004955428:17,451,703...17,455,695
Ensembl chrNW_004955428:17,451,703...17,455,695
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 ISO (MGI:6414698|PMID:29501879) UniProt PMID:29501879 MGI:6414698 NCBI chrNW_004955404:27,349,286...27,353,706
Ensembl chrNW_004955404:27,349,519...27,353,706
JBrowse link
negative regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2 BCL2 apoptosis regulator ISO (MGI:1336407|PMID:10321489) MGI PMID:10321489 MGI:1336407 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485
JBrowse link
G Bhlhe23 basic helix-loop-helix family member e23 ISO (MGI:3054140|PMID:15363390) MGI PMID:15363390 MGI:3054140 NCBI chrNW_004955528:1,094,234...1,094,674 JBrowse link
negative regulation of retinal cone cell fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casz1 castor zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chrNW_004955486:2,923,239...2,975,835 JBrowse link
negative regulation of vasculature development involved in avascular cornea development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angptl7 angiopoietin like 7 involved_in ISO (PMID:25622036) UniProt PMID:25622036 NCBI chrNW_004955486:2,539,781...2,545,630
Ensembl chrNW_004955486:2,539,781...2,545,630
JBrowse link
neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actl6a actin like 6A involved_in ISO (PMID:18816825) BHF-UCL PMID:18816825 NCBI chrNW_004955420:8,745,390...8,764,993
Ensembl chrNW_004955420:8,744,597...8,764,993
JBrowse link
G Atoh7 atonal bHLH transcription factor 7 involved_in ISO (MGI:5288596|PMID:21441919)
(PMID:21441919)
MGI PMID:21441919 MGI:5288596 NCBI chrNW_004955425:20,559,466...20,560,275 JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:16079002 RGD:2317729 NCBI chrNW_004955405:26,872,379...26,932,270
Ensembl chrNW_004955405:26,872,379...26,932,703
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO RGD PMID:16079002 RGD:2317729 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Atp2b3 ATPase plasma membrane Ca2+ transporting 3 ISO RGD PMID:16079002 RGD:2317729 NCBI chrNW_004955580:286,092...332,657
Ensembl chrNW_004955580:269,100...333,471
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO RGD PMID:16079002 RGD:2317729 NCBI chrNW_004955406:39,552,034...39,645,694
Ensembl chrNW_004955406:39,552,019...39,645,694
JBrowse link
G Bsg basigin (Ok blood group) ISO (MGI:1888850|PMID:10967074), (MGI:1932603|PMID:11273674), (MGI:3610672|PMID:11853760) UniProt PMID:10967074 PMID:11273674 PMID:11853760 MGI:1888850 MGI:1932603 MGI:3610672 NCBI chrNW_004955495:7,148,806...7,156,296 JBrowse link
G Casp2 caspase 2 ISO RGD PMID:9809666 RGD:4107085 NCBI chrNW_004955494:353,572...369,207
Ensembl chrNW_004955494:353,310...368,873
JBrowse link
G Gpm6a glycoprotein M6A ISO (MGI:3811956|PMID:18776950) UniProt PMID:18776950 MGI:3811956 NCBI chrNW_004955403:31,704,540...31,997,382
Ensembl chrNW_004955403:31,861,945...31,997,382
JBrowse link
G Optn optineurin ISO RGD PMID:17687037 RGD:7800681 NCBI chrNW_004955462:1,098,118...1,150,291
Ensembl chrNW_004955462:1,107,510...1,151,269
JBrowse link
G Psen1 presenilin 1 ISO RGD PMID:12401445 RGD:729595 NCBI chrNW_004955523:2,128,529...2,210,737
Ensembl chrNW_004955523:2,128,529...2,210,737
JBrowse link
G Rab11fip4 RAB11 family interacting protein 4 ISO (MGI:3694624|PMID:17089410) MGI PMID:17089410 MGI:3694624 NCBI chrNW_004955481:6,501,704...6,554,448
Ensembl chrNW_004955481:6,469,286...6,548,919
JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO RGD PMID:2631392 RGD:9585660 NCBI chrNW_004955423:23,184,326...23,208,206
Ensembl chrNW_004955423:23,183,937...23,208,282
JBrowse link
G Slc17a6 solute carrier family 17 member 6 ISO RGD PMID:18482716 RGD:9999162 NCBI chrNW_004955476:2,813,368...2,854,371
Ensembl chrNW_004955476:2,813,368...2,854,514
JBrowse link
G Slc17a7 solute carrier family 17 member 7 ISO RGD PMID:18482716 RGD:9999162 NCBI chrNW_004955559:1,399,182...1,409,074
Ensembl chrNW_004955559:1,399,182...1,409,134
JBrowse link
G Slc17a8 solute carrier family 17 member 8 ISO RGD PMID:18482716 RGD:9999162 NCBI chrNW_004955405:36,063,688...36,115,312
Ensembl chrNW_004955405:36,063,688...36,115,312
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO (PMID:18816825) BHF-UCL PMID:18816825 NCBI chrNW_004955495:2,021,671...2,105,155
Ensembl chrNW_004955495:2,021,566...2,105,397
JBrowse link
G Smarcd3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 involved_in ISO (PMID:18816825) BHF-UCL PMID:18816825 NCBI chrNW_004955491:5,653,284...5,657,546
Ensembl chrNW_004955491:5,651,597...5,657,554
JBrowse link
G Tgfb2 transforming growth factor beta 2 ISO (MGI:894212|PMID:9217007) BHF-UCL PMID:9217007 MGI:894212 NCBI chrNW_004955406:174,949...249,248
Ensembl chrNW_004955406:172,814...249,248
JBrowse link
optic cup formation involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid1a AT-rich interaction domain 1A ISO (MGI:5466629|PMID:23129809) MGI PMID:23129809 MGI:5466629 NCBI chrNW_004955452:6,068,631...6,120,759
Ensembl chrNW_004955452:6,068,631...6,120,759
JBrowse link
optic cup morphogenesis involved in camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a3 aldehyde dehydrogenase 1 family member A3 ISO (MGI:3624188|PMID:16611695) MGI PMID:16611695 MGI:3624188 NCBI chrNW_004955416:27,823,611...27,858,112
Ensembl chrNW_004955416:27,823,611...27,858,173
JBrowse link
G Pax2 paired box 2 ISO (MGI:84247|PMID:8951055) DFLAT PMID:8951055 MGI:84247 NCBI chrNW_004955485:9,351,913...9,430,607
Ensembl chrNW_004955485:9,350,087...9,430,607
JBrowse link
optic cup structural organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tfap2a transcription factor AP-2 alpha ISO (MGI:4439459|PMID:20150232) UniProt PMID:20150232 MGI:4439459 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
optic placode formation involved in camera-type eye formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Frs2 fibroblast growth factor receptor substrate 2 ISO (MGI:3513737|PMID:15569927) MGI PMID:15569927 MGI:3513737 NCBI chrNW_004955405:9,785,857...9,884,220
Ensembl chrNW_004955405:9,843,925...9,884,220
JBrowse link
