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ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum protein-containing complex
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Accession:GO:0140534 term browser browse the term
Definition:A protein complex that is part of an endoplasmic reticulum.


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Derlin-1 retrotranslocation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor part_of ISO (PMID:17872946) UniProt PMID:17872946 NCBI chrNW_004936475:8,692,969...8,727,252 JBrowse link
G Derl1 derlin 1 part_of ISO (PMID:15215856), (PMID:17872946), (PMID:25239945) ParkinsonsUK-UCL PMID:15215856 PMID:17872946 PMID:25239945 NCBI chrNW_004936470:24,262,401...24,286,713 JBrowse link
G Hm13 histocompatibility minor 13 part_of ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004936485:18,539,873...18,583,605 JBrowse link
G LOC101972576 valosin containing protein part_of ISO (PMID:15215856), (PMID:17872946)
(MGI:4441126|PMID:15215856)
UniProt
ParkinsonsUK-UCL
PMID:15215856 PMID:17872946 MGI:4441126 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Rnf139 ring finger protein 139 part_of ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004936470:23,157,312...23,168,565 JBrowse link
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase part_of ISO (PMID:21454652) ParkinsonsUK-UCL PMID:21454652 NCBI chrNW_004936488:9,838,092...9,903,780 JBrowse link
G Selenos selenoprotein S part_of ISO (PMID:15215856) ParkinsonsUK-UCL PMID:15215856 NCBI chrNW_004936483:2,589,773...2,600,837 JBrowse link
G Syvn1 synoviolin 1 part_of ISO (PMID:21454652) ParkinsonsUK-UCL PMID:21454652 NCBI chrNW_004936599:4,235,779...4,243,395 JBrowse link
Derlin-1-VIMP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Derl1 derlin 1 part_of ISO (PMID:15215856) ParkinsonsUK-UCL PMID:15215856 NCBI chrNW_004936470:24,262,401...24,286,713 JBrowse link
G Selenos selenoprotein S part_of ISO (PMID:15215856) ParkinsonsUK-UCL PMID:15215856 NCBI chrNW_004936483:2,589,773...2,600,837 JBrowse link
Dsl1/NZR complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nbas NBAS subunit of NRZ tethering complex part_of ISO (PMID:20462495) UniProt PMID:20462495 NCBI chrNW_004936493:14,940,592...15,241,209 JBrowse link
G Rint1 RAD50 interactor 1 part_of ISO (PMID:20462495) UniProt PMID:20462495 NCBI chrNW_004936479:18,311,698...18,334,946 JBrowse link
G Zw10 zw10 kinetochore protein part_of ISO (PMID:20462495) UniProt PMID:20462495 NCBI chrNW_004936612:825,419...860,971 JBrowse link
EMC complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emc1 ER membrane protein complex subunit 1 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936474:5,512,100...5,539,198 JBrowse link
G Emc10 ER membrane protein complex subunit 10 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936889:288,704...296,144 JBrowse link
G Emc2 ER membrane protein complex subunit 2 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936470:36,354,048...36,397,977 JBrowse link
G Emc3 ER membrane protein complex subunit 3 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936602:3,220,545...3,239,913 JBrowse link
G Emc4 ER membrane protein complex subunit 4 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936673:2,723,563...2,732,164 JBrowse link
G Emc6 ER membrane protein complex subunit 6 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936677:367,364...368,268 JBrowse link
G Emc7 ER membrane protein complex subunit 7 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936673:2,624,900...2,640,973 JBrowse link
G Emc8 ER membrane protein complex subunit 8 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936641:2,696,184...2,710,141 JBrowse link
