ONTOLOGY REPORT - ANNOTATIONS
Term: endolysosomal toll-like receptor signaling pathway
Accession: GO:0140894
browse the term
Definition: The series of molecular signals initiated by a ligand binding to an endolysosomal pattern recognition receptor (PRR) of the toll-like family. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.
Synonyms: exact_synonym: endolysosomal pattern recognition receptor signaling pathway
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Washc4
WASH complex subunit 4
acts_upstream_of_or_within
ISO
(PMID:33749590)
RGD
PMID:33749590
NCBI chr 7:20,187,905...20,240,228
Ensembl chr 7:20,187,922...20,240,226
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F2rl1
F2R like trypsin receptor 1
involved_in
ISO IEA
(PMID:19865078) GO_REF:0000107
RGD Ensembl
PMID:19865078
GO_REF:0000107
NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
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Tnfaip3
TNF alpha induced protein 3
involved_in
ISO IEA
(PMID:15474016) GO_REF:0000107
RGD Ensembl
PMID:15474016
GO_REF:0000107
NCBI chr 1:15,528,921...15,543,993
Ensembl chr 1:13,709,206...13,725,282
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Ubqln1
ubiquilin 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:21695056)
Ensembl RGD
PMID:21695056
GO_REF:0000107
NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
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Gramd4
GRAM domain containing 4
involved_in
IBA ISO
GO_REF:0000033 (PMID:25917084)
GO_Central RGD
PMID:25917084
GO_REF:0000033
NCBI chr 7:117,150,398...117,224,056
Ensembl chr 7:117,150,374...117,224,053
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Ppt1
palmitoyl-protein thioesterase 1
involved_in
ISO IEA
(PMID:14716310) GO_REF:0000107
RGD Ensembl
PMID:14716310
GO_REF:0000107
NCBI chr 5:135,121,164...135,142,048
Ensembl chr 5:135,121,163...135,142,048
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Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in
ISO
(PMID:26231120)
RGD
PMID:26231120
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
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Rab7b
Rab7b, member RAS oncogene family
involved_in
ISO IEA
(PMID:19587007) GO_REF:0000107
RGD Ensembl
PMID:19587007
GO_REF:0000107
NCBI chr13:43,121,168...43,147,581
Ensembl chr13:43,121,226...43,147,581
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Treml4
triggering receptor expressed on myeloid cells-like 4
involved_in
ISO
(PMID:25848864)
RGD
PMID:25848864
NCBI chr 9:12,718,968...12,743,879
Ensembl chr 9:12,721,815...12,743,253
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Cav1
caveolin 1
involved_in
ISO IEA
(PMID:25204797) GO_REF:0000107
RGD Ensembl
PMID:25204797
GO_REF:0000107
NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
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F2rl1
F2R like trypsin receptor 1
involved_in
ISO IEA
(PMID:19865078) GO_REF:0000107
RGD Ensembl
PMID:19865078
GO_REF:0000107
NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
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Flot1
flotillin 1
involved_in
ISO IEA
(PMID:25204797) GO_REF:0000107
RGD Ensembl
PMID:25204797
GO_REF:0000107
NCBI chr20:2,917,864...2,927,993
Ensembl chr20:2,917,137...2,927,978
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Peli1
pellino E3 ubiquitin protein ligase 1
acts_upstream_of_or_within
ISO IEA
MGI:4361448 (PMID:19734906) GO_REF:0000107
RGD Ensembl
PMID:19734906
GO_REF:0000107
NCBI chr14:99,455,970...99,510,474
Ensembl chr14:95,254,589...95,308,285 Ensembl chr 1:95,254,589...95,308,285
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Ptpn22
protein tyrosine phosphatase, non-receptor type 22
involved_in
ISO
(PMID:23871208)
RGD
PMID:23871208
NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
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Tirap
TIR domain containing adaptor protein
involved_in
ISO
(PMID:17322885)
RGD
PMID:17322885
NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
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Trim3
tripartite motif-containing 3
involved_in
IEA ISO
GO_REF:0000107 (PMID:32878999)
Ensembl RGD
PMID:32878999
GO_REF:0000107
NCBI chr 1:169,362,751...169,385,430
