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ONTOLOGY REPORT - ANNOTATIONS


Term:reciprocal homologous recombination
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Accession:GO:0140527 term browser browse the term
Definition:A DNA recombination process that results in the bidirectional exchange of genetic material between highly homologous DNA molecules.


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chiasma assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO (MGI:5700253|PMID:26490168) MGI PMID:26490168 MGI:5700253 NCBI chrNW_004955451:2,705,834...2,820,610
Ensembl chrNW_004955451:2,707,793...2,818,592
JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 acts_upstream_of_or_within
involved_in
ISO (MGI:3757893|PMID:17784788)
(MGI:5545848|PMID:24390283)
MGI
UniProt
PMID:17784788 PMID:24390283 MGI:3757893 MGI:5545848 NCBI chrNW_004955550:1,108,764...1,138,862
Ensembl chrNW_004955550:1,108,449...1,138,862
JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (MGI:5545848|PMID:24390283) UniProt PMID:24390283 MGI:5545848 NCBI chrNW_004955514:525,430...559,037
Ensembl chrNW_004955514:525,085...559,153
JBrowse link
G Sycp1 synaptonemal complex protein 1 acts_upstream_of_or_within ISO (MGI:5315075|PMID:22164254) MGI PMID:22164254 MGI:5315075 NCBI chrNW_004955435:18,157,173...18,291,732 JBrowse link
G Sycp3 synaptonemal complex protein 3 acts_upstream_of_or_within
involved_in
ISO (MGI:5315075|PMID:22164254)
(MGI:2179610|PMID:12004129)
MGI
UniProt
PMID:12004129 PMID:22164254 MGI:2179610 MGI:5315075 NCBI chrNW_004955405:37,093,330...37,102,789
Ensembl chrNW_004955405:37,093,652...37,102,856
JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO (MGI:3774244|PMID:18316482) MGI PMID:18316482 MGI:3774244 NCBI chrNW_004955475:10,057,708...10,432,087 JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B acts_upstream_of_or_within ISO (MGI:2450033|PMID:12556476) MGI PMID:12556476 MGI:2450033 NCBI chrNW_004955408:5,552,619...5,572,145
Ensembl chrNW_004955408:5,552,619...5,572,145
JBrowse link
double-strand break repair involved in meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO (MGI:5700253|PMID:26490168) MGI PMID:26490168 MGI:5700253 NCBI chrNW_004955451:2,705,834...2,820,610
Ensembl chrNW_004955451:2,707,793...2,818,592
JBrowse link
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (MGI:6443349|PMID:32463460), (MGI:6447091|PMID:32345962), (MGI:6448646|PMID:32460033) UniProt PMID:32345962 PMID:32460033 PMID:32463460 MGI:6443349 MGI:6447091 MGI:6448646 NCBI chrNW_004955415:32,652,978...32,667,873 JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO (MGI:7366887|PMID:17639081) UniProt PMID:17639081 MGI:7366887 NCBI chrNW_004955413:24,685,311...24,724,269
Ensembl chrNW_004955413:24,684,073...24,724,344
JBrowse link
G Hsf2bp heat shock transcription factor 2 binding protein involved_in ISO (MGI:6283956|PMID:30760716), (MGI:6443349|PMID:32463460), (MGI:6447091|PMID:32345962), (MGI:6456264|PMID:31242413) UniProt PMID:30760716 PMID:31242413 PMID:32345962 PMID:32463460 MGI:6283956 MGI:6443349 MGI:6447091 MGI:6456264 NCBI chrNW_004955407:38,577,463...38,671,929
Ensembl chrNW_004955407:38,577,789...38,671,929
JBrowse link
