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ONTOLOGY REPORT - ANNOTATIONS


Term:presynaptic endocytosis
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Accession:GO:0140238 term browser browse the term
Definition:A vesicle-mediated transport process in which the presynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.
Comment:Note that this term was created for the SynGO project, and will be obsoleted when the SynGO annotations are made in Noctua.



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presynaptic endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 involved_in ISO (MGI:7316615|PMID:33376223) RGD PMID:33376223 MGI:7316615 NCBI chr 4:119,300,128...119,451,834
Ensembl chr 4:119,295,257...119,450,969
JBrowse link
G Arfgap3 ADP-ribosylation factor GTPase activating protein 3 involved_in ISO (MGI:5561132|PMID:24719103) RGD PMID:24719103 MGI:5561132 NCBI chr 7:114,432,873...114,479,206
Ensembl chr 7:114,432,873...114,479,208
JBrowse link
clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btbd8 BTB domain containing 8 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6104538|PMID:29262337)
GO_REF:0000002
UniProt
RGD
InterPro
PMID:29262337 GO_REF:0000002 GO_REF:0000024 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Itsn1 intersectin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G Itsn2 intersectin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,616,645...27,727,373
Ensembl chr 6:27,600,406...27,727,124
JBrowse link
negative regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Syt11 synaptotagmin 11 involved_in IMP PMID:26589353 ParkinsonsUK-UCL PMID:26589353 RGD:11079192 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
positive regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca13 ATP binding cassette subfamily A member 13 involved_in ISO (MGI:6694370|PMID:33478937) RGD PMID:33478937 MGI:6694370 NCBI chr14:83,873,397...84,376,138
Ensembl chr14:83,873,940...84,375,075
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 IMP RGD PMID:19762466 RGD:13461856 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Bcl2l1 Bcl2-like 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:141,253,508...141,304,582
Ensembl chr 3:141,253,523...141,303,479
JBrowse link
G Dnm1 dynamin 1 IMP RGD PMID:17437541 RGD:8554440 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm1l dynamin 1-like involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 IMP RGD PMID:18445495 RGD:13462049 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mff mitochondrial fission factor involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 9:84,007,798...84,036,039
Ensembl chr 9:84,007,798...84,036,039
JBrowse link
G Nlgn1 neuroligin 1 involved_in IMP
ISO
PMID:19628693
(MGI:4355770|PMID:19628693)
RGD PMID:19628693 PMID:19628693 MGI:4355770, RGD:8554760 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:21808019 RGD:13506237 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma IMP RGD PMID:26627835 RGD:11532172 NCBI chr15:45,289,917...45,362,012
Ensembl chr15:45,290,373...45,361,832
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 IMP RGD PMID:14532001 RGD:13464359 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:21808019 RGD:13506237 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO
GO_REF:0000024
(PMID:21102408)
UniProt
RGD
PMID:21102408 GO_REF:0000024 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
regulation of synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc2a4 solute carrier family 2 member 4 involved_in IMP
IDA
PMID:28111082 SynGO PMID:28111082 PMID:28111082 RGD:13702195, RGD:13702195 NCBI chr10:54,666,015...54,671,581
Ensembl chr10:54,666,015...54,671,565
JBrowse link
regulation of synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO (MGI:6189485|PMID:27840001) RGD PMID:27840001 MGI:6189485 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Actg1 actin, gamma 1 involved_in ISO (MGI:6189485|PMID:27840001) RGD PMID:27840001 MGI:6189485 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Btbd9 BTB domain containing 9 acts_upstream_of_or_within ISO MGI:4127237 (MGI:5438074|PMID:22536397) RGD PMID:22536397 MGI:5438074 NCBI chr20:8,286,337...8,645,567
