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ONTOLOGY REPORT - ANNOTATIONS


Term:antiviral innate immune response
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Accession:GO:0140374 term browser browse the term
Definition:A defense response against viruses mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.



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antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap1 A kinase anchor protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:88,721,618...88,755,426
Ensembl chr11:88,721,618...88,755,412
JBrowse link
G Atad3a ATPase family, AAA domain containing 3A involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chr 4:155,825,097...155,845,579
Ensembl chr 4:155,825,098...155,845,550
JBrowse link
G Clpb ClpB caseinolytic peptidase B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:101,312,958...101,444,667
Ensembl chr 7:101,312,840...101,444,713
JBrowse link
G Dhx15 DEAH-box helicase 15 involved_in IMP
IDA
ISO
(MGI:5699624|PMID:26494172)
(MGI:6833928|PMID:34678144)
UniProt
MGI
PMID:26494172 PMID:34678144 GO_REF:0000119 MGI:4834177 MGI:5699624 MGI:6833928 NCBI chr 5:52,307,545...52,347,888
Ensembl chr 5:52,307,545...52,347,856
JBrowse link
G Dhx16 DEAH-box helicase 16 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:36,190,657...36,203,562
Ensembl chr17:36,190,711...36,203,562
JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IBA (MGI:6201960|PMID:21873635) GO_Central PMID:21873635 MGI:6201960 NCBI chr11:100,585,710...100,595,165
Ensembl chr11:100,585,710...100,595,097
JBrowse link
G Dus2 dihydrouridine synthase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:106,738,110...106,780,472
Ensembl chr 8:106,717,969...106,780,472
JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2-alpha kinase 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:79,157,933...79,190,001
Ensembl chr17:79,159,993...79,190,002
JBrowse link
G Hcfc2 host cell factor C2 acts_upstream_of_or_within IMP (MGI:5923623|PMID:28970238) MGI PMID:28970238 MGI:5923623 NCBI chr10:82,534,841...82,631,699
Ensembl chr10:82,531,994...82,578,262
JBrowse link
G Ifih1 interferon induced with helicase C domain 1 acts_upstream_of_or_within
involved_in
IMP
IBA
(MGI:5882427|PMID:28031478)
(MGI:6201960|PMID:21873635)
MGI
GO_Central
PMID:21873635 PMID:28031478 MGI:5882427 MGI:6201960 NCBI chr 2:62,426,137...62,476,599
Ensembl chr 2:62,426,142...62,476,599
JBrowse link
G Ifit2 interferon-induced protein with tetratricopeptide repeats 2 acts_upstream_of_or_within
involved_in
IDA
ISO
(MGI:6370296|PMID:31390091) MGI PMID:31390091 GO_REF:0000119 MGI:4834177 MGI:6370296 NCBI chr19:34,527,961...34,553,934
Ensembl chr19:34,528,094...34,553,819
JBrowse link
G Ifit3 interferon-induced protein with tetratricopeptide repeats 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:34,560,519...34,566,382
Ensembl chr19:34,560,931...34,566,131
JBrowse link
G Ifit3b interferon-induced protein with tetratricopeptide repeats 3B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:34,584,945...34,590,801
Ensembl chr19:34,585,370...34,590,801
JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:44,647,072...44,652,272
Ensembl chr 7:44,647,072...44,652,272
JBrowse link
G Lrrc55os leucine rich repeat containing 55, opposite strand involved_in IMP (MGI:6452538|PMID:31213650) MGI PMID:31213650 MGI:6452538 Ensembl chr 2:84,991,122...85,023,669 JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 involved_in IMP (MGI:6472811|PMID:32935379) UniProt PMID:32935379 MGI:6472811 NCBI chr17:33,904,666...33,937,651
Ensembl chr17:33,904,666...33,937,644
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:131,075,445...131,089,945
Ensembl chr 2:131,075,983...131,089,945
JBrowse link
G Mbl2 mannose-binding lectin (protein C) 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:30,210,306...30,217,087
Ensembl chr19:30,210,342...30,217,087
