ONTOLOGY REPORT - ANNOTATIONS |
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Term: | visual system development |
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Accession: | GO:0150063
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browse the term
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Definition: | The process whose specific outcome is the progression of the visual system over time, from its formation to the mature structure, including the eye, parts of the central nervous system (CNS) involved in processing of visual inputs, and connecting nerve pathways. |
Synonyms: | related_synonym: | optic pathway development; visual pathway development |
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P2ry12 |
purinergic receptor P2Y12 |
involved_in |
ISO |
UniProtKB:Q9Z0D9 (MGI:5806217|PMID:26948129) |
RGD |
PMID:26948129 |
MGI:5806217 |
NCBI chr 2:143,481,468...143,523,340
Ensembl chr 2:143,481,430...143,523,361
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Barhl2 |
BarH-like homeobox 2 |
acts_upstream_of_or_within |
ISO |
(MGI:3039051|PMID:14998930) |
RGD |
PMID:14998930 |
MGI:3039051 |
NCBI chr14:3,340,465...3,345,362
Ensembl chr14:3,340,465...3,345,353
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Bhlhe22 |
basic helix-loop-helix family, member e22 |
acts_upstream_of_or_within |
ISO |
MGI:3707409 (MGI:3703109|PMID:17092954) |
RGD |
PMID:17092954 |
MGI:3703109 |
NCBI chr 2:100,486,400...100,489,510
Ensembl chr 2:100,486,400...100,489,510
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Foxn4 |
forkhead box N4 |
involved_in acts_upstream_of_or_within |
ISO |
(MGI:3054139|PMID:15363391) MGI:3054789 (MGI:3054139|PMID:15363391) |
RGD |
PMID:15363391 |
MGI:3054139 |
NCBI chr12:42,336,706...42,359,932
Ensembl chr12:42,340,323...42,359,921
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Gdf11 |
growth differentiation factor 11 |
acts_upstream_of |
ISO |
(MGI:3581514|PMID:15976303) |
RGD |
PMID:15976303 |
MGI:3581514 |
NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
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Hes1 |
hes family bHLH transcription factor 1 |
acts_upstream_of involved_in |
ISO IEA |
MGI:2149672 (MGI:3588911|PMID:16038893) GO_REF:0000107 |
RGD Ensembl |
PMID:16038893 |
GO_REF:0000107 MGI:3588911 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Ikzf1 |
IKAROS family zinc finger 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5629913|PMID:25654255) |
RGD |
PMID:25654255 |
MGI:5629913 |
NCBI chr14:86,255,065...86,340,839
Ensembl chr14:86,255,065...86,342,416
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Miat |
myocardial infarction associated transcript |
acts_upstream_of_or_within |
ISO |
(MGI:4458994|PMID:20459797) |
RGD |
PMID:20459797 |
MGI:4458994 |
NCBI chr12:44,414,620...44,429,852
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Neurod1 |
neuronal differentiation 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:2158684|PMID:11861467) |
UniProt RGD |
PMID:11861467 |
GO_REF:0000024 MGI:2158684 |
NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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Neurod4 |
neuronal differentiation 4 |
involved_in |
ISO |
(MGI:2158684|PMID:11861467) |
RGD |
PMID:11861467 |
MGI:2158684 |
NCBI chr 7:7,090,048...7,102,018
Ensembl chr 7:7,090,045...7,102,030
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Ptf1a |
pancreas associated transcription factor 1a |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:3701996 (MGI:3701413|PMID:17301087) (MGI:3691257|PMID:17075007) |
UniProt RGD |
PMID:17075007 PMID:17301087 |
GO_REF:0000024 MGI:3691257 MGI:3701413 |
NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
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Rorb |
RAR-related orphan receptor B |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5546314|PMID:23652001) |
UniProt RGD |
PMID:23652001 |
GO_REF:0000024 MGI:5546314 |
NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390
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Tgif1 |
TGFB-induced factor homeobox 1 |
acts_upstream_of |
ISO |
(MGI:3826282|PMID:18973577) |
RGD |
PMID:18973577 |
MGI:3826282 |
NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
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Tgif2 |
TGFB-induced factor homeobox 2 |
acts_upstream_of |
ISO |
(MGI:3826300|PMID:18926818) |
RGD |
PMID:18926818 |
MGI:3826300 |
NCBI chr 3:145,333,152...145,348,599
Ensembl chr 3:145,333,418...145,348,596
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Abi2 |
abl-interactor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3526871 (MGI:3525751|PMID:15572692) |
RGD |
PMID:15572692 |
MGI:3525751 |
NCBI chr 9:61,856,379...61,904,029
Ensembl chr 9:61,827,139...61,905,699
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Ahr |
aryl hydrocarbon receptor |
involved_in |
ISO |
(MGI:1889403|PMID:10973493) |
RGD |
PMID:10973493 |
MGI:1889403 |
NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
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Aldh1a2 |
aldehyde dehydrogenase 1 family, member A2 |
acts_upstream_of_or_within |
ISO |
MGI:1857891|MGI:2180721 (MGI:3055706|PMID:15366004), (MGI:3612223|PMID:16368932) |
RGD |
PMID:15366004 PMID:16368932 |
MGI:3055706 MGI:3612223 |
NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
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Arhgap35 |
Rho GTPase activating protein 35 |
acts_upstream_of_or_within |
ISO |
MGI:2448591 (MGI:1926242|PMID:11044403) |
RGD |
PMID:11044403 |
MGI:1926242 |
NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
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B9d1 |
B9 domain containing 1 |
acts_upstream_of_or_within |
ISO |
MGI:5301332 (MGI:5300833|PMID:22179047) |
RGD |
PMID:22179047 |
MGI:5300833 |
NCBI chr10:46,186,222...46,196,309
Ensembl chr10:46,186,691...46,196,008
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Bmp4 |
bone morphogenetic protein 4 |
acts_upstream_of_or_within |
ISO |
MGI:1857137|MGI:2137520 (MGI:1095762|PMID:9268572), (MGI:3043486|PMID:14681194) |
RGD |
PMID:9268572 PMID:14681194 |
MGI:1095762 MGI:3043486 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Bmpr1b |
bone morphogenetic protein receptor type 1B |
acts_upstream_of_or_within |
ISO |
MGI:1338938 (MGI:3574003|PMID:15673568) |
RGD |
PMID:15673568 |
MGI:3574003 |
NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
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Cacna1c |
calcium voltage-gated channel subunit alpha1 C |
involved_in |
ISO |
(PMID:15454078) |
RGD |
PMID:15454078 |
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NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
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Cc2d2a |
coiled-coil and C2 domain containing 2A |
acts_upstream_of_or_within |
ISO |
MGI:5708063 (MGI:5696765|PMID:24947469) |
RGD |
PMID:24947469 |
MGI:5696765 |
NCBI chr14:67,349,004...67,435,883
Ensembl chr14:67,351,353...67,435,949
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Cdkn1c |
cyclin-dependent kinase inhibitor 1C |
acts_upstream_of_or_within |
ISO |
MGI:1933758|MGI:3840687 (MGI:3839493|PMID:19276117) |
RGD |
PMID:19276117 |
MGI:3839493 |
NCBI chr 1:198,655,394...198,658,097
Ensembl chr 1:198,655,407...198,658,048
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Cep290 |
centrosomal protein 290 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 7:35,310,071...35,399,392
Ensembl chr 7:35,310,199...35,399,392
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Chd7 |
chromodomain helicase DNA binding protein 7 |
acts_upstream_of_or_within |
ISO |
MGI:3588650 (MGI:3611161|PMID:16207732) |
RGD |
PMID:16207732 |
MGI:3611161 |
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
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Cryaa |
crystallin, alpha A |
acts_upstream_of_or_within |
ISO |
MGI:1916503 (MGI:2682441|PMID:12546709) |
RGD |
PMID:12546709 |
MGI:2682441 |
NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349
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Cryab |
crystallin, alpha B |
acts_upstream_of_or_within |
ISO |
MGI:88515 (MGI:2682441|PMID:12546709) |
RGD |
PMID:12546709 |
MGI:2682441 |
NCBI chr 8:51,093,441...51,099,161
Ensembl chr 8:51,093,441...51,099,157
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Cryba1 |
crystallin, beta A1 |
acts_upstream_of_or_within |
ISO |
MGI:1857969 (MGI:1350675|PMID:10585769) |
RGD |
PMID:10585769 |
MGI:1350675 |
NCBI chr10:62,608,373...62,614,726
Ensembl chr10:62,608,383...62,614,726
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Cryba4 |
crystallin, beta A4 |
involved_in |
ISO |
(PMID:16960806) |
RGD |
PMID:16960806 |
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NCBI chr12:44,378,734...44,393,226
Ensembl chr12:44,378,737...44,393,221
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Crybb2 |
crystallin, beta B2 |
acts_upstream_of_or_within |
IEP ISO |
MGI:2137511 (MGI:2137502|PMID:11381063) |
RGD |
PMID:11381063 PMID:8706714 |
MGI:2137502, RGD:1298813 |
NCBI chr12:43,569,747...43,579,671
Ensembl chr12:43,569,747...43,579,671
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Crygc |
crystallin, gamma C |
acts_upstream_of_or_within |
ISO |
MGI:2176919 (MGI:2156903|PMID:11773036) |
RGD |
PMID:11773036 |
MGI:2156903 |
NCBI chr 9:66,451,591...66,453,626
Ensembl chr 9:66,451,593...66,453,626
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Cyp1a1 |
cytochrome P450, family 1, subfamily a, polypeptide 1 |
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IEP |
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RGD |
PMID:15967433 |
RGD:2306661 |
NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125
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Efemp1 |
EGF containing fibulin extracellular matrix protein 1 |
involved_in |
ISO |
(PMID:25406291) |
RGD |
PMID:25406291 |
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NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018
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Fat1 |
FAT atypical cadherin 1 |
involved_in |
ISO |
MGI:2662293 (MGI:5766588|PMID:26114487) |
RGD |
PMID:26114487 |
MGI:5766588 |
NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
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Fbn1 |
fibrillin 1 |
involved_in |
ISO |
(PMID:25406291) |
RGD |
PMID:25406291 |
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NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
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Fbn2 |
fibrillin 2 |
involved_in |
ISO |
(PMID:25406291) |
RGD |
PMID:25406291 |
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NCBI chr18:51,499,737...51,703,976
Ensembl chr18:51,499,737...51,703,976
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Fkbp8 |
FKBP prolyl isomerase 8 |
acts_upstream_of_or_within |
ISO |
MGI:3042750 (MGI:3039989|PMID:15105374) |
RGD |
PMID:15105374 |
MGI:3039989 |
NCBI chr16:18,895,608...18,902,648
Ensembl chr16:18,893,576...18,902,612
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Foxc1 |
forkhead box C1 |
acts_upstream_of_or_within |
ISO |
MGI:1856705|MGI:1857869 (MGI:1340945|PMID:10395790), (MGI:1355577|PMID:10767326) |
RGD |
PMID:10395790 PMID:10767326 |
MGI:1340945 MGI:1355577 |
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
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Foxc2 |
forkhead box C2 |
acts_upstream_of_or_within |
ISO |
MGI:1857865 (MGI:1355577|PMID:10767326) |
RGD |
PMID:10767326 |
MGI:1355577 |
NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737
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Foxe3 |
forkhead box E3 |
acts_upstream_of_or_within |
ISO |
MGI:2387330 (MGI:1932584|PMID:11309658) |
RGD |
PMID:11309658 |
MGI:1932584 |
NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454
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Foxp2 |
forkhead box P2 |
acts_upstream_of_or_within |
ISO |
MGI:3723630 (MGI:3723373|PMID:17619227) |
RGD |
PMID:17619227 |
MGI:3723373 |
NCBI chr 4:43,133,827...43,712,442
Ensembl chr 4:43,133,912...43,711,683
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Gas1 |
growth arrest-specific 1 |
acts_upstream_of_or_within |
ISO |
MGI:2388397 (MGI:3713422|PMID:17525797) |
RGD |
PMID:17525797 |
MGI:3713422 |
NCBI chr17:4,482,014...4,485,155
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Gja8 |
gap junction protein, alpha 8 |
acts_upstream_of_or_within |
ISO |
MGI:2137525|MGI:3052418 (MGI:2156142|PMID:11782410), (MGI:3047041|PMID:15253273) |
RGD |
PMID:11782410 PMID:15253273 |
MGI:2156142 MGI:3047041 |
NCBI chr 2:184,490,840...184,492,456
Ensembl chr 2:184,490,840...184,492,456
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Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
ISO |
MGI:98297 (MGI:3807419|PMID:18582859) |
RGD |
PMID:18582859 |
MGI:3807419 |
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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Gpd2 |
glycerol-3-phosphate dehydrogenase 2 |
acts_upstream_of_or_within |
ISO |
MGI:1915913 (MGI:4947900|PMID:21296886) |
RGD |
PMID:21296886 |
MGI:4947900 |
NCBI chr 3:41,800,552...41,937,729
Ensembl chr 3:41,801,930...41,936,901
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Grhl2 |
grainyhead-like transcription factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:4942413 (MGI:4943100|PMID:21377456) |
RGD |
PMID:21377456 |
MGI:4943100 |
NCBI chr 7:68,400,287...68,530,269
Ensembl chr 7:68,400,477...68,530,258
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Hes5 |
hes family bHLH transcription factor 5 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3703278|PMID:17331197) |
UniProt RGD |
PMID:17331197 |
GO_REF:0000024 MGI:3703278 |
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
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Hesx1 |
HESX homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3822474 (MGI:3821905|PMID:19093031) |
RGD |
PMID:19093031 |
MGI:3821905 |
NCBI chr16:2,191,852...2,193,957
Ensembl chr16:2,191,852...2,193,957
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Hnrnpk |
heterogeneous nuclear ribonucleoprotein K |
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IEP |
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RGD |
PMID:16488668 |
RGD:10002779 |
NCBI chr17:6,262,936...6,275,001
Ensembl chr17:6,262,998...6,274,997
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Hsf4 |
heat shock transcription factor 4 |
acts_upstream_of_or_within |
ISO |
MGI:3056560|MGI:3057199 (MGI:3056833|PMID:15483628), (MGI:3721138|PMID:16595169) |
RGD |
PMID:15483628 PMID:16595169 |
MGI:3056833 MGI:3721138 |
NCBI chr19:33,147,755...33,153,479
Ensembl chr19:33,147,755...33,153,479
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Ihh |
Indian hedgehog signaling molecule |
acts_upstream_of_or_within |
ISO |
MGI:1934258 (MGI:3807419|PMID:18582859) |
RGD |
PMID:18582859 |
MGI:3807419 |
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
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Jag1 |
jagged canonical Notch ligand 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857713 (MGI:1336582|PMID:10196361) |
RGD |
PMID:10196361 |
MGI:1336582 |
NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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Lama1 |
laminin subunit alpha 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
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Lim2 |
lens intrinsic membrane protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:1862040 (MGI:1197732|PMID:9238094) |
RGD |
PMID:9238094 |
MGI:1197732 |
NCBI chr 1:93,837,597...93,843,769
Ensembl chr 1:93,837,597...93,843,769
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Lmx1b |
LIM homeobox transcription factor 1 beta |
acts_upstream_of_or_within |
ISO |
MGI:2158463|MGI:2386570|MGI:3714802 (MGI:1353150|PMID:10660670), (MGI:4461349|PMID:20568247) |
RGD |
PMID:10660670 PMID:20568247 |
MGI:1353150 MGI:4461349 |
NCBI chr 3:16,862,195...16,940,899
Ensembl chr 3:16,862,195...16,940,899
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Mab21l1 |
mab-21 like 1 |
acts_upstream_of_or_within |
ISO |
(MGI:2652201|PMID:12642482) |
RGD |
PMID:12642482 |
MGI:2652201 |
NCBI chr 2:139,943,496...139,945,885
Ensembl chr 2:139,943,496...139,945,885
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Mab21l2 |
mab-21 like 2 |
acts_upstream_of_or_within |
ISO |
MGI:3511363 (MGI:3510098|PMID:15385160) |
RGD |
PMID:15385160 |
MGI:3510098 |
NCBI chr 2:171,946,573...171,949,655
Ensembl chr 2:171,946,573...171,949,655
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Map3k1 |
mitogen-activated protein kinase kinase kinase 1 |
acts_upstream_of_or_within |
ISO |
MGI:2676654 (MGI:2674169|PMID:12941696) |
RGD |
PMID:12941696 |
MGI:2674169 |
NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:43,350,098...43,414,463
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Med1 |
mediator complex subunit 1 |
acts_upstream_of_or_within |
ISO |
MGI:2684189 (MGI:2682174|PMID:14500757) |
RGD |
PMID:14500757 |
MGI:2682174 |
NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
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Mitf |
melanocyte inducing transcription factor |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:88401 (MGI:3512656|PMID:15576400) GO_REF:0000107 |
RGD Ensembl |
PMID:15576400 |
GO_REF:0000107 MGI:3512656 |
NCBI chr 4:130,409,020...130,621,145
Ensembl chr 4:130,409,217...130,621,145
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Mterf4 |
mitochondrial transcription termination factor 4 |
acts_upstream_of_or_within |
ISO |
MGI:5288506 (MGI:5287350|PMID:21531335) |
RGD |
PMID:21531335 |
MGI:5287350 |
NCBI chr 9:93,834,162...93,838,838
Ensembl chr 9:93,834,144...93,838,864
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Mtnr1a |
melatonin receptor 1A |
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IEP |
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RGD |
PMID:12890503 |
RGD:9588674 |
NCBI chr16:47,144,461...47,163,919
Ensembl chr16:47,144,461...47,163,919
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Mtnr1b |
melatonin receptor 1B |
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IEP |
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RGD |
PMID:12890503 |
RGD:9588674 |
NCBI chr 8:12,638,219...12,652,737
Ensembl chr 8:12,638,219...12,652,737
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G |
Myf5 |
myogenic factor 5 |
acts_upstream_of_or_within |
ISO |
MGI:1857973|MGI:3055340 (MGI:3849775|PMID:19531352) |
RGD |
PMID:19531352 |
MGI:3849775 |
NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
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Neurod1 |
neuronal differentiation 1 |
acts_upstream_of_or_within |
ISO |
MGI:108055 (MGI:2158684|PMID:11861467) |
RGD |
PMID:11861467 |
MGI:2158684 |
NCBI chr 3:64,360,222...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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G |
Neurod4 |
neuronal differentiation 4 |
acts_upstream_of_or_within |
ISO |
MGI:1339708 (MGI:2158684|PMID:11861467) |
RGD |
PMID:11861467 |
MGI:2158684 |
NCBI chr 7:7,090,048...7,102,018
Ensembl chr 7:7,090,045...7,102,030
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Nfix |
nuclear factor I X |
involved_in |
ISO |
MGI:3802571 (MGI:3801392|PMID:18477394) |
RGD |
PMID:18477394 |
MGI:3801392 |
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
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Nr2e1 |
nuclear receptor subfamily 2, group E, member 1 |
acts_upstream_of_or_within |
ISO |
MGI:2176490|MGI:2176560 (MGI:3054148|PMID:15371513), (MGI:3582135|PMID:16000615) |
RGD |
PMID:15371513 PMID:16000615 |
MGI:3054148 MGI:3582135 |
NCBI chr20:46,050,134...46,070,569
Ensembl chr20:46,050,414...46,073,949
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Pax2 |
paired box 2 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1857673 (MGI:2662558|PMID:12756174) |
UniProt RGD |
PMID:12756174 |
GO_REF:0000024 MGI:2662558 |
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
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Pax6 |
paired box 6 |
acts_upstream_of_or_within |
ISO |
MGI:102764|MGI:108564|MGI:1856158|MGI:1931308|MGI:1934347|MGI:1934348 (MGI:1927276|PMID:11069887), (MGI:1928799|PMID:11062307), (MGI:2181466|PMID:12072567), (MGI:2384485|PMID:12183364), (MGI:2654287|PMID:12648492), (MGI:2662558|PMID:12756174), (MGI:3584303|PMID:16080917) |
RGD |
PMID:11062307 PMID:11069887 PMID:12072567 PMID:12183364 PMID:12648492 PMID:12756174 PMID:16080917 More...