G Emc9 ER membrane protein complex subunit 9 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936722:403,208...405,497 JBrowse link
G Mmgt1 membrane magnesium transporter 1 part_of ISO (PMID:22119785) UniProt PMID:22119785 NCBI chrNW_004936513:11,229,354...11,239,152 JBrowse link
endoplasmic reticulum chaperone complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 part_of ISO PMID:12475965 ParkinsonsUK-UCL PMID:12475965 RGD:10047147 NCBI chrNW_004936578:3,360,259...3,374,634 JBrowse link
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 part_of ISO (PMID:18400946) UniProt PMID:18400946 NCBI chrNW_004936509:11,334,859...11,383,668 JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chrNW_004936492:10,513,908...10,528,281 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 part_of ISO (PMID:18400946)
(MGI:5613481|PMID:12475965)
UniProt
ParkinsonsUK-UCL
PMID:12475965 PMID:18400946 MGI:5613481 NCBI chrNW_004936487:13,348,465...13,352,717 JBrowse link
G Hyou1 hypoxia up-regulated 1 part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chrNW_004936542:4,005,616...4,018,135 JBrowse link
G Mzb1 marginal zone B and B1 cell specific protein part_of ISO (MGI:4421284|PMID:19805157) UniProt PMID:19805157 MGI:4421284 NCBI chrNW_004936531:8,474,721...8,477,479 JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chrNW_004936594:5,368,199...5,379,215 JBrowse link
G Pdia4 protein disulfide isomerase family A member 4 part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chrNW_004936527:5,189,189...5,210,621 JBrowse link
G Pdia6 protein disulfide isomerase family A member 6 part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chrNW_004936532:6,865,994...6,887,396 JBrowse link
G Ppib peptidylprolyl isomerase B part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chrNW_004936471:24,633,769...24,640,246 JBrowse link
G Sdf2l1 stromal cell derived factor 2 like 1 part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chrNW_004936619:2,049,920...2,051,944 JBrowse link
fatty acid elongase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elovl6 ELOVL fatty acid elongase 6 part_of ISO (PMID:25003994) UniProt PMID:25003994 NCBI chrNW_004936563:1,224,392...1,344,707 JBrowse link
G Hsd17b12 hydroxysteroid 17-beta dehydrogenase 12 part_of ISO (PMID:25003994) UniProt PMID:25003994 NCBI chrNW_004936562:4,802,282...4,949,500 JBrowse link
GET complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camlg calcium modulating ligand part_of ISO (PMID:23041287)
(PMID:32910895)
UniProt PMID:23041287 PMID:32910895 RGD:42721997 NCBI chrNW_004936597:1,979,029...1,988,281 JBrowse link
G Get3 guided entry of tail-anchored proteins factor 3, ATPase part_of ISO (PMID:23041287)
(PMID:32910895)
UniProt PMID:23041287 PMID:32910895 RGD:42721997 NCBI chrNW_004936659:1,851,953...1,858,176 JBrowse link
glucosidase II complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ganab glucosidase II alpha subunit part_of ISO (PMID:10929008)
(MGI:6158858|PMID:27462106)
(MGI:87827|PMID:9148925)
UniProt
MGI
PMID:9148925 PMID:10929008 PMID:27462106 MGI:6158858 MGI:87827 NCBI chrNW_004936581:613,292...633,075 JBrowse link
G Prkcsh protein kinase C substrate 80K-H part_of ISO (PMID:10929008)
(MGI:87827|PMID:9148925)
(MGI:6158858|PMID:27462106)
UniProt
MGI
PMID:9148925 PMID:10929008 PMID:27462106 MGI:6158858 MGI:87827 NCBI chrNW_004936659:1,501,425...1,511,634 JBrowse link
glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpm2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory part_of ISO (PMID:10944123), (PMID:16162815) MGI PMID:10944123 PMID:16162815 NCBI chrNW_004936487:15,565,151...15,567,856 JBrowse link
