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ONTOLOGY REPORT - ANNOTATIONS


Term:endoplasmic reticulum protein-containing complex
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Accession:GO:0140534 term browser browse the term
Definition:A protein complex that is part of an endoplasmic reticulum.


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Derlin-1 retrotranslocation complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMFR autocrine motility factor receptor part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:29,366,812...29,417,800
Ensembl chr 6:29,366,624...29,413,703
JBrowse link
G DERL1 derlin 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:16,310,407...16,341,405
Ensembl chr 4:16,310,364...16,346,745
JBrowse link
G HM13 histocompatibility minor 13 part_of IEA Ensembl GO_REF:0000107 NCBI chr17:35,248,575...35,288,431
Ensembl chr17:35,248,569...35,288,424
JBrowse link
G RNF139 ring finger protein 139 part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:15,157,571...15,182,520
Ensembl chr 4:15,154,331...15,263,306
JBrowse link
G SEL1L SEL1L adaptor subunit of ERAD E3 ubiquitin ligase part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:104,219,628...104,283,250
Ensembl chr 7:104,218,301...104,283,244
JBrowse link
G SELENOS selenoprotein S part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:139,829,002...139,836,923
Ensembl chr 1:139,828,791...139,836,914
JBrowse link
G SYVN1 synoviolin 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:7,059,444...7,066,617
Ensembl chr 2:7,059,462...7,072,809
JBrowse link
G VCP valosin containing protein part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,796,446...235,876,321
JBrowse link
Derlin-1-VIMP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERL1 derlin 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 4:16,310,407...16,341,405
Ensembl chr 4:16,310,364...16,346,745
JBrowse link
G SELENOS selenoprotein S part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:139,829,002...139,836,923
Ensembl chr 1:139,828,791...139,836,914
JBrowse link
Dsl1/NZR complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NBAS NBAS subunit of NRZ tethering complex part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:121,882,734...122,242,325
Ensembl chr 3:121,882,743...122,242,327
JBrowse link
G RINT1 RAD50 interactor 1 part_of IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 9:105,392,853...105,430,198
Ensembl chr 9:105,392,864...105,430,160
JBrowse link
G ZW10 zw10 kinetochore protein part_of IEA Ensembl GO_REF:0000107 NCBI chr 9:41,358,801...41,400,254
Ensembl chr 9:41,345,682...41,400,304
JBrowse link
EMC complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EMC1 ER membrane protein complex subunit 1 part_of IEA
IBA
(PMID:21873635) InterPro
Ensembl
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:77,723,374...77,747,780
Ensembl chr 6:77,718,840...77,747,771
JBrowse link
G EMC10 ER membrane protein complex subunit 10 part_of IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 6:55,316,384...55,322,251
Ensembl chr 6:55,316,471...55,322,250
JBrowse link
G EMC2 ER membrane protein complex subunit 2 part_of IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 4:28,981,118...29,079,270
Ensembl chr 4:28,812,292...29,079,270
JBrowse link
G EMC3 ER membrane protein complex subunit 3 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:66,221,844...66,241,963
Ensembl chr13:66,217,970...66,241,935
JBrowse link
G EMC4 ER membrane protein complex subunit 4 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:80,266,001...80,270,691
Ensembl chr 7:80,265,446...80,270,691
JBrowse link
G EMC6 ER membrane protein complex subunit 6 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:49,759,153...49,760,069 JBrowse link
G EMC7 ER membrane protein complex subunit 7 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:80,391,198...80,408,340
Ensembl chr 7:80,391,189...80,448,354
JBrowse link
G EMC8 ER membrane protein complex subunit 8 part_of IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 6:3,137,630...3,152,291 JBrowse link
G EMC9 ER membrane protein complex subunit 9 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:75,159,150...75,161,917
Ensembl chr 7:75,159,303...75,169,021
JBrowse link
G MMGT1 membrane magnesium transporter 1 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:111,145,712...111,158,298