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MGI:1927276 MGI:1928799 MGI:2181466 MGI:2384485 MGI:2654287 MGI:2662558 MGI:3584303 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Pcnt |
pericentrin |
acts_upstream_of_or_within |
ISO |
MGI:4340776 (MGI:5696764|PMID:25220058) |
RGD |
PMID:25220058 |
MGI:5696764 |
NCBI chr20:12,190,597...12,278,723
Ensembl chr20:12,191,648...12,278,710
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G |
Pitx2 |
paired-like homeodomain 2 |
involved_in |
ISO |
(PMID:9618168) |
RGD |
PMID:9618168 |
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NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
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G |
Pknox1 |
PBX/knotted 1 homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3530910 (MGI:3653971|PMID:16847320) |
RGD |
PMID:16847320 |
MGI:3653971 |
NCBI chr20:9,662,866...9,705,030
Ensembl chr20:9,662,899...9,703,727
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G |
Prss56 |
serine protease 56 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:21397065) MGI:5444189 (MGI:5441705|PMID:21532570) |
RGD |
PMID:21397065 PMID:21532570 |
MGI:5441705 |
NCBI chr 9:87,842,806...87,859,978
Ensembl chr 9:87,854,805...87,859,978
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Rab3gap1 |
RAB3 GTPase activating protein catalytic subunit 1 |
involved_in |
ISO |
(PMID:20512159) |
RGD |
PMID:20512159 |
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NCBI chr13:39,355,698...39,429,154
Ensembl chr13:39,352,247...39,429,169
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G |
Rarg |
retinoic acid receptor, gamma |
acts_upstream_of_or_within |
ISO |
MGI:98214 (MGI:1096258|PMID:9376317) |
RGD |
PMID:9376317 |
MGI:1096258 |
NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
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G |
Rax |
retina and anterior neural fold homeobox |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856862|MGI:2152531 (MGI:1929394|PMID:11105055), (MGI:3575215|PMID:15789424), (MGI:48767|PMID:17247120), (MGI:54439|PMID:640224), (MGI:61292|PMID:13970081) |
Ensembl RGD |
PMID:640224 PMID:11105055 PMID:13970081 PMID:15789424 PMID:17247120 |
GO_REF:0000107 MGI:1929394 MGI:3575215 MGI:48767 MGI:54439 MGI:61292 |
NCBI chr18:59,463,737...59,467,431
Ensembl chr18:59,463,737...59,467,431
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G |
Rcn1 |
reticulocalbin 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4355498|PMID:19474196) |
RGD |
PMID:19474196 |
MGI:4355498 |
NCBI chr 3:91,841,052...91,855,295
Ensembl chr 3:91,841,052...91,855,295
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G |
Rpe65 |
retinoid isomerohydrolase RPE65 |
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IEP |
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RGD |
PMID:9512345 |
RGD:633787 |
NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403
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G |
Rpgrip1l |
Rpgrip1-like |
acts_upstream_of_or_within |
ISO |
MGI:3716208 (MGI:3715393|PMID:17553904), (MGI:3716248|PMID:17558409) |
RGD |
PMID:17553904 PMID:17558409 |
MGI:3715393 MGI:3716248 |
NCBI chr19:15,692,189...15,785,083
Ensembl chr19:15,692,150...15,785,083
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G |
Rxra |
retinoid X receptor alpha |
acts_upstream_of_or_within |
ISO |
MGI:97858 (MGI:1096258|PMID:9376317) |
RGD |
PMID:9376317 |
MGI:1096258 |
NCBI chr 3:10,989,832...11,076,366
Ensembl chr 3:10,989,832...11,073,712
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G |
Shh |
sonic hedgehog signaling molecule |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1934268|MGI:3052661|MGI:95729 (MGI:2385969|PMID:12195432), (MGI:2662556|PMID:12756179), (MGI:3608482|PMID:16236765), (MGI:3807419|PMID:18582859) |
Ensembl RGD |
PMID:12195432 PMID:12756179 PMID:16236765 PMID:18582859 |
GO_REF:0000107 MGI:2385969 MGI:2662556 MGI:3608482 MGI:3807419 |
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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G |
Six3 |
SIX homeobox 3 |
acts_upstream_of_or_within |
ISO |
MGI:97490 (MGI:2181466|PMID:12072567) |
RGD |
PMID:12072567 |
MGI:2181466 |
NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
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G |
Ski |
Ski proto-oncogene |
acts_upstream_of_or_within |
ISO |
MGI:2177555 (MGI:2176418|PMID:11731796) |
RGD |
PMID:11731796 |
MGI:2176418 |
NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
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G |
Slc25a25 |
solute carrier family 25 member 25 |
acts_upstream_of_or_within |
ISO |
MGI:99778 (MGI:4947900|PMID:21296886) |
RGD |
PMID:21296886 |
MGI:4947900 |
NCBI chr 3:15,708,702...15,742,195
Ensembl chr 3:15,708,703...15,742,216
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G |
Slitrk6 |
SLIT and NTRK-like family, member 6 |
acts_upstream_of_or_within |
ISO |
MGI:4417931 (MGI:5513052|PMID:23543054) |
RGD |
PMID:23543054 |
MGI:5513052 |
NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
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G |
Stra6 |
signaling receptor and transporter of retinol STRA6 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:21901792) |
UniProt RGD |
PMID:21901792 |
GO_REF:0000024 |
NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860
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G |
Tbc1d20 |
TBC1 domain family, member 20 |
acts_upstream_of_or_within |
ISO |
MGI:1856684 (MGI:3029604|PMID:14757819) |
RGD |
PMID:14757819 |
MGI:3029604 |
NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121
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G |
Tbc1d32 |
TBC1 domain family, member 32 |
acts_upstream_of_or_within |
ISO |
MGI:4127851|MGI:4440463 (MGI:4439200|PMID:20159594) |
RGD |
PMID:20159594 |
MGI:4439200 |
NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415
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G |
Tmem231 |
transmembrane protein 231 |
acts_upstream_of_or_within |
ISO |
MGI:4284576 (MGI:5300833|PMID:22179047) |
RGD |
PMID:22179047 |
MGI:5300833 |
NCBI chr19:39,883,077...39,904,296
Ensembl chr19:39,883,077...39,904,269
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G |
Tsku |
tsukushi, small leucine rich proteoglycan |
acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (MGI:5285004|PMID:21856951) |
UniProt RGD |
PMID:21856951 |
GO_REF:0000024 MGI:5285004 |
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
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G |
Twsg1 |
twisted gastrulation BMP signaling modulator 1 |
acts_upstream_of_or_within |
ISO |
MGI:88180 (MGI:3043486|PMID:14681194) |
RGD |
PMID:14681194 |
MGI:3043486 |
NCBI chr 9:105,533,116...105,567,525
Ensembl chr 9:105,533,136...105,567,479
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G |
Vax1 |
ventral anterior homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:1346018 (MGI:3578573|PMID:15905411) |
RGD |
PMID:15905411 |
MGI:3578573 |
NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192
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G |
Vax2 |
ventral anterior homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:1277163 (MGI:3578573|PMID:15905411) |
RGD |
PMID:15905411 |
MGI:3578573 |
NCBI chr 4:116,195,576...116,219,597
Ensembl chr 4:116,195,528...116,219,594
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G |
Vsx2 |
visual system homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:104554 (MGI:3512656|PMID:15576400) |
RGD |
PMID:15576400 |
MGI:3512656 |
NCBI chr 6:104,214,842...104,240,264
Ensembl chr 6:104,217,230...104,240,018
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G |
Wdpcp |
WD repeat containing planar cell polarity effector |
acts_upstream_of_or_within |
ISO |
MGI:5558098|MGI:5558100 (MGI:5544506|PMID:24302887) |
RGD |
PMID:24302887 |
MGI:5544506 |
NCBI chr14:95,645,955...95,977,120
Ensembl chr14:95,646,038...95,977,113
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G |
Wt1 |
WT1 transcription factor |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:2183642 (MGI:3574744|PMID:15716344) MGI:1857268 (MGI:2176638|PMID:11889045) |
UniProt RGD |
PMID:11889045 PMID:15716344 |
GO_REF:0000024 MGI:2176638 MGI:3574744 |
NCBI chr 3:91,566,540...91,613,653
Ensembl chr 3:91,567,001...91,613,643
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Aqp1 |
aquaporin 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857807 (MGI:2180433|PMID:11891232) |
RGD |
PMID:11891232 |
MGI:2180433 |
NCBI chr 4:84,482,512...84,494,690
Ensembl chr 4:84,482,512...84,494,690
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G |
Aqp5 |
aquaporin 5 |
acts_upstream_of_or_within |
ISO |
MGI:2150059 (MGI:2180433|PMID:11891232) |
RGD |
PMID:11891232 |
MGI:2180433 |
NCBI chr 7:130,722,675...130,726,207
Ensembl chr 7:130,721,748...130,726,209
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G |
Bmp4 |
bone morphogenetic protein 4 |
acts_upstream_of_or_within |
ISO |
MGI:88180 (MGI:1095762|PMID:9268572) |
RGD |
PMID:9268572 |
MGI:1095762 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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G |
Bmp7 |
bone morphogenetic protein 7 |
acts_upstream_of_or_within |
ISO |
MGI:1857654|MGI:2136986 (MGI:3610441|PMID:16154126), (MGI:3701027|PMID:16854970) |
RGD |
PMID:16154126 PMID:16854970 |
MGI:3610441 MGI:3701027 |
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
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G |
Col8a1 |
collagen type VIII alpha 1 chain |
acts_upstream_of_or_within |
ISO |
MGI:88464 (MGI:3587134|PMID:16051690) |
RGD |
PMID:16051690 |
MGI:3587134 |
NCBI chr11:42,776,851...42,906,432
Ensembl chr11:42,777,628...42,906,424
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G |
Col8a2 |
collagen type VIII alpha 2 chain |
acts_upstream_of_or_within |
ISO |
MGI:88463 (MGI:3587134|PMID:16051690) |
RGD |
PMID:16051690 |
MGI:3587134 |
NCBI chr 5:138,586,201...138,613,627
Ensembl chr 5:138,585,999...138,612,850
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G |
Ephb1 |
Eph receptor B1 |
acts_upstream_of_or_within |
ISO |
MGI:2677305 (MGI:2675767|PMID:12971893) |
RGD |
PMID:12971893 |
MGI:2675767 |
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
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G |
Ephb2 |
Eph receptor B2 |
acts_upstream_of_or_within |
ISO |
MGI:2149765 (MGI:2675767|PMID:12971893) |
RGD |
PMID:12971893 |
MGI:2675767 |
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
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G |
Fat1 |
FAT atypical cadherin 1 |
involved_in |
ISO |
MGI:2662293 (MGI:5766588|PMID:26114487) |
RGD |
PMID:26114487 |
MGI:5766588 |
NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
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G |
Gdf11 |
growth differentiation factor 11 |
acts_upstream_of_or_within |
ISO |
MGI:2449673 (MGI:3581514|PMID:15976303) |
RGD |
PMID:15976303 |
MGI:3581514 |
NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
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G |
Gli3 |
GLI family zinc finger 3 |
acts_upstream_of_or_within |
ISO |
MGI:1856276 (MGI:52587|PMID:8387379) |
RGD |
PMID:8387379 |
MGI:52587 |
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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G |
Grcc10 |
gene rich cluster, C10 gene |
involved_in |
ISO |
(PMID:23453665), (PMID:23633300), (PMID:24798461) |
RGD |
PMID:23453665 PMID:23633300 PMID:24798461 |
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NCBI chr 4:157,551,276...157,552,924
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G |
Hif1a |
hypoxia inducible factor 1 subunit alpha |
acts_upstream_of_or_within |
ISO |
MGI:103223 (MGI:5429122|PMID:22627278) |
RGD |
PMID:22627278 |
MGI:5429122 |
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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G |
Ift122 |
intraflagellar transport 122 |
involved_in |
ISO |
(MGI:3827087|PMID:19000668) |
RGD |
PMID:19000668 |
MGI:3827087 |
NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458
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G |
Mfn2 |
mitofusin 2 |
acts_upstream_of_or_within |
ISO |
MGI:1861626 (MGI:3589043|PMID:16104381) |
RGD |
PMID:16104381 |
MGI:3589043 |
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
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G |
Nectin1 |
nectin cell adhesion molecule 1 |
acts_upstream_of_or_within |
ISO |
MGI:3605480 (MGI:3604842|PMID:15728677) |
RGD |
PMID:15728677 |
MGI:3604842 |
NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
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G |
Nf1 |
neurofibromin 1 |
involved_in acts_upstream_of_or_within |
ISS ISO IEA |
GO_REF:0000024 MGI:1857444 (MGI:66069|PMID:7926784) GO_REF:0000107 |
HGNC-UCL RGD Ensembl |
PMID:7926784 |
GO_REF:0000024 GO_REF:0000107 MGI:66069 |
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
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G |
Ring1 |
ring finger protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:99150 (MGI:3628673|PMID:16624538) |
RGD |
PMID:16624538 |
MGI:3628673 |
NCBI chr20:4,830,120...4,833,623
Ensembl chr20:4,830,053...4,833,620
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G |
Ski |
Ski proto-oncogene |
acts_upstream_of_or_within |
ISO |
MGI:2177555 (MGI:3693412|PMID:17003410) |
RGD |
PMID:17003410 |
MGI:3693412 |
NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
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G |
Tenm3 |
teneurin transmembrane protein 3 |
involved_in |
ISO |
(PMID:22766609) |
RGD |
PMID:22766609 |
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NCBI chr16:41,251,909...43,978,594
Ensembl chr16:41,252,182...43,978,594
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G |
Vegfa |
vascular endothelial growth factor A |
acts_upstream_of_or_within |
ISO |
MGI:1931048|MGI:2387296 (MGI:3607459|PMID:16251428) |
RGD |
PMID:16251428 |
MGI:3607459 |
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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G |
Vhl |
von Hippel-Lindau tumor suppressor |
acts_upstream_of_or_within |
ISO |
MGI:106918|MGI:2136645 (MGI:5429122|PMID:22627278) |
RGD |
PMID:22627278 |
MGI:5429122 |
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
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G |
Yy1 |
YY1 transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:1101770 (MGI:3628673|PMID:16624538) |
RGD |
PMID:16624538 |
MGI:3628673 |
NCBI chr 6:127,706,739...127,731,907
Ensembl chr 6:127,707,596...127,732,747
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G |
Dscam |
DS cell adhesion molecule |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
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G |
Prom1 |
prominin 1 |
involved_in |
IBA ISO |
PMID:21873635 (MGI:3838023|PMID:19228982) (PMID:18654668) |
RGD |
PMID:18654668 PMID:19228982 PMID:21873635 |
MGI:3838023, RGD:13792537 |
NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
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G |
Rom1 |
retinal outer segment membrane protein 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4437581|PMID:20300562) |
RGD |
PMID:20300562 |
MGI:4437581 |
NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175
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G |
Sdk2 |
sidekick cell adhesion molecule 2 |
involved_in |
ISO |
(MGI:5693671|PMID:26287463) |
RGD |
PMID:26287463 |
MGI:5693671 |
NCBI chr10:98,824,923...99,102,590
Ensembl chr10:98,828,348...99,101,759
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G |
Slc4a7 |
solute carrier family 4 member 7 |
acts_upstream_of_or_within |
ISO |
GO:0060219 (MGI:2680888|PMID:12808454) |
RGD |
PMID:12808454 |
MGI:2680888 |
NCBI chr15:10,585,307...10,664,781
Ensembl chr15:10,588,979...10,664,781
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G |
Ttc8 |
tetratricopeptide repeat domain 8 |
acts_upstream_of_or_within |
ISO |
MGI:5140723 (MGI:5014119|PMID:21646512) |
RGD |
PMID:21646512 |
MGI:5014119 |
NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
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G |
Ihh |
Indian hedgehog signaling molecule |
acts_upstream_of_or_within |
ISO |
MGI:1934258 (MGI:3807419|PMID:18582859) |
RGD |
PMID:18582859 |
MGI:3807419 |
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
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G |
Foxe3 |
forkhead box E3 |
involved_in |
ISS ISO |
PMID:17064680 (MGI:3703484|PMID:17064680) |
RGD |
PMID:17064680 PMID:17064680 |
MGI:3703484, RGD:10047226 |
NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454
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G |
Jag1 |
jagged canonical Notch ligand 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:3692444 (MGI:5492288|PMID:23676271) GO_REF:0000107 |
RGD Ensembl |
PMID:23676271 |
GO_REF:0000107 MGI:5492288 |
NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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G |
Notch2 |
notch receptor 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:3617328 (MGI:5492288|PMID:23676271) |
Ensembl RGD |
PMID:23676271 |
GO_REF:0000107 MGI:5492288 |
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
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G |
Tsku |
tsukushi, small leucine rich proteoglycan |
involved_in acts_upstream_of_or_within |
IEA ISO ISS |
GO_REF:0000107 (MGI:5285004|PMID:21856951) GO_REF:0000024 |
Ensembl RGD UniProt |
PMID:21856951 |
GO_REF:0000024 GO_REF:0000107 MGI:5285004 |
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
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G |
Vhl |
von Hippel-Lindau tumor suppressor |
acts_upstream_of_or_within |
ISO |
MGI:2136645 (MGI:5429122|PMID:22627278) |
RGD |
PMID:22627278 |
MGI:5429122 |
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
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G |
Phactr4 |
phosphatase and actin regulator 4 |
involved_in |
ISO |
(MGI:3719969|PMID:17609112) |
RGD |
PMID:17609112 |
MGI:3719969 |
NCBI chr 5:144,549,350...144,621,259
Ensembl chr 5:144,549,363...144,620,865
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G |
Sox11 |
SRY-box transcription factor 11 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3797299|PMID:18423449) |
UniProt RGD |
PMID:18423449 |
GO_REF:0000024 MGI:3797299 |
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
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G |
Naglu |
N-acetyl-alpha-glucosaminidase |
acts_upstream_of_or_within |
ISO |
MGI:1934018 (MGI:6219748|PMID:26607664) |
RGD |
PMID:26607664 |
MGI:6219748 |
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
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G |
Ndp |
norrin cystine knot growth factor NDP |
acts_upstream_of_or_within |
ISO |
MGI:2676199 (MGI:3655326|PMID:9071226) |
RGD |
PMID:9071226 |
MGI:3655326 |
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
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G |
Foxe3 |
forkhead box E3 |
involved_in |
ISS ISO |
PMID:17064680 (MGI:3703484|PMID:17064680) |
RGD |
PMID:17064680 PMID:17064680 |
MGI:3703484, RGD:10047226 |
NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454
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G |
Kera |
keratocan |
acts_upstream_of_or_within |
ISO |
UniProtKB:O60938 (MGI:1855733|PMID:10802664) |
RGD |
PMID:10802664 |
MGI:1855733 |
NCBI chr 7:32,397,382...32,404,837
Ensembl chr 7:32,397,382...32,404,837
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|
G |
Krt12 |
keratin 12 |
involved_in acts_upstream_of_or_within |
ISO ISS IEA |
(PMID:26758872) MGI:3051854 (MGI:85415|PMID:8977471) (MGI:5752087|PMID:26758872) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:8977471 PMID:26758872 |
GO_REF:0000024 GO_REF:0000107 MGI:5752087 MGI:85415 |
NCBI chr10:84,370,803...84,378,075
Ensembl chr10:84,370,883...84,378,045
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|
G |
Limk2 |
LIM domain kinase 2 |
acts_upstream_of_or_within |
ISO |
MGI:3612836 (MGI:5646594|PMID:26234751) |
RGD |
PMID:26234751 |