G LOC101977444 phosphatidylinositol glycan anchor biosynthesis class P part_of ISO (PMID:10944123), (PMID:16162815) MGI PMID:10944123 PMID:16162815 NCBI chrNW_004936500:5,724,178...5,732,081 JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis class A part_of ISO (PMID:16162815) HGNC-UCL PMID:16162815 NCBI chrNW_004936470:4,730,955...4,746,958 JBrowse link
G Pigc phosphatidylinositol glycan anchor biosynthesis class C part_of ISO (PMID:10944123), (PMID:16162815) MGI PMID:10944123 PMID:16162815 NCBI chrNW_004936481:14,962,572...14,964,929 JBrowse link
G Pigh phosphatidylinositol glycan anchor biosynthesis class H part_of ISO (PMID:10944123), (PMID:16162815) MGI PMID:10944123 PMID:16162815 NCBI chrNW_004936495:10,971,448...10,979,622 JBrowse link
G Pigq phosphatidylinositol glycan anchor biosynthesis class Q part_of ISO (PMID:16162815)
(MGI:1339481|PMID:10373468)
UniProt
MGI
PMID:10373468 PMID:16162815 MGI:1339481 NCBI chrNW_004936501:415,232...429,902 JBrowse link
G Pigy phosphatidylinositol glycan anchor biosynthesis class Y part_of ISO (PMID:16162815) MGI PMID:16162815 NCBI chrNW_004936685:984,606...985,106 JBrowse link
G Pyurf PIGY upstream open reading frame part_of ISO (PMID:16162815) HGNC-UCL PMID:16162815 NCBI chrNW_004936685:985,007...987,646 JBrowse link
GPI-anchor transamidase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpaa1 glycosylphosphatidylinositol anchor attachment 1 part_of ISO (PMID:11483512), (PMID:12802054), (PMID:14660601) UniProt PMID:11483512 PMID:12802054 PMID:14660601 NCBI chrNW_004936470:8,092,758...8,096,277 JBrowse link
G Pigk phosphatidylinositol glycan anchor biosynthesis class K part_of ISO (PMID:11483512), (PMID:12802054)
(PMID:10793132)
UniProt PMID:10793132 PMID:11483512 PMID:12802054 NCBI chrNW_004936571:4,002,243...4,132,837 JBrowse link
G Pigs phosphatidylinositol glycan anchor biosynthesis class S part_of ISO (PMID:11483512), (PMID:12802054)
(MGI:3688056|PMID:11483512)
UniProt PMID:11483512 PMID:12802054 MGI:3688056 NCBI chrNW_004936538:4,779,325...4,796,960 JBrowse link
G Pigt phosphatidylinositol glycan anchor biosynthesis class T part_of ISO (PMID:11483512), (PMID:12802054)
(MGI:3688056|PMID:11483512)
UniProt PMID:11483512 PMID:12802054 MGI:3688056 NCBI chrNW_004936514:7,471,134...7,481,183 JBrowse link
G Pigu phosphatidylinositol glycan anchor biosynthesis class U part_of ISO (PMID:12802054) UniProt PMID:12802054 NCBI chrNW_004936561:6,013,145...6,104,548 JBrowse link
Hrd1p ubiquitin ligase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam8a1 family with sequence similarity 8 member A1 part_of ISO (PMID:28827405) FlyBase PMID:28827405 NCBI chrNW_004936552:3,519,650...3,527,028 JBrowse link
Hrd1p ubiquitin ligase ERAD-L complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase part_of ISO (PMID:26471130) UniProt PMID:26471130 NCBI chrNW_004936488:9,838,092...9,903,780 JBrowse link
G Syvn1 synoviolin 1 part_of ISO (PMID:28827405)
(PMID:26471130)
UniProt PMID:26471130 PMID:28827405 NCBI chrNW_004936599:4,235,779...4,243,395 JBrowse link
IRE1-TRAF2-ASK1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ern1 endoplasmic reticulum to nucleus signaling 1 part_of ISO (PMID:23000344) ParkinsonsUK-UCL PMID:23000344 NCBI chrNW_004936541:4,613,197...4,705,911 JBrowse link
G Ern2 endoplasmic reticulum to nucleus signaling 2 part_of ISO (MGI:5616327|PMID:12050113) ParkinsonsUK-UCL PMID:12050113 MGI:5616327 NCBI chrNW_004936501:8,332,507...8,350,176 JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 part_of ISO (PMID:12050113), (PMID:23000344) ParkinsonsUK-UCL PMID:12050113 PMID:23000344 NCBI chrNW_004936560:3,988,696...4,197,953 JBrowse link
G Traf2 TNF receptor associated factor 2 part_of ISO (PMID:23000344)
(MGI:5616327|PMID:12050113)
ParkinsonsUK-UCL PMID:12050113 PMID:23000344 MGI:5616327 NCBI chrNW_004936669:1,004,891...1,034,913 JBrowse link