Ensembl chr  X:111,144,233...111,158,335
JBrowse link
endoplasmic reticulum chaperone complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJB11 DnaJ heat shock protein family (Hsp40) member B11 part_of ISO PMID:12475965 ParkinsonsUK-UCL PMID:12475965 RGD:10047147 NCBI chr13:124,387,921...124,409,967 JBrowse link
G DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 part_of IEA Ensembl GO_REF:0000107 NCBI chr15:88,198,751...88,256,396
Ensembl chr15:88,198,794...88,259,002
JBrowse link
G HSP90B1 heat shock protein 90 beta family member 1 part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chr 5:80,511,513...80,531,016
Ensembl chr 5:80,511,507...80,531,005
JBrowse link
G HSPA5 heat shock protein family A (Hsp70) member 5 part_of IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 1:265,930,044...265,934,959
Ensembl chr 1:265,930,045...265,934,904
JBrowse link
G HYOU1 hypoxia up-regulated 1 part_of IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 9:46,264,929...46,277,056
Ensembl chr 9:46,264,929...46,276,996
JBrowse link
G MZB1 marginal zone B and B1 cell specific protein part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:141,277,541...141,279,652
Ensembl chr 2:141,277,544...141,279,641
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta part_of IEA Ensembl GO_REF:0000107 NCBI chr12:1,121,816...1,131,291
Ensembl chr12:1,121,793...1,131,291
JBrowse link
G PDIA4 protein disulfide isomerase family A member 4 part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chr 9:109,260,850...109,280,256
Ensembl chr 9:109,252,010...109,280,249
JBrowse link
G PDIA6 protein disulfide isomerase family A member 6 part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chr 3:125,752,079...125,774,225
Ensembl chr 3:125,751,970...125,776,955
JBrowse link
G PPIB peptidylprolyl isomerase B part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:107,886,663...107,893,155
Ensembl chr 1:107,886,658...107,897,098
JBrowse link
G SDF2L1 stromal cell derived factor 2 like 1 part_of ISO (MGI:5613481|PMID:12475965) ParkinsonsUK-UCL PMID:12475965 MGI:5613481 NCBI chr14:50,249,607...50,251,636 JBrowse link
fatty acid elongase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELOVL6 ELOVL fatty acid elongase 6 part_of IEA Ensembl GO_REF:0000107 NCBI chr 8:112,038,670...112,190,079
Ensembl chr 8:111,750,960...112,191,274
JBrowse link
G HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:18,461,487...18,611,761
Ensembl chr 2:18,456,019...18,611,782
JBrowse link
GET complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAMLG calcium modulating ligand part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:136,957,626...136,967,944
Ensembl chr 2:136,957,624...136,968,381
JBrowse link
G GET1 guided entry of tail-anchored proteins factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr13:202,962,652...202,978,390
Ensembl chr13:202,962,664...202,988,859
JBrowse link
G GET3 guided entry of tail-anchored proteins factor 3, ATPase part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:66,251,381...66,261,135
Ensembl chr 2:66,249,566...66,260,954
JBrowse link
glucosidase II complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GANAB glucosidase II alpha subunit part_of ISS
IEA
IBA
(PMID:21873635) UniProt
Ensembl
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:9,100,672...9,118,396
Ensembl chr 2:9,100,702...9,118,399
JBrowse link
G PRKCSH protein kinase C substrate 80K-H part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:70,097,424...70,114,460
Ensembl chr 2:70,097,444...70,114,446
JBrowse link
glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:268,420,273...268,423,557
Ensembl chr 1:268,418,444...268,423,552
JBrowse link
G LOC110256448 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like part_of ISO (PMID:16162815) MGI PMID:16162815 NCBI chr13:162,392,377...162,394,317 JBrowse link
G PIGA phosphatidylinositol glycan anchor biosynthesis class A part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:11,871,746...11,886,519
Ensembl chr  X:11,871,746...11,886,440
JBrowse link
G PIGC phosphatidylinositol glycan anchor biosynthesis class C part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:114,824,795...114,827,731
Ensembl chr 9:114,824,800...114,827,404
JBrowse link
G PIGH phosphatidylinositol glycan anchor biosynthesis class H part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:91,306,119...91,316,348