Ensembl chr 1:159,944,908...159,973,600
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Wdfy1
WD repeat and FYVE domain containing 1
involved_in
ISO IEA IBA
(PMID:25736436) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:25736436
GO_REF:0000033 GO_REF:0000107
NCBI chr 9:81,034,852...81,092,823
Ensembl chr 9:81,034,849...81,092,775
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Ddx3x
DEAD-box helicase 3, X-linked
involved_in
ISO
(PMID:30341167)
RGD
PMID:30341167
NCBI chr X:9,479,532...9,493,169
Ensembl chr X:9,479,532...9,493,168
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Ptpn22
protein tyrosine phosphatase, non-receptor type 22
involved_in
ISO
(PMID:23871208)
RGD
PMID:23871208
NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
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Rsad2
radical S-adenosyl methionine domain containing 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:21435586) GO_REF:0000107
UniProt RGD Ensembl
PMID:21435586
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:43,046,514...43,059,737
Ensembl chr 6:43,047,658...43,059,699
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Slc15a4
solute carrier family 15 member 4
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:21045126), (PMID:25238095) GO_REF:0000024 (PMID:25238095), (PMID:32433612)
Ensembl RGD UniProt
PMID:21045126 PMID:25238095 PMID:32433612
GO_REF:0000024 GO_REF:0000107
NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
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Tasl
TLR adaptor interacting with endolysosomal SLC15A4
involved_in
ISO IEA
(PMID:32433612) GO_REF:0000107
RGD Ensembl
PMID:32433612
GO_REF:0000107
NCBI chr X:50,403,962...50,423,141
Ensembl chr X:50,361,248...50,423,269
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Treml4
triggering receptor expressed on myeloid cells-like 4
involved_in
ISO IBA
(PMID:25848864) GO_REF:0000033
RGD GO_Central
PMID:25848864
GO_REF:0000033
NCBI chr 9:12,718,968...12,743,879
Ensembl chr 9:12,721,815...12,743,253
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Ddx3x
DEAD-box helicase 3, X-linked
involved_in
ISO
(PMID:30341167)
RGD
PMID:30341167
NCBI chr X:9,479,532...9,493,169
Ensembl chr X:9,479,532...9,493,168
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Slc15a4
solute carrier family 15 member 4
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:32433612)
Ensembl UniProt RGD
PMID:32433612
GO_REF:0000024 GO_REF:0000107
NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
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Tasl
TLR adaptor interacting with endolysosomal SLC15A4
involved_in
ISO IEA
(PMID:32433612) GO_REF:0000107
RGD Ensembl
PMID:32433612
GO_REF:0000107
NCBI chr X:50,403,962...50,423,141
Ensembl chr X:50,361,248...50,423,269
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Hmgb1
high mobility group box 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Ptpn22
protein tyrosine phosphatase, non-receptor type 22
involved_in
ISO
(PMID:23871208)
RGD
PMID:23871208
NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
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Rsad2
radical S-adenosyl methionine domain containing 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:21435586)
UniProt Ensembl RGD
PMID:21435586
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:43,046,514...43,059,737
Ensembl chr 6:43,047,658...43,059,699
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Rtn4
reticulon 4
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:25917084)
UniProt Ensembl RGD
PMID:25917084
GO_REF:0000024 GO_REF:0000107
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
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Slc15a4
solute carrier family 15 member 4
involved_in
ISO IEA ISS
(PMID:25238095) GO_REF:0000107 GO_REF:0000024 (PMID:21045126), (PMID:21277849), (PMID:25238095)
RGD Ensembl UniProt
PMID:21045126 PMID:21277849 PMID:25238095
GO_REF:0000024 GO_REF:0000107
NCBI chr12:29,048,634...29,082,480
Ensembl chr12:29,063,015...29,082,480
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Tlr9
toll-like receptor 9
involved_in
ISO IEA
(PMID:18931679) GO_REF:0000107
RGD Ensembl
PMID:18931679