MHC class I peptide loading complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2-microglobulin part_of ISO (PMID:21263072) UniProt PMID:21263072 NCBI chrNW_004936471:7,646,504...7,655,656 JBrowse link
G Calr calreticulin part_of ISO (PMID:21263072)
(MGI:3813437|PMID:11825569)
UniProt
BHF-UCL
PMID:11825569 PMID:21263072 MGI:3813437 NCBI chrNW_004936659:1,994,695...1,999,070 JBrowse link
G LOC101978548 TAP binding protein part_of ISO (PMID:17947644), (PMID:21263072) RGD
UniProt
PMID:11294569 PMID:17947644 PMID:21263072 RGD:13792542 RGD:634074 NCBI chrNW_004936476:25,554,186...25,566,634 JBrowse link
G Pdia3 protein disulfide isomerase family A member 3 part_of ISO PMID:17947644
(PMID:17947644), (PMID:21263072)
UniProt PMID:17947644 PMID:21263072 RGD:13792542 NCBI chrNW_004936471:6,809,181...6,834,189 JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member part_of ISO PMID:17947644
(PMID:17947644)
UniProt PMID:17947644 RGD:13792542 NCBI chrNW_004936476:25,899,514...25,907,690 JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member part_of ISO (PMID:17947644) RGD
UniProt
PMID:10508608 PMID:17947644 RGD:13792542 RGD:1601415 NCBI chrNW_004936476:25,913,699...25,923,419 JBrowse link
oligosaccharyltransferase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dad1 defender against cell death 1 is_active_in
part_of
ISO (PMID:22467853)
(PMID:12887896)
ARUK-UCL
UniProt
PMID:12887896 PMID:22467853 NCBI chrNW_004936722:1,678,952...1,698,583 JBrowse link
G Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit part_of
is_active_in
ISO (PMID:9642163)
(PMID:12887896)
(PMID:22467853)
UniProt
ARUK-UCL
PMID:9642163 PMID:12887896 PMID:22467853 NCBI chrNW_004936474:6,589,939...6,597,951 JBrowse link
G Krtcap2 keratinocyte associated protein 2 is_active_in ISO (PMID:22467853)
(MGI:3689790|PMID:15835887)
ARUK-UCL
HGNC-UCL
PMID:15835887 PMID:22467853 MGI:3689790 NCBI chrNW_004936580:4,675,612...4,678,264 JBrowse link
G Magt1 magnesium transporter 1 part_of ISO (PMID:15835887), (PMID:25135935) HGNC-UCL PMID:15835887 PMID:25135935 NCBI chrNW_004936683:2,737,545...2,775,679 JBrowse link
G Ost4 oligosaccharyltransferase complex subunit 4, non-catalytic part_of ISO (PMID:23606741) UniProt PMID:23606741 NCBI chrNW_004936493:5,469,511...5,470,773 JBrowse link
G Ostc oligosaccharyltransferase complex non-catalytic subunit part_of ISO (PMID:15835887) HGNC PMID:15835887 NCBI chrNW_004936818:39,085...52,309 JBrowse link
G Rpn1 ribophorin I part_of ISO (PMID:12887896)
(PMID:9642163)
UniProt PMID:9642163 PMID:12887896 NCBI chrNW_004936798:347,803...355,392 JBrowse link
G Rpn2 ribophorin II part_of ISO (PMID:9642163)
(PMID:12887896)
UniProt PMID:9642163 PMID:12887896 NCBI chrNW_004936561:3,960,979...4,020,792 JBrowse link
G Stt3a STT3 oligosaccharyltransferase complex catalytic subunit A is_active_in ISO (PMID:22467853) ARUK-UCL PMID:22467853 NCBI chrNW_004936743:1,975,847...2,000,100 JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B is_active_in ISO (PMID:22467853) ARUK-UCL PMID:22467853 NCBI chrNW_004936473:22,197,625...22,288,941 JBrowse link
G Trex1 three prime repair exonuclease 1 part_of ISO (MGI:5787754|PMID:26320659) MGI PMID:26320659 MGI:5787754 NCBI chrNW_004936529:264,535...266,451 JBrowse link
G Tusc3 tumor suppressor candidate 3 part_of ISO (PMID:15835887) HGNC-UCL PMID:15835887 NCBI chrNW_004936573:4,823,939...4,977,997 JBrowse link
oligosaccharyltransferase I complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B part_of ISO (PMID:12887896) UniProt PMID:12887896 NCBI chrNW_004936473:22,197,625...22,288,941 JBrowse link
G Tmem258 transmembrane protein 258 part_of ISO (PMID:26472760) UniProt PMID:26472760 NCBI chrNW_004936581:1,332,981...1,335,819 JBrowse link