Ensembl chr 7:91,306,119...91,316,278
JBrowse link
G PIGP phosphatidylinositol glycan anchor biosynthesis class P part_of ISO (PMID:10944123), (PMID:16162815) MGI PMID:10944123 PMID:16162815 NCBI chr13:200,686,716...200,695,537 JBrowse link
G PIGQ phosphatidylinositol glycan anchor biosynthesis class Q part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:41,164,399...41,177,453
Ensembl chr 3:41,160,656...41,176,508
JBrowse link
G PYURF PIGY upstream open reading frame part_of ISO (PMID:16162815) HGNC-UCL PMID:16162815 NCBI chr 8:130,527,571...130,529,983 JBrowse link
GPI-anchor transamidase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPAA1 glycosylphosphatidylinositol anchor attachment 1 part_of IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 4:614,596...618,274
Ensembl chr 4:614,601...618,241
JBrowse link
G PIGK phosphatidylinositol glycan anchor biosynthesis class K part_of IBA
ISS
IEA
(PMID:21873635) GO_Central
UniProt
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000024 NCBI chr 6:136,057,996...136,175,236
Ensembl chr 6:136,057,985...136,180,637
JBrowse link
G PIGS phosphatidylinositol glycan anchor biosynthesis class S part_of IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr12:44,808,326...44,821,428
Ensembl chr12:44,808,331...44,827,247
JBrowse link
G PIGT phosphatidylinositol glycan anchor biosynthesis class T part_of IBA
IEA
(PMID:21873635) GO_Central
Ensembl
InterPro
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr17:47,735,339...47,750,052
Ensembl chr17:47,734,803...47,751,909
JBrowse link
G PIGU phosphatidylinositol glycan anchor biosynthesis class U part_of IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr17:37,959,703...38,081,110
Ensembl chr17:37,942,707...38,082,181
JBrowse link
Hrd1p ubiquitin ligase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAM8A1 family with sequence similarity 8 member A1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 7:13,378,129...13,390,895
Ensembl chr 7:13,378,139...13,390,892
JBrowse link
G SYVN1 synoviolin 1 part_of IEA InterPro GO_REF:0000002 NCBI chr 2:7,059,444...7,066,617
Ensembl chr 2:7,059,462...7,072,809
JBrowse link
Hrd1p ubiquitin ligase ERAD-L complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AUP1 AUP1 lipid droplet regulating VLDL assembly factor part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:68,520,048...68,523,076
Ensembl chr 3:68,519,969...68,523,076
JBrowse link
G DERL1 derlin 1 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:16,310,407...16,341,405
Ensembl chr 4:16,310,364...16,346,745
JBrowse link
G DERL2 derlin 2 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:51,508,138...51,524,799
Ensembl chr12:51,507,996...51,524,793
JBrowse link
G DERL3 derlin 3 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:49,871,077...49,875,022
Ensembl chr14:49,871,218...49,877,683
JBrowse link
G RHBDD2 rhomboid domain containing 2 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:10,299,201...10,329,638
Ensembl chr 3:10,299,208...10,309,622
JBrowse link
G SEL1L SEL1L adaptor subunit of ERAD E3 ubiquitin ligase part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:104,219,628...104,283,250
Ensembl chr 7:104,218,301...104,283,244
JBrowse link
G SEL1L2 SEL1L2 adaptor subunit of ERAD E3 ligase part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:22,515,436...22,615,444
Ensembl chr17:22,512,896...22,627,400
JBrowse link
G SYVN1 synoviolin 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:7,059,444...7,066,617
Ensembl chr 2:7,059,462...7,072,809
JBrowse link
IRE1-TRAF2-ASK1 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ERN1 endoplasmic reticulum to nucleus signaling 1 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:14,881,913...14,963,290
Ensembl chr12:14,881,923...14,997,426
JBrowse link
G ERN2 endoplasmic reticulum to nucleus signaling 2 part_of IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 3:22,510,067...22,537,872
Ensembl chr 3:22,509,773...22,537,868
JBrowse link
G ICAM2 intercellular adhesion molecule 2 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:14,986,636...14,991,639
Ensembl chr12:14,881,923...14,997,426
JBrowse link
G MAP3K5 mitogen-activated protein kinase kinase kinase 5 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:27,380,143...27,600,500
Ensembl chr 1:27,380,142...27,600,495