Ensembl chr20:8,288,711...8,643,960
JBrowse link
G Calm1 calmodulin 1 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
JBrowse link
G Calm2 calmodulin 2 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
JBrowse link
G Calm3 calmodulin 3 involved_in IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
JBrowse link
G Dgkq diacylglycerol kinase, theta involved_in ISO (MGI:5807028|PMID:26748701) RGD PMID:26748701 MGI:5807028 NCBI chr14:1,059,125...1,073,131
Ensembl chr14:1,059,170...1,073,131
JBrowse link
G Dnm1 dynamin 1 IMP RGD PMID:16648848 RGD:13504740 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (MGI:6189511|PMID:25501810) RGD PMID:25501810 MGI:6189511 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IMP RGD PMID:18842885 RGD:8554167 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma involved_in ISO (MGI:3054280|PMID:15386003) RGD PMID:15386003 MGI:3054280 NCBI chr 7:8,397,406...8,426,030
Ensembl chr 7:8,397,406...8,425,988
JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta involved_in ISO (MGI:4830393|PMID:20810903) RGD PMID:20810903 MGI:4830393 NCBI chr15:3,759,950...3,804,976
Ensembl chr15:3,760,030...3,804,981
JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma involved_in IMP
IDA
PMID:26627835 SynGO PMID:26627835 PMID:26627835 RGD:11532172, RGD:11532172 NCBI chr15:45,289,917...45,362,012
Ensembl chr15:45,290,373...45,361,832
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (MGI:6114813|PMID:29311685) RGD PMID:29311685 MGI:6114813 NCBI chr 1:48,688,651...49,882,520
Ensembl chr 1:48,690,556...49,882,555
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O60890 (PMID:27160703)
Ensembl
RGD
PMID:27160703 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Scamp5 secretory carrier membrane protein 5 involved_in IDA
IMP
PMID:25057210 SynGO PMID:25057210 PMID:25057210 RGD:13702419, RGD:13702419 NCBI chr 8:57,845,831...57,884,516
Ensembl chr 8:57,846,659...57,872,027
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 IMP RGD PMID:22750032 RGD:13463484 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Slc17a7 solute carrier family 17 member 7 IMP RGD PMID:16815333 RGD:13504741 NCBI chr 1:95,649,709...95,661,591
Ensembl chr 1:95,649,745...95,661,588
JBrowse link
G Snap91 synaptosome associated protein 91 IMP RGD PMID:18842885 RGD:8554167 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Syt11 synaptotagmin 11 involved_in ISO (MGI:6114813|PMID:29311685) RGD PMID:29311685 MGI:6114813 NCBI chr 2:174,206,032...174,232,540
Ensembl chr 2:174,206,191...174,231,964
JBrowse link
G Syt7 synaptotagmin 7 involved_in ISO (MGI:6189675|PMID:14532108) RGD PMID:14532108 MGI:6189675 NCBI chr 1:207,031,369...207,093,787
Ensembl chr 1:207,031,592...207,089,026
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 involved_in IDA
EXP
IMP
PMID:26607000 SynGO PMID:26607000 PMID:26607000 PMID:26607000 RGD:11058152, RGD:11058152, RGD:11058152 NCBI chr13:74,919,872...74,942,791
Ensembl chr13:74,919,880...74,933,686
JBrowse link
synaptic vesicle budding from presynaptic endocytic zone membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnm1 dynamin 1 involved_in ISO UniProtKB:Q8BZ98 (MGI:5285027|PMID:21689597) RGD PMID:21689597 MGI:5285027 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm3 dynamin 3 involved_in ISO UniProtKB:P39053 (MGI:5285027|PMID:21689597) RGD PMID:21689597 MGI:5285027 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in IC PMID:21832070 SynGO PMID:21832070 RGD:9685531 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IBA
ISO
PMID:21873635
(MGI:5707086|PMID:26412491)
RGD PMID:26412491 PMID:21873635 MGI:5707086, RGD:13792537 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
synaptic vesicle coating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cltb clathrin, light chain B involved_in NAS PMID:3563513 UniProt PMID:3563513 RGD:70686 NCBI chr17:10,001,512...10,019,201
Ensembl chr17:10,001,513...10,019,169
JBrowse link
synaptic vesicle endocytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in IEA
ISO
GO_REF:0000107
(MGI:6189485|PMID:27840001)