oligosaccharyltransferase II complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B part_of ISO (PMID:12887896) UniProt PMID:12887896 NCBI chrNW_004936473:22,197,625...22,288,941 JBrowse link
oligosaccharyltransferase III complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Stt3a STT3 oligosaccharyltransferase complex catalytic subunit A part_of ISO (PMID:12887896) UniProt PMID:12887896 NCBI chrNW_004936743:1,975,847...2,000,100 JBrowse link
procollagen-proline 4-dioxygenase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P4ha1 prolyl 4-hydroxylase subunit alpha 1 part_of ISO (MGI:72931|PMID:7753822) MGI PMID:7753822 MGI:72931 NCBI chrNW_004936521:5,981,205...6,045,195 JBrowse link
G P4ha2 prolyl 4-hydroxylase subunit alpha 2 part_of ISO (MGI:72931|PMID:7753822) MGI PMID:7753822 MGI:72931 NCBI chrNW_004936647:2,930,748...2,963,168 JBrowse link
G P4hb prolyl 4-hydroxylase subunit beta part_of ISO (PMID:7753822) MGI PMID:7753822 NCBI chrNW_004936594:5,368,199...5,379,215 JBrowse link
Sec61 translocon complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6ip1 ADP ribosylation factor like GTPase 6 interacting protein 1 part_of ISO (MGI:1858942|PMID:10508919) MGI PMID:10508919 MGI:1858942 NCBI chrNW_004936501:4,648,699...4,670,786 JBrowse link
G Ssr4 signal sequence receptor subunit 4 ISO RGD PMID:7916687 RGD:61758 NCBI chrNW_004936809:675,178...679,245 JBrowse link
serine C-palmitoyltransferase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101967158 serine palmitoyltransferase 2 part_of ISO (PMID:19416851) UniProt PMID:19416851 NCBI chrNW_004936488:6,313,189...6,404,425 JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 part_of ISO (PMID:19416851) UniProt PMID:19416851 NCBI chrNW_004936796:886,946...948,254 JBrowse link
G Sptlc3 serine palmitoyltransferase long chain base subunit 3 part_of ISO (PMID:17331073), (PMID:19416851) UniProt PMID:17331073 PMID:19416851 NCBI chrNW_004936485:6,647,930...6,784,792 JBrowse link
G Sptssa serine palmitoyltransferase small subunit A part_of ISO (PMID:19416851) UniProt PMID:19416851 NCBI chrNW_004936494:8,717,821...8,738,923 JBrowse link
G Sptssb serine palmitoyltransferase small subunit B part_of ISO (PMID:19416851)
(MGI:5689923|PMID:26438849)
UniProt
MGI
PMID:19416851 PMID:26438849 MGI:5689923 NCBI chrNW_004936708:1,270,720...1,301,493 JBrowse link
signal peptidase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sec11a SEC11 homolog A, signal peptidase complex subunit part_of ISO (PMID:3511473), (PMID:8444896), (PMID:8632014) UniProt PMID:3511473 PMID:8444896 PMID:8632014 NCBI chrNW_004936483:16,724,674...16,764,586 JBrowse link
G Sec11c SEC11 homolog C, signal peptidase complex subunit part_of ISO (PMID:3511473), (PMID:8444896), (PMID:8632014) UniProt PMID:3511473 PMID:8444896 PMID:8632014 NCBI chrNW_004936497:5,527,479...5,530,051 JBrowse link
G Spcs1 signal peptidase complex subunit 1 part_of ISO (PMID:3511473), (PMID:8444896), (PMID:8632014) UniProt PMID:3511473 PMID:8444896 PMID:8632014 NCBI chrNW_004936473:3,495,964...3,497,573 JBrowse link
G Spcs2 signal peptidase complex subunit 2 part_of ISO (PMID:3511473), (PMID:8444896), (PMID:8632014) UniProt PMID:3511473 PMID:8444896 PMID:8632014 NCBI chrNW_004936498:3,848,045...3,872,691 JBrowse link
G Spcs3 signal peptidase complex subunit 3 part_of ISO (PMID:3511473), (PMID:8444896), (PMID:8632014) UniProt PMID:3511473 PMID:8444896 PMID:8632014 NCBI chrNW_004936516:6,903,337...6,915,232 JBrowse link
signal recognition particle receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rp9 RP9 pre-mRNA splicing factor part_of ISO (MGI:3688359|PMID:15652350) UniProt PMID:15652350 MGI:3688359 NCBI chrNW_004936478:8,687,584...8,722,345 JBrowse link
