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ONTOLOGY REPORT - ANNOTATIONS

Term:postsynaptic endocytosis
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Accession:GO:0140239 term browser browse the term
Definition:A vesicle-mediated transport process in which the postsynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.
Comment:Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua.


show annotations for term's descendants           Sort by:
postsynaptic endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm2 dynamin 2 involved_in IDA
EXP
IMP		 PMID:31597090 SynGO PMID:31597090 PMID:31597090 PMID:31597090 RGD:405650360, RGD:405650360, RGD:405650360 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157 		JBrowse link
postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in IMP
ISO
EXP
IDA
NAS		 PMID:17289840
(PMID:24217640)		 RGD PMID:24217640 PMID:17289840 PMID:17289840 PMID:17289840 PMID:17289840 RGD:13432317, RGD:13432317, RGD:13432317, RGD:13432317 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013 		JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IMP
ISO
IDA
EXP		 PMID:17289840
(PMID:24217640)		 RGD PMID:24217640 PMID:17289840 PMID:17289840 PMID:17289840 RGD:13432317, RGD:13432317, RGD:13432317 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140 		JBrowse link
G Ap2s1 adaptor related protein complex 2 subunit sigma 1 involved_in IMP
NAS
IDA
EXP		 PMID:17289840 SynGO PMID:17289840 PMID:17289840 PMID:17289840 PMID:17289840 RGD:13432317, RGD:13432317, RGD:13432317, RGD:13432317 NCBI chr 1:77,417,496...77,428,903
Ensembl chr 1:77,417,477...77,428,905 		JBrowse link
G Ap3m1 adaptor related protein complex 3 subunit mu 1 involved_in ISO (PMID:27568566) RGD PMID:27568566 NCBI chr15:3,246,616...3,264,846
Ensembl chr15:3,246,926...3,264,844 		JBrowse link
G Caly calcyon neuron-specific vesicular protein involved_in ISO (PMID:19120439) RGD PMID:19120439 NCBI chr 1:194,862,671...194,873,861
Ensembl chr 1:194,862,672...194,873,551 		JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in IDA
IEP
IMP		 PMID:25023288 SynGO PMID:25023288 PMID:25023288 PMID:25023288 RGD:13702241, RGD:13702241, RGD:13702241 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221 		JBrowse link
G Myo6 myosin VI involved_in ISO (PMID:15657400) RGD PMID:15657400 NCBI chr 8:81,087,157...81,242,022
Ensembl chr 8:81,087,139...81,239,292 		JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 involved_in ISO (PMID:25972173) RGD PMID:25972173 NCBI chr 4:117,871,301...117,908,819
Ensembl chr 4:117,871,308...117,908,741 		JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in IMP
IDA		 PMID:15629704 SynGO PMID:15629704 PMID:15629704 RGD:155230721, RGD:155230721 NCBI chr 9:6,483,906...6,512,877
Ensembl chr 9:6,484,469...6,512,873 		JBrowse link
G Rab5al1 Rab5a, member RAS oncogene family-like 1 involved_in IMP
IDA		 PMID:15629704 SynGO PMID:15629704 PMID:15629704 RGD:155230721, RGD:155230721 NCBI chr14:68,332,360...68,334,470
Ensembl chr14:68,332,558...68,333,205 		JBrowse link
G Sh3glb2 SH3 domain-containing GRB2-like endophilin B2 involved_in IDA
IEP
IMP		 PMID:26776730 SynGO PMID:26776730 PMID:26776730 PMID:26776730 RGD:11564596, RGD:11564596, RGD:11564596 NCBI chr 3:13,616,936...13,631,785