JBrowse link
G Morc3 microrchidia 3 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:93,629,009...93,672,964
Ensembl chr16:93,629,009...93,672,961
JBrowse link
G Nck1 non-catalytic region of tyrosine kinase adaptor protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:100,376,047...100,428,187
Ensembl chr 9:100,374,346...100,428,187
JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:70,982,023...71,035,780
Ensembl chr11:70,983,062...71,035,530
JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:71,043,400...71,133,340
Ensembl chr11:71,043,928...71,121,559
JBrowse link
G Nlrp6 NLR family, pyrin domain containing 6 involved_in IDA
IMP
ISO
(MGI:6833928|PMID:34678144)
(MGI:5699624|PMID:26494172)
UniProt
MGI
PMID:26494172 PMID:34678144 GO_REF:0000119 MGI:4834177 MGI:5699624 MGI:6833928 NCBI chr 7:140,500,777...140,509,105
Ensembl chr 7:140,500,815...140,509,105
JBrowse link
G Nmb neuromedin B involved_in IDA (MGI:6435299|PMID:31601264) UniProt PMID:31601264 MGI:6435299 NCBI chr 7:80,551,975...80,554,810
Ensembl chr 7:80,551,975...80,554,824
JBrowse link
G Nmbr neuromedin B receptor involved_in IMP
ISO
(MGI:6435299|PMID:31601264) UniProt
MGI
PMID:31601264 GO_REF:0000119 MGI:4834177 MGI:6435299 NCBI chr10:14,634,894...14,647,202
Ensembl chr10:14,581,335...14,646,594
JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:121,034,319...121,045,588
Ensembl chr 5:121,034,319...121,045,584
JBrowse link
G Oas1b 2'-5' oligoadenylate synthetase 1B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:120,950,700...120,962,228
Ensembl chr 5:120,950,700...120,962,228
JBrowse link
G Oas1c 2'-5' oligoadenylate synthetase 1C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:120,938,259...120,950,605
Ensembl chr 5:120,938,259...120,950,579
JBrowse link
G Oas1d 2'-5' oligoadenylate synthetase 1D involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:121,052,881...121,059,711
Ensembl chr 5:121,052,599...121,059,715
JBrowse link
G Oas1e 2'-5' oligoadenylate synthetase 1E involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:120,924,377...120,933,595
Ensembl chr 5:120,924,291...120,933,595
JBrowse link
G Oas1f 2'-5' oligoadenylate synthetase 1F involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:120,985,432...120,996,049
Ensembl chr 5:120,985,432...120,996,049
JBrowse link
G Oas1g 2'-5' oligoadenylate synthetase 1G involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:121,014,205...121,025,676
Ensembl chr 5:121,014,205...121,025,676
JBrowse link
G Oas1h 2'-5' oligoadenylate synthetase 1H involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:120,999,485...121,011,569
Ensembl chr 5:120,999,484...121,011,569
JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:26,381,113...26,390,823
Ensembl chr14:26,381,113...26,391,038
JBrowse link
G Phb1 prohibitin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:95,557,783...95,571,599
Ensembl chr11:95,557,783...95,571,599
JBrowse link
G Phb2 prohibitin 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:124,689,252...124,693,908
Ensembl chr 6:124,689,299...124,693,913
JBrowse link
G Prkra protein kinase, interferon inducible double stranded RNA dependent activator involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:76,436,385...76,478,614
Ensembl chr 2:76,460,242...76,478,359
JBrowse link
G Rigi RNA sensor RIG-I involved_in ISO
IBA
(MGI:6201960|PMID:21873635) MGI
GO_Central
PMID:21873635 GO_REF:0000119 MGI:4834177 MGI:6201960 NCBI chr 4:40,203,775...40,239,843
Ensembl chr 4:40,203,773...40,239,828
JBrowse link
G Rnf135 ring finger protein 135 involved_in IMP
ISO
(MGI:6152590|PMID:21147464), (MGI:6155526|PMID:23950712) UniProt
MGI
PMID:21147464 PMID:23950712 GO_REF:0000119 MGI:4834177 MGI:6152590 MGI:6155526 NCBI chr11:80,074,652...80,090,581
Ensembl chr11:80,074,677...80,090,583
JBrowse link