JBrowse link
G TRAF2 TNF receptor associated factor 2 part_of IEA Ensembl GO_REF:0000107
MHC class I peptide loading complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB9 ATP binding cassette subfamily B member 9 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:29,895,752...29,935,571
Ensembl chr14:29,895,770...29,935,563
JBrowse link
G B2M beta-2-microglobulin part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:126,865,767...126,878,501
Ensembl chr 1:126,835,143...126,981,582
JBrowse link
G B2M beta-2-microglobulin part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:126,837,721...126,844,043
Ensembl chr 1:126,835,143...126,981,582
JBrowse link
G CALR calreticulin part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:66,098,263...66,102,074
Ensembl chr 2:66,098,225...66,102,340
JBrowse link
G PDIA3 protein disulfide isomerase family A member 3 part_of IEA Ensembl GO_REF:0000107 NCBI chr 1:127,786,174...127,814,096
Ensembl chr 1:127,785,772...127,814,196
JBrowse link
G TAP1 transporter 1, ATP binding cassette subfamily B member part_of ISO (PMID:17947644) UniProt PMID:17947644 RGD:13792542 NCBI chr 7:25,062,772...25,071,989
Ensembl chr 7:25,062,773...25,071,862
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member part_of ISO (PMID:17947644) RGD
UniProt
PMID:10508608 PMID:17947644 RGD:13792542 RGD:1601415 NCBI chr 7:25,045,085...25,056,915 JBrowse link
G TAPBP TAP binding protein part_of ISO PMID:17947644
(PMID:17947644), (PMID:21263072)
RGD
UniProt
PMID:11294569 PMID:17947644 PMID:21263072 RGD:13792542 RGD:634074 NCBI chr 7:29,663,491...29,673,453
Ensembl chr 7:29,663,446...29,676,335
JBrowse link
oligosaccharyltransferase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DAD1 defender against cell death 1 part_of
is_active_in
IBA
ISO
ISS
IEA
(PMID:21873635)
(PMID:22467853)
GO_Central
ARUK-UCL
UniProt
InterPro
PMID:21873635 PMID:22467853 GO_REF:0000002 GO_REF:0000024 NCBI chr 7:76,432,040...76,457,403
Ensembl chr 7:76,432,029...76,457,192
JBrowse link
G DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit part_of
is_active_in
ISS
ISO
IBA
(PMID:22467853)
(PMID:21873635)
UniProt
ARUK-UCL
GO_Central
PMID:21873635 PMID:22467853 GO_REF:0000024 NCBI chr 6:78,885,268...78,895,720
Ensembl chr 6:78,885,268...78,895,853
JBrowse link
G KRTCAP2 keratinocyte associated protein 2 is_active_in ISO (PMID:22467853)
(MGI:3689790|PMID:15835887)
ARUK-UCL
HGNC-UCL
PMID:15835887 PMID:22467853 MGI:3689790 NCBI chr 4:94,643,300...94,646,436
Ensembl chr 4:94,642,646...94,646,440
JBrowse link
G MAGT1 magnesium transporter 1 part_of IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr  X:61,894,237...61,958,511
Ensembl chr  X:61,894,237...61,958,517
JBrowse link
G OST4 oligosaccharyltransferase complex subunit 4, non-catalytic part_of ISO (PMID:23606741) UniProt PMID:23606741 NCBI chr 3:112,046,116...112,055,376 JBrowse link
G OSTC oligosaccharyltransferase complex non-catalytic subunit part_of IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 8:113,435,983...113,447,196
Ensembl chr 8:113,435,986...113,447,192
JBrowse link
G RPN1 ribophorin I part_of IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr13:71,892,600...71,908,772
Ensembl chr13:71,884,282...71,941,263
JBrowse link
G RPN2 ribophorin II part_of IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr17:40,322,364...40,378,866
Ensembl chr17:40,322,394...40,378,857
JBrowse link
G STT3A STT3 oligosaccharyltransferase complex catalytic subunit A part_of
is_active_in
IEA
ISO
(PMID:22467853) Ensembl
ARUK-UCL
PMID:22467853 GO_REF:0000107 NCBI chr 9:52,726,794...52,754,671
Ensembl chr 9:52,704,601...52,790,663
JBrowse link
G STT3B STT3 oligosaccharyltransferase complex catalytic subunit B is_active_in ISO (PMID:22467853) ARUK-UCL PMID:22467853 NCBI chr13:17,532,341...17,635,039
Ensembl chr13:17,534,171...17,635,035
JBrowse link
G TREX1 three prime repair exonuclease 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr13:31,177,604...31,180,764
Ensembl chr13:31,178,601...31,180,592
JBrowse link
G TUSC3 tumor suppressor candidate 3 part_of IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr17:3,312,684...3,507,372
Ensembl chr17:3,312,684...3,507,729
JBrowse link
oligosaccharyltransferase I complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STT3B STT3 oligosaccharyltransferase complex catalytic subunit B part_of ISS UniProt GO_REF:0000024 NCBI chr13:17,532,341...17,635,039