Ensembl
RGD
PMID:27840001 GO_REF:0000107 MGI:6189485 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877
JBrowse link
G Actg1 actin, gamma 1 involved_in ISO (MGI:6189485|PMID:27840001) RGD PMID:27840001 MGI:6189485 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Amph amphiphysin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2388118 (MGI:2176305|PMID:11879655)
RGD PMID:11879655 PMID:21873635 MGI:2176305, RGD:13792537 NCBI chr17:45,739,385...45,982,905
Ensembl chr17:45,739,395...45,983,315
JBrowse link
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in IDA
IMP
PMID:27534442 SynGO PMID:27534442 PMID:27534442 RGD:152025525, RGD:152025525 NCBI chr19:37,744,666...37,831,131
Ensembl chr19:37,744,633...37,829,167
JBrowse link
G Ap2b1 adaptor related protein complex 2 subunit beta 1 involved_in ISO (PMID:11102472) RGD PMID:11102472 NCBI chr10:68,099,397...68,205,023
Ensembl chr10:68,099,547...68,205,013
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 involved_in IMP
IDA
PMID:19321783 SynGO PMID:19321783 PMID:19321783 RGD:12050109, RGD:12050109 NCBI chr11:80,355,307...80,364,218
Ensembl chr11:80,328,041...80,364,140
JBrowse link
G Arf6 ADP-ribosylation factor 6 involved_in IDA
IMP
PMID:26731518 SynGO PMID:26731518 PMID:26731518 RGD:11556875, RGD:11556875 NCBI chr 6:87,853,742...87,854,890
Ensembl chr 6:87,840,142...87,874,114
JBrowse link
G Bin1 bridging integrator 1 involved_in IMP
ISO
IDA
PMID:9348539
(MGI:2176305|PMID:11879655)
RGD PMID:11879655 PMID:9348539 PMID:9348539 MGI:2176305, RGD:631926, RGD:631926 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
JBrowse link
G Bltp1 bridge-like lipid transfer protein family member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:119,708,114...119,924,697
Ensembl chr 2:119,708,209...119,924,695
JBrowse link
G Btbd8 BTB domain containing 8 involved_in ISO (MGI:6104538|PMID:29262337) RGD PMID:29262337 MGI:6104538 NCBI chr14:2,265,189...2,338,426
Ensembl chr14:2,266,454...2,334,393
JBrowse link
G Canx calnexin involved_in ISS
ISO
GO_REF:0000024
(MGI:5288282|PMID:21747946)
UniProt
RGD
PMID:21747946 GO_REF:0000024 MGI:5288282 NCBI chr10:34,623,865...34,656,866
Ensembl chr10:34,625,191...34,656,821
JBrowse link
G Cd24 CD24 molecule acts_upstream_of_or_within ISO MGI:2179996 (MGI:3625625|PMID:16606832) RGD PMID:16606832 MGI:3625625 NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
JBrowse link
G Cdk5 cyclin-dependent kinase 5 IMP RGD PMID:12855954 RGD:1358501 NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
JBrowse link
G Cltc clathrin heavy chain involved_in IMP
IDA
PMID:16982422 SynGO PMID:16982422 PMID:16982422 RGD:13702168, RGD:13702168 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Ctbp1 C-terminal binding protein 1 involved_in ISO (MGI:6415741|PMID:32075774) RGD PMID:32075774 MGI:6415741 NCBI chr14:77,455,580...77,482,821
Ensembl chr14:77,455,696...77,482,821
JBrowse link
G Dennd1a DENN domain containing 1A acts_upstream_of_or_within ISO (MGI:3694831|PMID:17182770) RGD PMID:17182770 MGI:3694831 NCBI chr 3:21,564,749...22,052,057
Ensembl chr 3:21,564,749...22,052,062
JBrowse link
G Diaph1 diaphanous-related formin 1 involved_in ISO (MGI:6114312|PMID:28231467) RGD PMID:28231467 MGI:6114312 NCBI chr18:29,669,659...29,769,044
Ensembl chr18:29,669,659...29,769,172
JBrowse link
G Dnm1 dynamin 1 involved_in ISO
IBA
(MGI:3709249|PMID:17463283)
(MGI:3709249|PMID:17463283), (MGI:5285027|PMID:21689597)
PMID:21873635
RGD PMID:17463283 PMID:21689597 PMID:21873635 MGI:3709249 MGI:5285027, RGD:13792537 NCBI chr 3:15,604,782...15,648,654
Ensembl chr 3:15,604,784...15,648,538
JBrowse link
G Dnm1l dynamin 1-like involved_in IDA
IMP
PMID:23792689 SynGO PMID:23792689 PMID:23792689 RGD:12793033, RGD:12793033 NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
JBrowse link
G Dnm2 dynamin 2 involved_in ISO
IBA
(MGI:5285027|PMID:21689597)
PMID:21873635
RGD PMID:21689597 PMID:21873635 MGI:5285027, RGD:13792537 NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
JBrowse link
G Dnm3 dynamin 3 involved_in ISO
IBA
(MGI:5285027|PMID:21689597)
PMID:21873635