MGI:5646594 |
NCBI chr14:78,208,182...78,286,106
Ensembl chr14:78,218,063...78,286,007
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G |
Pax6 |
paired box 6 |
involved_in |
ISO IEA |
(PMID:7550230) GO_REF:0000107 |
RGD Ensembl |
PMID:7550230 |
GO_REF:0000107 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Prickle1 |
prickle planar cell polarity protein 1 |
involved_in |
ISO IEA |
MGI:5645931 (MGI:6117543|PMID:29450535) GO_REF:0000107 |
RGD Ensembl |
PMID:29450535 |
GO_REF:0000107 MGI:6117543 |
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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G |
Sox11 |
SRY-box transcription factor 11 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3797299|PMID:18423449) |
UniProt RGD |
PMID:18423449 |
GO_REF:0000024 MGI:3797299 |
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
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|
G |
Tfap2a |
transcription factor AP-2 alpha |
acts_upstream_of_or_within |
ISO |
MGI:2183192 (MGI:3610667|PMID:16186342) |
RGD |
PMID:16186342 |
MGI:3610667 |
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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G |
Twist2 |
twist family bHLH transcription factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3044412 (MGI:4949824|PMID:20574024) |
RGD |
PMID:20574024 |
MGI:4949824 |
NCBI chr 9:92,374,740...92,419,222
Ensembl chr 9:92,374,574...92,419,222
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G |
Aldh1a2 |
aldehyde dehydrogenase 1 family, member A2 |
acts_upstream_of_or_within |
ISO |
MGI:1861722 (MGI:3700411|PMID:17184764) |
RGD |
PMID:17184764 |
MGI:3700411 |
NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107
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G |
Aldh1a3 |
aldehyde dehydrogenase 1 family, member A3 |
involved_in acts_upstream_of_or_within |
ISO |
(MGI:3042765|PMID:14623956) MGI:107928 (MGI:3700411|PMID:17184764) |
RGD |
PMID:14623956 PMID:17184764 |
MGI:3042765 MGI:3700411 |
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
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G |
Cdk20 |
cyclin-dependent kinase 20 |
acts_upstream_of_or_within |
ISO |
MGI:6113512 (MGI:5912686|PMID:28817564) |
RGD |
PMID:28817564 |
MGI:5912686 |
NCBI chr17:701,122...707,869
Ensembl chr17:701,124...707,826
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|
G |
Fgf10 |
fibroblast growth factor 10 |
acts_upstream_of_or_within |
ISO |
MGI:1859647 (MGI:3588480|PMID:15958512) |
RGD |
PMID:15958512 |
MGI:3588480 |
NCBI chr 2:50,801,897...50,875,428
Ensembl chr 2:50,800,992...50,876,866
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G |
Fzd5 |
frizzled class receptor 5 |
acts_upstream_of_or_within |
ISO |
MGI:3574771|MGI:3583769 (MGI:3821812|PMID:18791178) |
RGD |
PMID:18791178 |
MGI:3821812 |
NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
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|
G |
Ift140 |
intraflagellar transport 140 |
acts_upstream_of_or_within |
ISO |
MGI:4458412 (MGI:5505384|PMID:23469164) |
RGD |
PMID:23469164 |
MGI:5505384 |
NCBI chr10:14,032,665...14,121,682
Ensembl chr10:14,032,648...14,120,433
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G |
Nes |
nestin |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr 2:173,437,867...173,447,777
Ensembl chr 2:173,438,734...173,447,777
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G |
Pitx2 |
paired-like homeodomain 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857844|MGI:1857846|MGI:1857880 (MGI:1344731|PMID:10498698), (MGI:1347482|PMID:10572050) |
RGD |
PMID:10498698 PMID:10572050 |
MGI:1344731 MGI:1347482 |
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
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G |
Ppp1r13l |
protein phosphatase 1, regulatory subunit 13 like |
acts_upstream_of_or_within |
ISO |
MGI:3575541 (MGI:3530389|PMID:15661756) |
RGD |
PMID:15661756 |
MGI:3530389 |
NCBI chr 1:79,010,997...79,030,714
Ensembl chr 1:79,011,745...79,030,712
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G |
Rara |
retinoic acid receptor, alpha |
acts_upstream_of_or_within |
ISO |
MGI:97858 (MGI:69060|PMID:7607067) |
RGD |
PMID:7607067 |
MGI:69060 |
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
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G |
Rarg |
retinoic acid receptor, gamma |
acts_upstream_of_or_within |
ISO |
MGI:97856 (MGI:69060|PMID:7607067) |
RGD |
PMID:7607067 |
MGI:69060 |
NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
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|
G |
Rdh10 |
retinol dehydrogenase 10 |
acts_upstream_of_or_within |
ISO |
(MGI:3709664|PMID:17473173) |
RGD |
PMID:17473173 |
MGI:3709664 |
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
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|
G |
Traf3ip1 |
TRAF3 interacting protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:4129326 (MGI:5298450|PMID:21945076) |
RGD |
PMID:21945076 |
MGI:5298450 |
NCBI chr 9:92,073,622...92,110,427
Ensembl chr 9:92,073,640...92,108,977
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G |
Tulp3 |
TUB like protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:2388066 (MGI:3841503|PMID:19286674) |
RGD |
PMID:19286674 |
MGI:3841503 |
NCBI chr 4:161,590,478...161,632,514
Ensembl chr 4:161,590,479...161,632,149
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|
G |
Wdr19 |
WD repeat domain 19 |
acts_upstream_of_or_within |
ISO |
MGI:5315747 (MGI:5314316|PMID:22228095) |
RGD |
PMID:22228095 |
MGI:5314316 |
NCBI chr14:43,042,474...43,106,337
Ensembl chr14:43,042,478...43,106,288
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G |
Stra6 |
signaling receptor and transporter of retinol STRA6 |
involved_in |
ISO |
(PMID:17273977) |
RGD |
PMID:17273977 |
|
NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860
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G |
Twist1 |
twist family bHLH transcription factor 1 |
involved_in |
ISO |
(PMID:17070479) |
RGD |
PMID:17070479 |
|
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
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|
|
G |
AABR07063281.1 |
|
involved_in |
IEA |
GO_REF:0000107 |
Ensembl |
|
GO_REF:0000107 |
|
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G |
Bmp7 |
bone morphogenetic protein 7 |
acts_upstream_of_or_within |
ISO |
MGI:1857654 (MGI:1332362|PMID:10049573) |
RGD |
PMID:10049573 |
MGI:1332362 |
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
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G |
Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
acts_upstream_of_or_within |
ISO |
MGI:97490 (MGI:3807101|PMID:18653562) |
RGD |
PMID:18653562 |
MGI:3807101 |
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
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|
G |
Cryaa |
crystallin, alpha A |
acts_upstream_of_or_within |
ISO |
MGI:3777403 (MGI:3775669|PMID:18056999) |
RGD |
PMID:18056999 |
MGI:3775669 |
NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349
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G |
Foxf2 |
forkhead box F2 |
involved_in |
ISO |
(MGI:5297296|PMID:22022403) |
RGD |
PMID:22022403 |
MGI:5297296 |
NCBI chr17:32,835,730...32,842,555
Ensembl chr17:32,836,777...32,842,176
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G |
Fzd5 |
frizzled class receptor 5 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:3826935|PMID:18832390) |
Ensembl RGD |
PMID:18832390 |
GO_REF:0000107 MGI:3826935 |
NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
|
|
G |
Hipk1 |
homeodomain interacting protein kinase 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:4818711|PMID:20579985) |
Ensembl RGD |
PMID:20579985 |
GO_REF:0000107 MGI:4818711 |
NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902
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|
G |
Hipk2 |
homeodomain interacting protein kinase 2 |
involved_in |
ISO |
(MGI:4818711|PMID:20579985) |
RGD |
PMID:20579985 |
MGI:4818711 |
NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
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|
G |
Ift122 |
intraflagellar transport 122 |
acts_upstream_of_or_within |
ISO |
MGI:3578529 (MGI:6094959|PMID:28778798) |
RGD |
PMID:28778798 |
MGI:6094959 |
NCBI chr 4:148,905,031...148,975,458
Ensembl chr 4:148,905,046...148,975,458
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|
G |
Ift172 |
intraflagellar transport 172 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2682066 (MGI:6094959|PMID:28778798) GO_REF:0000107 |
RGD Ensembl |
PMID:28778798 |
GO_REF:0000107 MGI:6094959 |
NCBI chr 6:25,081,933...25,121,271
Ensembl chr 6:25,081,980...25,120,860
|
|
G |
Ihh |
Indian hedgehog signaling molecule |
acts_upstream_of_or_within |
ISO |
MGI:1934258 (MGI:3807419|PMID:18582859) |
RGD |
PMID:18582859 |
MGI:3807419 |
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
|
|
G |
Kdm2b |
lysine demethylase 2B |
involved_in |
ISO |
(MGI:4949568|PMID:21220025) |
RGD |
PMID:21220025 |
MGI:4949568 |
NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355
|
|
G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:2156191|MGI:4415718 (MGI:3823171|PMID:18985738), (MGI:4413396|PMID:19653321) |
RGD |
PMID:18985738 PMID:19653321 |
MGI:3823171 MGI:4413396 |
NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
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G |
Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1306784 (MGI:3807101|PMID:18653562) |
Ensembl RGD |
PMID:18653562 |
GO_REF:0000107 MGI:3807101 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
|
|
G |
Sp1 |
Sp1 transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:1277166 (MGI:3717030|PMID:17584888) |
RGD |
PMID:17584888 |
MGI:3717030 |
NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
|
|
G |
Sp3 |
Sp3 transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:98372 (MGI:3717030|PMID:17584888) |
RGD |
PMID:17584888 |
MGI:3717030 |
NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342
|
|
G |
Tbx2 |
T-box transcription factor 2 |
involved_in |
ISO |
(MGI:3487212|PMID:15459098) |
RGD |
PMID:15459098 |
MGI:3487212 |
NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
|
|
G |
Tfap2a |
transcription factor AP-2 alpha |
acts_upstream_of_or_within |
ISO |
MGI:2176682 (MGI:1313057|PMID:9811866) |
RGD |
PMID:9811866 |
MGI:1313057 |
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
|
|
G |
Th |
tyrosine hydroxylase |
involved_in |
ISO |
(MGI:3617102|PMID:16445854) |
RGD |
PMID:16445854 |
MGI:3617102 |
NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
|
|
G |
Zeb1 |
zinc finger E-box binding homeobox 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857515 (MGI:3790562|PMID:18436818) |
Ensembl RGD |
PMID:18436818 |
GO_REF:0000107 MGI:3790562 |
NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
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|
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G |
Aldh1a1 |
aldehyde dehydrogenase 1 family, member A1 |
acts_upstream_of_or_within |
ISO |
MGI:1861722 (MGI:3608158|PMID:16207763), (MGI:3624188|PMID:16611695) |
RGD |
PMID:16207763 PMID:16611695 |
MGI:3608158 MGI:3624188 |
NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
|
|
G |
Aldh1a3 |
aldehyde dehydrogenase 1 family, member A3 |
acts_upstream_of_or_within |
ISO |
MGI:1353450|MGI:3043947 (MGI:3608158|PMID:16207763), (MGI:3624188|PMID:16611695) |
RGD |
PMID:16207763 PMID:16611695 |
MGI:3608158 MGI:3624188 |
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
|
|
G |
Efemp1 |
EGF containing fibulin extracellular matrix protein 1 |
involved_in |
ISO |
(PMID:25406291) |
RGD |
PMID:25406291 |
|
NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018
|
|
G |
Fbn1 |
fibrillin 1 |
involved_in |
ISO |
(PMID:25406291) |
RGD |
PMID:25406291 |
|
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
|
|
G |
Fbn2 |
fibrillin 2 |
involved_in |
ISO |
(PMID:25406291) |
RGD |
PMID:25406291 |
|
NCBI chr18:51,499,737...51,703,976
Ensembl chr18:51,499,737...51,703,976
|
|
G |
Foxl2 |
forkhead box L2 |
acts_upstream_of_or_within |
ISO |
MGI:3044226 (MGI:3043431|PMID:15056605) |
RGD |
PMID:15056605 |
MGI:3043431 |
NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427
|
|
G |
Mfap2 |
microfibril associated protein 2 |
involved_in |
IBA ISO |
PMID:21873635 (PMID:25406291) |
RGD |
PMID:25406291 PMID:21873635 |
RGD:13792537 |
NCBI chr 5:153,312,068...153,320,266
Ensembl chr 5:153,314,711...153,320,259
|
|
G |
Mfap5 |
microfibril associated protein 5 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:155,727,925...155,750,458
Ensembl chr 4:155,727,925...155,750,458
|
|
G |
Rarb |
retinoic acid receptor, beta |
acts_upstream_of_or_within |
ISO |
MGI:97858 (MGI:3608158|PMID:16207763) |
RGD |
PMID:16207763 |
MGI:3608158 |
NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
|
|
G |
Rarg |
retinoic acid receptor, gamma |
acts_upstream_of_or_within |
ISO |
MGI:97857 (MGI:3608158|PMID:16207763) |
RGD |
PMID:16207763 |
MGI:3608158 |
NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
|
|
G |
Vax2 |
ventral anterior homeobox 2 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2159246 (MGI:1349226|PMID:10595508), (MGI:2157790|PMID:11830579) GO_REF:0000107 |
RGD Ensembl |
PMID:10595508 PMID:11830579 |
GO_REF:0000107 MGI:1349226 MGI:2157790 |
NCBI chr 4:116,195,576...116,219,597
Ensembl chr 4:116,195,528...116,219,594
|
|
|
G |
Cdon |
cell adhesion associated, oncogene regulated |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2653120 (MGI:4422144|PMID:19754878) |
Ensembl RGD |
PMID:19754878 |
GO_REF:0000107 MGI:4422144 |
NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
|
|
G |
Hipk1 |
homeodomain interacting protein kinase 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:4818711|PMID:20579985) |
Ensembl RGD |
PMID:20579985 |
GO_REF:0000107 MGI:4818711 |
NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902
|
|
G |
Hipk2 |
homeodomain interacting protein kinase 2 |
involved_in |
ISO |
(MGI:4818711|PMID:20579985) |
RGD |
PMID:20579985 |
MGI:4818711 |
NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
|
|
G |
Lhx1 |
LIM homeobox 1 |
involved_in |
ISO ISS |
(MGI:3772525|PMID:18094249) GO_REF:0000024 |
RGD UniProt |
PMID:18094249 |
GO_REF:0000024 MGI:3772525 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
|
|
G |
Lrp6 |
LDL receptor related protein 6 |
acts_upstream_of_or_within |
ISO |
MGI:4415718 (MGI:4413396|PMID:19653321) |
RGD |
PMID:19653321 |
MGI:4413396 |
NCBI chr 4:167,266,581...167,400,155
Ensembl chr 4:167,270,353...167,400,497
|
|
G |
Prox1 |
prospero homeobox 1 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:12692551) (MGI:2658694|PMID:12692551) |
RGD |
PMID:12692551 |
MGI:2658694 |
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
|
|
G |
Rbp4 |
retinol binding protein 4 |
involved_in |
ISO |
(MGI:1344892|PMID:10469643) |
RGD |
PMID:10469643 |
MGI:1344892 |
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
|
|
|
G |
Fat1 |
FAT atypical cadherin 1 |
involved_in |
ISO |
MGI:2662293 (MGI:5766588|PMID:26114487) |
RGD |
PMID:26114487 |
MGI:5766588 |
NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
|
|
|
G |
Cacna1s |
calcium voltage-gated channel subunit alpha1 S |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:1856326 (MGI:3613415|PMID:14618389) GO_REF:0000107 |
RGD Ensembl |
PMID:14618389 |
GO_REF:0000107 MGI:3613415 |
NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318
|
|
G |
Foxl2 |
forkhead box L2 |
involved_in |
ISO |
(PMID:12630957) |
RGD |
PMID:12630957 |
|
NCBI chr 8:99,512,971...99,514,500
Ensembl chr 8:99,513,303...99,514,427
|
|
G |
Myh15 |
myosin, heavy chain 15 |
|
IEP |
|
RGD |
PMID:19948655 |
RGD:2317122 |
NCBI chr11:51,621,924...51,763,037
Ensembl chr11:51,622,413...51,762,971
|
|
G |
Myom1 |
myomesin 1 |
|
IEP |
|
RGD |
PMID:12878677 |
RGD:633368 |
NCBI chr 9:110,916,156...111,039,344
Ensembl chr 9:110,915,943...111,039,344
|
|
G |
Myom2 |
myomesin 2 |
|
IEP |
|
RGD |
PMID:12878677 |
RGD:633368 |
NCBI chr16:74,520,148...74,592,658
Ensembl chr16:74,520,157...74,592,772
|
|
G |
Pitx2 |
paired-like homeodomain 2 |
acts_upstream_of_or_within |
ISO |
MGI:1857844|MGI:1857846 (MGI:3624183|PMID:16638982), (MGI:4881620|PMID:21035439) |
RGD |
PMID:16638982 PMID:21035439 |
MGI:3624183 MGI:4881620 |
NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
|
|
|
G |
Abcb5 |
ATP binding cassette subfamily B member 5 |
involved_in |
ISO |
(MGI:5585659|PMID:25030174) |
RGD |
PMID:25030174 |
MGI:5585659 |
NCBI chr 6:139,836,528...139,932,830
Ensembl chr 6:139,835,949...139,932,830
|
|
G |
Adamts18 |
ADAM metallopeptidase with thrombospondin type 1 motif, 18 |
involved_in |
ISO |
(PMID:23818446) |
RGD |
PMID:23818446 |
|
NCBI chr19:41,686,951...41,840,035
Ensembl chr19:41,688,617...41,839,781
|
|
G |
Atf6 |
activating transcription factor 6 |
involved_in |
ISO |
(PMID:26029869) |
RGD |
PMID:26029869 |
|
NCBI chr13:82,927,579...83,106,381
Ensembl chr13:82,930,034...83,107,177
|
|
G |
Bbs7 |
Bardet-Biedl syndrome 7 |
acts_upstream_of_or_within |
ISO |
MGI:98715 (MGI:5314314|PMID:22228099) |
RGD |
PMID:22228099 |
MGI:5314314 |
NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396
|
|
G |
Bloc1s3 |
biogenesis of lysosomal organelles complex-1, subunit 3 |
involved_in |
ISO |
(PMID:16385460) |
RGD |
PMID:16385460 |
|
NCBI chr 1:79,155,914...79,158,326
Ensembl chr 1:79,155,693...79,158,505
|
|
G |
Bmp4 |
bone morphogenetic protein 4 |
NOT|involved_in |
ISO |
UniProtKB:P23359 (MGI:3610441|PMID:16154126) |
RGD |
PMID:16154126 |
MGI:3610441 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
|
|
G |
Bmp6 |
bone morphogenetic protein 6 |
involved_in |
ISO |
UniProtKB:P23359 (MGI:3610441|PMID:16154126) |
RGD |
PMID:16154126 |
MGI:3610441 |
NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
|
|
G |
Bmp7 |
bone morphogenetic protein 7 |
involved_in |
ISO |
(MGI:3610441|PMID:16154126) |
RGD |
PMID:16154126 |
MGI:3610441 |
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
|
|
G |
Bmpr1b |
bone morphogenetic protein receptor type 1B |
acts_upstream_of_or_within |
ISO |
(MGI:2181740|PMID:12117821) |
RGD |
PMID:12117821 |
MGI:2181740 |
NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
|
|
G |
Chrdl1 |
chordin-like 1 |
involved_in |
ISO ISS IEA |
(PMID:22284829) GO_REF:0000024 GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:22284829 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr X:106,889,125...106,992,937
Ensembl chr X:106,889,125...106,992,921
|
|
G |
Cpamd8 |
C3 and PZP-like, alpha-2-macroglobulin domain containing 8 |
involved_in |
ISO |
(PMID:27839872) |
RGD |
PMID:27839872 |
|
NCBI chr 4:155,332,827...155,413,098
Ensembl chr 4:155,332,827...155,413,117
|
|
G |
Cryga |
crystallin, gamma A |
acts_upstream_of_or_within |
ISO |
MGI:1857595 (MGI:3042503|PMID:15037589) |
RGD |
PMID:15037589 |
MGI:3042503 |
NCBI chr 9:66,482,176...66,512,873
Ensembl chr 9:66,482,176...66,509,896
|
|
G |
Crygb |
crystallin, gamma B |
acts_upstream_of_or_within |
ISO |
MGI:1857597 (MGI:3042503|PMID:15037589) |
RGD |
PMID:15037589 |
MGI:3042503 |
NCBI chr 9:66,461,460...66,463,520
Ensembl chr 9:66,461,460...66,463,520
|
|
G |
Crygc |
crystallin, gamma C |
acts_upstream_of_or_within |
ISO |
MGI:2176919 (MGI:3042503|PMID:15037589) |
RGD |
PMID:15037589 |
MGI:3042503 |
NCBI chr 9:66,451,591...66,453,626
Ensembl chr 9:66,451,593...66,453,626
|
|
G |
Crygd |
crystallin, gamma D |
acts_upstream_of_or_within |
ISO |
MGI:2387106 (MGI:3042503|PMID:15037589) |
RGD |
PMID:15037589 |
MGI:3042503 |
NCBI chr 9:66,442,054...66,443,668
Ensembl chr 9:66,442,054...66,444,067
|
|
G |
Cst3 |
cystatin C |
|
IEP |
|
RGD |
PMID:11431459 |
RGD:2306512 |
NCBI chr 3:136,336,923...136,340,796
Ensembl chr 3:136,336,920...136,340,822
|
|
G |
Fgf9 |
fibroblast growth factor 9 |
involved_in |
ISO |
(MGI:5291533|PMID:21858205) |
RGD |
PMID:21858205 |
MGI:5291533 |
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
|
|
G |
Foxc1 |
forkhead box C1 |
acts_upstream_of_or_within |
ISO |
MGI:1856705|MGI:1857869 (MGI:1261705|PMID:9635428), (MGI:1335260|PMID:10072431) (PMID:9792859) |
RGD |