G Prox1 prospero homeobox 1 ISO (PMID:11850194) BHF-UCL PMID:11850194 NCBI chrNW_004955406:3,715,140...3,770,019
Ensembl chrNW_004955406:3,719,972...3,770,555
JBrowse link
optic vesicle morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Six3 SIX homeobox 3 ISO (MGI:2136715|PMID:11458394) UniProt PMID:11458394 MGI:2136715 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
G Tfap2a transcription factor AP-2 alpha ISO (MGI:4439459|PMID:20150232) UniProt PMID:20150232 MGI:4439459 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
positive regulation of amacrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx1 distal-less homeobox 1 ISO (MGI:5316576|PMID:21875655) UniProt PMID:21875655 MGI:5316576 NCBI chrNW_004955449:2,920,705...2,924,667
Ensembl chrNW_004955449:2,920,478...2,924,667
JBrowse link
G Dlx2 distal-less homeobox 2 ISO (MGI:5316576|PMID:21875655) UniProt PMID:21875655 MGI:5316576 NCBI chrNW_004955449:2,907,502...2,909,893
Ensembl chrNW_004955449:2,907,436...2,910,816
JBrowse link
positive regulation of lens epithelial cell proliferation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sox11 SRY-box transcription factor 11 ISO (MGI:3797299|PMID:18423449) UniProt PMID:18423449 MGI:3797299 NCBI chrNW_004955487:2,678,961...2,680,869
Ensembl chrNW_004955487:2,679,145...2,680,521
JBrowse link
positive regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf2 fibroblast growth factor 2 involved_in ISO (PMID:29501879) UniProt PMID:29501879 NCBI chrNW_004955428:17,840,554...17,894,779 JBrowse link
G Zeb2 zinc finger E-box binding homeobox 2 ISO (MGI:3604916|PMID:16162653) UniProt PMID:16162653 MGI:3604916 NCBI chrNW_004955440:10,755,658...10,881,044
Ensembl chrNW_004955440:10,756,014...10,795,491
JBrowse link
positive regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp6 caspase 6 ISO RGD PMID:12917395 RGD:2301324 NCBI chrNW_004955496:575,839...584,287
Ensembl chrNW_004955496:577,832...584,287
JBrowse link
post-embryonic camera-type eye development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b BAF chromatin remodeling complex subunit BCL11B ISO (MGI:2662810|PMID:12717433) MGI PMID:12717433 MGI:2662810 NCBI chrNW_004955438:20,562,345...20,637,662
Ensembl chrNW_004955438:20,564,449...20,637,103
JBrowse link
G Fzd5 frizzled class receptor 5 ISO (MGI:3826935|PMID:18832390)
(MGI:3821812|PMID:18791178)
CACAO
MGI
PMID:18791178 PMID:18832390 MGI:3821812 MGI:3826935 NCBI chrNW_004955457:7,282,403...7,288,918
Ensembl chrNW_004955457:7,282,403...7,288,918
JBrowse link
G Klf4 Kruppel like factor 4 ISO (MGI:3697243|PMID:17060454) MGI PMID:17060454 MGI:3697243 NCBI chrNW_004955419:19,280,311...19,284,097
Ensembl chrNW_004955419:19,280,235...19,285,174
JBrowse link
G Muc4 mucin 4, cell surface associated ISO RGD PMID:11120573 RGD:2303744 NCBI chrNW_004955420:12,228,801...12,274,840 JBrowse link
G Vegfa vascular endothelial growth factor A ISO (MGI:1339868|PMID:10229225) MGI PMID:10229225 MGI:1339868 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
post-embryonic camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bak1 BCL2 antagonist/killer 1 ISO (MGI:3692135|PMID:15955981) MGI PMID:15955981 MGI:3692135 NCBI chrNW_004955437:2,036,415...2,041,997
Ensembl chrNW_004955437:2,036,415...2,041,997
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:3692135|PMID:15955981) MGI PMID:15955981 MGI:3692135 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Flt1 fms related receptor tyrosine kinase 1 ISO (MGI:5318610|PMID:22426483) MGI PMID:22426483 MGI:5318610 NCBI chrNW_004955497:7,653,309...7,831,737
Ensembl chrNW_004955497:7,653,248...7,831,472
JBrowse link
G Hmgn1 high mobility group nucleosome binding domain 1 ISO (MGI:3614611|PMID:16466397) MGI PMID:16466397 MGI:3614611 NCBI chrNW_004955407:38,136,386...38,142,587
Ensembl chrNW_004955407:38,136,386...38,143,479
JBrowse link
G Kdr kinase insert domain receptor ISO (MGI:5318610|PMID:22426483) MGI PMID:22426483 MGI:5318610 NCBI chrNW_004955447:15,810,816...15,851,702
Ensembl chrNW_004955447:15,810,815...15,853,583
JBrowse link
post-embryonic eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe23 basic helix-loop-helix family member e23 ISO (MGI:3054140|PMID:15363390) MGI PMID:15363390 MGI:3054140 NCBI chrNW_004955528:1,094,234...1,094,674 JBrowse link
G Efemp1 EGF containing fibulin extracellular matrix protein 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955424:27,181,717...27,240,067
Ensembl chrNW_004955424:27,181,099...27,240,446
JBrowse link
G Fbn1 fibrillin 1 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955409:5,281,603...5,502,547
Ensembl chrNW_004955409:5,281,603...5,504,761
JBrowse link
G Mfap2 microfibril associated protein 2 involved_in ISO (PMID:25406291) UniProt PMID:25406291 NCBI chrNW_004955527:1,826,528...1,832,058
Ensembl chrNW_004955527:1,826,528...1,832,052
JBrowse link
post-embryonic retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc66 coiled-coil domain containing 66 ISO (MGI:5141557|PMID:21680557) MGI PMID:21680557 MGI:5141557 NCBI chrNW_004955430:6,402,622...6,440,154
Ensembl chrNW_004955430:6,402,701...6,439,985
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:2675211|PMID:12915475), (MGI:3051713|PMID:15316081), (MGI:3690408|PMID:16885194) MGI PMID:12915475 PMID:15316081 PMID:16885194 MGI:2675211 MGI:3051713 MGI:3690408 NCBI chrNW_004955406:33,817,754...34,005,937
Ensembl chrNW_004955406:33,817,605...34,005,943
JBrowse link
G Dscam DS cell adhesion molecule ISO (MGI:3768917|PMID:18216855) MGI PMID:18216855 MGI:3768917 NCBI chrNW_004955407:39,985,501...40,473,330
Ensembl chrNW_004955407:39,986,108...40,473,200
JBrowse link
G Grk1 G protein-coupled receptor kinase 1 ISO (MGI:1334014|PMID:10097103) MGI PMID:10097103 MGI:1334014 NCBI chrNW_004955404:343,009...353,683
Ensembl chrNW_004955404:343,009...353,683
JBrowse link
regulation of lens fiber cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn1b cyclin dependent kinase inhibitor 1B ISO (MGI:1309707|PMID:9784491) MGI PMID:9784491 MGI:1309707 NCBI chrNW_004955413:9,615,542...9,620,542
Ensembl chrNW_004955413:9,615,542...9,620,542
JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C ISO (MGI:1309707|PMID:9784491) MGI PMID:9784491 MGI:1309707 NCBI chrNW_004955422:14,576,971...14,578,868 JBrowse link
regulation of neural retina development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll4 delta like canonical Notch ligand 4 ISO (MGI:5314555|PMID:22323600) UniProt PMID:22323600 MGI:5314555 NCBI chrNW_004955416:7,807,049...7,816,346
Ensembl chrNW_004955416:7,807,049...7,817,420
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO (MGI:3691257|PMID:17075007) UniProt PMID:17075007 MGI:3691257 NCBI chrNW_004955429:5,807,804...5,809,522
Ensembl chrNW_004955429:5,808,124...5,809,522
JBrowse link
G Six3 SIX homeobox 3 ISO (MGI:4837018|PMID:20890044) UniProt PMID:20890044 MGI:4837018 NCBI chrNW_004955441:11,966,389...11,978,545
Ensembl chrNW_004955441:11,966,389...11,979,466
JBrowse link
regulation of retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf4 CUGBP Elav-like family member 4 ISO (MGI:5523751|PMID:23932931) MGI PMID:23932931 MGI:5523751 NCBI chrNW_004955402:23,607,160...23,898,495
Ensembl chrNW_004955402:23,617,421...23,898,347
JBrowse link
regulation of retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chrNW_004955476:6,773,244...6,822,201
Ensembl chrNW_004955476:6,772,088...6,822,588
JBrowse link
G Cntf ciliary neurotrophic factor ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chrNW_004955511:3,527,552...3,531,275
Ensembl chrNW_004955511:3,527,552...3,534,348
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO (MGI:2155023|PMID:11747369) MGI PMID:11747369 MGI:2155023 NCBI chrNW_004955428:17,840,554...17,894,779 JBrowse link
retina development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase (Cartwright blood group) ISO (MGI:3603700|PMID:15579149) MGI PMID:15579149 MGI:3603700 NCBI chrNW_004955573:79,606...85,799
Ensembl chrNW_004955573:80,298...85,799
JBrowse link
G Actb actin beta ISO RGD PMID:22916200 RGD:9587758 NCBI chrNW_004955460:10,358,100...10,361,585
Ensembl chrNW_004955460:10,356,699...10,361,585
JBrowse link
G Ahi1 Abelson helper integration site 1 ISO (MGI:4461813|PMID:20592197) MGI PMID:20592197 MGI:4461813 NCBI chrNW_004955439:1,277,185...1,460,296
Ensembl chrNW_004955439:1,276,760...1,474,202
JBrowse link
G Apc APC regulator of WNT signaling pathway ISO (MGI:3699582|PMID:10982921) MGI PMID:10982921 MGI:3699582 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:1277631|PMID:9699561) MGI PMID:9699561 MGI:1277631 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO RGD PMID:17069773 RGD:2289001 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO (MGI:2654391|PMID:12654290) MGI PMID:12654290 MGI:2654391 NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO RGD PMID:10482474 RGD:5129487 NCBI chrNW_004955457:12,235,780...12,315,680
Ensembl chrNW_004955457:12,235,780...12,316,727
JBrowse link
G C3 complement C3 ISO (MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chrNW_004955495:2,796,601...2,824,233
Ensembl chrNW_004955495:2,796,663...2,824,697
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955543:692,035...717,364
Ensembl chrNW_004955543:692,035...717,364
JBrowse link
G Calb1 calbindin 1 ISO (PMID:10741426) UniProtKB PMID:10741426 NCBI chrNW_004955417:6,944,300...6,969,341
Ensembl chrNW_004955417:6,942,900...6,969,502
JBrowse link
G Cep290 centrosomal protein 290 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955405:25,533,037...25,607,021
Ensembl chrNW_004955405:25,533,525...25,606,212
JBrowse link
G Cfd complement factor D ISO (MGI:5883383|PMID:28057640) MGI PMID:28057640 MGI:5883383 NCBI chrNW_004955495:6,955,612...6,961,317 JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 involved_in ISO (PMID:15300250) BHF-UCL PMID:15300250 NCBI chrNW_004955444:17,859,999...18,067,623
Ensembl chrNW_004955444:17,858,771...18,067,248
JBrowse link
G Clcn2 chloride voltage-gated channel 2 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955420:23,138,558...23,152,462
Ensembl chrNW_004955420:23,138,605...23,152,311
JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein ISO (MGI:4849309|PMID:21052544)
(MGI:3695117|PMID:15565184)
MGI PMID:15565184 PMID:21052544 MGI:3695117 MGI:4849309 NCBI chrNW_004955403:57,926,711...57,938,698
Ensembl chrNW_004955403:57,924,873...57,938,690
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:5315300|PMID:22447858), (MGI:5608935|PMID:25147295) MGI PMID:22447858 PMID:25147295 MGI:5315300 MGI:5608935 NCBI chrNW_004955406:33,817,754...34,005,937
Ensembl chrNW_004955406:33,817,605...34,005,943
JBrowse link
G Crx cone-rod homeobox ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955574:1,544,917...1,548,912
Ensembl chrNW_004955574:1,544,917...1,548,912
JBrowse link
G Dll1 delta like canonical Notch ligand 1 ISO (MGI:3848562|PMID:19389377) UniProt PMID:19389377 MGI:3848562 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Drd4 dopamine receptor D4 ISO RGD PMID:18778704 RGD:7175073 NCBI chrNW_004955476:11,424,347...11,426,962
Ensembl chrNW_004955476:11,424,411...11,426,960
JBrowse link
G Dtnbp1 dystrobrevin binding protein 1 ISO RGD PMID:23954924 RGD:11251759 NCBI chrNW_004955590:276,143...382,812
Ensembl chrNW_004955590:281,704...386,189
JBrowse link
G Gdnf glial cell derived neurotrophic factor ISO RGD PMID:16650834 RGD:2324945 NCBI chrNW_004955426:22,386,613...22,412,324
Ensembl chrNW_004955426:22,386,450...22,412,324
JBrowse link
G Gnat1 G protein subunit alpha transducin 1 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955532:2,018,850...2,023,603
Ensembl chrNW_004955532:2,018,850...2,023,603
JBrowse link
G Gnb1 G protein subunit beta 1 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955486:9,165,850...9,192,306
Ensembl chrNW_004955486:9,165,850...9,193,066
JBrowse link
G Grm6 glutamate metabotropic receptor 6 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955408:1,421,132...1,432,010
Ensembl chrNW_004955408:1,421,132...1,433,622
JBrowse link
G Grn granulin precursor ISO (MGI:6101836|PMID:28728022) MGI PMID:28728022 MGI:6101836 NCBI chrNW_004955451:17,368,600...17,371,981
Ensembl chrNW_004955451:17,368,428...17,372,377