RGD PMID:21689597 PMID:21873635 MGI:5285027, RGD:13792537 NCBI chr13:74,359,043...74,838,135
Ensembl chr13:74,359,213...74,838,108
JBrowse link
G Fcho2 FCH and mu domain containing endocytic adaptor 2 involved_in IGI
ISO
IBA
PMID:20448150
UniProtKB:D3ZIM5|UniProtKB:D3ZYR1 (MGI:5320276|PMID:20448150)
PMID:21873635
RGD PMID:20448150 PMID:20448150 PMID:21873635 MGI:5320276, RGD:12050101, RGD:13792537 NCBI chr 2:30,079,143...30,181,639
Ensembl chr 2:30,080,962...30,181,241
JBrowse link
G Grn granulin precursor IMP RGD PMID:21813674 RGD:5509044 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Itsn1 intersectin 1 involved_in ISO (MGI:3811659|PMID:18676989) RGD PMID:18676989 MGI:3811659 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645
JBrowse link
G LOC100910792 amphiphysin-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Nlgn1 neuroligin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
JBrowse link
G Nlgn2 neuroligin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,544,588...54,557,854
Ensembl chr10:54,544,588...54,558,434
JBrowse link
G Nlgn3 neuroligin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:66,427,926...66,457,378
Ensembl chr  X:66,429,458...66,451,876
JBrowse link
G Ophn1 oligophrenin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:700009 (MGI:4359148|PMID:19481455)
RGD PMID:19481455 PMID:21873635 MGI:4359148, RGD:13792537 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Pacsin1 protein kinase C and casein kinase substrate in neurons 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5304995|PMID:21926968)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21926968 GO_REF:0000024 GO_REF:0000107 MGI:5304995 NCBI chr20:5,718,134...5,768,064
Ensembl chr20:5,719,857...5,765,313
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IMP
IDA
PMID:21808019 SynGO PMID:21808019 PMID:21808019 RGD:13506237, RGD:13506237 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Rab27b RAB27B, member RAS oncogene family involved_in IMP
IDA
PMID:20926670 SynGO PMID:20926670 PMID:20926670 RGD:13432355, RGD:13432355 NCBI chr18:63,597,554...63,794,124
Ensembl chr18:63,600,937...63,757,180
JBrowse link
G Scrib scribble planar cell polarity protein involved_in ISO (MGI:4365512|PMID:19458197) RGD PMID:19458197 MGI:4365512 NCBI chr 7:107,759,343...107,782,364
Ensembl chr 7:107,759,343...107,782,331
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in
acts_upstream_of_or_within
IMP
ISO
IDA
PMID:22099461
MGI:2151070 (MGI:4359148|PMID:19481455)
RGD PMID:19481455 PMID:22099461 PMID:22099461 MGI:4359148, RGD:13702445, RGD:13702445 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Snap91 synaptosome associated protein 91 involved_in IDA
IMP
PMID:21808019 SynGO PMID:21808019 PMID:21808019 RGD:13506237, RGD:13506237 NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
JBrowse link
G Snca synuclein alpha involved_in IBA
ISO
PMID:21873635
(MGI:3850310|PMID:18980610)
(MGI:3850310|PMID:18980610), (MGI:5605098|PMID:25009269)
RGD PMID:18980610 PMID:25009269 PMID:21873635 MGI:3850310 MGI:5605098, RGD:13792537 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
G Sncb synuclein, beta involved_in IBA
ISO
PMID:21873635
(MGI:5605098|PMID:25009269)
RGD PMID:25009269 PMID:21873635 MGI:5605098, RGD:13792537 NCBI chr17:9,846,802...9,855,013
Ensembl chr17:9,846,802...9,855,012
JBrowse link
G Sncg synuclein, gamma involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:9,700,513...9,705,751
Ensembl chr16:9,700,514...9,705,368
JBrowse link
G Ston1 stonin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:5,843,186...5,892,557
Ensembl chr 6:5,843,185...5,892,449
JBrowse link
G Ston2 stonin 2 involved_in IMP
IBA
ISS
IDA
ISO
PMID:22727701
PMID:21873635
GO_REF:0000024
UniProtKB:O14656 (PMID:21102408)
UniProt
RGD
PMID:21102408 PMID:22727701 PMID:21873635 PMID:22727701 GO_REF:0000024, RGD:12050122, RGD:13792537, RGD:12050122 NCBI chr 6:110,567,485...110,676,376
Ensembl chr 6:110,567,485...110,676,376
JBrowse link
G Stx1a syntaxin 1A involved_in ISO (PMID:26635000) RGD PMID:26635000 NCBI chr12:21,641,971...21,670,022
Ensembl chr12:21,641,969...21,669,930
JBrowse link