Ensembl chr13:17,534,171...17,635,035
JBrowse link
G TMEM258 transmembrane protein 258 part_of IEA UniProt GO_REF:0000104 NCBI chr 2:9,756,970...9,760,615 JBrowse link
oligosaccharyltransferase II complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STT3B STT3 oligosaccharyltransferase complex catalytic subunit B part_of ISO (PMID:12887896) UniProt PMID:12887896 NCBI chr13:17,532,341...17,635,039
Ensembl chr13:17,534,171...17,635,035
JBrowse link
oligosaccharyltransferase III complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G STT3A STT3 oligosaccharyltransferase complex catalytic subunit A part_of ISS UniProt GO_REF:0000024 NCBI chr 9:52,726,794...52,754,671
Ensembl chr 9:52,704,601...52,790,663
JBrowse link
procollagen-proline 4-dioxygenase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G P4HA1 prolyl 4-hydroxylase subunit alpha 1 part_of ISO (MGI:72931|PMID:7753822) MGI PMID:7753822 MGI:72931 NCBI chr14:75,827,207...75,919,121
Ensembl chr14:75,825,140...75,918,917
JBrowse link
G P4HA2 prolyl 4-hydroxylase subunit alpha 2 part_of ISO (MGI:72931|PMID:7753822) MGI PMID:7753822 MGI:72931 NCBI chr 2:134,502,210...134,595,444
Ensembl chr 2:134,502,210...134,595,430
JBrowse link
G P4HB prolyl 4-hydroxylase subunit beta part_of IEA Ensembl GO_REF:0000107 NCBI chr12:1,121,816...1,131,291
Ensembl chr12:1,121,793...1,131,291
JBrowse link
ryanodine receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RYR1 ryanodine receptor 1 part_of ISS UniProt GO_REF:0000024 NCBI chr 6:47,339,759...47,458,457 JBrowse link
Sec61 translocon complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARL6IP1 ADP ribosylation factor like GTPase 6 interacting protein 1 part_of IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 3:26,759,365...26,770,325
Ensembl chr 3:26,722,193...26,770,322
JBrowse link
G SEC61A1 SEC61 translocon subunit alpha 1 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:72,254,462...72,276,484
Ensembl chr13:72,254,464...72,365,493
JBrowse link
G SEC61A2 SEC61 translocon subunit alpha 2 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:59,790,073...59,817,039
Ensembl chr10:59,773,849...59,817,014
JBrowse link
G SEC61B SEC61 translocon subunit beta part_of IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 1:240,985,173...240,991,820
Ensembl chr 1:240,985,160...240,992,977
JBrowse link
G SSR4 signal sequence receptor subunit 4 ISO RGD PMID:7916687 RGD:61758 NCBI chr  X:124,537,545...124,541,635
Ensembl chr  X:124,537,539...124,541,638
JBrowse link
Sec62/Sec63 complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC63 SEC63 homolog, protein translocation regulator part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:74,003,428...74,078,605
Ensembl chr 1:74,000,684...74,078,582
JBrowse link
serine C-palmitoyltransferase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 part_of ISO (PMID:19416851) UniProt PMID:19416851 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,969...3,138,103
JBrowse link
G SPTLC2 serine palmitoyltransferase long chain base subunit 2 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:100,545,360...100,638,973
Ensembl chr 7:100,544,478...100,638,907
JBrowse link
G SPTLC3 serine palmitoyltransferase long chain base subunit 3 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:21,769,388...21,903,269
Ensembl chr17:21,769,484...21,903,269
JBrowse link
G SPTSSA serine palmitoyltransferase small subunit A part_of ISO (PMID:19416851) UniProt PMID:19416851 NCBI chr 7:65,302,887...65,325,877 JBrowse link
G SPTSSB serine palmitoyltransferase small subunit B part_of IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr13:101,023,238...101,059,917
Ensembl chr13:101,023,812...101,059,885
JBrowse link
signal peptidase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC11A SEC11 homolog A, signal peptidase complex subunit part_of IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:52,829,267...52,872,008
Ensembl chr 7:52,829,262...52,875,623
JBrowse link
G SEC11C SEC11 homolog C, signal peptidase complex subunit part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:161,754,857...161,769,622
Ensembl chr 1:161,754,863...161,769,526
JBrowse link
G SPCS1 signal peptidase complex subunit 1 part_of IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr13:34,839,921...34,841,605