JBrowse link
G Hpca hippocalcin ISO RGD PMID:7789406 RGD:9686441 NCBI chrNW_004955452:11,142,282...11,150,798
Ensembl chrNW_004955452:11,140,373...11,154,261
JBrowse link
G Hps1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955507:4,408,428...4,433,219
Ensembl chrNW_004955507:4,409,035...4,429,348
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:3831471|PMID:18940586) MGI PMID:18940586 MGI:3831471 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791
JBrowse link
G Il4 interleukin 4 ISO RGD PMID:23070471 RGD:7829830 NCBI chrNW_004955408:4,058,052...4,065,999 JBrowse link
G Impdh1 inosine monophosphate dehydrogenase 1 ISO RGD PMID:18295529 RGD:5144133 NCBI chrNW_004955479:9,388,241...9,406,717
Ensembl chrNW_004955479:9,388,108...9,406,764
JBrowse link
G Impdh2 inosine monophosphate dehydrogenase 2 ISO RGD PMID:18295529 RGD:5144133 NCBI chrNW_004955532:1,047,138...1,051,980
Ensembl chrNW_004955532:1,045,833...1,051,978
JBrowse link
G Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ISO (MGI:3580691|PMID:15345036) MGI PMID:15345036 MGI:3580691 NCBI chrNW_004955506:5,577,735...5,588,307
Ensembl chrNW_004955506:5,577,437...5,588,372
JBrowse link
G Lama1 laminin subunit alpha 1 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955402:4,281,415...4,397,158
Ensembl chrNW_004955402:4,285,492...4,400,348
JBrowse link
G Lamb2 laminin subunit beta 2 ISO (MGI:4454394|PMID:19907020) MGI PMID:19907020 MGI:4454394 NCBI chrNW_004955532:1,115,412...1,127,264
Ensembl chrNW_004955532:1,115,087...1,127,455
JBrowse link
G Lamc3 laminin subunit gamma 3 ISO (MGI:4454394|PMID:19907020) MGI PMID:19907020 MGI:4454394 NCBI chrNW_004955513:872,301...934,234
Ensembl chrNW_004955513:881,092...934,458
JBrowse link
G Lhx1 LIM homeobox 1 ISO (PMID:10741426) UniProtKB PMID:10741426 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Lhx2 LIM homeobox 2 ISO (MGI:3836385|PMID:19146846) MGI PMID:19146846 MGI:3836385 NCBI chrNW_004955419:3,999,364...4,019,543
Ensembl chrNW_004955419:3,998,242...4,018,875
JBrowse link
G Lif LIF interleukin 6 family cytokine ISO RGD PMID:16643897 RGD:2326157 NCBI chrNW_004955455:4,489,515...4,505,439
Ensembl chrNW_004955455:4,489,421...4,497,940
JBrowse link
G Lpcat1 lysophosphatidylcholine acyltransferase 1 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955504:760,941...791,996
Ensembl chrNW_004955504:758,881...791,996
JBrowse link
G Max MYC associated factor X ISO RGD PMID:14603520 RGD:2316820 NCBI chrNW_004955466:4,816,568...4,842,659
Ensembl chrNW_004955466:4,816,568...4,842,659
JBrowse link
G Mdm1 Mdm1 nuclear protein ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955458:14,789,842...14,823,117
Ensembl chrNW_004955458:14,780,437...14,822,954
JBrowse link
G Mertk MER proto-oncogene, tyrosine kinase ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955470:2,065,468...2,167,909
Ensembl chrNW_004955470:2,065,411...2,167,909
JBrowse link
G Mfrp membrane frizzled-related protein ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955412:20,421,935...20,426,760
Ensembl chrNW_004955412:20,421,935...20,426,760
JBrowse link
G Musk muscle associated receptor tyrosine kinase ISO RGD PMID:16899069 RGD:2317091 NCBI chrNW_004955419:16,387,770...16,484,266
Ensembl chrNW_004955419:16,387,770...16,484,266
JBrowse link
G Myh10 myosin heavy chain 10 ISO (MGI:1099556|PMID:9356462), (MGI:1933038|PMID:11283949) MGI PMID:9356462 PMID:11283949 MGI:1099556 MGI:1933038 NCBI chrNW_004955467:8,298,514...8,427,459
Ensembl chrNW_004955467:8,298,527...8,427,459
JBrowse link
G Nectin1 nectin cell adhesion molecule 1 ISO (MGI:3604842|PMID:15728677) MGI PMID:15728677 MGI:3604842 NCBI chrNW_004955412:20,683,007...20,745,069
Ensembl chrNW_004955412:20,682,861...20,745,069
JBrowse link
G Neurod4 neuronal differentiation 4 ISO RGD PMID:15345241 RGD:2311603 NCBI chrNW_004955458:2,138,849...2,146,636
Ensembl chrNW_004955458:2,138,849...2,146,636
JBrowse link
G Nos3 nitric oxide synthase 3 ISO RGD PMID:16639026 RGD:7771562 NCBI chrNW_004955491:5,438,228...5,457,308
Ensembl chrNW_004955491:5,438,010...5,460,814
JBrowse link
G Nphp1 nephrocystin 1 ISO (MGI:3839506|PMID:19208653) UniProt PMID:19208653 MGI:3839506 NCBI chrNW_004955470:3,261,455...3,305,989
Ensembl chrNW_004955470:3,260,557...3,307,797
JBrowse link
G Nphp4 nephrocystin 4 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955486:6,442,058...6,547,451
Ensembl chrNW_004955486:6,448,442...6,547,488
JBrowse link
G Nr2e1 nuclear receptor subfamily 2 group E member 1 ISO (MGI:2151063|PMID:11997145)
(MGI:3624573|PMID:16702404)
MGI PMID:11997145 PMID:16702404 MGI:2151063 MGI:3624573 NCBI chrNW_004955411:33,303,765...33,325,221
Ensembl chrNW_004955411:33,303,655...33,325,376
JBrowse link
G Nr2e3 nuclear receptor subfamily 2 group E member 3 ISO (MGI:4849309|PMID:21052544)
(MGI:3624051|PMID:12407160)
MGI PMID:12407160 PMID:21052544 MGI:3624051 MGI:4849309 NCBI chrNW_004955450:5,281,707...5,286,260
Ensembl chrNW_004955450:5,281,707...5,286,260
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO (MGI:5619875|PMID:25542970) MGI PMID:25542970 MGI:5619875 NCBI chrNW_004955432:2,284,283...2,629,631
Ensembl chrNW_004955432:2,288,898...2,630,878
JBrowse link
G Opa1 OPA1 mitochondrial dynamin like GTPase ISO RGD PMID:15505078 RGD:1547836 NCBI chrNW_004955420:14,927,490...15,007,082
Ensembl chrNW_004955420:14,923,575...15,007,081
JBrowse link
G Pax4 paired box 4 ISO RGD PMID:19012751 RGD:2311636 NCBI chrNW_004955479:8,660,089...8,664,463
Ensembl chrNW_004955479:8,660,089...8,664,463
JBrowse link
G Pax6 paired box 6 ISO (MGI:3836385|PMID:19146846) RGD
MGI
PMID:19012751 PMID:19146846 MGI:3836385 RGD:2311636 NCBI chrNW_004955476:10,058,979...10,074,668
Ensembl chrNW_004955476:10,058,961...10,074,162
JBrowse link
G Pde6a phosphodiesterase 6A ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955415:4,556,636...4,637,070
Ensembl chrNW_004955415:4,566,271...4,637,070
JBrowse link
G Pde6b phosphodiesterase 6B ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955514:234,972...279,420
Ensembl chrNW_004955514:234,972...279,420