PMID:9635428 PMID:9792859 PMID:10072431 |
MGI:1261705 MGI:1335260 |
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
|
|
G |
Foxe3 |
forkhead box E3 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:1856851 (MGI:1352262|PMID:10652278) (PMID:27218149) |
UniProt RGD |
PMID:10652278 PMID:27218149 |
GO_REF:0000024 MGI:1352262 |
NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454
|
|
G |
Frem2 |
FRAS1 related extracellular matrix 2 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:29688405), (PMID:30802441) (MGI:6368066|PMID:30802441) MGI:3794302 (MGI:5646594|PMID:26234751) |
RGD |
PMID:26234751 PMID:29688405 PMID:30802441 |
MGI:5646594 MGI:6368066 |
NCBI chr 2:137,602,784...137,740,785
Ensembl chr 2:137,602,784...137,740,785
|
|
G |
Gdf3 |
growth differentiation factor 3 |
involved_in |
ISO |
(PMID:19864492) |
RGD |
PMID:19864492 |
|
NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937
|
|
G |
Hmgb1 |
high mobility group box 1 |
acts_upstream_of_or_within |
ISO |
MGI:3530901 (MGI:1339514|PMID:10391216) |
RGD |
PMID:10391216 |
MGI:1339514 |
NCBI chr12:5,973,062...5,978,565
Ensembl chr12:5,901,586...5,978,565
|
|
G |
Hsf4 |
heat shock transcription factor 4 |
acts_upstream_of_or_within |
ISO |
MGI:3056560 (MGI:3056236|PMID:15343150) |
RGD |
PMID:15343150 |
MGI:3056236 |
NCBI chr19:33,147,755...33,153,479
Ensembl chr19:33,147,755...33,153,479
|
|
G |
Ift88 |
intraflagellar transport 88 |
acts_upstream_of_or_within |
ISO |
MGI:1918742 (MGI:5314314|PMID:22228099) |
RGD |
PMID:22228099 |
MGI:5314314 |
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
|
|
G |
Mab21l1 |
mab-21 like 1 |
involved_in |
ISO |
(PMID:27103078), (PMID:30487245) |
RGD |
PMID:27103078 PMID:30487245 |
|
NCBI chr 2:139,943,496...139,945,885
Ensembl chr 2:139,943,496...139,945,885
|
|
G |
Mab21l2 |
mab-21 like 2 |
involved_in |
ISO |
(PMID:24906020), (PMID:25719200) |
RGD |
PMID:24906020 PMID:25719200 |
|
NCBI chr 2:171,946,573...171,949,655
Ensembl chr 2:171,946,573...171,949,655
|
|
G |
Meis1 |
Meis homeobox 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265
|
|
G |
Meis2 |
Meis homeobox 2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:97490 (MGI:2384485|PMID:12183364) |
RGD |
PMID:12183364 PMID:21873635 |
MGI:2384485, RGD:13792537 |
NCBI chr 3:102,742,905...102,944,833
Ensembl chr 3:102,742,900...102,949,696
|
|
G |
Meis3 |
Meis homeobox 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 1:76,861,267...76,872,691
Ensembl chr 1:76,861,924...76,872,691
|
|
G |
Mug2 |
murinoglobulin 2 |
involved_in |
ISO |
(PMID:27839872) |
RGD |
PMID:27839872 |
|
NCBI chr 4:155,164,061...155,236,765
Ensembl chr 4:155,164,011...155,236,475
|
|
G |
Pbx1 |
PBX homeobox 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
|
|
G |
Pbx2 |
PBX homeobox 2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr20:4,151,500...4,156,425
Ensembl chr20:4,151,500...4,156,425
|
|
G |
Pbx3 |
PBX homeobox 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:17,488,691...17,682,412
Ensembl chr 3:17,488,693...17,682,791
|
|
G |
Pbx4 |
PBX homeobox 4 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr16:19,555,089...19,590,054
Ensembl chr16:19,555,090...19,590,014
|
|
G |
Pxdn |
peroxidasin |
involved_in |
ISO |
(MGI:6400066|PMID:31817535) |
RGD |
PMID:31817535 |
MGI:6400066 |
NCBI chr 6:46,580,749...46,658,345
Ensembl chr 6:46,580,761...46,658,345
|
|
G |
Rab18 |
RAB18, member RAS oncogene family |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
|
GO_REF:0000024 |
NCBI chr17:54,944,099...54,976,093
Ensembl chr17:54,943,955...54,976,043
|
|
G |
Rbp4 |
retinol binding protein 4 |
involved_in |
ISO |
(PMID:10232633) (MGI:3604178|PMID:15994349) |
RGD |
PMID:10232633 PMID:15994349 |
MGI:3604178 |
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
|
|
G |
Sall2 |
spalt-like transcription factor 2 |
involved_in |
ISO |
(PMID:24412933) |
RGD |
PMID:24412933 |
|
NCBI chr15:25,021,345...25,038,918
Ensembl chr15:25,021,345...25,038,918
|
|
G |
Sh3pxd2b |
SH3 and PX domains 2B |
involved_in |
ISO |
(PMID:20137777) (MGI:4439252|PMID:20137777) |
RGD |
PMID:20137777 |
MGI:4439252 |
NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170
|
|
G |
Sipa1l3 |
signal-induced proliferation-associated 1 like 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5697095|PMID:26231217) |
UniProt RGD |
PMID:26231217 |
GO_REF:0000024 MGI:5697095 |
NCBI chr 1:84,618,714...84,825,956
Ensembl chr 1:84,618,719...84,703,802
|
|
G |
Six3 |
SIX homeobox 3 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:2182264|PMID:12050133) (PMID:18791198) |
RGD |
PMID:12050133 PMID:18791198 PMID:21873635 |
MGI:2182264, RGD:13792537 |
NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
|
|
G |
Six6 |
SIX homeobox 6 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 6:91,634,568...91,639,548
Ensembl chr 6:91,634,568...91,639,548
|
|
G |
Slc39a5 |
solute carrier family 39 member 5 |
involved_in |
ISO |
(PMID:24891338) |
RGD |
PMID:24891338 |
|
NCBI chr 7:822,873...830,865
Ensembl chr 7:824,818...830,242
|
|
G |
Smg9 |
SMG9 nonsense mediated mRNA decay factor |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5775676|PMID:27018474) |
UniProt RGD |
PMID:27018474 |
GO_REF:0000024 MGI:5775676 |
NCBI chr 1:79,988,540...80,011,262
Ensembl chr 1:79,988,612...80,011,254
|
|
G |
Smoc1 |
SPARC related modular calcium binding 1 |
involved_in |
ISO |
(PMID:21194678) (MGI:4939981|PMID:21194678) |
RGD |
PMID:21194678 |
MGI:4939981 |
NCBI chr 6:100,701,330...100,897,441
Ensembl chr 6:100,701,346...100,862,699
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G |
Sox2 |
SRY-box transcription factor 2 |
involved_in |
ISO |
(PMID:18285410) |
RGD |
PMID:18285410 |
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NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
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G |
Tgfb2 |
transforming growth factor, beta 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:15944186) |
UniProt RGD |
PMID:15944186 |
GO_REF:0000024 |
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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G |
Zdhhc16 |
zinc finger DHHC-type palmitoyltransferase 16 |
involved_in |
ISO |
(MGI:5706675|PMID:26644582) |
RGD |
PMID:26644582 |
MGI:5706675 |
NCBI chr 1:240,745,606...240,757,009
Ensembl chr 1:240,745,641...240,757,009
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G |
Col5a1 |
collagen type V alpha 1 chain |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:16431952) |
Ensembl RGD |
PMID:16431952 |
GO_REF:0000107 |
NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
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G |
Col5a2 |
collagen type V alpha 2 chain |
involved_in |
ISO |
(PMID:16431952) |
RGD |
PMID:16431952 |
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NCBI chr 9:47,448,736...47,598,396
Ensembl chr 9:47,448,736...47,598,154
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G |
Gas1 |
growth arrest-specific 1 |
acts_upstream_of_or_within |
ISO |
MGI:2388397 (MGI:2138055|PMID:11456441) |
RGD |
PMID:11456441 |
MGI:2138055 |
NCBI chr17:4,482,014...4,485,155
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G |
Nipbl |
NIPBL, cohesin loading factor |
involved_in |
ISO |
(PMID:8291537) |
RGD |
PMID:8291537 |
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NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899
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G |
Stau2 |
staufen double-stranded RNA binding protein 2 |
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IMP |
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RGD |
PMID:22940085 |
RGD:10043154 |
NCBI chr 5:2,840,801...3,084,451
Ensembl chr 5:2,840,765...3,084,929
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G |
Ahi1 |
Abelson helper integration site 1 |
involved_in |
ISO |
(MGI:4437526|PMID:20081859) |
RGD |
PMID:20081859 |
MGI:4437526 |
NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041
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G |
Crb1 |
crumbs cell polarity complex component 1 |
acts_upstream_of_or_within |
ISO |
MGI:2676366 (MGI:2675211|PMID:12915475), (MGI:4849309|PMID:21052544) |
RGD |
PMID:12915475 PMID:21052544 |
MGI:2675211 MGI:4849309 |
NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
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G |
Dzank1 |
double zinc ribbon and ankyrin repeat domains 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 3:131,855,890...131,908,217
Ensembl chr 3:131,852,552...131,908,156
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G |
Fscn2 |
fascin actin-bundling protein 2, retinal |
acts_upstream_of_or_within |
ISO |
MGI:3612338 (MGI:3610644|PMID:16043865) |
RGD |
PMID:16043865 |
MGI:3610644 |
NCBI chr10:105,634,783...105,641,322
Ensembl chr10:105,634,783...105,641,322
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G |
Gabrr2 |
gamma-aminobutyric acid type A receptor subunit rho 2 |
NOT|acts_upstream_of_or_within |
ISO |
MGI:2446461 (MGI:2179933|PMID:12019334) |
RGD |
PMID:12019334 |
MGI:2179933 |
NCBI chr 5:47,445,280...47,489,929
Ensembl chr 5:47,452,150...47,489,809
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G |
Gnat1 |
G protein subunit alpha transducin 1 |
acts_upstream_of_or_within |
ISO |
MGI:2152779 (MGI:3609280|PMID:16249514) |
RGD |
PMID:16249514 |
MGI:3609280 |
NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
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G |
Gngt1 |
G protein subunit gamma transducin 1 |
acts_upstream_of_or_within |
ISO |
MGI:3783323 (MGI:3778702|PMID:18367617) |
RGD |
PMID:18367617 |
MGI:3778702 |
NCBI chr 4:32,006,267...32,009,252
Ensembl chr 4:32,006,267...32,009,252
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G |
Mfrp |
membrane frizzled-related protein |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 8:44,445,636...44,450,859
Ensembl chr 8:44,445,697...44,450,859
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G |
Nr2e3 |
nuclear receptor subfamily 2, group E, member 3 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 8:60,365,581...60,373,383
Ensembl chr 8:60,366,124...60,373,163
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G |
Olfm3 |
olfactomedin 3 |
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IDA |
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RGD |
PMID:12019210 |
RGD:633402 |
NCBI chr 2:202,729,610...202,952,120
Ensembl chr 2:202,729,936...202,952,112
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G |
Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1856158 (MGI:2654287|PMID:12648492) |
Ensembl RGD |
PMID:12648492 |
GO_REF:0000107 MGI:2654287 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Pdgfb |
platelet derived growth factor subunit B |
acts_upstream_of_or_within |
ISO |
MGI:2670574 (MGI:5607451|PMID:25224828) |
RGD |
PMID:25224828 |
MGI:5607451 |
NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
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G |
Prdm1 |
PR/SET domain 1 |
acts_upstream_of_or_within |
ISO |
MGI:3605621|MGI:3608904|MGI:4881674 (MGI:4454584|PMID:20463215) |
RGD |
PMID:20463215 |
MGI:4454584 |
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
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G |
Prkci |
protein kinase C, iota |
acts_upstream_of_or_within |
ISO |
MGI:3526850|MGI:3608904 (MGI:3607414|PMID:16267237) |
RGD |
PMID:16267237 |
MGI:3607414 |
NCBI chr 2:112,321,919...112,382,305
Ensembl chr 2:112,321,929...112,382,352
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G |
Psen1 |
presenilin 1 |
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NAS |
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RGD |
PMID:12736250 |
RGD:724403 |
NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
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G |
Rbp3 |
retinol binding protein 3 |
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NAS |
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RGD |
PMID:7916695 |
RGD:633871 |
NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006
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G |
Rdh13 |
retinol dehydrogenase 13 |
acts_upstream_of_or_within |
ISO |
MGI:5467544 (MGI:5462166|PMID:22605914) |
RGD |
PMID:22605914 |
MGI:5462166 |
NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908
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G |
Rorb |
RAR-related orphan receptor B |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3652638|PMID:16574740) |
UniProt RGD |
PMID:16574740 |
GO_REF:0000024 MGI:3652638 |
NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390
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G |
Rpgr |
retinitis pigmentosa GTPase regulator |
acts_upstream_of_or_within |
ISO |
MGI:2386674 (MGI:2654998|PMID:12651948) |
RGD |
PMID:12651948 |
MGI:2654998 |
NCBI chr X:12,566,447...12,628,171
Ensembl chr X:12,566,645...12,747,882
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G |
Rpgrip1 |
RPGR interacting protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:2655714 (MGI:2654998|PMID:12651948) |
RGD |
PMID:12651948 |
MGI:2654998 |
NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605
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G |
Th |
tyrosine hydroxylase |
involved_in |
ISO |
(MGI:3617102|PMID:16445854) |
RGD |
PMID:16445854 |
MGI:3617102 |
NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
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G |
Tulp1 |
TUB like protein 1 |
involved_in |
ISO |
(MGI:4397555|PMID:19218615) |
RGD |
PMID:19218615 |
MGI:4397555 |
NCBI chr20:6,412,170...6,424,312
Ensembl chr20:6,412,171...6,424,073
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G |
Vegfa |
vascular endothelial growth factor A |
acts_upstream_of_or_within |
ISO |
MGI:1931048|MGI:2387296 (MGI:3607459|PMID:16251428) |
RGD |
PMID:16251428 |
MGI:3607459 |
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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G |
Agtpbp1 |
ATP/GTP binding carboxypeptidase 1 |
involved_in |
ISO |
(MGI:3614720|PMID:16465590) |
RGD |
PMID:16465590 |
MGI:3614720 |
NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
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G |
Ppp2r3a |
protein phosphatase 2, regulatory subunit B'', alpha |
involved_in |
ISO |
UniProtKB:A0A803JG39 (PMID:15687260) |
RGD |
PMID:15687260 |
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NCBI chr 8:101,703,512...101,841,530
Ensembl chr 8:101,704,778...101,841,502
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G |
Stat3 |
signal transducer and activator of transcription 3 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 (MGI:3045481|PMID:15207851) |
UniProt RGD |
PMID:15207851 |
GO_REF:0000024 MGI:3045481 |
NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
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G |
Otx2 |
orthodenticle homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2178753 (MGI:2680889|PMID:14625556) |
RGD |
PMID:14625556 |
MGI:2680889 |
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
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|
G |
Egfr |
epidermal growth factor receptor |
acts_upstream_of_or_within |
ISO |
MGI:98354 (MGI:85697|PMID:9030684) |
RGD |
PMID:9030684 |
MGI:85697 |
NCBI chr14:91,176,931...91,349,722
Ensembl chr14:91,177,067...91,344,382
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G |
Grhl3 |
grainyhead-like transcription factor 3 |
acts_upstream_of_or_within |
ISO |
MGI:1856837 (MGI:4947318|PMID:21262862) |
RGD |
PMID:21262862 |
MGI:4947318 |
NCBI chr 5:147,774,160...147,806,338
Ensembl chr 5:147,774,160...147,806,160
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G |
Hdac1 |
histone deacetylase 1 |
involved_in |
ISO |
UniProtKB:P70288 (MGI:4889029|PMID:21093383) |
RGD |
PMID:21093383 |
MGI:4889029 |
NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
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G |
Hdac2 |
histone deacetylase 2 |
involved_in |
ISO |
UniProtKB:O09106 (MGI:4889029|PMID:21093383) |
RGD |
PMID:21093383 |
MGI:4889029 |
NCBI chr20:40,548,250...40,571,609
Ensembl chr20:40,548,250...40,571,609
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G |
Inhba |
inhibin subunit beta A |
involved_in |
ISS ISO |
GO_REF:0000024 UniProtKB:Q04999 (MGI:2682175|PMID:14551263) |
UniProt RGD |
PMID:14551263 |
GO_REF:0000024 MGI:2682175 |
NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982
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G |
Jun |
Jun proto-oncogene, AP-1 transcription factor subunit |
acts_upstream_of_or_within |
ISO |
MGI:2673694 (MGI:5608927|PMID:25224220) |
RGD |
PMID:25224220 |
MGI:5608927 |
NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
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G |
Kmt2c |
lysine methyltransferase 2C |
acts_upstream_of_or_within |
ISO |
MGI:3693319 (MGI:3692812|PMID:17021013) |
RGD |
PMID:17021013 |
MGI:3692812 |
NCBI chr 4:9,620,638...9,834,787
Ensembl chr 4:9,609,627...9,833,539
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G |
Map3k1 |
mitogen-activated protein kinase kinase kinase 1 |
acts_upstream_of_or_within |
ISO |
MGI:2676654 (MGI:5467663|PMID:23201579), (MGI:5608927|PMID:25224220) |
RGD |
PMID:23201579 PMID:25224220 |
MGI:5467663 MGI:5608927 |
NCBI chr 2:43,348,572...43,414,706
Ensembl chr 2:43,350,098...43,414,463
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G |
Osr2 |
odd-skipped related transciption factor 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3848564|PMID:19389375) |
UniProt RGD |
PMID:19389375 |
GO_REF:0000024 MGI:3848564 |
NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224
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G |
Prickle1 |
prickle planar cell polarity protein 1 |
involved_in |
ISO IEA |
MGI:5645931 (MGI:6117543|PMID:29450535) GO_REF:0000107 |
RGD Ensembl |
PMID:29450535 |
GO_REF:0000107 MGI:6117543 |
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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G |
Sos1 |
SOS Ras/Rac guanine nucleotide exchange factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:95294 (MGI:85697|PMID:9030684) |
RGD |
PMID:9030684 |
MGI:85697 |
NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107
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G |
Sox11 |
SRY-box transcription factor 11 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3052265|PMID:15254231) |
UniProt RGD |
PMID:15254231 |
GO_REF:0000024 MGI:3052265 |
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
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G |
Srf |
serum response factor |
acts_upstream_of_or_within |
ISO |
MGI:2445832|MGI:3522206 (MGI:4421610|PMID:20047077) |
RGD |
PMID:20047077 |
MGI:4421610 |
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
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G |
Stra6 |
signaling receptor and transporter of retinol STRA6 |
involved_in |
ISO |
(PMID:17273977) |
RGD |
PMID:17273977 |
|
NCBI chr 8:58,549,743...58,568,861
Ensembl chr 8:58,549,736...58,568,860
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G |
Tfap2a |
transcription factor AP-2 alpha |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:1313057|PMID:9811866) |
UniProt RGD |
PMID:9811866 |
GO_REF:0000024 MGI:1313057 |
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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G |
Twist1 |
twist family bHLH transcription factor 1 |
involved_in |
ISO |
(PMID:17070479) |
RGD |
PMID:17070479 |
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NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
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G |
Lhx1 |
LIM homeobox 1 |
involved_in |
ISO |
(MGI:3772525|PMID:18094249) |
RGD |
PMID:18094249 |
MGI:3772525 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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G |
Drd2 |
dopamine receptor D2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6359287|PMID:30936473) |
UniProt RGD |
PMID:30936473 |
GO_REF:0000024 MGI:6359287 |
NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