SPOTS complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 part_of ISO (PMID:20182505), (PMID:25691431) MGI PMID:20182505 PMID:25691431 NCBI chrNW_004936490:15,069,435...15,076,112 JBrowse link
G Sptlc1 serine palmitoyltransferase long chain base subunit 1 part_of ISO (PMID:20182505), (PMID:25691431) UniProt PMID:20182505 PMID:25691431 NCBI chrNW_004936796:886,946...948,254 JBrowse link
SREBP-SCAP-Insig complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insig1 insulin induced gene 1 part_of ISO (PMID:12202038), (PMID:15899885) UniProt PMID:12202038 PMID:15899885 NCBI chrNW_004936527:9,684,304...9,696,951 JBrowse link
G Insig2 insulin induced gene 2 part_of ISO (PMID:12242332) UniProt PMID:12242332 NCBI chrNW_004936469:52,120,063...52,140,646 JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 part_of ISO (PMID:12202038), (PMID:12242332) UniProt PMID:12202038 PMID:12242332 NCBI chrNW_004936492:115,923...174,614 JBrowse link
TAP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdia3 protein disulfide isomerase family A member 3 ISO RGD PMID:9637924 RGD:9999147 NCBI chrNW_004936471:6,809,181...6,834,189 JBrowse link
G Tap1 transporter 1, ATP binding cassette subfamily B member part_of ISO PMID:17947644
(PMID:11133832), (PMID:15518576), (PMID:17947644)
RGD
UniProt
PMID:11133832 PMID:11595746 PMID:14622282 PMID:15518576 PMID:17947644 RGD:1300480 RGD:13792542 RGD:2312377 NCBI chrNW_004936476:25,899,514...25,907,690 JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member part_of ISO PMID:17947644
(PMID:15518576), (PMID:17947644)
RGD
UniProt
PMID:11595746 PMID:15518576 PMID:17947644 RGD:13792542 RGD:2312377 NCBI chrNW_004936476:25,913,699...25,923,419 JBrowse link
UDP-N-acetylglucosamine transferase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext2 exostosin glycosyltransferase 2 part_of ISO (PMID:12907669) BHF-UCL PMID:12907669 NCBI chrNW_004936562:4,345,146...4,489,180 JBrowse link
VCP-NPL4-UFD1 AAA ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faf1 Fas associated factor 1 part_of ISO (PMID:18775313) BHF-UCL PMID:18775313 NCBI chrNW_004936522:9,774,943...10,160,987 JBrowse link
G Faf2 Fas associated factor family member 2 part_of ISO (PMID:18775313) BHF-UCL PMID:18775313 NCBI chrNW_004936597:710,168...772,455 JBrowse link
G LOC101972576 valosin containing protein part_of ISO PMID:10811609
(MGI:5634894|PMID:10811609), (MGI:5640950|PMID:17000876)
(MGI:5634892|PMID:12847084)
ParkinsonsUK-UCL PMID:10811609 PMID:12847084 PMID:17000876 MGI:5634892 MGI:5634894 MGI:5640950 RGD:633500 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor part_of ISO (PMID:26471729)
PMID:18775313
PMID:10811609
PMID:17000876
UniProt
BHF-UCL
ParkinsonsUK-UCL
PMID:10811609 PMID:17000876 PMID:18775313 PMID:26471729 RGD:10047192 RGD:633500 RGD:8554384 NCBI chrNW_004936594:5,206,222...5,251,042 JBrowse link
G Rnf125 ring finger protein 125 part_of ISO (PMID:26471729) UniProt PMID:26471729 NCBI chrNW_004936682:1,228,903...1,268,651 JBrowse link
G Ubxn1 UBX domain protein 1 part_of ISO (PMID:18775313) BHF-UCL PMID:18775313 NCBI chrNW_004936581:584,519...587,863 JBrowse link
G Ubxn7 UBX domain protein 7 part_of ISO (PMID:18775313) BHF-UCL PMID:18775313 NCBI chrNW_004936784:987,411...1,038,483 JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 part_of ISO PMID:12847084
(MGI:5634894|PMID:10811609), (MGI:5640950|PMID:17000876)
(PMID:26471729)
ParkinsonsUK-UCL
UniProt
PMID:10811609 PMID:12847084 PMID:17000876 PMID:26471729 MGI:5634894 MGI:5640950 RGD:10047330 RGD:633500 NCBI chrNW_004936619:3,395,130...3,419,704 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 12317
    protein-containing complex 3926
      endoplasmic reticulum protein-containing complex 102
        Derlin-1 retrotranslocation complex 8
        Derlin-1-VIMP complex 2
