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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation protein catabolic process at synapse
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Accession:GO:0140250 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a protein at the synapse.
Comment:Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua.
Synonyms:only_in_taxon: NCBITaxon:33208 ! Metazoa


show annotations for term's descendants           Sort by:
regulation protein catabolic process at postsynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cblb Cbl proto-oncogene B involved_in ISO
IEA		 (PMID:32606037)
GO_REF:0000107		 RGD
Ensembl		 PMID:32606037 GO_REF:0000107 NCBI chr11:48,589,878...48,756,940
Ensembl chr11:48,592,703...48,756,839 		JBrowse link
G Cul3 cullin 3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:17062563)		 Ensembl
RGD		 PMID:17062563 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in IDA
IMP
IEP		 PMID:28973854 SynGO PMID:28973854 PMID:28973854 PMID:28973854 RGD:405650304, RGD:405650304, RGD:405650304 NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658 		JBrowse link
G Egln1 egl-9 family hypoxia-inducible factor 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:26972007)		 Ensembl
RGD		 PMID:26972007 GO_REF:0000107 NCBI chr19:52,867,900...52,907,308
Ensembl chr19:52,869,486...52,907,777 		JBrowse link
G Klhl17 kelch-like family member 17 involved_in IDA
IMP		 PMID:17062563 SynGO PMID:17062563 PMID:17062563 RGD:8553595, RGD:8553595 NCBI chr 5:166,813,482...166,819,949
Ensembl chr 5:166,814,110...166,818,925 		JBrowse link
G Mib2 MIB E3 ubiquitin protein ligase 2 involved_in IDA PMID:17962190 SynGO PMID:17962190 RGD:405650227 NCBI chr 5:166,243,776...166,259,944
Ensembl chr 5:166,243,776...166,259,650 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IMP
IDA
IEP		 PMID:21148011 SynGO PMID:21148011 PMID:21148011 PMID:21148011 RGD:13702142, RGD:13702142, RGD:13702142 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in ISO (PMID:28212375) RGD PMID:28212375 NCBI chr18:58,393,759...58,726,709
Ensembl chr18:58,393,509...58,723,137 		JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 involved_in ISO (PMID:28458925) RGD PMID:28458925 NCBI chr 8:19,189,408...19,200,785
Ensembl chr 8:19,189,373...19,200,785 		JBrowse link
G Plk2 polo-like kinase 2 involved_in IDA
IMP
IEP		 PMID:14576440 SynGO PMID:14576440 PMID:14576440 PMID:14576440 RGD:1299476, RGD:1299476, RGD:1299476 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEP
IMP
IDA		 PMID:28973854 SynGO PMID:28973854 PMID:28973854 PMID:28973854 RGD:405650304, RGD:405650304, RGD:405650304 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507 		JBrowse link
G Trim3 tripartite motif-containing 3 involved_in IMP
IDA
IEP		 PMID:20352094 SynGO PMID:20352094 PMID:20352094 PMID:20352094 RGD:13702372, RGD:13702372, RGD:13702372 NCBI chr 1:159,950,921...159,973,600
Ensembl chr 1:159,944,908...159,973,600 		JBrowse link
G Ube2n ubiquitin-conjugating enzyme E2N involved_in IEP
IDA
IMP		 PMID:28973854 SynGO PMID:28973854 PMID:28973854 PMID:28973854 RGD:405650304, RGD:405650304, RGD:405650304 NCBI chr 7:30,154,330...30,184,373
Ensembl chr 7:30,154,616...30,184,355 		JBrowse link
G Ube2v1 ubiquitin conjugating enzyme E2 V1 involved_in IDA
IMP
IEP		 PMID:28973854 SynGO PMID:28973854 PMID:28973854 PMID:28973854 RGD:405650304, RGD:405650304, RGD:405650304 NCBI chr 3:156,317,339...156,340,198
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Ube2v1l1 ubiquitin conjugating enzyme E2 V1 like 1 involved_in IDA
IMP
IEP		 PMID:28973854 SynGO PMID:28973854 PMID:28973854 PMID:28973854 RGD:405650304, RGD:405650304, RGD:405650304 NCBI chr14:4,703,243...4,704,962
Ensembl chr 3:156,316,781...156,340,273 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor involved_in ISO (PMID:26972007) RGD PMID:26972007 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377 		JBrowse link
regulation protein catabolic process at presynapse term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plekhg5 pleckstrin homology and RhoGEF domain containing G5 involved_in ISO (PMID:29084947) RGD PMID:29084947 NCBI chr 5:162,577,999...162,621,518
Ensembl chr 5:162,578,071...162,621,513 		JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IEA
ISO		 GO_REF:0000107
(PMID:29311685)		 Ensembl
RGD		 PMID:29311685 GO_REF:0000107 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555 		JBrowse link
G Rab26 RAB26, member RAS oncogene family involved_in ISO
IEA		 (PMID:29084947)
GO_REF:0000107		 RGD
Ensembl		 PMID:29084947 GO_REF:0000107 NCBI chr10:13,553,395...13,558,063
Ensembl chr10:13,553,395...13,558,030 		JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:25189210) RGD PMID:25189210 NCBI chr 4:157,619,663...157,634,681
Ensembl chr 4:157,619,643...157,634,711 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20075
    cellular process 19154
      metabolic process 11953
        catabolic process 2871
          regulation of catabolic process 1110
            regulation protein catabolic process at synapse 20
              regulation of protein catabolic process at synapse, modulating synaptic transmission 0
              regulation protein catabolic process at postsynapse 16
              regulation protein catabolic process at presynapse 4
Path 2
Term Annotations click to browse term
  biological_process 20075
    biological regulation 13559
      regulation of biological process 13136
        regulation of cellular process 12773
          regulation of metabolic process 6747
            regulation of catabolic process 1110
              regulation protein catabolic process at synapse 20
                regulation of protein catabolic process at synapse, modulating synaptic transmission 0
                regulation protein catabolic process at postsynapse 16
                regulation protein catabolic process at presynapse 4
paths to the root