GO_REF:0000107
NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
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Treml4
triggering receptor expressed on myeloid cells-like 4
involved_in
ISO
(PMID:25848864)
RGD
PMID:25848864
NCBI chr 9:12,718,968...12,743,879
Ensembl chr 9:12,721,815...12,743,253
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Zdhhc3
zinc finger DHHC-type palmitoyltransferase 3
involved_in
ISO IEA
(PMID:38169466) GO_REF:0000107
RGD Ensembl
PMID:38169466
GO_REF:0000107
NCBI chr 8:131,602,663...131,650,998
Ensembl chr 8:122,715,111...122,773,529
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Flot2
flotillin 2
NOT|involved_in
ISO
(PMID:25204797)
RGD
PMID:25204797
NCBI chr10:62,926,047...62,947,759
Ensembl chr10:62,920,665...62,947,756
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Hcfc2
host cell factor C2
acts_upstream_of_or_within
ISO
MGI:5445585 (PMID:28970238)
RGD
PMID:28970238
NCBI chr 7:20,983,986...21,019,826
Ensembl chr 7:20,991,017...21,019,801
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Src
SRC proto-oncogene, non-receptor tyrosine kinase
involved_in
ISO
(PMID:37158982)
RGD
PMID:37158982
NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
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Cd86
CD86 molecule
involved_in
ISO
(PMID:25158758)
RGD
PMID:25158758
NCBI chr11:64,142,193...64,200,816
Ensembl chr11:64,163,828...64,200,818
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Colec12
collectin sub-family member 12
involved_in
ISO
(PMID:25204797)
RGD
PMID:25204797
NCBI chr18:732,950...920,620
Ensembl chr18:732,950...920,618
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Havcr2
hepatitis A virus cellular receptor 2
involved_in
ISO
(PMID:22842346)
RGD
PMID:22842346
NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137
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Lgals9
galectin 9
involved_in
IMP
PMID:25158758
UniProt
PMID:25158758
RGD:10054077
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
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Oas1a
2'-5' oligoadenylate synthetase 1A
involved_in
ISO
(PMID:30078389)
RGD
PMID:30078389
NCBI chr12:35,669,798...35,680,505
Ensembl chr12:35,669,801...35,680,517
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Rftn1
raftlin lipid raft linker 1
acts_upstream_of_or_within
ISO
(PMID:21266579)
RGD
PMID:21266579
NCBI chr 9:10,804,611...11,002,084
Ensembl chr 9:10,804,611...11,002,084
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Rnf170
ring finger protein 170
acts_upstream_of_or_within
ISO IEA
(PMID:31076723) GO_REF:0000107
RGD Ensembl
PMID:31076723
GO_REF:0000107
NCBI chr16:72,631,638...72,656,893
Ensembl chr16:65,928,895...65,954,083
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Scara3
scavenger receptor class A, member 3
NOT|involved_in
ISO
(PMID:25204797)
RGD
PMID:25204797
NCBI chr15:40,139,873...40,172,866
Ensembl chr15:40,140,161...40,172,894
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Scimp
SLP adaptor and CSK interacting membrane protein
involved_in
ISO
(PMID:28098138)
RGD
PMID:28098138
NCBI chr10:55,507,646...55,527,764
Ensembl chr10:55,507,519...55,528,171
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Ticam1
TIR domain containing adaptor molecule 1
involved_in
ISO
(PMID:12471095)
RGD
PMID:12471095
NCBI chr 9:1,102,559...1,111,023
Ensembl chr 9:1,102,366...1,123,147
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Tlr3
toll-like receptor 3
involved_in
ISO IEA
(PMID:17128265), (PMID:18172197) GO_REF:0000107
RGD Ensembl
PMID:17128265 PMID:18172197
GO_REF:0000107
NCBI chr16:46,821,980...46,837,900
Ensembl chr16:46,822,039...46,836,545
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Tnf
tumor necrosis factor
involved_in
IMP
PMID:25158758
UniProt
PMID:25158758
RGD:10054077
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Tnip2
TNFAIP3 interacting protein 2
involved_in
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:16633345)
GO_Central Ensembl RGD
PMID:16633345
GO_REF:0000033 GO_REF:0000107
NCBI chr14:76,228,350...76,245,553
Ensembl chr14:76,228,371...76,275,265
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Unc93b1
unc-93 homolog B1, TLR signaling regulator