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G |
Flt1 |
Fms related receptor tyrosine kinase 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6359287|PMID:30936473) |
UniProt RGD |
PMID:30936473 |
GO_REF:0000024 MGI:6359287 |
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
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G |
Ninj1 |
ninjurin 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4940188|PMID:19557008) |
RGD |
PMID:19557008 |
MGI:4940188 |
NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704
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G |
Opn4 |
opsin 4 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6359287|PMID:30936473) |
UniProt RGD |
PMID:30936473 |
GO_REF:0000024 MGI:6359287 |
NCBI chr16:9,920,408...9,929,580
Ensembl chr16:9,920,491...10,005,711
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G |
Opn5 |
opsin 5 |
involved_in |
ISO |
(MGI:6359287|PMID:30936473) |
RGD |
PMID:30936473 |
MGI:6359287 |
NCBI chr 9:18,368,393...18,416,098
Ensembl chr 9:18,368,416...18,415,476
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G |
Slc17a6 |
solute carrier family 17 member 6 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6359287|PMID:30936473) |
UniProt RGD |
PMID:30936473 |
GO_REF:0000024 MGI:6359287 |
NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542
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G |
Slc6a3 |
solute carrier family 6 member 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6359287|PMID:30936473) |
UniProt RGD |
PMID:30936473 |
GO_REF:0000024 MGI:6359287 |
NCBI chr 1:29,709,443...29,750,413
Ensembl chr 1:29,709,443...29,750,413
|
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G |
Th |
tyrosine hydroxylase |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6359287|PMID:30936473) |
UniProt RGD |
PMID:30936473 |
GO_REF:0000024 MGI:6359287 |
NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
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|
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G |
Foxe3 |
forkhead box E3 |
involved_in |
ISS ISO |
PMID:17064680 (MGI:3703484|PMID:17064680) |
RGD |
PMID:17064680 PMID:17064680 |
MGI:3703484, RGD:10047226 |
NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454
|
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G |
Hif1a |
hypoxia inducible factor 1 subunit alpha |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:103223 (MGI:5429122|PMID:22627278) |
Ensembl RGD |
PMID:22627278 |
GO_REF:0000107 MGI:5429122 |
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
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G |
Hipk1 |
homeodomain interacting protein kinase 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:4818711|PMID:20579985) |
Ensembl RGD |
PMID:20579985 |
GO_REF:0000107 MGI:4818711 |
NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902
|
|
G |
Hipk2 |
homeodomain interacting protein kinase 2 |
involved_in |
ISO |
(MGI:4818711|PMID:20579985) |
RGD |
PMID:20579985 |
MGI:4818711 |
NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
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|
G |
Pax6 |
paired box 6 |
involved_in |
ISO IEA |
(PMID:7550230) GO_REF:0000107 |
RGD Ensembl |
PMID:7550230 |
GO_REF:0000107 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Pitx2 |
paired-like homeodomain 2 |
involved_in |
ISO |
(PMID:9437321) |
RGD |
PMID:9437321 |
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NCBI chr 2:217,717,738...217,737,293
Ensembl chr 2:217,717,693...217,737,293
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G |
Vhl |
von Hippel-Lindau tumor suppressor |
acts_upstream_of_or_within |
ISO |
MGI:106918|MGI:2136645 (MGI:5429122|PMID:22627278) |
RGD |
PMID:22627278 |
MGI:5429122 |
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
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G |
Birc7 |
baculoviral IAP repeat-containing 7 |
acts_upstream_of_or_within |
ISO |
MGI:3045749|MGI:5796183 (MGI:5766584|PMID:26218911) |
RGD |
PMID:26218911 |
MGI:5766584 |
NCBI chr 3:168,047,824...168,052,606
Ensembl chr 3:168,047,824...168,052,606
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G |
Casp6 |
caspase 6 |
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IEP |
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RGD |
PMID:15161922 |
RGD:2301319 |
NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
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G |
Cdk2 |
cyclin dependent kinase 2 |
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IEP |
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RGD |
PMID:10620399 |
RGD:724665 |
NCBI chr 7:1,129,878...1,137,431
Ensembl chr 7:1,129,811...1,137,403
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G |
Cdk4 |
cyclin-dependent kinase 4 |
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IEP |
|
RGD |
PMID:10620399 |
RGD:724665 |
NCBI chr 7:62,885,647...62,889,562
Ensembl chr 7:62,883,105...62,942,403
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G |
Cdon |
cell adhesion associated, oncogene regulated |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2653120 (MGI:4422144|PMID:19754878) GO_REF:0000107 |
RGD Ensembl |
PMID:19754878 |
GO_REF:0000107 MGI:4422144 |
NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
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G |
Cryaa |
crystallin, alpha A |
involved_in acts_upstream_of_or_within |
IEP IBA ISO |
PMID:21873635 MGI:1858025|MGI:2653028|MGI:88516 (MGI:2154010|PMID:11687536), (MGI:3617146|PMID:16439475), (MGI:85598|PMID:9023351) |
RGD |
PMID:9023351 PMID:11687536 PMID:16439475 PMID:8187157 PMID:21873635 |
MGI:2154010 MGI:3617146 MGI:85598, RGD:1600991, RGD:13792537 |
NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349
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G |
Cryab |
crystallin, alpha B |
acts_upstream_of_or_within |
ISO |
MGI:88515 (MGI:3617146|PMID:16439475) |
RGD |
PMID:16439475 |
MGI:3617146 |
NCBI chr 8:51,093,441...51,099,161
Ensembl chr 8:51,093,441...51,099,157
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G |
Cryba1 |
crystallin, beta A1 |
involved_in |
IEP IBA |
PMID:21873635 |
RGD GO_Central |
PMID:2753045 PMID:21873635 |
RGD:1298814, RGD:13792537 |
NCBI chr10:62,608,373...62,614,726
Ensembl chr10:62,608,383...62,614,726
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G |
Cryba2 |
crystallin, beta A2 |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:4950379 (MGI:4950336|PMID:21212184) |
RGD |
PMID:21212184 PMID:21873635 |
MGI:4950336, RGD:13792537 |
NCBI chr 9:76,447,250...76,457,968
Ensembl chr 9:76,447,251...76,450,460
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G |
Cryba4 |
crystallin, beta A4 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:44,378,734...44,393,226
Ensembl chr12:44,378,737...44,393,221
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G |
Crybb1 |
crystallin, beta B1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:44,369,734...44,383,344
Ensembl chr12:44,369,735...44,383,344
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G |
Crybb2 |
crystallin, beta B2 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:43,569,747...43,579,671
Ensembl chr12:43,569,747...43,579,671
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G |
Crybb3 |
crystallin, beta B3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr12:43,557,103...43,562,120
Ensembl chr12:43,557,103...43,562,120
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G |
Crybg3 |
crystallin beta-gamma domain containing 3 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr11:40,749,198...40,861,753
Ensembl chr11:40,749,214...40,861,752
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G |
Cryga |
crystallin, gamma A |
acts_upstream_of_or_within involved_in |
IEP ISO IBA |
MGI:1856493|MGI:1857595 (MGI:1333159|PMID:6510713), (MGI:65639|PMID:8034315), (MGI:69851|PMID:6877261), (MGI:71783|PMID:7088001) PMID:21873635 |
RGD |
PMID:6510713 PMID:6877261 PMID:7088001 PMID:8034315 PMID:2338125 PMID:21873635 More...
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MGI:1333159 MGI:65639 MGI:69851 MGI:71783, RGD:2303725, RGD:13792537 |
NCBI chr 9:66,482,176...66,512,873
Ensembl chr 9:66,482,176...66,509,896
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G |
Crygb |
crystallin, gamma B |
acts_upstream_of_or_within involved_in |
IEP ISO IBA |
MGI:1857597|MGI:3777015 (MGI:3691890|PMID:12426373), (MGI:3776178|PMID:18172107), (MGI:81294|PMID:8626090) PMID:21873635 |
RGD |
PMID:8626090 PMID:12426373 PMID:18172107 PMID:2338125 PMID:21873635 |
MGI:3691890 MGI:3776178 MGI:81294, RGD:2303725, RGD:13792537 |
NCBI chr 9:66,461,460...66,463,520
Ensembl chr 9:66,461,460...66,463,520
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G |
Crygc |
crystallin, gamma C |
involved_in |
IEP IBA |
PMID:21873635 |
RGD GO_Central |
PMID:2338125 PMID:21873635 |
RGD:2303725, RGD:13792537 |
NCBI chr 9:66,451,591...66,453,626
Ensembl chr 9:66,451,593...66,453,626
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G |
Crygd |
crystallin, gamma D |
acts_upstream_of_or_within involved_in |
IEP ISO IBA |
MGI:1858026|MGI:3762620 (MGI:1354024|PMID:10704279), (MGI:3762268|PMID:17652744) PMID:21873635 |
RGD |
PMID:10704279 PMID:17652744 PMID:2338125 PMID:21873635 |
MGI:1354024 MGI:3762268, RGD:2303725, RGD:13792537 |
NCBI chr 9:66,442,054...66,443,668
Ensembl chr 9:66,442,054...66,444,067
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G |
Cryge |
crystallin, gamma E |
involved_in |
IEP IBA |
PMID:21873635 |
RGD GO_Central |
PMID:2338125 PMID:21873635 |
RGD:2303725, RGD:13792537 |
NCBI chr 9:66,429,924...66,432,521
Ensembl chr 9:66,429,924...66,433,274
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G |
Crygf |
crystallin, gamma F |
involved_in |
IEP IBA |
PMID:21873635 |
RGD GO_Central |
PMID:2338125 PMID:21873635 |
RGD:2303725, RGD:13792537 |
NCBI chr 9:67,448,265...67,450,429
Ensembl chr 9:67,447,954...67,450,429
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G |
Crygn |
crystallin, gamma N |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 4:10,394,020...10,401,543
Ensembl chr 4:10,394,020...10,401,543
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G |
Crygs |
crystallin, gamma S |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:1861635 (MGI:65639|PMID:8034315), (MGI:69851|PMID:6877261) |
RGD |
PMID:6877261 PMID:8034315 PMID:21873635 |
MGI:65639 MGI:69851, RGD:13792537 |
NCBI chr11:78,207,170...78,212,273
Ensembl chr11:78,207,170...78,212,273
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G |
Ctns |
cystinosin, lysosomal cystine transporter |
acts_upstream_of_or_within |
ISO |
MGI:2388945 (MGI:5302597|PMID:21897743) |
RGD |
PMID:21897743 |
MGI:5302597 |
NCBI chr10:57,801,551...57,817,213
Ensembl chr10:57,801,456...57,817,120
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G |
Dlg1 |
discs large MAGUK scaffold protein 1 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2680670 (MGI:2682188|PMID:14645510) |
Ensembl RGD |
PMID:14645510 |
GO_REF:0000107 MGI:2682188 |
NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
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G |
Fat1 |
FAT atypical cadherin 1 |
involved_in |
ISO |
MGI:2662293 (MGI:5766588|PMID:26114487) |
RGD |
PMID:26114487 |
MGI:5766588 |
NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
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G |
Foxe3 |
forkhead box E3 |
involved_in |
ISS ISO |
PMID:17064680 (MGI:3703484|PMID:17064680) GO_REF:0000024 (PMID:27218149) |
RGD UniProt |
PMID:17064680 PMID:27218149 PMID:17064680 |
GO_REF:0000024 MGI:3703484, RGD:10047226 |
NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454
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G |
Frs2 |
fibroblast growth factor receptor substrate 2 |
acts_upstream_of_or_within |
ISO |
MGI:3045749|MGI:3768912 (MGI:5447585|PMID:23136392) |
RGD |
PMID:23136392 |
MGI:5447585 |
NCBI chr 7:52,711,255...52,792,758
Ensembl chr 7:52,711,257...52,792,743
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G |
Gata3 |
GATA binding protein 3 |
acts_upstream_of_or_within |
ISO |
MGI:2181200 (MGI:4354418|PMID:19623612) |
RGD |
PMID:19623612 |
MGI:4354418 |
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
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G |
Gja1 |
gap junction protein, alpha 1 |
acts_upstream_of_or_within |
ISO |
MGI:1857177 (MGI:1267300|PMID:9620080) |
RGD |
PMID:9620080 |
MGI:1267300 |
NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
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G |
Gja8 |
gap junction protein, alpha 8 |
acts_upstream_of_or_within |
ISO |
MGI:1857499 (MGI:69851|PMID:6877261) |
RGD |
PMID:6877261 |
MGI:69851 |
NCBI chr 2:184,490,840...184,492,456
Ensembl chr 2:184,490,840...184,492,456
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G |
Gje1 |
gap junction protein, epsilon 1 |
acts_upstream_of_or_within |
ISO |
MGI:3529958 (MGI:3795311|PMID:18385072) |
RGD |
PMID:18385072 |
MGI:3795311 |
NCBI chr 1:9,086,425...9,088,138
Ensembl chr 1:9,086,348...9,088,138
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G |
Lim2 |
lens intrinsic membrane protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:1862040 (MGI:1333159|PMID:6510713), (MGI:69851|PMID:6877261), (MGI:71783|PMID:7088001), (MGI:82332|PMID:8812411) |
RGD |
PMID:6510713 PMID:6877261 PMID:7088001 PMID:8812411 |
MGI:1333159 MGI:69851 MGI:71783 MGI:82332 |
NCBI chr 1:93,837,597...93,843,769
Ensembl chr 1:93,837,597...93,843,769
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G |
Maf |
MAF bZIP transcription factor |
acts_upstream_of_or_within |
ISO |
MGI:2148635|MGI:2148636|MGI:2148637 (MGI:1340085|PMID:10383433), (MGI:1350584|PMID:10603348), (MGI:3760711|PMID:12835653) |
RGD |
PMID:10383433 PMID:10603348 PMID:12835653 |
MGI:1340085 MGI:1350584 MGI:3760711 |
NCBI chr19:43,353,867...43,713,162
Ensembl chr19:43,360,342...43,712,365
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G |
Med1 |
mediator complex subunit 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:2158098|PMID:11724781) |
UniProt RGD |
PMID:11724781 |
GO_REF:0000024 MGI:2158098 |
NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
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G |
Mip |
major intrinsic protein of lens fiber |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857105 (MGI:55175|PMID:7333462) |
Ensembl RGD |
PMID:7333462 |
GO_REF:0000107 MGI:55175 |
NCBI chr 7:643,502...654,573
Ensembl chr 7:647,315...654,400
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G |
Ndp |
norrin cystine knot growth factor NDP |
acts_upstream_of_or_within |
ISO |
MGI:2676199 (MGI:3575380|PMID:15716406) |
RGD |
PMID:15716406 |
MGI:3575380 |
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
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G |
Nhs |
NHS actin remodeling regulator |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:1861111 (MGI:64544|PMID:8282045) |
RGD |
PMID:8282045 PMID:21873635 |
MGI:64544, RGD:13792537 |
NCBI chr X:32,551,974...32,892,961
Ensembl chr X:32,552,026...32,889,992
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G |
Pax6 |
paired box 6 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2156742 (MGI:69851|PMID:6877261) |
Ensembl RGD |
PMID:6877261 |
GO_REF:0000107 MGI:69851 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Pds5a |
PDS5 cohesin associated factor A |
acts_upstream_of_or_within |
ISO |
MGI:3722688 (MGI:3847057|PMID:19412548) |
RGD |
PMID:19412548 |
MGI:3847057 |
NCBI chr14:42,551,653...42,651,074
Ensembl chr14:42,552,647...42,648,669
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G |
Pds5b |
PDS5 cohesin associated factor B |
acts_upstream_of_or_within |
ISO |
MGI:3722688 (MGI:3847057|PMID:19412548) |
RGD |
PMID:19412548 |
MGI:3847057 |
NCBI chr12:202,481...345,596
Ensembl chr12:255,313...345,596
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G |
Pitx3 |
paired-like homeodomain 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3831639|PMID:19007884), (MGI:4353482|PMID:19334279) |
UniProt RGD |
PMID:19007884 PMID:19334279 |
GO_REF:0000024 MGI:3831639 MGI:4353482 |
NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892
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G |
Prox1 |
prospero homeobox 1 |
involved_in |
ISO |
(PMID:8812486) |
RGD |
PMID:8812486 |
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NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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G |
Pygo2 |
pygopus family PHD finger 2 |
acts_upstream_of_or_within |
ISO |
MGI:3712856 (MGI:3712628|PMID:17425782) |
RGD |
PMID:17425782 |
MGI:3712628 |
NCBI chr 2:174,849,670...174,854,758
Ensembl chr 2:174,849,936...174,854,758
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G |
Six3 |
SIX homeobox 3 |
involved_in |
ISO |
(MGI:1929788|PMID:11139622) |
RGD |
PMID:11139622 |
MGI:1929788 |
NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
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G |
Six5 |
SIX homeobox 5 |
acts_upstream_of_or_within |
ISO |
MGI:2148689|MGI:2148692 (MGI:1855730|PMID:10802668), (MGI:1855731|PMID:10802667) |
RGD |
PMID:10802667 PMID:10802668 |
MGI:1855730 MGI:1855731 |
NCBI chr 1:78,740,812...78,745,890
Ensembl chr 1:78,741,367...78,745,890
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G |
Slitrk6 |
SLIT and NTRK-like family, member 6 |
acts_upstream_of_or_within |
ISO |
MGI:4417931 (MGI:5513052|PMID:23543054) |
RGD |
PMID:23543054 |
MGI:5513052 |
NCBI chr15:87,563,506...87,570,125
Ensembl chr15:87,563,322...87,570,393
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G |
Tbc1d20 |
TBC1 domain family, member 20 |
acts_upstream_of_or_within |
ISO |
MGI:1856684 (MGI:5551670|PMID:24239381) |
RGD |
PMID:24239381 |
MGI:5551670 |
NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121
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G |
Tbc1d32 |
TBC1 domain family, member 32 |
acts_upstream_of_or_within |
ISO |
MGI:4440463 (MGI:4439200|PMID:20159594) |
RGD |
PMID:20159594 |
MGI:4439200 |
NCBI chr20:35,359,865...35,590,992
Ensembl chr20:35,359,863...35,590,415
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G |
Tgfbr1 |
transforming growth factor, beta receptor 1 |
acts_upstream_of_or_within |
ISO |
(MGI:2151112|PMID:11641223) |
RGD |
PMID:11641223 |
MGI:2151112 |
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
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G |
Tgfbr2 |
transforming growth factor, beta receptor 2 |
acts_upstream_of_or_within |
ISO |
(MGI:2151112|PMID:11641223) |
RGD |
PMID:11641223 |
MGI:2151112 |
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
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G |
Bfsp1 |
beaded filament structural protein 1 |
involved_in acts_upstream_of_or_within |
IBA IEA ISO |
PMID:21873635 GO_REF:0000107 (MGI:2673300|PMID:15037121) |
Ensembl RGD |
PMID:15037121 PMID:21873635 |
GO_REF:0000107 MGI:2673300, RGD:13792537 |
NCBI chr 3:131,195,087...131,252,668
Ensembl chr 3:131,195,087...131,229,337
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G |
Bfsp2 |
beaded filament structural protein 2 |
acts_upstream_of_or_within |
ISO |
MGI:2671074 (MGI:2673300|PMID:15037121), (MGI:3717045|PMID:17065509) |
RGD |
PMID:15037121 PMID:17065509 |
MGI:2673300 MGI:3717045 |
NCBI chr 8:104,006,226...104,063,399
Ensembl chr 8:104,006,226...104,063,399
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|
G |
Crygb |
crystallin, gamma B |
acts_upstream_of_or_within |
ISO |
MGI:3777015 (MGI:3776178|PMID:18172107) |
RGD |
PMID:18172107 |
MGI:3776178 |
NCBI chr 9:66,461,460...66,463,520
Ensembl chr 9:66,461,460...66,463,520
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G |
Fgfr2 |
fibroblast growth factor receptor 2 |
acts_upstream_of_or_within |
ISO |
MGI:3044679|MGI:3045749|MGI:95524 (MGI:3796810|PMID:18455718), (MGI:5447585|PMID:23136392) |
RGD |
PMID:18455718 PMID:23136392 |
MGI:3796810 MGI:5447585 |
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
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G |
Fgfr3 |