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO (MGI:5607451|PMID:25224828) MGI PMID:25224828 MGI:5607451 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
G Pfdn5 prefoldin subunit 5 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955458:555,971...559,927
Ensembl chrNW_004955458:555,971...559,927
JBrowse link
G Pou4f2 POU class 4 homeobox 2 ISO (MGI:80981|PMID:8637595)
(MGI:3621691|PMID:9630743)
MGI PMID:8637595 PMID:9630743 MGI:3621691 MGI:80981 NCBI chrNW_004955428:2,325,775...2,329,122
Ensembl chrNW_004955428:2,324,834...2,329,205
JBrowse link
G Prph2 peripherin 2 ISO (MGI:5905515|PMID:28053051)
(MGI:4849309|PMID:21052544)
(MGI:3610839|PMID:15964665), (MGI:5905515|PMID:28053051)
MGI PMID:15964665 PMID:21052544 PMID:28053051 MGI:3610839 MGI:4849309 MGI:5905515 NCBI chrNW_004955437:8,784,211...8,794,789
Ensembl chrNW_004955437:8,782,183...8,795,017
JBrowse link
G Ptn pleiotrophin ISO RGD PMID:8453763 PMID:16914133 RGD:9831439 RGD:9831456 NCBI chrNW_004955494:5,580,264...5,681,848
Ensembl chrNW_004955494:5,580,422...5,684,190
JBrowse link
G Rarb retinoic acid receptor beta ISO (MGI:81656|PMID:8681798) MGI PMID:8681798 MGI:81656 NCBI chrNW_004955430:17,067,536...17,457,558
Ensembl chrNW_004955430:17,295,174...17,460,045
JBrowse link
G Rarg retinoic acid receptor gamma ISO (MGI:81656|PMID:8681798) MGI PMID:8681798 MGI:81656 NCBI chrNW_004955458:480,257...501,172
Ensembl chrNW_004955458:480,070...501,356
JBrowse link
G Rbp4 retinol binding protein 4 ISO (MGI:2150869|PMID:11562477) MGI PMID:11562477 MGI:2150869 NCBI chrNW_004955507:112,342...120,050
Ensembl chrNW_004955507:108,669...120,584
JBrowse link
G Rd3 RD3 regulator of GUCY2D ISO (MGI:4849309|PMID:21052544), (MGI:52860|PMID:8486383) UniProt PMID:8486383 PMID:21052544 MGI:4849309 MGI:52860 NCBI chrNW_004955489:896,964...903,855 JBrowse link
G Ret ret proto-oncogene ISO RGD PMID:16650834 RGD:2324945 NCBI chrNW_004955546:1,221,995...1,252,147
Ensembl chrNW_004955546:1,221,995...1,253,946
JBrowse link
G Rho rhodopsin ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link
G Rnpep arginyl aminopeptidase ISO RGD PMID:15500823 RGD:2325937 NCBI chrNW_004955406:38,103,701...38,122,162
Ensembl chrNW_004955406:38,103,426...38,122,358
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:5905515|PMID:28053051) MGI PMID:28053051 MGI:5905515 NCBI chrNW_004955599:578,165...580,055
Ensembl chrNW_004955599:573,426...579,812
JBrowse link
G Rorb RAR related orphan receptor B ISO (MGI:5546314|PMID:23652001) UniProt PMID:23652001 MGI:5546314 NCBI chrNW_004955512:4,362,287...4,541,432
Ensembl chrNW_004955512:4,362,287...4,541,445
JBrowse link
G Rp1 RP1 axonemal microtubule associated ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955454:13,781,556...14,082,310 JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955423:23,184,326...23,208,206
Ensembl chrNW_004955423:23,183,937...23,208,282
JBrowse link
G Rpgrip1 RPGR interacting protein 1 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955550:2,015,319...2,073,627
Ensembl chrNW_004955550:2,021,838...2,073,498
JBrowse link
G Rpl24 ribosomal protein L24 ISO (MGI:1097191|PMID:9331275), (MGI:1332363|PMID:10049578) MGI PMID:9331275 PMID:10049578 MGI:1097191 MGI:1332363 NCBI chrNW_004955427:3,201,173...3,204,516
Ensembl chrNW_004955427:3,201,173...3,204,516
JBrowse link
G Rrm1 ribonucleotide reductase catalytic subunit M1 ISO RGD PMID:2647502 RGD:5133699 NCBI chrNW_004955414:19,850,523...19,904,879
Ensembl chrNW_004955414:19,850,530...19,905,266
JBrowse link
G Serpinf1 serpin family F member 1 ISO RGD PMID:21738387 RGD:8655555 NCBI chrNW_004955481:1,414,930...1,426,436
Ensembl chrNW_004955481:1,414,930...1,426,241
JBrowse link
G Ski SKI proto-oncogene ISO (MGI:3693412|PMID:17003410) MGI PMID:17003410 MGI:3693412 NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
JBrowse link
G Slc1a1 solute carrier family 1 member 1 ISO (MGI:6492417|PMID:28703795) MGI PMID:28703795 MGI:6492417 NCBI chrNW_004955434:8,790,685...8,879,757
Ensembl chrNW_004955434:8,790,685...8,879,757
JBrowse link
G Slc4a5 solute carrier family 4 member 5 ISO (MGI:5292606|PMID:21705333) MGI PMID:21705333 MGI:5292606 NCBI chrNW_004955424:11,426,020...11,537,141
Ensembl chrNW_004955424:11,449,819...11,535,379
JBrowse link
G Sox8 SRY-box transcription factor 8 ISO (MGI:4368088|PMID:19490914) MGI PMID:19490914 MGI:4368088 NCBI chrNW_004955442:16,236,286...16,241,093
Ensembl chrNW_004955442:16,236,232...16,241,152
JBrowse link
G Sox9 SRY-box transcription factor 9 ISO (MGI:4368088|PMID:19490914) MGI PMID:19490914 MGI:4368088 NCBI chrNW_004955478:941,684...945,563
Ensembl chrNW_004955478:940,177...945,563
JBrowse link
G Tbc1d32 TBC1 domain family member 32 ISO (MGI:4439200|PMID:20159594) MGI PMID:20159594 MGI:4439200 NCBI chrNW_004955436:3,385,216...3,542,497
Ensembl chrNW_004955436:3,386,180...3,540,933
JBrowse link
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ISO (MGI:4819740|PMID:20711468) MGI PMID:20711468 MGI:4819740 NCBI chrNW_004955422:17,768,469...17,778,976
Ensembl chrNW_004955422:17,768,469...17,779,003
JBrowse link
G Tent2 terminal nucleotidyltransferase 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chrNW_004955425:21,518,154...21,576,068
Ensembl chrNW_004955425:21,517,755...21,576,068
JBrowse link
G Tgif1 TGFB induced factor homeobox 1 ISO (MGI:3826282|PMID:18973577) MGI PMID:18973577 MGI:3826282 NCBI chrNW_004955402:7,130,809...7,138,945
Ensembl chrNW_004955402:7,129,484...7,138,340
JBrowse link
G Tgif2 TGFB induced factor homeobox 2 ISO (MGI:3826300|PMID:18926818) MGI PMID:18926818 MGI:3826300 NCBI chrNW_004955422:25,024,359...25,042,568
Ensembl chrNW_004955422:25,024,359...25,041,459
JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 involved_in ISO (PMID:24791901) MGI PMID:24791901 NCBI chrNW_004955612:109,742...351,255
Ensembl chrNW_004955612:109,743...353,918
JBrowse link
G Tub TUB bipartite transcription factor ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955414:23,832,741...23,919,697
Ensembl chrNW_004955414:23,898,345...23,917,952
JBrowse link