Ensembl chr13:34,839,383...34,841,605
JBrowse link
G SPCS2 signal peptidase complex subunit 2 part_of IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 9:9,280,517...9,305,606
Ensembl chr 9:9,280,397...9,305,599
JBrowse link
G SPCS3 signal peptidase complex subunit 3 part_of IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr15:38,790,605...38,802,641
Ensembl chr15:38,790,655...38,802,635
JBrowse link
signal recognition particle receptor complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SRPRA SRP receptor subunit alpha part_of IEA InterPro GO_REF:0000002 NCBI chr 9:53,358,522...53,365,085
Ensembl chr 9:53,358,531...53,375,548
JBrowse link
G SRPRB SRP receptor subunit beta part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:74,976,030...75,010,200
Ensembl chr13:74,975,418...75,010,212
JBrowse link
SPOTS complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:94,359,784...94,377,331
Ensembl chr15:94,359,333...94,377,303
JBrowse link
G ORMDL2 ORMDL sphingolipid biosynthesis regulator 2 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:21,262,134...21,264,689
Ensembl chr 5:21,262,193...21,264,687
JBrowse link
G ORMDL3 ORMDL sphingolipid biosynthesis regulator 3 part_of IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr12:22,411,130...22,417,744
Ensembl chr12:22,411,259...22,429,621
JBrowse link
G SPTLC1 serine palmitoyltransferase long chain base subunit 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr14:3,081,964...3,138,113
Ensembl chr14:3,081,969...3,138,103
JBrowse link
SREBP-SCAP-Insig complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INSIG1 insulin induced gene 1 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:2,885,494...2,898,758
Ensembl chr18:2,885,611...2,898,767
JBrowse link
G INSIG2 insulin induced gene 2 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:23,676,684...23,699,591
Ensembl chr15:23,676,683...23,699,585
JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 5:6,719,484...6,784,724
Ensembl chr 5:6,719,487...6,784,672
JBrowse link
Ssh1 translocon complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SEC61G SEC61 translocon subunit gamma part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:139,128,287...139,135,831
Ensembl chr 9:139,127,473...139,135,407
JBrowse link
TAP complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDIA3 protein disulfide isomerase family A member 3 ISO RGD PMID:9637924 RGD:9999147 NCBI chr 1:127,786,174...127,814,096
Ensembl chr 1:127,785,772...127,814,196
JBrowse link
G TAP1 transporter 1, ATP binding cassette subfamily B member part_of IEA
ISO
Ensembl
RGD
InterPro
PMID:11595746 PMID:14622282 GO_REF:0000002 GO_REF:0000107 RGD:1300480 RGD:2312377 NCBI chr 7:25,062,772...25,071,989
Ensembl chr 7:25,062,773...25,071,862
JBrowse link
G TAP2 transporter 2, ATP binding cassette subfamily B member part_of IEA
ISO
InterPro
RGD
PMID:11595746 GO_REF:0000002 RGD:2312377 NCBI chr 7:25,045,085...25,056,915 JBrowse link
UDP-N-acetylglucosamine transferase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALG14 ALG14 UDP-N-acetylglucosaminyltransferase subunit part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:122,343,345...122,464,301
Ensembl chr 4:122,343,405...122,459,131
JBrowse link
G EXT2 exostosin glycosyltransferase 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:18,099,790...18,239,229
Ensembl chr 2:18,100,379...18,232,025
JBrowse link
VCP-NPL4-UFD1 AAA ATPase complex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FAF1 Fas associated factor 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 6:161,173,915...161,603,731
Ensembl chr 6:161,166,996...161,603,725
JBrowse link
G FAF2 Fas associated factor family member 2 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:81,401,852...81,454,272
Ensembl chr 2:81,401,862...81,464,727
JBrowse link
G NPLOC4 NPL4 homolog, ubiquitin recognition factor part_of IEA Ensembl GO_REF:0000107 NCBI chr12:1,251,377...1,285,668
Ensembl chr12:1,251,053...1,285,666
JBrowse link
G RNF125 ring finger protein 125 part_of IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:115,857,697...115,905,550
Ensembl chr 6:115,857,084...115,903,696
JBrowse link
G UBXN1 UBX domain protein 1 part_of IEA Ensembl GO_REF:0000107 NCBI chr 2:9,072,549...9,075,595
Ensembl chr 2:9,072,962...9,075,595
JBrowse link