G Majin membrane anchored junction protein acts_upstream_of_or_within ISO (MGI:6277530|PMID:30718482) MGI PMID:30718482 MGI:6277530 NCBI chrNW_004955422:20,216,773...20,249,042 JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 acts_upstream_of_or_within ISO (MGI:5805564|PMID:27760146) MGI PMID:27760146 MGI:5805564 NCBI chrNW_004955444:12,348,537...12,382,769
Ensembl chrNW_004955444:12,348,543...12,382,769
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (MGI:7366889|PMID:15834424) UniProt PMID:15834424 MGI:7366889 NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO (MGI:5805564|PMID:27760146) MGI PMID:27760146 MGI:5805564 NCBI chrNW_004955445:2,088,144...2,103,385
Ensembl chrNW_004955445:2,088,144...2,103,385
JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 acts_upstream_of_or_within ISO (MGI:6277530|PMID:30718482) MGI PMID:30718482 MGI:6277530 NCBI chrNW_004955433:23,290,030...23,332,886
Ensembl chrNW_004955433:23,288,825...23,333,151
JBrowse link
G Terb2 telomere repeat binding bouquet formation protein 2 acts_upstream_of_or_within ISO (MGI:6277530|PMID:30718482) MGI PMID:30718482 MGI:6277530 NCBI chrNW_004955409:8,352,685...8,371,576
Ensembl chrNW_004955409:8,352,685...8,371,529
JBrowse link
meiotic DNA double-strand break formation involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 involved_in ISO (MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) UniProt PMID:31000436 PMID:31003867 MGI:6316415 MGI:6316551 NCBI chrNW_004955425:25,483,400...25,647,904
Ensembl chrNW_004955425:25,483,715...25,626,546
JBrowse link
meiotic DNA double-strand break processing involved in reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brip1 BRCA1 interacting helicase 1 acts_upstream_of_or_within ISO (MGI:5700253|PMID:26490168) MGI PMID:26490168 MGI:5700253 NCBI chrNW_004955451:2,705,834...2,820,610
Ensembl chrNW_004955451:2,707,793...2,818,592
JBrowse link
G CUNH14orf39 chromosome unknown C14orf39 homolog involved_in ISO (MGI:5822939|PMID:27796301) UniProt PMID:27796301 MGI:5822939 NCBI chrNW_004955466:9,158,022...9,194,088
Ensembl chrNW_004955466:9,157,944...9,195,226
JBrowse link
positive regulation of reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996711) UniProt PMID:17996711 NCBI chrNW_004955413:2,335,431...2,362,781
Ensembl chrNW_004955413:2,334,911...2,361,806
JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B acts_upstream_of_or_within ISO (MGI:2450033|PMID:12556476) MGI PMID:12556476 MGI:2450033 NCBI chrNW_004955408:5,552,619...5,572,145
Ensembl chrNW_004955408:5,552,619...5,572,145
JBrowse link
reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brme1 break repair meiotic recombinase recruitment factor 1 involved_in ISO (MGI:6447091|PMID:32345962) UniProt PMID:32345962 MGI:6447091 NCBI chrNW_004955415:32,652,978...32,667,873 JBrowse link
G Ccnb1ip1 cyclin B1 interacting protein 1 involved_in ISO (MGI:5545848|PMID:24390283) UniProt PMID:24390283 MGI:5545848 NCBI chrNW_004955550:1,108,764...1,138,862
Ensembl chrNW_004955550:1,108,449...1,138,862
JBrowse link
G Cep63 centrosomal protein 63 acts_upstream_of_or_within ISO (MGI:5662131|PMID:26158450) MGI PMID:26158450 MGI:5662131 NCBI chrNW_004955501:4,032,281...4,095,990
Ensembl chrNW_004955501:4,032,223...4,095,970
JBrowse link
G Chtf18 chromosome transmission fidelity factor 18 acts_upstream_of_or_within ISO (MGI:5470363|PMID:23133398) MGI PMID:23133398 MGI:5470363 NCBI chrNW_004955442:16,414,564...16,423,386 JBrowse link
