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ONTOLOGY REPORT - ANNOTATIONS

Term:annealing activity
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Accession:GO:0140666 term browser browse the term
Definition:An activity that facilitates the formation of a complementary double-stranded polynucleotide molecule.
Synonyms:related_synonym: renaturation
 alt_id: GO:0097617
 xref: Reactome:R-HSA-5686642 "RAD52 promotes single strand annealing at resected DNA DSBs"


show annotations for term's descendants           Sort by:
ATP-dependent DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad54l RAD54 like enables ISO (PMID:22705370) RGD PMID:22705370 NCBI chr 5:129,575,431...129,605,100
Ensembl chr 5:129,575,378...129,605,070 		JBrowse link
G Smarca1 SNF2 related chromatin remodeling ATPase 1 enables ISO (PMID:22705370) RGD PMID:22705370 NCBI chr  X:126,980,201...127,066,385
Ensembl chr  X:126,994,947...127,066,347 		JBrowse link
G Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 enables ISO
ISS		 (PMID:18974355), (PMID:22705370)
GO_REF:0000024		 RGD
UniProt		 PMID:18974355 PMID:22705370 GO_REF:0000024 NCBI chr 9:74,239,718...74,286,156
Ensembl chr 9:74,240,241...74,286,146 		JBrowse link
G Tp53 tumor protein p53 enables ISO
IEA
ISS		 (PMID:8183576)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:8183576 GO_REF:0000024 GO_REF:0000107 NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524 		JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 enables ISO (PMID:21078962), (PMID:22704558), (PMID:22705370) RGD PMID:21078962 PMID:22704558 PMID:22705370 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670 		JBrowse link
DNA/DNA annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa1 annexin A1 IDA RGD PMID:20655937 RGD:7421590 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343 		JBrowse link
G Blm BLM RecQ like helicase enables ISO (PMID:17878217) RGD PMID:17878217 NCBI chr 1:134,409,832...134,496,073
Ensembl chr 1:134,409,857...134,484,312 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IDA RGD PMID:1703006 RGD:10045979 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609 		JBrowse link
G Recql RecQ like helicase enables ISO
IEA		 (PMID:19177149)
GO_REF:0000107		 RGD
Ensembl		 PMID:19177149 GO_REF:0000107 NCBI chr 4:175,308,337...175,332,965
Ensembl chr 4:175,304,117...175,332,945 		JBrowse link
G Recql4 RecQ like helicase 4 enables ISO (PMID:19177149) RGD PMID:19177149 NCBI chr 7:108,423,453...108,430,790
Ensembl chr 7:108,423,455...108,430,619 		JBrowse link
RNA strand annealing activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3, X-linked enables ISO (PMID:27546789) RGD PMID:27546789 NCBI chr  X:9,479,532...9,493,169
Ensembl chr  X:9,479,532...9,493,168 		JBrowse link
G Fmr1 fragile X messenger ribonucleoprotein 1 enables ISO
ISS		 (PMID:17057366)
GO_REF:0000024		 RGD
UniProt		 PMID:17057366 GO_REF:0000024 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050 		JBrowse link
G Fxr1 FMR1 autosomal homolog 1 enables ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17057366)		 UniProt
Ensembl
RGD		 PMID:17057366 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590 		JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IDA RGD PMID:1703006 RGD:10045979 NCBI chr 7:134,375,318...134,381,610
Ensembl chr 7:134,375,150...134,381,609 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20633
    binding 17721
      organic cyclic compound binding 6136
        nucleic acid binding 3845
          annealing activity 13
            DNA/DNA annealing activity + 10
            DNA/RNA hybrid annealing activity 0
            RNA strand annealing activity 4
paths to the root