G UBXN7 UBX domain protein 7 part_of ISO (PMID:18775313) BHF-UCL PMID:18775313 NCBI chr13:133,689,783...133,753,605 JBrowse link
G UFD1 ubiquitin recognition factor in ER associated degradation 1 part_of IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr14:51,113,858...51,132,820
Ensembl chr14:51,113,713...51,133,072
JBrowse link
G VCP valosin containing protein part_of IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,796,446...235,876,321
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 16954
    protein-containing complex 4996
      endoplasmic reticulum protein-containing complex 121
        Derlin-1 retrotranslocation complex 8
        Derlin-1-VIMP complex 2
        Dsl1/NZR complex 3
        EMC complex 10
        ER ubiquitin ligase complex + 9
        ERMES complex 0
        GET complex 3
        GPI-anchor transamidase complex 5
        IRE1-TRAF2-ASK1 complex 5
        Ig heavy chain-bound endoplasmic reticulum chaperone complex 0
        Ire1 complex 0
        MHC class I peptide loading complex + 8
        SREBP-SCAP-Insig complex 3
        Sec62/Sec63 complex 1
        TAP complex 3
        Tapasin-ERp57 complex 0
        UDP-N-acetylglucosamine transferase complex 2
        VCP-NPL4-UFD1 AAA ATPase complex 8
        dolichyl-phosphate-mannose-protein mannosyltransferase complex + 0
        egasyn-beta-glucuronidase complex 0
        endoplasmic reticulum Sec complex + 1
        endoplasmic reticulum chaperone complex 11
        endoplasmic reticulum palmitoyltransferase complex + 8
        fatty acid elongase complex 2
        glucosidase II complex 2
        glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex 8
        glycosylphosphatidylinositol-mannosyltransferase I complex 0
        glycosylphosphatidylinositol-mannosyltransferase II complex 0
        luminal surveillance complex 0
        mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
        oligosaccharyltransferase complex + 13
        phospholamban complex 0
        procollagen-proline 4-dioxygenase complex + 3
        ryanodine receptor complex 1
        signal peptidase complex 5
        signal recognition particle receptor complex 2
        translocon complex + 6
Path 2
Term Annotations click to browse term
  cellular_component 16954
    cellular anatomical entity 16825
      organelle 11547
        membrane-bounded organelle 10609
          intracellular membrane-bounded organelle 10160
            endoplasmic reticulum 1507
              endoplasmic reticulum protein-containing complex 121
                Derlin-1 retrotranslocation complex 8
                Derlin-1-VIMP complex 2
                Dsl1/NZR complex 3
                EMC complex 10
                ER ubiquitin ligase complex + 9
                ERMES complex 0
                GET complex 3
                GPI-anchor transamidase complex 5
                IRE1-TRAF2-ASK1 complex 5
                Ig heavy chain-bound endoplasmic reticulum chaperone complex 0
                Ire1 complex 0
                MHC class I peptide loading complex + 8
                SREBP-SCAP-Insig complex 3
                Sec62/Sec63 complex 1
                TAP complex 3
                Tapasin-ERp57 complex 0
                UDP-N-acetylglucosamine transferase complex 2
                VCP-NPL4-UFD1 AAA ATPase complex 8
                dolichyl-phosphate-mannose-protein mannosyltransferase complex + 0
                egasyn-beta-glucuronidase complex 0
                endoplasmic reticulum Sec complex + 1
                endoplasmic reticulum chaperone complex 11
                endoplasmic reticulum palmitoyltransferase complex + 8
                fatty acid elongase complex 2
                glucosidase II complex 2
                glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex 8
                glycosylphosphatidylinositol-mannosyltransferase I complex 0
                glycosylphosphatidylinositol-mannosyltransferase II complex 0
                luminal surveillance complex 0
                mannosyl-oligosaccharide 1,2-alpha-mannosidase complex 0
                oligosaccharyltransferase complex + 13
                phospholamban complex 0
                procollagen-proline 4-dioxygenase complex + 3
                ryanodine receptor complex 1
                signal peptidase complex 5
                signal recognition particle receptor complex 2
                translocon complex + 6
paths to the root