Ensembl chr 3:13,616,938...13,631,757 		JBrowse link
G Synj1 synaptojanin 1 involved_in ISO (MGI:5819348|PMID:18987319) RGD PMID:18987319 MGI:5819348 NCBI chr11:30,192,629...30,269,447
Ensembl chr11:30,192,629...30,269,220 		JBrowse link
G Tmub1 transmembrane and ubiquitin-like domain containing 1 involved_in IDA PMID:18665261 SynGO PMID:18665261 RGD:405650208 NCBI chr 4:10,729,494...10,732,060
Ensembl chr 4:10,729,250...10,732,060 		JBrowse link
regulation of postsynaptic neurotransmitter receptor internalization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap5 A-kinase anchoring protein 5 involved_in IMP
IDA		 PMID:19169250 SynGO PMID:19169250 PMID:19169250 RGD:2313185, RGD:2313185 NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578 		JBrowse link
G Arc activity-regulated cytoskeleton-associated protein involved_in ISO (PMID:17088211) RGD PMID:17088211 NCBI chr 7:106,555,968...106,559,697
Ensembl chr 7:106,555,785...106,559,378 		JBrowse link
G Atad1 ATPase family, AAA domain containing 1 involved_in ISO (PMID:21496646) RGD PMID:21496646 NCBI chr 1:230,544,227...230,610,524
Ensembl chr 1:230,544,047...230,596,548 		JBrowse link
G Cblb Cbl proto-oncogene B involved_in ISO
IEA		 (PMID:32606037)
GO_REF:0000107		 RGD
Ensembl		 PMID:32606037 GO_REF:0000107 NCBI chr11:48,589,878...48,756,940
Ensembl chr11:48,592,703...48,756,839 		JBrowse link
G Drd3 dopamine receptor D3 involved_in EXP
IEP
IDA		 PMID:16510729 SynGO PMID:16510729 PMID:16510729 PMID:16510729 RGD:13702467, RGD:13702467, RGD:13702467 NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596 		JBrowse link
G Drd4 dopamine receptor D4 involved_in IEA
ISO		 GO_REF:0000107
(PMID:18832154)		 Ensembl
RGD		 PMID:18832154 GO_REF:0000107 NCBI chr 1:196,396,366...196,400,824
Ensembl chr 1:196,396,366...196,399,553 		JBrowse link
G Efnb2 ephrin B2 involved_in ISO (PMID:19160501) RGD PMID:19160501 NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391 		JBrowse link
G Gsg1l GSG1-like involved_in ISO (PMID:26932439) RGD PMID:26932439 NCBI chr 1:180,440,398...180,654,342
Ensembl chr 1:180,442,630...180,654,134 		JBrowse link
G Hap1 huntingtin-associated protein 1 involved_in IDA
IEP
IMP		 PMID:15310851 SynGO PMID:15310851 PMID:15310851 PMID:15310851 RGD:13702182, RGD:13702182, RGD:13702182 NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126 		JBrowse link
G Hip1 huntingtin interacting protein 1 involved_in ISO (PMID:12839988) RGD PMID:12839988 NCBI chr12:21,133,364...21,267,796
Ensembl chr12:21,133,406...21,267,725 		JBrowse link
G Hpca hippocalcin involved_in IMP
IDA		 PMID:20852624 SynGO PMID:20852624 PMID:20852624 RGD:13702412, RGD:13702412 NCBI chr 5:141,455,616...141,466,252
Ensembl chr 5:141,455,613...141,463,841 		JBrowse link
G Iqsec1 IQ motif and Sec7 domain ArfGEF 1 involved_in IMP
ISO		 (PMID:20547133) RGD PMID:20547133 PMID:26884337 RGD:11560558 NCBI chr 4:123,168,719...123,488,300
Ensembl chr 4:123,168,719...123,488,172 		JBrowse link
G Itgb3 integrin subunit beta 3 involved_in ISO
IEA		 (PMID:18549786)
GO_REF:0000107		 RGD
Ensembl		 PMID:18549786 GO_REF:0000107 NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679 		JBrowse link
G Lpar1 lysophosphatidic acid receptor 1 involved_in IMP
IEP
EXP