G Tulp1 TUB like protein 1 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955437:3,405,218...3,417,079 JBrowse link
G Uchl3 ubiquitin C-terminal hydrolase L3 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955404:31,414,076...31,465,205
Ensembl chrNW_004955404:31,414,208...31,464,968
JBrowse link
G Ush2a usherin ISO RGD PMID:12160733 RGD:634438 NCBI chrNW_004955406:1,837,831...2,499,664
Ensembl chrNW_004955406:1,838,885...2,496,980
JBrowse link
G Vax2 ventral anterior homeobox 2 ISO (MGI:1349226|PMID:10595508) MGI PMID:10595508 MGI:1349226 NCBI chrNW_004955424:14,283,336...14,309,809
Ensembl chrNW_004955424:14,283,327...14,309,809
JBrowse link
G Xrn2 5'-3' exoribonuclease 2 ISO RGD PMID:23700402 RGD:11041783 NCBI chrNW_004955415:29,107,060...29,175,374
Ensembl chrNW_004955415:29,107,034...29,175,538
JBrowse link
G Znf513 zinc finger protein 513 involved_in ISO (PMID:20797688) UniProt PMID:20797688 NCBI chrNW_004955469:9,340,872...9,344,593
Ensembl chrNW_004955469:9,340,878...9,344,593
JBrowse link
retina layer formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO (MGI:5306539|PMID:21959375) UniProt PMID:21959375 MGI:5306539 NCBI chrNW_004955439:1,277,185...1,460,296
Ensembl chrNW_004955439:1,276,760...1,474,202
JBrowse link
G Arl6 ADP ribosylation factor like GTPase 6 ISO (MGI:4442100|PMID:20333246)
(MGI:5306530|PMID:22139371)
MGI PMID:20333246 PMID:22139371 MGI:4442100 MGI:5306530 NCBI chrNW_004955407:360,898...387,563
Ensembl chrNW_004955407:360,600...380,900
JBrowse link
G Calb1 calbindin 1 ISO (PMID:10741426) UniProtKB PMID:10741426 NCBI chrNW_004955417:6,944,300...6,969,341
Ensembl chrNW_004955417:6,942,900...6,969,502
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:3696487|PMID:17234588) MGI PMID:17234588 MGI:3696487 NCBI chrNW_004955406:33,817,754...34,005,937
Ensembl chrNW_004955406:33,817,605...34,005,943
JBrowse link
G Fat3 FAT atypical cadherin 3 ISO (MGI:5292419|PMID:21903076) MGI PMID:21903076 MGI:5292419 NCBI chrNW_004955414:1,467,087...2,083,914
Ensembl chrNW_004955414:1,472,067...1,962,265
JBrowse link
G Fjx1 four-jointed box kinase 1 ISO (MGI:5292419|PMID:21903076) MGI PMID:21903076 MGI:5292419 NCBI chrNW_004955422:10,731,004...10,733,522 JBrowse link
G Foxn4 forkhead box N4 ISO (MGI:3054139|PMID:15363391) UniProt PMID:15363391 MGI:3054139 NCBI chrNW_004955455:9,182,405...9,210,365
Ensembl chrNW_004955455:9,183,475...9,210,506
JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955435:17,201,866...17,257,371
Ensembl chrNW_004955435:17,172,651...17,257,371
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (MGI:4818711|PMID:20579985) DFLAT PMID:20579985 MGI:4818711 NCBI chrNW_004955494:3,365,826...3,554,735
Ensembl chrNW_004955494:3,393,049...3,554,844
JBrowse link
G Irx6 iroquois homeobox 6 ISO (MGI:5447580|PMID:23172916) MGI PMID:23172916 MGI:5447580 NCBI chrNW_004955433:12,889,025...12,895,090
Ensembl chrNW_004955433:12,889,001...12,895,121
JBrowse link
G Lhx1 LIM homeobox 1 ISO (PMID:10741426)
(MGI:3772525|PMID:18094249)
UniProtKB
UniProt
PMID:10741426 PMID:18094249 MGI:3772525 NCBI chrNW_004955451:1,037,936...1,048,501
Ensembl chrNW_004955451:1,037,825...1,048,501
JBrowse link
G Megf11 multiple EGF like domains 11 ISO (MGI:5316136|PMID:22407321) UniProt PMID:22407321 MGI:5316136 NCBI chrNW_004955450:9,355,134...9,634,747
Ensembl chrNW_004955450:9,355,060...9,632,119
JBrowse link
G Prom1 prominin 1 ISO (MGI:3838023|PMID:19228982) UniProt PMID:19228982 MGI:3838023 NCBI chrNW_004955480:7,955,501...8,059,537
Ensembl chrNW_004955480:7,961,389...8,059,589
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO (MGI:3691257|PMID:17075007) UniProt PMID:17075007 MGI:3691257 NCBI chrNW_004955429:5,807,804...5,809,522
Ensembl chrNW_004955429:5,808,124...5,809,522
JBrowse link
G Ptprm protein tyrosine phosphatase receptor type M involved_in ISO (PMID:14623235) UniProt PMID:14623235 NCBI chrNW_004955402:3,243,447...3,756,457
Ensembl chrNW_004955402:3,244,222...3,756,925
JBrowse link
G Rdh13 retinol dehydrogenase 13 ISO (MGI:5462166|PMID:22605914) MGI PMID:22605914 MGI:5462166 NCBI chrNW_004955567:1,091,636...1,108,648
Ensembl chrNW_004955567:1,091,636...1,108,732
JBrowse link
G Sdk2 sidekick cell adhesion molecule 2 ISO (MGI:5693671|PMID:26287463) UniProt PMID:26287463 MGI:5693671 NCBI chrNW_004955553:353,190...614,806
Ensembl chrNW_004955553:357,112...614,811
JBrowse link
G Slc1a1 solute carrier family 1 member 1 ISO (MGI:4414613|PMID:19766171), (MGI:6155272|PMID:29677370) MGI PMID:19766171 PMID:29677370 MGI:4414613 MGI:6155272 NCBI chrNW_004955434:8,790,685...8,879,757
Ensembl chrNW_004955434:8,790,685...8,879,757
JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO (PMID:20607706) UniProt PMID:20607706 NCBI chrNW_004955465:3,877,896...3,900,259
Ensembl chrNW_004955465:3,882,549...3,898,929
JBrowse link
G Tfap2b transcription factor AP-2 beta involved_in ISO (PMID:20607706) UniProt PMID:20607706 NCBI chrNW_004955411:7,143,095...7,171,285
Ensembl chrNW_004955411:7,142,607...7,170,467
JBrowse link
G Tspan12 tetraspanin 12 ISO (MGI:4410396|PMID:19837033) UniProt PMID:19837033 MGI:4410396 NCBI chrNW_004955479:2,570,937...2,636,884
Ensembl chrNW_004955479:2,570,937...2,635,857
JBrowse link
retina morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 ISO (MGI:3703109|PMID:17092954) MGI PMID:17092954 MGI:3703109 NCBI chrNW_004955444:14,458,307...14,460,441 JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:2675211|PMID:12915475), (MGI:3696487|PMID:17234588), (MGI:5608935|PMID:25147295) MGI PMID:12915475 PMID:17234588 PMID:25147295 MGI:2675211 MGI:3696487 MGI:5608935 NCBI chrNW_004955406:33,817,754...34,005,937
Ensembl chrNW_004955406:33,817,605...34,005,943
JBrowse link
G Dll1 delta like canonical Notch ligand 1 ISO (MGI:3848562|PMID:19389377) UniProt PMID:19389377 MGI:3848562 NCBI chrNW_004955411:3,478,943...3,486,541
Ensembl chrNW_004955411:3,478,033...3,486,604
JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (PMID:15346351) BHF-UCL PMID:15346351 NCBI chrNW_004955422:17,394,371...17,475,244
Ensembl chrNW_004955422:17,394,371...17,505,763
JBrowse link