G Cntd1 cyclin N-terminal domain containing 1 acts_upstream_of_or_within ISO (MGI:5606256|PMID:24891606) MGI PMID:24891606 MGI:5606256 NCBI chrNW_004955451:16,608,810...16,617,095
Ensembl chrNW_004955451:16,608,934...16,616,086
JBrowse link
G CUNH1orf146 chromosome unknown C1orf146 homolog involved_in ISO (MGI:6478065|PMID:30746471) UniProt PMID:30746471 MGI:6478065 NCBI chrNW_004955423:2,233,445...2,251,205
Ensembl chrNW_004955423:2,233,543...2,258,941
JBrowse link
G Dmc1 DNA meiotic recombinase 1 involved_in ISO (PMID:21307306)
(MGI:7366887|PMID:17639081)
UniProt PMID:17639081 PMID:21307306 MGI:7366887 NCBI chrNW_004955413:24,685,311...24,724,269
Ensembl chrNW_004955413:24,684,073...24,724,344
JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO (MGI:1340178|PMID:10385520), (MGI:3612347|PMID:16307920), (MGI:81751|PMID:8673133) MGI PMID:8673133 PMID:10385520 PMID:16307920 MGI:1340178 MGI:3612347 MGI:81751 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
G Mnd1 meiotic nuclear divisions 1 involved_in ISO (PMID:16407260) ComplexPortal PMID:16407260 NCBI chrNW_004955471:7,701,962...7,768,941
Ensembl chrNW_004955471:7,706,346...7,760,031
JBrowse link
G Psmc3ip PSMC3 interacting protein involved_in ISO (PMID:16407260) ComplexPortal PMID:16407260 NCBI chrNW_004955451:16,464,233...16,467,896
Ensembl chrNW_004955451:16,464,233...16,467,896
JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (MGI:7366889|PMID:15834424) UniProt PMID:15834424 MGI:7366889 NCBI chrNW_004955416:7,566,715...7,590,628
Ensembl chrNW_004955416:7,566,686...7,590,628
JBrowse link
G Rad51c RAD51 paralog C acts_upstream_of_or_within ISO (MGI:3703317|PMID:17312021) MGI PMID:17312021 MGI:3703317 NCBI chrNW_004955451:4,053,195...4,178,226
Ensembl chrNW_004955451:4,145,226...4,178,487
JBrowse link
G Rnf212 ring finger protein 212 involved_in ISO (MGI:5487470|PMID:23396135), (MGI:5545848|PMID:24390283) UniProt PMID:23396135 PMID:24390283 MGI:5487470 MGI:5545848 NCBI chrNW_004955514:525,430...559,037
Ensembl chrNW_004955514:525,085...559,153
JBrowse link
G Shoc1 shortage in chiasmata 1 involved_in ISO (MGI:6272683|PMID:30272023) UniProt PMID:30272023 MGI:6272683 NCBI chrNW_004955419:15,563,949...15,644,502
Ensembl chrNW_004955419:15,566,339...15,646,184
JBrowse link
G Spo11 SPO11 initiator of meiotic double strand breaks acts_upstream_of_or_within ISO (MGI:3612347|PMID:16307920) MGI PMID:16307920 MGI:3612347 NCBI chrNW_004955445:2,088,144...2,103,385
Ensembl chrNW_004955445:2,088,144...2,103,385
JBrowse link
G Syce3 synaptonemal complex central element protein 3 involved_in ISO (MGI:5008660|PMID:21637789) UniProt PMID:21637789 MGI:5008660 NCBI chrNW_004955413:33,537,646...33,573,787
Ensembl chrNW_004955413:33,537,753...33,563,373
JBrowse link
G Sycp1 synaptonemal complex protein 1 involved_in ISO (MGI:3579731|PMID:15937223) UniProt PMID:15937223 MGI:3579731 NCBI chrNW_004955435:18,157,173...18,291,732 JBrowse link
G Tex11 testis expressed 11 involved_in ISO (MGI:3797180|PMID:18369460) UniProt PMID:18369460 MGI:3797180 NCBI chrNW_004955475:10,057,708...10,432,087 JBrowse link
G Top6bl TOP6B like initiator of meiotic double strand breaks involved_in ISO (MGI:5752405|PMID:26917764) UniProt PMID:26917764 MGI:5752405 NCBI chrNW_004955422:18,541,350...18,726,269 JBrowse link