fibroblast growth factor receptor 3 |
acts_upstream_of_or_within |
ISO |
MGI:95523 (MGI:3796810|PMID:18455718) |
RGD |
PMID:18455718 |
MGI:3796810 |
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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G |
Frs2 |
fibroblast growth factor receptor substrate 2 |
acts_upstream_of_or_within |
ISO |
MGI:3045749|MGI:3768912|MGI:97385 (MGI:5447585|PMID:23136392) |
RGD |
PMID:23136392 |
MGI:5447585 |
NCBI chr 7:52,711,255...52,792,758
Ensembl chr 7:52,711,257...52,792,743
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|
G |
Smarca4 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 |
acts_upstream_of_or_within |
ISO |
MGI:2386105 (MGI:4888440|PMID:21118511) |
RGD |
PMID:21118511 |
MGI:4888440 |
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
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G |
Tmod1 |
tropomodulin 1 |
involved_in |
ISO |
UniProtKB:Q6NVD9 (MGI:5475090|PMID:23144950) |
RGD |
PMID:23144950 |
MGI:5475090 |
NCBI chr 5:60,316,445...60,393,957
Ensembl chr 5:60,338,512...60,393,956
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G |
Vim |
vimentin |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:2673300|PMID:15037121) |
Ensembl RGD |
PMID:15037121 |
GO_REF:0000107 MGI:2673300 |
NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
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G |
Crygd |
crystallin, gamma D |
acts_upstream_of_or_within |
IDA ISO |
MGI:3762620 (MGI:3762268|PMID:17652744) |
RGD |
PMID:17652744 PMID:8575616 |
MGI:3762268, RGD:1601018 |
NCBI chr 9:66,442,054...66,443,668
Ensembl chr 9:66,442,054...66,444,067
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G |
Fzr1 |
fizzy and cell division cycle 20 related 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3720408|PMID:17215516) |
RGD |
PMID:17215516 |
MGI:3720408 |
NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952
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G |
Kdm5b |
lysine demethylase 5B |
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IEP |
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RGD |
PMID:24142921 |
RGD:9587771 |
NCBI chr13:46,001,589...46,073,868
Ensembl chr13:46,002,542...46,073,872
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G |
Maf |
MAF bZIP transcription factor |
involved_in acts_upstream_of_or_within |
IEA ISO IBA |
GO_REF:0000107 MGI:2148636|MGI:2148637 (MGI:1340085|PMID:10383433), (MGI:3760711|PMID:12835653) PMID:21873635 |
Ensembl RGD |
PMID:10383433 PMID:12835653 PMID:21873635 |
GO_REF:0000107 MGI:1340085 MGI:3760711, RGD:13792537 |
NCBI chr19:43,353,867...43,713,162
Ensembl chr19:43,360,342...43,712,365
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G |
Nf2 |
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor |
involved_in |
ISO |
(MGI:4457460|PMID:20181838) |
RGD |
PMID:20181838 |
MGI:4457460 |
NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
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G |
Ntrk3 |
neurotrophic receptor tyrosine kinase 3 |
acts_upstream_of_or_within |
ISO |
MGI:1100860 (MGI:5447585|PMID:23136392) |
RGD |
PMID:23136392 |
MGI:5447585 |
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
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G |
Pitx3 |
paired-like homeodomain 3 |
involved_in |
ISO |
(MGI:3831639|PMID:19007884) |
RGD |
PMID:19007884 |
MGI:3831639 |
NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892
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G |
Plaat1 |
phospholipase A and acyltransferase 1 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr11:71,517,492...71,537,142
Ensembl chr11:71,517,493...71,527,020
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G |
Plaat3 |
phospholipase A and acyltransferase 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6710184|PMID:33854238) |
UniProt RGD |
PMID:33854238 |
GO_REF:0000024 MGI:6710184 |
NCBI chr 1:204,782,608...204,816,397
Ensembl chr 1:204,782,729...204,817,667
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G |
Six3 |
SIX homeobox 3 |
involved_in |
ISO |
(MGI:2181466|PMID:12072567) |
RGD |
PMID:12072567 |
MGI:2181466 |
NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
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G |
Skil |
SKI-like proto-oncogene |
acts_upstream_of_or_within |
ISO |
(MGI:3720408|PMID:17215516) |
RGD |
PMID:17215516 |
MGI:3720408 |
NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080
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G |
Slc7a11 |
solute carrier family 7 member 11 |
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IEP |
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RGD |
PMID:16043861 |
RGD:2315033 |
NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
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G |
Smad3 |
SMAD family member 3 |
acts_upstream_of_or_within |
ISO |
(MGI:3720408|PMID:17215516) |
RGD |
PMID:17215516 |
MGI:3720408 |
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
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G |
Tdrd7 |
tudor domain containing 7 |
involved_in |
ISO ISS IBA |
(PMID:21436445) GO_REF:0000024 PMID:21873635 (MGI:4943339|PMID:21436445) |
RGD UniProt |
PMID:21436445 PMID:21873635 |
GO_REF:0000024 MGI:4943339, RGD:13792537 |
NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544
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G |
Tgfb1 |
transforming growth factor, beta 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3720408|PMID:17215516) |
RGD |
PMID:17215516 |
MGI:3720408 |
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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G |
Abi2 |
abl-interactor 2 |
involved_in |
ISO |
(MGI:3525751|PMID:15572692) |
RGD |
PMID:15572692 |
MGI:3525751 |
NCBI chr 9:61,856,379...61,904,029
Ensembl chr 9:61,827,139...61,905,699
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G |
Atf4 |
activating transcription factor 4 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:1339872|PMID:10096021), (MGI:1859108|PMID:10885750), (MGI:2158533|PMID:11806972) |
UniProt RGD |
PMID:10096021 PMID:10885750 PMID:11806972 |
GO_REF:0000024 MGI:1339872 MGI:1859108 MGI:2158533 |
NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
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G |
Cryaa |
crystallin, alpha A |
acts_upstream_of_or_within |
ISO |
MGI:3665275|MGI:3777403 (MGI:3655912|PMID:16799046), (MGI:3775669|PMID:18056999) |
RGD |
PMID:16799046 PMID:18056999 |
MGI:3655912 MGI:3775669 |
NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349
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G |
Crygb |
crystallin, gamma B |
acts_upstream_of_or_within |
ISO |
MGI:1857597 (MGI:3691890|PMID:12426373), (MGI:81294|PMID:8626090) |
RGD |
PMID:8626090 PMID:12426373 |
MGI:3691890 MGI:81294 |
NCBI chr 9:66,461,460...66,463,520
Ensembl chr 9:66,461,460...66,463,520
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G |
Epha2 |
Eph receptor A2 |
involved_in |
ISO |
(MGI:3831440|PMID:18948590) |
RGD |
PMID:18948590 |
MGI:3831440 |
NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117
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G |
Prox1 |
prospero homeobox 1 |
involved_in |
ISO |
(PMID:11850194) (MGI:1332720|PMID:10080188) |
RGD |
PMID:10080188 PMID:11850194 |
MGI:1332720 |
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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G |
Tbc1d20 |
TBC1 domain family, member 20 |
acts_upstream_of_or_within |
ISO |
MGI:1856684 (MGI:5551670|PMID:24239381) |
RGD |
PMID:24239381 |
MGI:5551670 |
NCBI chr 3:140,768,537...140,787,010
Ensembl chr 3:140,768,537...140,785,121
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G |
Bmp4 |
bone morphogenetic protein 4 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1857137 (MGI:1316914|PMID:9851982) |
Ensembl RGD |
PMID:9851982 |
GO_REF:0000107 MGI:1316914 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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G |
Hipk1 |
homeodomain interacting protein kinase 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (MGI:4818711|PMID:20579985) |
Ensembl RGD |
PMID:20579985 |
GO_REF:0000107 MGI:4818711 |
NCBI chr 2:191,248,817...191,299,787
Ensembl chr 2:191,248,817...191,298,902
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G |
Hipk2 |
homeodomain interacting protein kinase 2 |
involved_in |
ISO |
(MGI:4818711|PMID:20579985) |
RGD |
PMID:20579985 |
MGI:4818711 |
NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
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G |
Pou2f1 |
POU class 2 homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:98364 (MGI:3701404|PMID:17140559) |
RGD |
PMID:17140559 |
MGI:3701404 |
NCBI chr13:78,120,617...78,263,306
Ensembl chr13:78,130,685...78,263,363
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G |
Six3 |
SIX homeobox 3 |
acts_upstream_of_or_within |
ISO |
MGI:3693322 (MGI:3692850|PMID:17066077) |
RGD |
PMID:17066077 |
MGI:3692850 |
NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
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G |
Sox2 |
SRY-box transcription factor 2 |
acts_upstream_of_or_within |
ISO |
MGI:101898 (MGI:3701404|PMID:17140559) |
RGD |
PMID:17140559 |
MGI:3701404 |
NCBI chr 2:117,536,929...117,539,338
Ensembl chr 2:117,536,929...117,539,338
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G |
Tfap2a |
transcription factor AP-2 alpha |
acts_upstream_of_or_within |
ISO |
MGI:1888387 (MGI:1347707|PMID:10571739) |
RGD |
PMID:10571739 |
MGI:1347707 |
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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G |
Bcar3 |
BCAR3 adaptor protein, NSP family member |
acts_upstream_of_or_within |
ISO |
MGI:4359826 (MGI:4358852|PMID:19365570) |
RGD |
PMID:19365570 |
MGI:4358852 |
NCBI chr 2:210,525,260...210,638,674
Ensembl chr 2:210,525,260...210,638,798
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G |
Cited2 |
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 |
acts_upstream_of_or_within |
ISO |
MGI:3045749|MGI:3696062 (MGI:3807101|PMID:18653562) |
RGD |
PMID:18653562 |
MGI:3807101 |
NCBI chr 1:12,312,426...12,314,869
Ensembl chr 1:12,312,160...12,314,897
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G |
Cryaa |
crystallin, alpha A |
acts_upstream_of_or_within |
ISO |
MGI:1858023|MGI:3665274|MGI:3665275 (MGI:3655912|PMID:16799046), (MGI:82388|PMID:8812430) |
RGD |
PMID:8812430 PMID:16799046 |
MGI:3655912 MGI:82388 |
NCBI chr20:9,783,605...9,787,351
Ensembl chr20:9,783,605...9,787,349
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G |
Ctnnb1 |
catenin beta 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2148567|MGI:3045749 (MGI:3603687|PMID:16102745) GO_REF:0000107 |
RGD Ensembl |
PMID:16102745 |
GO_REF:0000107 MGI:3603687 |
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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G |
Fgfr3 |
fibroblast growth factor receptor 3 |
acts_upstream_of_or_within |
ISO |
(MGI:1933072|PMID:11290300) |
RGD |
PMID:11290300 |
MGI:1933072 |
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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G |
Lctl |
lactase-like |
involved_in |
ISO |
(MGI:6274960|PMID:29425878) |
RGD |
PMID:29425878 |
MGI:6274960 |
NCBI chr 8:64,618,356...64,654,851
Ensembl chr 8:64,618,350...64,639,357
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G |
Meis1 |
Meis homeobox 1 |
acts_upstream_of_or_within |
ISO |
MGI:3029063 (MGI:3028436|PMID:14713950) |
RGD |
PMID:14713950 |
MGI:3028436 |
NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265
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G |
Nectin1 |
nectin cell adhesion molecule 1 |
acts_upstream_of_or_within |
ISO |
MGI:3605480 (MGI:3604842|PMID:15728677) |
RGD |
PMID:15728677 |
MGI:3604842 |
NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
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G |
Nectin3 |
nectin cell adhesion molecule 3 |
acts_upstream_of_or_within |
ISO |
MGI:3605481 (MGI:3604842|PMID:15728677) |
RGD |
PMID:15728677 |
MGI:3604842 |
NCBI chr11:54,362,712...54,461,316
Ensembl chr11:54,364,487...54,462,519
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G |
Pitx3 |
paired-like homeodomain 3 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4353482|PMID:19334279) |
UniProt RGD |
PMID:19334279 |
GO_REF:0000024 MGI:4353482 |
NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892
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G |
Prox1 |
prospero homeobox 1 |
involved_in |
ISO |
(MGI:1332720|PMID:10080188) |
RGD |
PMID:10080188 |
MGI:1332720 |
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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G |
Ski |
Ski proto-oncogene |
acts_upstream_of_or_within |
ISO |
MGI:2177555 (MGI:3693412|PMID:17003410) |
RGD |
PMID:17003410 |
MGI:3693412 |
NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
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G |
Sox1 |
SRY-box transcription factor 1 |
acts_upstream_of_or_within |
ISO |
MGI:2137412 (MGI:1201714|PMID:9512512) |
RGD |
PMID:9512512 |
MGI:1201714 |
NCBI chr16:77,134,795...77,139,628
Ensembl chr16:77,137,584...77,138,762
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G |
Sox11 |
SRY-box transcription factor 11 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3797299|PMID:18423449) |
UniProt RGD |
PMID:18423449 |
GO_REF:0000024 MGI:3797299 |
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
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G |
Tdrd7 |
tudor domain containing 7 |
involved_in |
ISS IBA ISO |
GO_REF:0000024 PMID:21873635 (MGI:4943339|PMID:21436445) (PMID:21436445) |
UniProt RGD |
PMID:21436445 PMID:21873635 |
GO_REF:0000024 MGI:4943339, RGD:13792537 |
NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544
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G |
Tfap2a |
transcription factor AP-2 alpha |
acts_upstream_of_or_within |
ISO |
MGI:2176682 (MGI:1329246|PMID:9918694), (MGI:3774683|PMID:18224708) |
RGD |
PMID:9918694 PMID:18224708 |
MGI:1329246 MGI:3774683 |
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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G |
Frs2 |
fibroblast growth factor receptor substrate 2 |
acts_upstream_of_or_within |
ISO |
MGI:3521833 (MGI:3513737|PMID:15569927) |
RGD |
PMID:15569927 |
MGI:3513737 |
NCBI chr 7:52,711,255...52,792,758
Ensembl chr 7:52,711,257...52,792,743
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G |
Prox1 |
prospero homeobox 1 |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:11850194) (MGI:3836138|PMID:11850194) |
RGD |
PMID:11850194 |
MGI:3836138 |
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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G |
Casz1 |
castor zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:3052661|MGI:4841554 (MGI:5629913|PMID:25654255) |
RGD |
PMID:25654255 |
MGI:5629913 |
NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400
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G |
Gdf11 |
growth differentiation factor 11 |
acts_upstream_of_or_within |
ISO |
(MGI:3581514|PMID:15976303) |
RGD |
PMID:15976303 |
MGI:3581514 |
NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
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G |
Hes1 |
hes family bHLH transcription factor 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2149672 (MGI:3588911|PMID:16038893) GO_REF:0000107 |
RGD Ensembl |
PMID:16038893 |
GO_REF:0000107 MGI:3588911 |
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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G |
Pou4f2 |
POU class 4 homeobox 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5316576|PMID:21875655) |
UniProt RGD |
PMID:21875655 |
GO_REF:0000024 MGI:5316576 |
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
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G |
Foxe3 |
forkhead box E3 |
involved_in |
ISS ISO |
PMID:16199865 (MGI:1352262|PMID:10652278), (MGI:1861492|PMID:10890982), (MGI:3603877|PMID:16199865) |
RGD |
PMID:10652278 PMID:10890982 PMID:16199865 PMID:16199865 |
MGI:1352262 MGI:1861492 MGI:3603877, RGD:10047273 |
NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454
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G |
Spred1 |
sprouty-related, EVH1 domain containing 1 |
involved_in |
ISO |
(MGI:6414698|PMID:29501879) |
RGD |
PMID:29501879 |
MGI:6414698 |
NCBI chr 3:103,983,120...104,050,321
Ensembl chr 3:103,983,072...104,049,718
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G |
Spred2 |
sprouty-related, EVH1 domain containing 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:6414698|PMID:29501879) |
UniProt RGD |
PMID:29501879 |
GO_REF:0000024 MGI:6414698 |
NCBI chr14:94,226,312...94,248,162
Ensembl chr14:94,148,837...94,249,162
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G |
Spred3 |
sprouty-related, EVH1 domain containing 3 |
involved_in |
ISO |
(MGI:6414698|PMID:29501879) |
RGD |
PMID:29501879 |
MGI:6414698 |
NCBI chr 1:84,458,779...84,470,425
Ensembl chr 1:84,459,314...84,470,249
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G |
Spry1 |
sprouty RTK signaling antagonist 1 |
involved_in |
ISO |
(MGI:6414698|PMID:29501879) |
RGD |
PMID:29501879 |
MGI:6414698 |
NCBI chr 2:120,557,276...120,561,918
Ensembl chr 2:120,556,706...120,566,189
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G |
Spry2 |
sprouty RTK signaling antagonist 2 |
involved_in |
ISO |
(MGI:6414698|PMID:29501879) |
RGD |
PMID:29501879 |
MGI:6414698 |
NCBI chr15:82,692,312...82,697,408
Ensembl chr15:82,692,143...82,698,009
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G |
Bcl2 |
BCL2, apoptosis regulator |
acts_upstream_of_or_within |
ISO |
MGI:1857430 (MGI:1336407|PMID:10321489) |
RGD |
PMID:10321489 |
MGI:1336407 |
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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G |
Bhlhe23 |
basic helix-loop-helix family, member e23 |
acts_upstream_of_or_within |
ISO |
MGI:3054837 (MGI:3054140|PMID:15363390) |
RGD |
PMID:15363390 |
MGI:3054140 |
NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223
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G |
Tmem215 |
transmembrane protein 215 |
acts_upstream_of_or_within |
ISO |
(MGI:6507628|PMID:30370660) |
RGD |
PMID:30370660 |
MGI:6507628 |
NCBI chr 5:55,612,568...55,615,828
Ensembl chr 5:55,612,568...55,615,828
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Casz1 |
castor zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:3052661|MGI:4841554 (MGI:5629913|PMID:25654255) |
RGD |
PMID:25654255 |
MGI:5629913 |
NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400
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Angptl7 |
angiopoietin like 7 |
involved_in |
ISO |
(PMID:25622036) |
RGD |
PMID:25622036 |
|
NCBI chr 5:158,932,094...158,937,597
Ensembl chr 5:158,932,794...158,937,324
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Actl6a |
actin-like 6A |
involved_in |
ISO |
(PMID:18816825) |
RGD |
PMID:18816825 |
|
NCBI chr 2:115,492,374...115,508,401
Ensembl chr 2:115,492,285...115,508,401
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G |
Atoh7 |
atonal bHLH transcription factor 7 |
acts_upstream_of_or_within |
ISO |
MGI:2159015 (MGI:5288596|PMID:21441919) (PMID:21441919) |
RGD |
PMID:21441919 |
MGI:5288596 |
NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
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Atp2b1 |
ATPase plasma membrane Ca2+ transporting 1 |
|
IEP |
|
RGD |
PMID:16079002 |
RGD:2317729 |
NCBI chr 7:33,735,595...33,845,226
Ensembl chr 7:33,735,871...33,843,295
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Atp2b2 |
ATPase plasma membrane Ca2+ transporting 2 |
|
IEP |
|
RGD |
PMID:16079002 |
RGD:2317729 |
NCBI chr 4:146,896,332...147,140,665
Ensembl chr 4:146,896,332...147,140,665
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G |
Atp2b3 |
ATPase plasma membrane Ca2+ transporting 3 |
|
IEP |
|
RGD |
PMID:16079002 |
RGD:2317729 |
NCBI chr X:151,216,483...151,289,069
Ensembl chr X:151,216,507...151,286,775