IDA		 PMID:25996636 SynGO PMID:25996636 PMID:25996636 PMID:25996636 PMID:25996636 RGD:155230734, RGD:155230734, RGD:155230734, RGD:155230734 NCBI chr 5:73,229,047...73,347,874
Ensembl chr 5:73,229,625...73,369,895 		JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (PMID:23760271) RGD PMID:23760271 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910 		JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in EXP
IMP
IDA		 PMID:14642282 SynGO PMID:14642282 PMID:14642282 PMID:14642282 RGD:2317402, RGD:2317402, RGD:2317402 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915 		JBrowse link
G Mib2 MIB E3 ubiquitin protein ligase 2 involved_in IDA PMID:17962190 SynGO PMID:17962190 RGD:405650227 NCBI chr 5:166,243,776...166,259,944
Ensembl chr 5:166,243,776...166,259,650 		JBrowse link
G Ncdn neurochondrin involved_in ISO (PMID:34907024) RGD PMID:34907024 NCBI chr 5:139,037,807...139,047,645
Ensembl chr 5:139,037,819...139,047,568 		JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IDA
IEP
IMP		 PMID:21148011 SynGO PMID:21148011 PMID:21148011 PMID:21148011 RGD:13702142, RGD:13702142, RGD:13702142 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in ISO (PMID:28212375) RGD PMID:28212375 NCBI chr18:58,393,759...58,726,709
Ensembl chr18:58,393,509...58,723,137 		JBrowse link
G Nrg1 neuregulin 1 involved_in ISO
IEA		 (PMID:16221846)
GO_REF:0000107		 RGD
Ensembl		 PMID:16221846 GO_REF:0000107 NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884 		JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in IEA
ISO		 GO_REF:0000107
(PMID:26621723)		 Ensembl
RGD		 PMID:26621723 GO_REF:0000107 NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354 		JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO (PMID:24966368) RGD PMID:24966368 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633 		JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in IDA
IMP		 PMID:16617342
PMID:23918399		 SynGO PMID:16617342 PMID:23918399 PMID:16617342 PMID:23918399 RGD:13702454, RGD:13702399, RGD:13702454, RGD:13702399 NCBI chr20:5,718,134...5,768,064
Ensembl chr20:5,719,857...5,765,313 		JBrowse link
G Pick1 protein interacting with PRKCA 1 involved_in IMP
IEP
IDA		 PMID:28855251 SynGO PMID:28855251 PMID:28855251 PMID:28855251 RGD:13702248, RGD:13702248, RGD:13702248 NCBI chr 7:110,796,623...110,816,850
Ensembl chr 7:110,797,117...110,816,848 		JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (PMID:22243752) RGD PMID:22243752 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988 		JBrowse link
G Ppp3r1 protein phosphatase 3, regulatory subunit B, alpha involved_in ISO (PMID:11733061) RGD PMID:11733061 NCBI chr14:91,556,743...91,606,391
Ensembl chr14:91,604,121...91,606,907 		JBrowse link
G Rabep1 rabaptin, RAB GTPase binding effector protein 1 involved_in ISO
IEA		 (PMID:34564930)
GO_REF:0000107		 RGD
Ensembl		 PMID:34564930 GO_REF:0000107 NCBI chr10:55,566,156...55,667,595
Ensembl chr10:55,566,185...55,665,973 		JBrowse link
G Rala RAS like proto-oncogene A involved_in EXP
IMP
IDA		 PMID:19823667 SynGO PMID:19823667 PMID:19823667 PMID:19823667 RGD:2324918, RGD:2324918, RGD:2324918 NCBI chr17:47,092,163...47,145,192
Ensembl chr17:47,092,207...47,144,063 		JBrowse link
G Rnf216 ring finger protein 216 involved_in IMP
IDA		 PMID:24945773 SynGO PMID:24945773 PMID:24945773 RGD:11553202, RGD:11553202 NCBI chr12:11,454,752...11,576,305