G Trip13 thyroid hormone receptor interactor 13 acts_upstream_of_or_within
involved_in
ISO (MGI:3719060|PMID:17696610)
(MGI:4821667|PMID:20711356)
MGI
UniProt
PMID:17696610 PMID:20711356 MGI:3719060 MGI:4821667 NCBI chrNW_004955504:434,187...452,636
Ensembl chrNW_004955504:434,159...452,671
JBrowse link
G Ubr2 ubiquitin protein ligase E3 component n-recognin 2 involved_in ISO (MGI:5908463|PMID:28708824) UniProt PMID:28708824 MGI:5908463 NCBI chrNW_004955437:8,678,212...8,780,700
Ensembl chrNW_004955437:8,677,801...8,782,120
JBrowse link
resolution of meiotic recombination intermediates term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cenps centromere protein S involved_in ISO (PMID:20347428) UniProt PMID:20347428 NCBI chrNW_004955486:3,157,535...3,167,424
Ensembl chrNW_004955486:3,157,535...3,167,397
JBrowse link
G Cenpx centromere protein X involved_in ISO (PMID:20347428) UniProt PMID:20347428 NCBI chrNW_004955506:1,149,566...1,151,919
Ensembl chrNW_004955506:1,149,566...1,151,919
JBrowse link
G Fancm FA complementation group M involved_in ISO (PMID:20347428) UniProt PMID:20347428 NCBI chrNW_004955409:16,751,658...16,809,352 JBrowse link
G Hfm1 helicase for meiosis 1 acts_upstream_of_or_within ISO (MGI:5477835|PMID:23555294) MGI PMID:23555294 MGI:5477835 NCBI chrNW_004955423:2,993,723...3,088,391
Ensembl chrNW_004955423:2,993,682...3,089,024
JBrowse link
G Meiob meiosis specific with OB-fold involved_in ISO (MGI:5527015|PMID:24068956), (MGI:5538413|PMID:24240703) UniProt PMID:24068956 PMID:24240703 MGI:5527015 MGI:5538413 NCBI chrNW_004955442:15,409,344...15,444,996
Ensembl chrNW_004955442:15,409,344...15,444,996
JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO (MGI:1340178|PMID:10385520), (MGI:2386157|PMID:12217320) MGI PMID:10385520 PMID:12217320 MGI:1340178 MGI:2386157 NCBI chrNW_004955421:3,890,291...3,936,892
Ensembl chrNW_004955421:3,890,306...3,936,526
JBrowse link
G Shoc1 shortage in chiasmata 1 involved_in ISO (MGI:6159552|PMID:29742103) UniProt PMID:29742103 MGI:6159552 NCBI chrNW_004955419:15,563,949...15,644,502
Ensembl chrNW_004955419:15,566,339...15,646,184
JBrowse link
G Tex11 testis expressed 11 acts_upstream_of_or_within ISO (MGI:3774244|PMID:18316482) MGI PMID:18316482 MGI:3774244 NCBI chrNW_004955475:10,057,708...10,432,087 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12307
    metabolic process 7442
      organic substance metabolic process 7123
        macromolecule metabolic process 5985
          nucleic acid metabolic process 3370
            DNA metabolic process 759
              DNA recombination 253
                homologous recombination 38
                  reciprocal homologous recombination 37
                    reciprocal meiotic recombination + 37
Path 2
Term Annotations click to browse term
  biological_process 12307
    metabolic process 7442
      cellular metabolic process 6653
        cellular aromatic compound metabolic process 3928
          nucleobase-containing compound metabolic process 3736
            nucleic acid metabolic process 3370
              DNA metabolic process 759
                DNA recombination 253
                  homologous recombination 38
                    reciprocal homologous recombination 37
                      reciprocal meiotic recombination + 37
paths to the root