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G |
Atp2b4 |
ATPase plasma membrane Ca2+ transporting 4 |
|
IEP |
|
RGD |
PMID:16079002 |
RGD:2317729 |
NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246
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G |
Bsg |
basigin (Ok blood group) |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:1888850|PMID:10967074), (MGI:1932603|PMID:11273674), (MGI:3610672|PMID:11853760) |
UniProt RGD |
PMID:10967074 PMID:11273674 PMID:11853760 |
GO_REF:0000024 MGI:1888850 MGI:1932603 MGI:3610672 |
NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387
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G |
Casp2 |
caspase 2 |
|
IEP |
|
RGD |
PMID:9809666 |
RGD:4107085 |
NCBI chr 4:71,149,632...71,167,388
Ensembl chr 4:71,149,669...71,167,379
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G |
Gpm6a |
glycoprotein m6a |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3811956|PMID:18776950) |
UniProt RGD |
PMID:18776950 |
GO_REF:0000024 MGI:3811956 |
NCBI chr16:36,641,282...36,973,477
Ensembl chr16:36,641,284...36,973,475
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G |
Ndp |
norrin cystine knot growth factor NDP |
acts_upstream_of_or_within |
ISO |
MGI:2676199 (MGI:3575380|PMID:15716406) |
RGD |
PMID:15716406 |
MGI:3575380 |
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
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G |
Optn |
optineurin |
|
IEP |
|
RGD |
PMID:17687037 |
RGD:7800681 |
NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
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G |
Psen1 |
presenilin 1 |
|
IEP |
|
RGD |
PMID:12401445 |
RGD:729595 |
NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
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G |
Rab11fip4 |
RAB11 family interacting protein 4 |
acts_upstream_of_or_within |
ISO |
(MGI:3694624|PMID:17089410) |
RGD |
PMID:17089410 |
MGI:3694624 |
NCBI chr10:64,550,109...64,658,123
Ensembl chr10:64,550,177...64,654,759
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G |
Rpe65 |
retinoid isomerohydrolase RPE65 |
|
IDA |
|
RGD |
PMID:2631392 |
RGD:9585660 |
NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403
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G |
Slc17a6 |
solute carrier family 17 member 6 |
|
IEP |
|
RGD |
PMID:18482716 |
RGD:9999162 |
NCBI chr 1:101,212,489...101,252,543
Ensembl chr 1:101,212,489...101,252,542
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G |
Slc17a7 |
solute carrier family 17 member 7 |
|
IEP |
|
RGD |
PMID:18482716 |
RGD:9999162 |
NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
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G |
Slc17a8 |
solute carrier family 17 member 8 |
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IEP |
|
RGD |
PMID:18482716 |
RGD:9999162 |
NCBI chr 7:23,994,212...24,049,498
Ensembl chr 7:23,994,217...24,048,079
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G |
Smarca4 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 |
involved_in |
ISO IEA |
(PMID:18816825) GO_REF:0000107 |
RGD Ensembl |
PMID:18816825 |
GO_REF:0000107 |
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
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G |
Smarcd3 |
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 |
involved_in acts_upstream_of_or_within |
ISO |
(PMID:18816825) (MGI:3809321|PMID:18816825) |
RGD |
PMID:18816825 |
MGI:3809321 |
NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326
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G |
Tgfb2 |
transforming growth factor, beta 2 |
involved_in |
ISO |
(MGI:894212|PMID:9217007) |
RGD |
PMID:9217007 |
MGI:894212 |
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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G |
Arid1a |
AT-rich interaction domain 1A |
acts_upstream_of_or_within |
ISO |
MGI:5469314 (MGI:5466629|PMID:23129809) |
RGD |
PMID:23129809 |
MGI:5466629 |
NCBI chr 5:145,908,181...145,981,609
Ensembl chr 5:145,908,181...145,985,564
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G |
Aldh1a1 |
aldehyde dehydrogenase 1 family, member A1 |
acts_upstream_of_or_within |
ISO |
MGI:1861722 (MGI:3624188|PMID:16611695) |
RGD |
PMID:16611695 |
MGI:3624188 |
NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961
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G |
Aldh1a3 |
aldehyde dehydrogenase 1 family, member A3 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1353450 (MGI:3624188|PMID:16611695) |
Ensembl RGD |
PMID:16611695 |
GO_REF:0000107 MGI:3624188 |
NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436
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G |
Pax2 |
paired box 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:84247|PMID:8951055) |
UniProt RGD |
PMID:8951055 |
GO_REF:0000024 MGI:84247 |
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
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G |
Tfap2a |
transcription factor AP-2 alpha |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4439459|PMID:20150232) |
UniProt RGD |
PMID:20150232 |
GO_REF:0000024 MGI:4439459 |
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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G |
Six3 |
SIX homeobox 3 |
involved_in |
ISO |
(MGI:2136715|PMID:11458394) |
RGD |
PMID:11458394 |
MGI:2136715 |
NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
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G |
Tfap2a |
transcription factor AP-2 alpha |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:4439459|PMID:20150232) |
UniProt RGD |
PMID:20150232 |
GO_REF:0000024 MGI:4439459 |
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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G |
Dlx1 |
distal-less homeobox 1 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5316576|PMID:21875655) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:21875655 |
GO_REF:0000024 GO_REF:0000107 MGI:5316576 |
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
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G |
Dlx2 |
distal-less homeobox 2 |
involved_in |
ISS ISO IEA |
GO_REF:0000024 (MGI:5316576|PMID:21875655) GO_REF:0000107 |
UniProt RGD Ensembl |
PMID:21875655 |
GO_REF:0000024 GO_REF:0000107 MGI:5316576 |
NCBI chr 3:56,371,347...56,373,230
Ensembl chr 3:56,370,483...56,373,597
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G |
Tgif1 |
TGFB-induced factor homeobox 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3826282|PMID:18973577) |
RGD |
PMID:18973577 |
MGI:3826282 |
NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
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G |
Tgif2 |
TGFB-induced factor homeobox 2 |
acts_upstream_of_or_within |
ISO |
(MGI:3826300|PMID:18926818) |
RGD |
PMID:18926818 |
MGI:3826300 |
NCBI chr 3:145,333,152...145,348,599
Ensembl chr 3:145,333,418...145,348,596
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G |
Foxe3 |
forkhead box E3 |
involved_in |
ISS ISO |
PMID:16199865 (PMID:22527307) (MGI:1352262|PMID:10652278), (MGI:3603877|PMID:16199865) |
RGD |
PMID:10652278 PMID:16199865 PMID:22527307 PMID:16199865 PMID:22527307 |
MGI:1352262 MGI:3603877, RGD:10047273, RGD:10047255 |
NCBI chr 5:128,445,594...128,446,454
Ensembl chr 5:128,445,594...128,446,454
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G |
Sox11 |
SRY-box transcription factor 11 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3797299|PMID:18423449) |
UniProt RGD |
PMID:18423449 |
GO_REF:0000024 MGI:3797299 |
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
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G |
Fgf2 |
fibroblast growth factor 2 |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:29501879) |
UniProt RGD |
PMID:29501879 |
GO_REF:0000024 |
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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G |
Zeb2 |
zinc finger E-box binding homeobox 2 |
involved_in |
ISO |
(MGI:3604916|PMID:16162653) |
RGD |
PMID:16162653 |
MGI:3604916 |
NCBI chr 3:29,219,765...29,342,094
Ensembl chr 3:29,218,301...29,345,157
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G |
Casp6 |
caspase 6 |
|
IMP |
|
RGD |
PMID:12917395 |
RGD:2301324 |
NCBI chr 2:218,466,063...218,478,503
Ensembl chr 2:218,466,076...218,478,502
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G |
Bcl11b |
BCL11 transcription factor B |
acts_upstream_of_or_within |
ISO |
MGI:2663971 (MGI:2662810|PMID:12717433) |
RGD |
PMID:12717433 |
MGI:2662810 |
NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
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G |
Fzd5 |
frizzled class receptor 5 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:3826935|PMID:18832390) MGI:3574771|MGI:3583769 (MGI:3821812|PMID:18791178) |
Ensembl RGD |
PMID:18791178 PMID:18832390 |
GO_REF:0000107 MGI:3821812 MGI:3826935 |
NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
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G |
Klf4 |
KLF transcription factor 4 |
acts_upstream_of_or_within |
ISO |
MGI:2183917|MGI:3045749 (MGI:3697243|PMID:17060454) |
RGD |
PMID:17060454 |
MGI:3697243 |
NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
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G |
Muc4 |
mucin 4, cell surface associated |
|
IEP |
|
RGD |
PMID:11120573 |
RGD:2303744 |
NCBI chr11:68,008,245...68,053,229
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G |
Vegfa |
vascular endothelial growth factor A |
acts_upstream_of_or_within |
ISO |
MGI:1931047 (MGI:1339868|PMID:10229225) |
RGD |
PMID:10229225 |
MGI:1339868 |
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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G |
Bak1 |
BCL2-antagonist/killer 1 |
acts_upstream_of_or_within |
ISO |
MGI:99702 (MGI:3692135|PMID:15955981) |
RGD |
PMID:15955981 |
MGI:3692135 |
NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
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G |
Bax |
BCL2 associated X, apoptosis regulator |
acts_upstream_of_or_within |
ISO |
MGI:1097161 (MGI:3692135|PMID:15955981) |
RGD |
PMID:15955981 |
MGI:3692135 |
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
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G |
Flt1 |
Fms related receptor tyrosine kinase 1 |
acts_upstream_of_or_within |
ISO |
MGI:96683 (MGI:5318610|PMID:22426483) |
RGD |
PMID:22426483 |
MGI:5318610 |
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
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G |
Hmgn1 |
high mobility group nucleosome binding domain 1 |
acts_upstream_of_or_within |
ISO |
MGI:3590648 (MGI:3614611|PMID:16466397) |
RGD |
PMID:16466397 |
MGI:3614611 |
NCBI chr11:35,422,328...35,428,247
Ensembl chr11:35,422,328...35,428,254
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G |
Kdr |
kinase insert domain receptor |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:95558 (MGI:5318610|PMID:22426483) GO_REF:0000107 |
RGD Ensembl |
PMID:22426483 |
GO_REF:0000107 MGI:5318610 |
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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G |
Mir23a |
microRNA 23a |
acts_upstream_of_or_within |
ISO |
(MGI:5516374|PMID:24101522) |
RGD |
PMID:24101522 |
MGI:5516374 |
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
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G |
Bhlhe23 |
basic helix-loop-helix family, member e23 |
acts_upstream_of_or_within |
ISO |
MGI:3054837 (MGI:3054140|PMID:15363390) |
RGD |
PMID:15363390 |
MGI:3054140 |
NCBI chr 3:167,889,009...167,891,223
Ensembl chr 3:167,889,009...167,891,223
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G |
Efemp1 |
EGF containing fibulin extracellular matrix protein 1 |
involved_in |
ISO |
(PMID:25406291) |
RGD |
PMID:25406291 |
|
NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018
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G |
Fbn1 |
fibrillin 1 |
involved_in |
ISO |
(PMID:25406291) |
RGD |
PMID:25406291 |
|
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
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G |
Mfap2 |
microfibril associated protein 2 |
involved_in |
ISO |
(PMID:25406291) |
RGD |
PMID:25406291 |
|
NCBI chr 5:153,312,068...153,320,266
Ensembl chr 5:153,314,711...153,320,259
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G |
Ccdc66 |
coiled-coil domain containing 66 |
acts_upstream_of_or_within |
ISO |
MGI:3893603 (MGI:5141557|PMID:21680557) |
RGD |
PMID:21680557 |
MGI:5141557 |
NCBI chr16:2,662,125...2,694,031
Ensembl chr16:2,662,131...2,694,023
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G |
Crb1 |
crumbs cell polarity complex component 1 |
acts_upstream_of_or_within involved_in |
ISO |
(MGI:3051713|PMID:15316081), (MGI:3690408|PMID:16885194) (MGI:2675211|PMID:12915475) |
RGD |
PMID:12915475 PMID:15316081 PMID:16885194 |
MGI:2675211 MGI:3051713 MGI:3690408 |
NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
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|
G |
Dscam |
DS cell adhesion molecule |
acts_upstream_of_or_within |
ISO |
MGI:3761008 (MGI:3768917|PMID:18216855) |
RGD |
PMID:18216855 |
MGI:3768917 |
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
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|
G |
Grk1 |
G protein-coupled receptor kinase 1 |
acts_upstream_of_or_within |
ISO |
MGI:2668595 (MGI:1334014|PMID:10097103) |
RGD |
PMID:10097103 |
MGI:1334014 |
NCBI chr16:76,122,501...76,135,792
Ensembl chr16:76,123,842...76,135,792
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|
|
G |
Cdkn1b |
cyclin-dependent kinase inhibitor 1B |
acts_upstream_of_or_within |
ISO |
MGI:104564 (MGI:1309707|PMID:9784491) |
RGD |
PMID:9784491 |
MGI:1309707 |
NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982
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|
G |
Cdkn1c |
cyclin-dependent kinase inhibitor 1C |
acts_upstream_of_or_within |
ISO |
MGI:104565 (MGI:1309707|PMID:9784491) |
RGD |
PMID:9784491 |
MGI:1309707 |
NCBI chr 1:198,655,394...198,658,097
Ensembl chr 1:198,655,407...198,658,048
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G |
Dll4 |
delta like canonical Notch ligand 4 |
involved_in |
ISO |
(MGI:5314555|PMID:22323600) |
RGD |
PMID:22323600 |
MGI:5314555 |
NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
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|
G |
Ptf1a |
pancreas associated transcription factor 1a |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3691257|PMID:17075007) |
UniProt RGD |
PMID:17075007 |
GO_REF:0000024 MGI:3691257 |
NCBI chr17:82,051,281...82,053,135
Ensembl chr17:82,051,281...82,053,135
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|
G |
Six3 |
SIX homeobox 3 |
involved_in |
ISO |
(MGI:4837018|PMID:20890044) |
RGD |
PMID:20890044 |
MGI:4837018 |
NCBI chr 6:9,040,123...9,043,336
Ensembl chr 6:9,036,434...9,053,301
|
|
|
G |
Celf4 |
CUGBP, Elav-like family member 4 |
acts_upstream_of_or_within |
ISO |
(MGI:5523751|PMID:23932931) |
RGD |
PMID:23932931 |
MGI:5523751 |
NCBI chr18:16,786,578...17,065,045
Ensembl chr18:16,786,867...17,064,786
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|
|
G |
Bdnf |
brain-derived neurotrophic factor |
acts_upstream_of_or_within |
ISO |
(MGI:2155023|PMID:11747369) |
RGD |
PMID:11747369 |
MGI:2155023 |
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
|
|
G |
Cntf |
ciliary neurotrophic factor |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:2155023|PMID:11747369) |
Ensembl RGD |
PMID:11747369 |
GO_REF:0000107 MGI:2155023 |
NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
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G |
Fgf2 |
fibroblast growth factor 2 |
acts_upstream_of_or_within |
ISO |
(MGI:2155023|PMID:11747369) |
RGD |
PMID:11747369 |
MGI:2155023 |
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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|
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G |
Ache |
acetylcholinesterase |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:2179948 (MGI:3603700|PMID:15579149) |
Ensembl RGD |
PMID:15579149 |
GO_REF:0000107 MGI:3603700 |
NCBI chr12:19,407,359...19,413,713
Ensembl chr12:19,407,360...19,413,651
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G |
Actb |
actin, beta |
|
IEP |
|
RGD |
PMID:22916200 |
RGD:9587758 |
NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
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|
G |
Agtpbp1 |
ATP/GTP binding carboxypeptidase 1 |
acts_upstream_of_or_within |
ISO |
MGI:1856535 (MGI:4849309|PMID:21052544), (MGI:5754679|PMID:24791901) |
RGD |
PMID:21052544 PMID:24791901 |
MGI:4849309 MGI:5754679 |
NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
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G |
Ahi1 |
Abelson helper integration site 1 |
acts_upstream_of_or_within |
ISO |
MGI:4360696 (MGI:4461813|PMID:20592197) |
RGD |
PMID:20592197 |
MGI:4461813 |
NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041
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G |
Apc |
APC regulator of WNT signaling pathway |
acts_upstream_of_or_within |
ISO |
MGI:1857951 (MGI:3699582|PMID:10982921) |
RGD |
PMID:10982921 |
MGI:3699582 |
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
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G |
Bax |
BCL2 associated X, apoptosis regulator |
acts_upstream_of_or_within |
ISO |
MGI:1857429 (MGI:1277631|PMID:9699561) |
RGD |
PMID:9699561 |
MGI:1277631 |
NCBI chr 1:95,940,001...95,945,407
Ensembl chr 1:95,938,808...95,945,368
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G |
Bmp4 |
bone morphogenetic protein 4 |
|
IEP |
|
RGD |
PMID:17069773 |
RGD:2289001 |
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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|
G |
Bmpr1b |
bone morphogenetic protein receptor type 1B |
acts_upstream_of_or_within |
ISO |
MGI:2158497 (MGI:2654391|PMID:12654290) |
RGD |
PMID:12654290 |
MGI:2654391 |
NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
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G |
Bmpr2 |
bone morphogenetic protein receptor type 2 |
|
IEP |
|
RGD |
PMID:10482474 |
RGD:5129487 |
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
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G |
C3 |
complement C3 |
acts_upstream_of_or_within |
ISO |
(MGI:5883383|PMID:28057640) |
RGD |
PMID:28057640 |
MGI:5883383 |
NCBI chr 9:2,087,437...2,114,366
Ensembl chr 9:2,087,437...2,114,429
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|
G |
Cacna1f |
calcium voltage-gated channel subunit alpha1 F |
acts_upstream_of_or_within |
ISO |
MGI:3605845 (MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr X:14,868,096...14,896,413
Ensembl chr X:14,868,024...14,896,413
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|
G |
Calb1 |
calbindin 1 |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:10741426) (MGI:1353814|PMID:10741426) |
RGD |
PMID:10741426 |
MGI:1353814 |
NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
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G |
Cep290 |
centrosomal protein 290 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 7:35,310,071...35,399,392
Ensembl chr 7:35,310,199...35,399,392
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G |
Cfd |
complement factor D |
acts_upstream_of_or_within |
ISO |
(MGI:5883383|PMID:28057640) |
RGD |
PMID:28057640 |
MGI:5883383 |
NCBI chr 7:9,813,148...9,814,871
Ensembl chr 7:9,813,150...9,815,053
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|
G |
Cfh |
complement factor H |
acts_upstream_of_or_within_positive_effect |
ISO |
(MGI:6304909|PMID:30705315) (MGI:3760334|PMID:17921253), (MGI:5883383|PMID:28057640) |
RGD |
PMID:17921253 PMID:28057640 PMID:30705315 |
MGI:3760334 MGI:5883383 MGI:6304909 |
NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838
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|
G |
Chd7 |
chromodomain helicase DNA binding protein 7 |
involved_in |
ISO |
(PMID:15300250) |
RGD |
PMID:15300250 |
|
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
|
|
G |
Clcn2 |
chloride voltage-gated channel 2 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr11:80,197,741...80,211,657