G Senp7 SUMO1/sentrin specific peptidase 7 involved_in IDA (MGI:5918130|PMID:28095500) UniProt PMID:28095500 MGI:5918130 NCBI chr16:55,869,306...56,010,394
Ensembl chr16:55,868,701...56,010,375
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:35,866,731...35,873,607
Ensembl chr18:35,866,732...35,873,607
JBrowse link
G Tbk1 TANK-binding kinase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:121,382,360...121,422,699
Ensembl chr10:121,382,360...121,422,692
JBrowse link
G Tnf tumor necrosis factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 acts_upstream_of_or_within IMP (MGI:6370296|PMID:31390091) MGI PMID:31390091 MGI:6370296 NCBI chr 1:192,857,812...192,883,854
Ensembl chr 1:192,857,761...192,884,011
JBrowse link
G Traf6 TNF receptor-associated factor 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:101,508,765...101,532,013
Ensembl chr 2:101,508,774...101,532,014
JBrowse link
G Trim25 tripartite motif-containing 25 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:88,890,194...88,911,119
Ensembl chr11:88,890,202...88,911,119
JBrowse link
G Trim31 tripartite motif-containing 31 involved_in IMP
ISO
(MGI:6306832|PMID:27992402) UniProt
MGI
PMID:27992402 GO_REF:0000119 MGI:4834177 MGI:6306832 NCBI chr17:37,209,022...37,221,109
Ensembl chr17:37,209,010...37,221,106
JBrowse link
G Trim6 tripartite motif-containing 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:103,868,002...103,884,359
Ensembl chr 7:103,868,000...103,884,359
JBrowse link
G Trim65 tripartite motif-containing 65 acts_upstream_of_or_within IMP (MGI:5882427|PMID:28031478) MGI PMID:28031478 MGI:5882427 NCBI chr11:116,008,015...116,022,239
Ensembl chr11:116,012,672...116,021,954
JBrowse link
G Trim7 tripartite motif-containing 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:48,716,965...48,742,019
Ensembl chr11:48,716,967...48,743,036
JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:169,967,473...170,002,358
Ensembl chr 1:169,969,507...170,002,526
JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:95,351,024...95,381,520
Ensembl chr10:95,351,007...95,381,519
JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W (putative) involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:16,611,012...16,689,676
Ensembl chr 1:16,611,014...16,689,713
JBrowse link
G Usp18 ubiquitin specific peptidase 18 involved_in ISO (PMID:27801882) UniProt PMID:27801882 NCBI chr 6:121,222,865...121,247,876
Ensembl chr 6:121,222,865...121,247,876
JBrowse link
G Usp20 ubiquitin specific peptidase 20 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:30,872,291...30,912,667
Ensembl chr 2:30,872,291...30,913,598
JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr10:93,655,831...93,696,792
Ensembl chr10:93,667,417...93,693,950
JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:173,048,405...173,060,715
Ensembl chr 2:173,048,405...173,060,716
JBrowse link
G Zdhhc1 zinc finger, DHHC domain containing 1 involved_in IMP
ISO
(MGI:6392967|PMID:25299331) UniProt
MGI
PMID:25299331 GO_REF:0000119 MGI:4834177 MGI:6392967 NCBI chr 8:106,199,055...106,223,694
Ensembl chr 8:106,199,055...106,223,534
JBrowse link
G Zdhhc11 zinc finger, DHHC domain containing 11 involved_in IMP (MGI:6414701|PMID:29429998) UniProt PMID:29429998 MGI:6414701 NCBI chr13:74,111,970...74,141,109
Ensembl chr13:74,111,970...74,141,109
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28558
    response to stimulus 10742
      immune response 2169
        innate immune response 1069
          antiviral innate immune response 59
Path 2
Term Annotations click to browse term
  biological_process 28558
    response to stimulus 10742
      response to biotic stimulus 2045
        response to external biotic stimulus 2003
          response to other organism 2000
            defense response to other organism 1402
              defense response to symbiont 1272
                innate immune response 1069
                  antiviral innate immune response 59
paths to the root