G Lrp6 LDL receptor related protein 6 ISO (MGI:3823171|PMID:18985738) MGI PMID:18985738 MGI:3823171 NCBI chrNW_004955413:9,080,901...9,237,644
Ensembl chrNW_004955413:9,080,914...9,237,650
JBrowse link
G Man2a1 mannosidase alpha class 2A member 1 ISO (MGI:4453938|PMID:20144606) MGI PMID:20144606 MGI:4453938 NCBI chrNW_004955418:5,027,962...5,191,346
Ensembl chrNW_004955418:5,027,174...5,191,346
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A ISO (MGI:5789479|PMID:27008858) ARUK-UCL PMID:27008858 MGI:5789479 NCBI chrNW_004955452:17,430,850...17,443,830
Ensembl chrNW_004955452:17,430,219...17,443,830
JBrowse link
G Nectin3 nectin cell adhesion molecule 3 ISO (MGI:3604842|PMID:15728677) MGI PMID:15728677 MGI:3604842 NCBI chrNW_004955427:11,639,942...11,731,910
Ensembl chrNW_004955427:11,606,909...11,724,004
JBrowse link
G Prom1 prominin 1 involved_in ISO (PMID:18654668) BHF-UCL PMID:18654668 NCBI chrNW_004955480:7,955,501...8,059,537
Ensembl chrNW_004955480:7,961,389...8,059,589
JBrowse link
G Ptf1a pancreas associated transcription factor 1a ISO (MGI:3701413|PMID:17301087) MGI PMID:17301087 MGI:3701413 NCBI chrNW_004955429:5,807,804...5,809,522
Ensembl chrNW_004955429:5,808,124...5,809,522
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:4437581|PMID:20300562) MGI PMID:20300562 MGI:4437581 NCBI chrNW_004955599:578,165...580,055
Ensembl chrNW_004955599:573,426...579,812
JBrowse link
G Rp1 RP1 axonemal microtubule associated ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955454:13,781,556...14,082,310 JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955423:23,184,326...23,208,206
Ensembl chrNW_004955423:23,183,937...23,208,282
JBrowse link
G Rpgr retinitis pigmentosa GTPase regulator ISO (MGI:1354839|PMID:10725384) MGI PMID:10725384 MGI:1354839 NCBI chrNW_004955601:398,772...453,271 JBrowse link
G Sox2 SRY-box transcription factor 2 ISO (MGI:3624065|PMID:16651659) MGI PMID:16651659 MGI:3624065 NCBI chrNW_004955420:10,671,888...10,674,080
Ensembl chrNW_004955420:10,671,978...10,672,934
JBrowse link
G Vsx2 visual system homeobox 2 ISO (MGI:3701027|PMID:16854970), (MGI:79586|PMID:8630490) MGI PMID:8630490 PMID:16854970 MGI:3701027 MGI:79586 NCBI chrNW_004955523:1,192,035...1,207,949
Ensembl chrNW_004955523:1,193,686...1,210,641
JBrowse link
retina vasculature development in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin A receptor type 2B ISO (MGI:4436974|PMID:19903896) BHF-UCL PMID:19903896 MGI:4436974 NCBI chrNW_004955427:25,438,652...25,467,360
Ensembl chrNW_004955427:25,438,652...25,467,360
JBrowse link
G Acvrl1 activin A receptor like type 1 ISO (MGI:4436974|PMID:19903896) BHF-UCL PMID:19903896 MGI:4436974 NCBI chrNW_004955547:2,278,548...2,293,865
Ensembl chrNW_004955547:2,279,042...2,294,443
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO (MGI:4436974|PMID:19903896) BHF-UCL PMID:19903896 MGI:4436974 NCBI chrNW_004955457:12,235,780...12,315,680
Ensembl chrNW_004955457:12,235,780...12,316,727
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha ISO (MGI:4950335|PMID:21212189) MGI PMID:21212189 MGI:4950335 NCBI chrNW_004955466:8,000,311...8,022,497
Ensembl chrNW_004955466:8,000,044...8,022,497
JBrowse link
G LOC102009223 cytochrome P450 1B1 ISO (MGI:3829820|PMID:19005183) MGI PMID:19005183 MGI:3829820 NCBI chrNW_004955441:5,803,397...5,812,131
Ensembl chrNW_004955441:5,803,032...5,812,131
JBrowse link
G Pdgfb platelet derived growth factor subunit B ISO (MGI:5607451|PMID:25224828) MGI PMID:25224828 MGI:5607451 NCBI chrNW_004955413:25,150,702...25,166,987
Ensembl chrNW_004955413:25,148,062...25,166,987
JBrowse link
G Pdgfra platelet derived growth factor receptor alpha ISO (MGI:1931346|PMID:11239463) UniProt PMID:11239463 MGI:1931346 NCBI chrNW_004955447:16,570,652...16,613,410
Ensembl chrNW_004955447:16,569,909...16,612,373
JBrowse link
G Pdgfrb platelet derived growth factor receptor beta ISO (MGI:2680741|PMID:14624252)
(MGI:1931346|PMID:11239463)
UniProt PMID:11239463 PMID:14624252 MGI:1931346 MGI:2680741 NCBI chrNW_004955415:4,365,848...4,403,317
Ensembl chrNW_004955415:4,365,743...4,403,587
JBrowse link
G Rom1 retinal outer segment membrane protein 1 ISO (MGI:4437581|PMID:20300562) MGI PMID:20300562 MGI:4437581 NCBI chrNW_004955599:578,165...580,055
Ensembl chrNW_004955599:573,426...579,812
JBrowse link
retina vasculature morphogenesis in camera-type eye term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef15 Rho guanine nucleotide exchange factor 15 ISO (MGI:5441394|PMID:22535667) MGI PMID:22535667 MGI:5441394 NCBI chrNW_004955467:8,590,217...8,603,778
Ensembl chrNW_004955467:8,587,873...8,602,747
JBrowse link
G Clic4 chloride intracellular channel 4 ISO (MGI:3837628|PMID:19197003) MGI PMID:19197003 MGI:3837628 NCBI chrNW_004955452:4,479,783...4,534,115
Ensembl chrNW_004955452:4,479,783...4,534,115
JBrowse link
G Fzd4 frizzled class receptor 4 involved_in ISO (MGI:4366716|PMID:19837032)
(PMID:12172548), (PMID:15024691)
MGI
BHF-UCL
PMID:12172548 PMID:15024691 PMID:19837032 MGI:4366716 NCBI chrNW_004955414:6,094,585...6,103,910
Ensembl chrNW_004955414:6,094,585...6,098,865
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO (MGI:2178168|PMID:11956231)
(MGI:4366716|PMID:19837032)
(MGI:3790936|PMID:18263894)
MGI
RGD
PMID:11956231 PMID:18263894 PMID:19837032 PMID:32833527 MGI:2178168 MGI:3790936 MGI:4366716 RGD:40902996 NCBI chrNW_004955422:17,394,371...17,475,244
Ensembl chrNW_004955422:17,394,371...17,505,763
JBrowse link
G Ndp norrin cystine knot growth factor NDP ISO (MGI:4366716|PMID:19837032) MGI PMID:19837032 MGI:4366716 NCBI chrNW_004955516:4,218,703...4,244,774
Ensembl chrNW_004955516:4,218,703...4,244,846
JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:5562961|PMID:24401374) BHF-UCL PMID:24401374 MGI:5562961 NCBI chrNW_004955462:4,101,997...4,241,012
Ensembl chrNW_004955462:4,101,999...4,241,012
JBrowse link
G Rhoj ras homolog family member J ISO (MGI:5441394|PMID:22535667) MGI PMID:22535667 MGI:5441394 NCBI chrNW_004955466:6,476,822...6,564,890
Ensembl chrNW_004955466:6,476,822...6,564,988
JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO (MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:2680888 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754
JBrowse link
retinal bipolar neuron differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhlhe22 basic helix-loop-helix family member e22 ISO (MGI:3703109|PMID:17092954) MGI PMID:17092954 MGI:3703109 NCBI chrNW_004955444:14,458,307...14,460,441 JBrowse link
G Cabp4 calcium binding protein 4 ISO (MGI:3609280|PMID:16249514) MGI PMID:16249514 MGI:3609280 NCBI chrNW_004955422:18,023,639...18,028,845
Ensembl chrNW_004955422:18,023,639...18,028,845
JBrowse link
G Casz1 castor zinc finger 1 ISO (MGI:5630049|PMID:24467707) MGI PMID:24467707 MGI:5630049 NCBI chrNW_004955486:2,923,239...2,975,835 JBrowse link
G Ikzf1 IKAROS family zinc finger 1 ISO (MGI:5629913|PMID:25654255) MGI PMID:25654255 MGI:5629913 NCBI chrNW_004955456:3,617,988...3,721,791
Ensembl chrNW_004955456:3,635,380...3,721,791
JBrowse link
G Irx5 iroquois homeobox 5 ISO (MGI:3776945|PMID:18322081) MGI PMID:18322081 MGI:3776945 NCBI chrNW_004955433:12,518,786...12,522,744
Ensembl chrNW_004955433:12,519,338...12,522,118
JBrowse link
G Irx6 iroquois homeobox 6 ISO (MGI:5447580|PMID:23172916) MGI PMID:23172916 MGI:5447580 NCBI chrNW_004955433:12,889,025...12,895,090
Ensembl chrNW_004955433:12,889,001...12,895,121
JBrowse link
G Vsx1 visual system homeobox 1 ISO (MGI:3039332|PMID:15043821)
(MGI:3776945|PMID:18322081)
(MGI:3029641|PMID:14745032)
MGI PMID:14745032 PMID:15043821 PMID:18322081 MGI:3029641 MGI:3039332 MGI:3776945 NCBI chrNW_004955415:31,174,155...31,180,718
Ensembl chrNW_004955415:31,175,452...31,180,655
JBrowse link
G Vsx2 visual system homeobox 2 ISO (MGI:79586|PMID:8630490) MGI PMID:8630490 MGI:79586 NCBI chrNW_004955523:1,192,035...1,207,949
Ensembl chrNW_004955523:1,193,686...1,210,641
JBrowse link
G Zhx2 zinc fingers and homeoboxes 2 ISO (MGI:6214404|PMID:30146259) UniProt PMID:30146259 MGI:6214404 NCBI chrNW_004955540:1,805,648...1,890,409
Ensembl chrNW_004955540:1,805,666...1,890,409
JBrowse link
retinal blood vessel morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a1 collagen type IV alpha 1 chain involved_in ISO (PMID:20818663) BHF-UCL PMID:20818663 NCBI chrNW_004955404:2,196,193...2,327,324
Ensembl chrNW_004955404:2,260,029...2,326,074
JBrowse link
G Fzd4 frizzled class receptor 4 ISO (MGI:3621833|PMID:15035989) BHF-UCL PMID:15035989 MGI:3621833 NCBI chrNW_004955414:6,094,585...6,103,910
Ensembl chrNW_004955414:6,094,585...6,098,865
JBrowse link
G Lama1 laminin subunit alpha 1 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955402:4,281,415...4,397,158
Ensembl chrNW_004955402:4,285,492...4,400,348
JBrowse link
G LOC102009223 cytochrome P450 1B1 ISO (MGI:4431324|PMID:20032512) UniProt PMID:20032512 MGI:4431324 NCBI chrNW_004955441:5,803,397...5,812,131
Ensembl chrNW_004955441:5,803,032...5,812,131
JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (MGI:6092915|PMID:27031698)
(PMID:15024691), (PMID:15346351)
CACAO
BHF-UCL
PMID:15024691 PMID:15346351 PMID:27031698 MGI:6092915 NCBI chrNW_004955422:17,394,371...17,475,244
Ensembl chrNW_004955422:17,394,371...17,505,763
JBrowse link
retinal cell programmed cell death term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator ISO (MGI:2677551|PMID:14517994) MGI PMID:14517994 MGI:2677551 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244
JBrowse link
G Faslg Fas ligand ISO (MGI:2677551|PMID:14517994) MGI PMID:14517994 MGI:2677551 NCBI chrNW_004955406:13,098,479...13,107,045
Ensembl chrNW_004955406:13,098,662...13,107,389
JBrowse link
G Slc4a7 solute carrier family 4 member 7 ISO (MGI:2680888|PMID:12808454) MGI PMID:12808454 MGI:2680888 NCBI chrNW_004955430:18,991,615...19,059,590
Ensembl chrNW_004955430:18,991,301...19,067,754
JBrowse link
retinal cone cell development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahi1 Abelson helper integration site 1 ISO (MGI:4437526|PMID:20081859) CACAO PMID:20081859 MGI:4437526 NCBI chrNW_004955439:1,277,185...1,460,296
Ensembl chrNW_004955439:1,276,760...1,474,202
JBrowse link
G Cabp4 calcium binding protein 4 ISO (MGI:3609280|PMID:16249514) MGI PMID:16249514 MGI:3609280 NCBI chrNW_004955422:18,023,639...18,028,845
Ensembl chrNW_004955422:18,023,639...18,028,845
JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955470:4,884,054...4,907,151
Ensembl chrNW_004955470:4,884,309...4,906,902
JBrowse link
G Crb2 crumbs cell polarity complex component 2 ISO (MGI:5461109|PMID:23001562) UniProt PMID:23001562 MGI:5461109 NCBI chrNW_004955419:4,604,883...4,626,675
Ensembl chrNW_004955419:4,607,507...4,626,608
JBrowse link
G Dio3 iodothyronine deiodinase 3 ISO (MGI:4441081|PMID:20203194) MGI PMID:20203194 MGI:4441081 NCBI chrNW_004955538:1,042,949...1,045,038 JBrowse link
G Gnat2 G protein subunit alpha transducin 2 ISO (MGI:3714271|PMID:17065522), (MGI:4849309|PMID:21052544) MGI PMID:17065522 PMID:21052544 MGI:3714271 MGI:4849309 NCBI chrNW_004955435:13,009,147...13,021,968
Ensembl chrNW_004955435:13,009,147...13,021,968
JBrowse link
G Hcn1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955446:17,146,915...17,457,843
Ensembl chrNW_004955446:17,151,311...17,457,888
JBrowse link
G Pde6c phosphodiesterase 6C ISO (MGI:4849309|PMID:21052544) MGI PMID:21052544 MGI:4849309 NCBI chrNW_004955507:129,678...179,586
Ensembl chrNW_004955507:129,678...179,305
JBrowse link
G Rorb RAR related orphan receptor B ISO (MGI:3652638|PMID:16574740) UniProt PMID:16574740 MGI:3652638 NCBI chrNW_004955512:4,362,287...4,541,432
Ensembl chrNW_004955512:4,362,287...4,541,445
JBrowse link
G Rp1 RP1 axonemal microtubule associated ISO (MGI:2676521|PMID:14507858) UniProt PMID:14507858 MGI:2676521 NCBI chrNW_004955454:13,781,556...14,082,310 JBrowse link
G Thrb thyroid hormone receptor beta ISO (MGI:4441081|PMID:20203194) MGI PMID:20203194 MGI:4441081 NCBI chrNW_004955430:15,992,146...16,322,696
Ensembl chrNW_004955430:15,992,146...16,323,238
JBrowse link
G Thy1 Thy-1 cell surface antigen ISO (MGI:1349255|PMID:10567740) UniProt PMID:10567740 MGI:1349255 NCBI chrNW_004955412:20,480,284...20,484,958
Ensembl chrNW_004955412:20,480,284...20,484,958