Ensembl chr11:80,198,153...80,211,657
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|
G |
Cln8 |
CLN8, transmembrane ER and ERGIC protein |
acts_upstream_of_or_within |
ISO |
MGI:1856959 (MGI:3695117|PMID:15565184), (MGI:4849309|PMID:21052544) |
RGD |
PMID:15565184 PMID:21052544 |
MGI:3695117 MGI:4849309 |
NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
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G |
Crb1 |
crumbs cell polarity complex component 1 |
acts_upstream_of_or_within |
ISO |
(MGI:5315300|PMID:22447858), (MGI:5608935|PMID:25147295) |
RGD |
PMID:22447858 PMID:25147295 |
MGI:5315300 MGI:5608935 |
NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
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G |
Crx |
cone-rod homeobox |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 1:76,540,141...76,545,818
Ensembl chr 1:76,540,141...76,545,818
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G |
Dclk1 |
doublecortin-like kinase 1 |
involved_in |
IEA |
GO_REF:0000002 |
InterPro |
|
GO_REF:0000002 |
NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
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G |
Dcx |
doublecortin |
involved_in |
IBA IEA |
PMID:21873635 GO_REF:0000002 |
InterPro |
PMID:21873635 |
GO_REF:0000002, RGD:13792537 |
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
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G |
Dll1 |
delta like canonical Notch ligand 1 |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:3848562|PMID:19389377) |
UniProt RGD |
PMID:19389377 |
GO_REF:0000024 MGI:3848562 |
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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G |
Drd4 |
dopamine receptor D4 |
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IEP |
|
RGD |
PMID:18778704 |
RGD:7175073 |
NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553
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G |
Dtnbp1 |
dystrobrevin binding protein 1 |
|
IEP |
|
RGD |
PMID:23954924 |
RGD:11251759 |
NCBI chr17:19,685,218...19,776,668
Ensembl chr17:19,685,215...19,776,661
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G |
Gdnf |
glial cell derived neurotrophic factor |
|
IEP |
|
RGD |
PMID:16650834 |
RGD:2324945 |
NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
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|
G |
Gnat1 |
G protein subunit alpha transducin 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 8:108,350,935...108,355,671
Ensembl chr 8:108,350,935...108,355,671
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G |
Gnb1 |
G protein subunit beta 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 5:166,075,508...166,142,223
Ensembl chr 5:166,075,629...166,142,124
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G |
Grm6 |
glutamate metabotropic receptor 6 |
acts_upstream_of_or_within |
ISO |
MGI:3605835 (MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr10:35,167,985...35,182,717
Ensembl chr10:35,167,985...35,182,717
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G |
Grn |
granulin precursor |
acts_upstream_of_or_within |
ISO |
MGI:3762618 (MGI:6101836|PMID:28728022) |
RGD |
PMID:28728022 |
MGI:6101836 |
NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
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G |
Hpca |
hippocalcin |
|
IEP |
|
RGD |
PMID:7789406 |
RGD:9686441 |
NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841
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|
G |
Hps1 |
HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 1:241,551,180...241,577,292
Ensembl chr 1:241,551,175...241,577,268
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|
G |
Ikzf1 |
IKAROS family zinc finger 1 |
acts_upstream_of_or_within |
ISO |
MGI:2158690 (MGI:3831471|PMID:18940586) |
RGD |
PMID:18940586 |
MGI:3831471 |
NCBI chr14:86,255,065...86,340,839
Ensembl chr14:86,255,065...86,342,416
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G |
Il4 |
interleukin 4 |
|
IEP |
|
RGD |
PMID:23070471 |
RGD:7829830 |
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
|
|
G |
Impdh1 |
inosine monophosphate dehydrogenase 1 |
|
IEP |
|
RGD |
PMID:18295529 |
RGD:5144133 |
NCBI chr 4:57,801,842...57,817,434
Ensembl chr 4:57,801,831...57,819,076
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G |
Impdh2 |
inosine monophosphate dehydrogenase 2 |
|
IEP |
|
RGD |
PMID:18295529 |
RGD:5144133 |
NCBI chr 8:109,256,705...109,261,365
Ensembl chr 8:109,256,728...109,261,359
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|
G |
Jmjd6 |
jumonji domain containing 6, arginine demethylase and lysine hydroxylase |
acts_upstream_of_or_within |
ISO |
MGI:3580706 (MGI:3580691|PMID:15345036) |
RGD |
PMID:15345036 |
MGI:3580691 |
NCBI chr10:102,041,131...102,047,182
Ensembl chr10:102,041,120...102,047,182
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|
G |
Lama1 |
laminin subunit alpha 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
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|
G |
Lamb2 |
laminin subunit beta 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:1344394 (MGI:4454394|PMID:19907020) |
Ensembl RGD |
PMID:19907020 |
GO_REF:0000107 MGI:4454394 |
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
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|
G |
Lamc3 |
laminin subunit gamma 3 |
acts_upstream_of_or_within |
ISO |
MGI:99916 (MGI:4454394|PMID:19907020) |
RGD |
PMID:19907020 |
MGI:4454394 |
NCBI chr 3:15,165,220...15,226,697
Ensembl chr 3:15,165,220...15,226,697
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|
G |
Lhx1 |
LIM homeobox 1 |
acts_upstream_of_or_within involved_in |
ISO |
(PMID:10741426) (MGI:1353814|PMID:10741426) |
RGD |
PMID:10741426 |
MGI:1353814 |
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
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|
G |
Lhx2 |
LIM homeobox 2 |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 MGI:97490 (MGI:3836385|PMID:19146846) |
Ensembl RGD |
PMID:19146846 |
GO_REF:0000107 MGI:3836385 |
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
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G |
Lif |
LIF, interleukin 6 family cytokine |
|
IDA |
|
RGD |
PMID:16643897 |
RGD:2326157 |
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
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|
G |
Lpcat1 |
lysophosphatidylcholine acyltransferase 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 1:29,766,070...29,816,401
Ensembl chr 1:29,766,071...29,816,401
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G |
Max |
MYC associated factor X |
|
IEP |
|
RGD |
PMID:14603520 |
RGD:2316820 |
NCBI chr 6:95,636,857...95,662,204
Ensembl chr 6:95,636,858...95,662,137
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|
G |
Mdm1 |
Mdm1 nuclear protein |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 MGI:2664154 (MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 PMID:21873635 |
MGI:4849309, RGD:13792537 |
NCBI chr 7:53,729,603...53,766,034
Ensembl chr 7:53,729,610...53,766,034
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|
G |
Mertk |
MER proto-oncogene, tyrosine kinase |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 3:115,939,351...116,045,141
Ensembl chr 3:115,939,351...116,046,554
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|
G |
Mfrp |
membrane frizzled-related protein |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 8:44,445,636...44,450,859
Ensembl chr 8:44,445,697...44,450,859
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|
G |
Mir183 |
microRNA 183 |
acts_upstream_of_or_within |
ISO |
MGI:2676846|MGI:3619440 (MGI:5469752|PMID:23341629), (MGI:6108693|PMID:28819115) |
RGD |
PMID:23341629 PMID:28819115 |
MGI:5469752 MGI:6108693 |
NCBI chr 4:58,788,614...58,788,723
Ensembl chr 4:58,788,614...58,788,723
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|
G |
Mir96 |
microRNA 96 |
acts_upstream_of_or_within |
ISO |
MGI:2676846|MGI:2676847 (MGI:5469752|PMID:23341629), (MGI:6108693|PMID:28819115) |
RGD |
PMID:23341629 PMID:28819115 |
MGI:5469752 MGI:6108693 |
NCBI chr 4:58,788,411...58,788,516
Ensembl chr 4:58,788,411...58,788,516
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G |
Musk |
muscle associated receptor tyrosine kinase |
|
IEP |
|
RGD |
PMID:16899069 |
RGD:2317091 |
NCBI chr 5:73,058,427...73,169,696
Ensembl chr 5:73,058,121...73,171,932
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|
G |
Myh10 |
myosin heavy chain 10 |
acts_upstream_of_or_within |
ISO |
MGI:2386445 (MGI:1099556|PMID:9356462), (MGI:1933038|PMID:11283949) |
RGD |
PMID:9356462 PMID:11283949 |
MGI:1099556 MGI:1933038 |
NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
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|
G |
Naglu |
N-acetyl-alpha-glucosaminidase |
acts_upstream_of_or_within |
ISO |
MGI:1934018 (MGI:6219748|PMID:26607664) |
RGD |
PMID:26607664 |
MGI:6219748 |
NCBI chr10:86,001,545...86,009,049
Ensembl chr10:86,001,566...86,008,972
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|
G |
Ndp |
norrin cystine knot growth factor NDP |
acts_upstream_of_or_within |
ISO |
MGI:2676199 (MGI:3655326|PMID:9071226) |
RGD |
PMID:9071226 |
MGI:3655326 |
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
|
|
G |
Nectin1 |
nectin cell adhesion molecule 1 |
acts_upstream_of_or_within |
ISO |
MGI:3605480 (MGI:3604842|PMID:15728677) |
RGD |
PMID:15728677 |
MGI:3604842 |
NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
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|
G |
Neurod4 |
neuronal differentiation 4 |
|
IEP |
|
RGD |
PMID:15345241 |
RGD:2311603 |
NCBI chr 7:7,090,048...7,102,018
Ensembl chr 7:7,090,045...7,102,030
|
|
G |
Nfia |
nuclear factor I/A |
acts_upstream_of_or_within |
ISO |
MGI:6280648 (MGI:6355635|PMID:31128945) |
RGD |
PMID:31128945 |
MGI:6355635 |
NCBI chr 5:112,436,655...112,781,878
Ensembl chr 5:112,436,644...112,775,885
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|
G |
Nfib |
nuclear factor I/B |
acts_upstream_of_or_within |
ISO |
MGI:5052268 (MGI:6355635|PMID:31128945) |
RGD |
PMID:31128945 |
MGI:6355635 |
NCBI chr 5:96,759,208...96,973,092
Ensembl chr 5:96,764,653...96,975,479
|
|
G |
Nfix |
nuclear factor I X |
acts_upstream_of_or_within |
ISO |
MGI:3802570 (MGI:6355635|PMID:31128945) |
RGD |
PMID:31128945 |
MGI:6355635 |
NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265
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G |
Nos3 |
nitric oxide synthase 3 |
|
IEP |
|
RGD |
PMID:16639026 |
RGD:7771562 |
NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166
|
|
G |
Nphp1 |
nephrocystin 1 |
involved_in |
ISO |
(MGI:3839506|PMID:19208653) |
RGD |
PMID:19208653 |
MGI:3839506 |
NCBI chr 3:114,960,650...115,016,234
Ensembl chr 3:114,960,650...115,016,234
|
|
G |
Nphp4 |
nephrocystin 4 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706
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|
G |
Nr2e1 |
nuclear receptor subfamily 2, group E, member 1 |
acts_upstream_of_or_within |
ISO |
MGI:2176490|MGI:2176560 (MGI:2151063|PMID:11997145), (MGI:3624573|PMID:16702404) |
RGD |
PMID:11997145 PMID:16702404 |
MGI:2151063 MGI:3624573 |
NCBI chr20:46,050,134...46,070,569
Ensembl chr20:46,050,414...46,073,949
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|
G |
Nr2e3 |
nuclear receptor subfamily 2, group E, member 3 |
acts_upstream_of_or_within |
ISO |
MGI:1346317 (MGI:3624051|PMID:12407160), (MGI:4849309|PMID:21052544) |
RGD |
PMID:12407160 PMID:21052544 |
MGI:3624051 MGI:4849309 |
NCBI chr 8:60,365,581...60,373,383
Ensembl chr 8:60,366,124...60,373,163
|
|
G |
Nr4a2 |
nuclear receptor subfamily 4, group A, member 2 |
|
IEP |
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RGD |
PMID:22714110 |
RGD:124713571 |
NCBI chr 3:41,689,847...41,707,036
Ensembl chr 3:41,689,851...41,697,877
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G |
Ntrk2 |
neurotrophic receptor tyrosine kinase 2 |
acts_upstream_of_or_within |
ISO |
(MGI:5619875|PMID:25542970) |
RGD |
PMID:25542970 |
MGI:5619875 |
NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
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G |
Opa1 |
OPA1, mitochondrial dynamin like GTPase |
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IEP |
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RGD |
PMID:15505078 |
RGD:1547836 |
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
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G |
Pax4 |
paired box 4 |
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IEP |
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RGD |
PMID:19012751 |
RGD:2311636 |
NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408
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G |
Pax6 |
paired box 6 |
acts_upstream_of_or_within involved_in |
IEP ISO IEA |
MGI:96785 (MGI:3836385|PMID:19146846) GO_REF:0000107 |
RGD Ensembl |
PMID:19146846 PMID:19012751 |
GO_REF:0000107 MGI:3836385, RGD:2311636 |
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
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G |
Pde6a |
phosphodiesterase 6A |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 PMID:21873635 |
MGI:4849309, RGD:13792537 |
NCBI chr18:54,676,863...54,749,644
Ensembl chr18:54,676,863...54,748,816
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G |
Pde6b |
phosphodiesterase 6B |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 PMID:21873635 |
MGI:4849309, RGD:13792537 |
NCBI chr14:1,323,310...1,366,450
Ensembl chr14:1,323,310...1,366,450
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G |
Pdgfb |
platelet derived growth factor subunit B |
acts_upstream_of_or_within |
ISO |
MGI:2670574 (MGI:5607451|PMID:25224828) |
RGD |
PMID:25224828 |
MGI:5607451 |
NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
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G |
Pfdn5 |
prefoldin subunit 5 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 7:133,451,778...133,456,516
Ensembl chr 7:133,451,453...133,456,516
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G |
Pou4f2 |
POU class 4 homeobox 2 |
acts_upstream_of_or_within |
ISO |
MGI:2176272|MGI:3582493 (MGI:3621691|PMID:9630743), (MGI:80981|PMID:8637595) |
RGD |
PMID:8637595 PMID:9630743 |
MGI:3621691 MGI:80981 |
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
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G |
Prph2 |
peripherin 2 |
acts_upstream_of_or_within |
ISO |
MGI:1856523|MGI:6367794|MGI:97998 (MGI:3610839|PMID:15964665), (MGI:4849309|PMID:21052544), (MGI:5905515|PMID:28053051) |
RGD |
PMID:15964665 PMID:21052544 PMID:28053051 |
MGI:3610839 MGI:4849309 MGI:5905515 |
NCBI chr 9:14,066,149...14,081,454
Ensembl chr 9:14,066,156...14,081,454
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G |
Ptn |
pleiotrophin |
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IEP |
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RGD |
PMID:16914133 PMID:8453763 |
RGD:9831439, RGD:9831456 |
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
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G |
Rarb |
retinoic acid receptor, beta |
acts_upstream_of_or_within |
ISO |
MGI:97858 (MGI:81656|PMID:8681798) |
RGD |
PMID:8681798 |
MGI:81656 |
NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
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G |
Rarg |
retinoic acid receptor, gamma |
acts_upstream_of_or_within |
ISO |
MGI:97857 (MGI:81656|PMID:8681798) |
RGD |
PMID:8681798 |
MGI:81656 |
NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
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G |
Rbp4 |
retinol binding protein 4 |
acts_upstream_of_or_within |
ISO |
MGI:2445721 (MGI:2150869|PMID:11562477) |
RGD |
PMID:11562477 |
MGI:2150869 |
NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399
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G |
Rd3 |
RD3 regulator of GUCY2D |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:4849309|PMID:21052544) (MGI:52860|PMID:8486383) |
RGD |
PMID:8486383 PMID:21052544 PMID:21873635 |
MGI:4849309 MGI:52860, RGD:13792537 |
NCBI chr13:103,551,823...103,562,925
Ensembl chr13:103,552,857...103,562,622
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G |
Ret |
ret proto-oncogene |
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IEP |
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RGD |
PMID:16650834 |
RGD:2324945 |
NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176
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G |
Rho |
rhodopsin |
involved_in acts_upstream_of_or_within |
IEA ISO |
GO_REF:0000107 (MGI:4849309|PMID:21052544) |
Ensembl RGD |
PMID:21052544 |
GO_REF:0000107 MGI:4849309 |
NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
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G |
Rnpep |
arginyl aminopeptidase |
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IEP |
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RGD |
PMID:15500823 |
RGD:2325937 |
NCBI chr13:46,699,458...46,717,829
Ensembl chr13:46,699,463...46,717,998
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G |
Rom1 |
retinal outer segment membrane protein 1 |
acts_upstream_of_or_within |
ISO |
MGI:102791|MGI:2181662 (MGI:5905515|PMID:28053051) |
RGD |
PMID:28053051 |
MGI:5905515 |
NCBI chr 1:205,824,050...205,826,058
Ensembl chr 1:205,824,052...205,826,175
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G |
Rorb |
RAR-related orphan receptor B |
involved_in |
ISS ISO |
GO_REF:0000024 (MGI:5546314|PMID:23652001) |
UniProt RGD |
PMID:23652001 |
GO_REF:0000024 MGI:5546314 |
NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390
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G |
Rp1 |
RP1, axonemal microtubule associated |
involved_in acts_upstream_of_or_within |
IBA ISO |
PMID:21873635 (MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 PMID:21873635 |
MGI:4849309, RGD:13792537 |
NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363
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G |
Rp1l1 |
RP1 like 1 |
involved_in |
IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr15:38,259,595...38,271,269
Ensembl chr15:38,259,928...38,270,316
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G |
Rpe65 |
retinoid isomerohydrolase RPE65 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403
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G |
Rpgrip1 |
RPGR interacting protein 1 |
acts_upstream_of_or_within |
ISO |
(MGI:4849309|PMID:21052544) |
RGD |
PMID:21052544 |
MGI:4849309 |
NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605
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G |
Rpl24 |
ribosomal protein L24 |
acts_upstream_of_or_within |
ISO |
MGI:1856685 (MGI:1097191|PMID:9331275), (MGI:1332363|PMID:10049578) |
RGD |
PMID:9331275 PMID:10049578 |
MGI:1097191 MGI:1332363 |
NCBI chr11:44,653,937...44,659,346
Ensembl chr11:44,653,937...44,659,370
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G |
Rrm1 |
ribonucleotide reductase catalytic subunit M1 |
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IEP |
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RGD |
PMID:2647502 |
RGD:5133699 |
NCBI chr 1:156,823,960...156,848,262
Ensembl chr 1:156,823,960...156,848,261
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G |
Scaper |
S-phase cyclin A-associated protein in the ER |
acts_upstream_of_or_within |
ISO |
(PMID:28794130) |
RGD |
PMID:28794130 |
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NCBI chr 8:55,932,717...56,332,222
Ensembl chr 8:55,933,306...56,332,122
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G |
Serpinf1 |
serpin family F member 1 |
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IEP |
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RGD |
PMID:21738387 |
RGD:8655555 |
NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
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G |
Ski |
Ski proto-oncogene |
acts_upstream_of_or_within |
ISO |
MGI:2177555 (MGI:3693412|PMID:17003410) |
RGD |
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