        Dsl1/NZR complex 3
        EMC complex 10
        ER ubiquitin ligase complex + 3
        ERMES complex 0
        GET complex 2
        GPI-anchor transamidase complex 5
        IRE1-TRAF2-ASK1 complex 4
        Ig heavy chain-bound endoplasmic reticulum chaperone complex 0
        Ire1 complex 0
        MHC class I peptide loading complex + 6
        SREBP-SCAP-Insig complex 3
        Sec62/Sec63 complex 0
        TAP complex 3
        Tapasin-ERp57 complex 0
        UDP-N-acetylglucosamine transferase complex 1
        VCP-NPL4-UFD1 AAA ATPase complex 8
        dolichyl-phosphate-mannose-protein mannosyltransferase complex + 0
        egasyn-beta-glucuronidase complex 0
        endoplasmic reticulum Sec complex + 0
        endoplasmic reticulum chaperone complex 11
        endoplasmic reticulum palmitoyltransferase complex + 6
        fatty acid elongase complex 2
        glucosidase II complex 2
        glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex 8
        glycosylphosphatidylinositol-mannosyltransferase I complex 0
        glycosylphosphatidylinositol-mannosyltransferase II complex 0
        luminal surveillance complex 0
        mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
        oligosaccharyltransferase complex + 13
        phospholamban complex 0
        procollagen-proline 4-dioxygenase complex + 3
        ryanodine receptor complex 0
        signal peptidase complex 5
        signal recognition particle receptor complex 1
        translocon complex + 2
Path 2
Term Annotations click to browse term
  cellular_component 12317
    cellular anatomical entity 12174
      organelle 9581
        membrane-bounded organelle 8794
          intracellular membrane-bounded organelle 8390
            endoplasmic reticulum 1233
              endoplasmic reticulum protein-containing complex 102
                Derlin-1 retrotranslocation complex 8
                Derlin-1-VIMP complex 2
                Dsl1/NZR complex 3
                EMC complex 10
                ER ubiquitin ligase complex + 3
                ERMES complex 0
                GET complex 2
                GPI-anchor transamidase complex 5
                IRE1-TRAF2-ASK1 complex 4
                Ig heavy chain-bound endoplasmic reticulum chaperone complex 0
                Ire1 complex 0
                MHC class I peptide loading complex + 6
                SREBP-SCAP-Insig complex 3
                Sec62/Sec63 complex 0
                TAP complex 3
                Tapasin-ERp57 complex 0
                UDP-N-acetylglucosamine transferase complex 1
                VCP-NPL4-UFD1 AAA ATPase complex 8
                dolichyl-phosphate-mannose-protein mannosyltransferase complex + 0
                egasyn-beta-glucuronidase complex 0
                endoplasmic reticulum Sec complex + 0
                endoplasmic reticulum chaperone complex 11
                endoplasmic reticulum palmitoyltransferase complex + 6
                fatty acid elongase complex 2
                glucosidase II complex 2
                glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex 8
                glycosylphosphatidylinositol-mannosyltransferase I complex 0
                glycosylphosphatidylinositol-mannosyltransferase II complex 0
                luminal surveillance complex 0
                mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
                oligosaccharyltransferase complex + 13
                phospholamban complex 0
                procollagen-proline 4-dioxygenase complex + 3
                ryanodine receptor complex 0
                signal peptidase complex 5
                signal recognition particle receptor complex 1
                translocon complex + 2
paths to the root