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ONTOLOGY REPORT - ANNOTATIONS


Term:annealing activity
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Accession:GO:0140666 term browser browse the term
Definition:An activity that facilitates the formation of a complementary double-stranded polynucleotide molecule.
Synonyms:related_synonym: renaturation
 alt_id: GO:0097617


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ATP-dependent DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad54l RAD54 like enables ISO (PMID:22705370) RGD PMID:22705370 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070
JBrowse link
G Recql RecQ like helicase enables ISO
IBA
(PMID:19177149)
PMID:21873635
RGD PMID:19177149 PMID:21873635 RGD:13792537 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945
JBrowse link
G Recql4 RecQ like helicase 4 enables ISO (PMID:19177149) RGD PMID:19177149 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619
JBrowse link
G Smarca1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 enables ISO (PMID:22705370) RGD PMID:22705370 NCBI chr  X:126,980,201...127,066,385
Ensembl chr  X:126,994,947...127,066,347
JBrowse link
G Smarcal1 Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 enables ISO
ISS
(PMID:18974355), (PMID:22705370)
GO_REF:0000024
RGD
UniProt
PMID:18974355 PMID:22705370 GO_REF:0000024 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146
JBrowse link
G Tp53 tumor protein p53 enables ISO
ISS
(PMID:8183576)
GO_REF:0000024
RGD
UniProt
PMID:8183576 GO_REF:0000024 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 enables ISO (PMID:21078962), (PMID:22704558), (PMID:22705370) RGD PMID:21078962 PMID:22704558 PMID:22705370 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670
JBrowse link
DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IDA RGD PMID:20655937 RGD:7421590 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Blm BLM RecQ like helicase enables ISO
IEA
(PMID:17878217)
GO_REF:0000107
RGD
Ensembl
PMID:17878217 GO_REF:0000107 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IDA RGD PMID:1703006 RGD:10045979 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link
RNA strand annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3, X-linked enables ISO (PMID:27546789) RGD PMID:27546789 NCBI chr  X:9,479,532...9,493,455
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Eif4b eukaryotic translation initiation factor 4B enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:133,206,637...133,228,436 JBrowse link
G Eif4h eukaryotic translation initiation factor 4H enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:22,083,155...22,099,876
Ensembl chr12:22,082,835...22,099,876
JBrowse link
G Fmr1 FMRP translational regulator 1 enables IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:17057366)
Ensembl
UniProt
RGD
PMID:17057366 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Fxr1 FMR1 autosomal homolog 1 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:17057366)
UniProt
Ensembl
RGD
PMID:17057366 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:116,884,167...116,937,586
Ensembl chr 2:116,884,248...116,937,590
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IDA RGD PMID:1703006 RGD:10045979 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609
JBrowse link

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  molecular_function 19979
    binding 17009
      heterocyclic compound binding 5667
        nucleic acid binding 3585
          annealing activity 15
            DNA/DNA annealing activity + 10
            DNA/RNA hybrid annealing activity 0
            RNA strand annealing activity 6
paths to the root