Ensembl chr12:11,454,797...11,576,304 		JBrowse link
G Rnf220 ring finger protein 220 involved_in ISO (PMID:36179027) RGD PMID:36179027 NCBI chr 5:130,739,173...130,961,386
Ensembl chr 5:130,739,183...130,961,418 		JBrowse link
G Rnf34 ring finger protein 34 involved_in IMP
IDA		 PMID:25193658 SynGO PMID:25193658 PMID:25193658 RGD:10047328, RGD:10047328 NCBI chr12:33,703,655...33,724,606
Ensembl chr12:33,703,673...33,724,586 		JBrowse link
G Scrib scribble planar cell polarity protein involved_in IDA
IMP		 PMID:25310985 SynGO PMID:25310985 PMID:25310985 RGD:12050130, RGD:12050130 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331 		JBrowse link
G Sirt2 sirtuin 2 involved_in IDA
IEP
IMP
EXP		 PMID:28793258 SynGO PMID:28793258 PMID:28793258 PMID:28793258 PMID:28793258 RGD:13702139, RGD:13702139, RGD:13702139, RGD:13702139 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975 		JBrowse link
G Susd4 sushi domain containing 4 involved_in ISO (PMID:33661101) RGD PMID:33661101 NCBI chr13:94,455,180...94,577,773
Ensembl chr13:94,455,165...94,577,750 		JBrowse link
G Syne1 spectrin repeat containing nuclear envelope protein 1 involved_in IMP
IDA
IEP		 PMID:15541315 RGD
SynGO		 PMID:24191017 PMID:15541315 PMID:15541315 PMID:15541315 RGD:13209020, RGD:2314546, RGD:2314546, RGD:2314546 NCBI chr 1:41,512,146...41,983,382
Ensembl chr 1:41,512,030...41,983,322 		JBrowse link
G Synj1 synaptojanin 1 involved_in ISO (PMID:18987319) RGD PMID:18987319 NCBI chr11:30,192,629...30,269,447
Ensembl chr11:30,192,629...30,269,220 		JBrowse link
G Syt17 synaptotagmin 17 involved_in ISO (PMID:31387992) RGD PMID:31387992 NCBI chr 1:172,695,275...172,761,906
Ensembl chr 1:172,696,120...172,761,960 		JBrowse link
G Tamalin trafficking regulator and scaffold protein tamalin involved_in ISO (PMID:32376687) RGD PMID:32376687 NCBI chr 7:132,338,900...132,359,519
Ensembl chr 7:132,338,900...132,346,666 		JBrowse link
G Tspan7 tetraspanin 7 involved_in IDA
IMP		 PMID:22445342 SynGO PMID:22445342 PMID:22445342 RGD:11068824, RGD:11068824 NCBI chr  X:12,208,783...12,306,092
Ensembl chr  X:12,208,783...12,306,131 		JBrowse link
G Usp46 ubiquitin specific peptidase 46 involved_in IMP
IEP
IDA		 PMID:26077708 SynGO PMID:26077708 PMID:26077708 PMID:26077708 RGD:11056935, RGD:11056935, RGD:11056935 NCBI chr14:34,150,055...34,219,227
Ensembl chr14:34,150,004...34,219,227 		JBrowse link
G Vac14 VAC14 component of PIKFYVE complex involved_in ISO (PMID:22842785) RGD PMID:22842785 NCBI chr19:38,590,569...38,691,911
Ensembl chr19:38,590,569...38,691,909 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    localization 5684
      establishment of localization 4991
        establishment of localization in cell 2144
          postsynaptic endocytosis 55
            postsynaptic neurotransmitter receptor internalization + 54
Path 2
Term Annotations click to browse term
  biological_process 20115
    localization 5684
      establishment of localization 4991
        transport 4685
          vesicle-mediated transport 1639
            vesicle-mediated transport in synapse 328
              postsynaptic endocytosis 55
                postsynaptic neurotransmitter receptor internalization + 54
paths to the root