involved_in
ISO IEA IBA
(PMID:18082565) GO_REF:0000107 (PMID:16415873) GO_REF:0000033
RGD Ensembl GO_Central
PMID:16415873 PMID:18082565
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
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Havcr2
hepatitis A virus cellular receptor 2
involved_in
ISO
(PMID:22842346)
RGD
PMID:22842346
NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137
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Pik3ap1
phosphoinositide-3-kinase adaptor protein 1
involved_in
ISO IEA
(PMID:22187458) GO_REF:0000107
RGD Ensembl
PMID:22187458
GO_REF:0000107
NCBI chr 1:240,090,854...240,245,007
Ensembl chr 1:240,093,065...240,204,828
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Scimp
SLP adaptor and CSK interacting membrane protein
involved_in
ISO
(PMID:28098138)
RGD
PMID:28098138
NCBI chr10:55,507,646...55,527,764
Ensembl chr10:55,507,519...55,528,171
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Tlr7
toll-like receptor 7
involved_in
ISO IEA IBA
(PMID:12032557) GO_REF:0000107 GO_REF:0000033 (PMID:14976261)
RGD Ensembl GO_Central
PMID:12032557 PMID:14976261
GO_REF:0000033 GO_REF:0000107
NCBI chr X:27,027,380...27,054,309
Ensembl chr X:27,027,425...27,054,754
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Unc93b1
unc-93 homolog B1, TLR signaling regulator
involved_in
ISO IEA IBA
(PMID:19006693) GO_REF:0000107 (PMID:16415873) GO_REF:0000033
RGD Ensembl GO_Central
PMID:16415873 PMID:19006693
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
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Myd88
MYD88, innate immune signal transduction adaptor
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:33718825)
UniProt Ensembl RGD
PMID:33718825
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:119,074,437...119,079,415
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Tlr7
toll-like receptor 7
involved_in
ISO IEA
(PMID:12032557) GO_REF:0000107
RGD Ensembl
PMID:12032557
GO_REF:0000107
NCBI chr X:27,027,380...27,054,309
Ensembl chr X:27,027,425...27,054,754
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Tlr8
toll-like receptor 8
involved_in
ISO
(PMID:12032557), (PMID:24942581), (PMID:33718825)
RGD
PMID:12032557 PMID:24942581 PMID:33718825
NCBI chr X:27,091,780...27,116,092
Ensembl chr X:27,091,778...27,116,549
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Epg5
ectopic P-granules 5 autophagy tethering factor
acts_upstream_of_positive_effect
ISO IEA
(PMID:29130391) GO_REF:0000107
RGD Ensembl
PMID:29130391
GO_REF:0000107
NCBI chr18:71,403,990...71,502,079
Ensembl chr18:71,404,010...71,501,502
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Havcr2
hepatitis A virus cellular receptor 2
involved_in
ISO
(PMID:22842346)
RGD
PMID:22842346
NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137
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Nr1h4
nuclear receptor subfamily 1, group H, member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:23372731)
Ensembl RGD
PMID:23372731
GO_REF:0000107
NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
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Pik3ap1
phosphoinositide-3-kinase adaptor protein 1
involved_in
ISO IEA
(PMID:22187458), (PMID:22187460) GO_REF:0000107
RGD Ensembl
PMID:22187458 PMID:22187460
GO_REF:0000107
NCBI chr 1:240,090,854...240,245,007
Ensembl chr 1:240,093,065...240,204,828
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Tlr9
toll-like receptor 9
involved_in
ISO IEA
(PMID:23857366) GO_REF:0000107
RGD Ensembl
PMID:23857366
GO_REF:0000107
NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
G
Tnip2
TNFAIP3 interacting protein 2
involved_in
ISO IEA
(PMID:16633345) GO_REF:0000107
RGD Ensembl
PMID:16633345
GO_REF:0000107
NCBI chr14:76,228,350...76,245,553
Ensembl chr14:76,228,371...76,275,265
G
Unc93b1
unc-93 homolog B1, TLR signaling regulator
involved_in
ISO IEA IBA
(PMID:19006693) GO_REF:0000107 (PMID:16415873), (PMID:38169466) GO_REF:0000033
RGD Ensembl GO_Central
PMID:16415873 PMID:19006693 PMID:38169466
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:201,167,388...201,178,343
Ensembl chr 1:201,152,693...201,178,338
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