G Synj1 synaptojanin 1 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000002
MGI:2179801 (MGI:3797309|PMID:18093523)
PMID:21873635
UniProtKB:Q8CHC4 (PMID:18093523)
ParkinsonsUK-UCL
InterPro
RGD
PMID:18093523 PMID:21873635 GO_REF:0000002 GO_REF:0000024 MGI:3797309, RGD:13792537 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link
G Synj2 synaptojanin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:46,518,594...46,621,919
Ensembl chr 1:46,518,709...46,633,687
JBrowse link
G Syp synaptophysin involved_in ISO (MGI:5141572|PMID:21658579) RGD PMID:21658579 MGI:5141572 NCBI chr  X:14,849,444...14,864,553
Ensembl chr  X:14,849,444...14,864,745
JBrowse link
G Syt1 synaptotagmin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:43,813,204...44,358,020
Ensembl chr 7:43,815,785...44,357,803
JBrowse link
G Syt2 synaptotagmin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,088,046...46,197,976
Ensembl chr13:46,185,282...46,193,859
JBrowse link
G Syt5 synaptotagmin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,277,351...69,285,071
Ensembl chr 1:69,277,351...69,285,067
JBrowse link
G Syt8 synaptotagmin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,588,126...197,593,598
Ensembl chr 1:197,590,149...197,593,504
JBrowse link
G Tbc1d24 TBC1 domain family, member 24 acts_upstream_of_or_within ISO MGI:5692831 (MGI:6279048|PMID:30335140) RGD PMID:30335140 MGI:6279048 NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050
JBrowse link
G Vamp2 vesicle-associated membrane protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3573806|PMID:15475946)
UniProt
RGD
PMID:15475946 GO_REF:0000024 MGI:3573806 NCBI chr10:53,793,581...53,797,815
Ensembl chr10:53,793,923...53,797,809
JBrowse link
synaptic vesicle uncoating term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 involved_in IBA
ISO
PMID:21873635
(MGI:4439191|PMID:20160091)
RGD PMID:20160091 PMID:21873635 MGI:4439191, RGD:13792537 NCBI chr 5:116,120,069...116,283,448
Ensembl chr 5:116,119,676...116,283,448
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in IC PMID:9878698 SynGO PMID:9878698 RGD:10059325 NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
JBrowse link
G Nostrin nitric oxide synthase trafficking involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:53,904,746...53,970,995
Ensembl chr 3:53,904,827...53,970,988
JBrowse link
G Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 involved_in ISO
IBA
UniProtKB:Q62420|UniProtKB:Q62421 (MGI:5300660|PMID:22099461)
PMID:21873635
RGD PMID:22099461 PMID:21873635 MGI:5300660, RGD:13792537 NCBI chr 9:842,285...869,753
Ensembl chr 9:842,288...869,716
JBrowse link
G Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 involved_in ISO
IBA
UniProtKB:Q62419|UniProtKB:Q62421 (MGI:5300660|PMID:22099461)
PMID:21873635
RGD PMID:22099461 PMID:21873635 MGI:5300660, RGD:13792537 NCBI chr 5:99,653,189...99,827,500
Ensembl chr 5:99,653,152...100,113,843
JBrowse link
G Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 involved_in ISO
IBA
UniProtKB:Q62419|UniProtKB:Q62420 (MGI:5300660|PMID:22099461)
PMID:21873635
RGD PMID:22099461 PMID:21873635 MGI:5300660, RGD:13792537 NCBI chr 1:136,124,502...136,255,669
Ensembl chr 1:136,124,499...136,255,584
JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within
involved_in
ISO MGI:2179801 (MGI:2447947|PMID:12481038)
(MGI:5300660|PMID:22099461)
(MGI:1346710|PMID:10535736), (MGI:5300660|PMID:22099461)
RGD PMID:10535736 PMID:12481038 PMID:22099461 MGI:1346710 MGI:2447947 MGI:5300660 NCBI chr11:30,192,629...30,269,277
Ensembl chr11:30,192,629...30,269,220
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20099
    cellular process 18695
      cellular localization 3595
        establishment of localization in cell 2294
          presynaptic endocytosis 81
            synaptic vesicle endocytosis + 79
Path 2
Term Annotations click to browse term
  biological_process 20099
    localization 5650
      establishment of localization 4976
        transport 4813
          vesicle-mediated transport 1656
            endocytosis 646
              presynaptic endocytosis 81
                synaptic vesicle endocytosis + 79
paths to the root