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ONTOLOGY REPORT - ANNOTATIONS

Term:catalytic activity, acting on a rRNA
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Accession:GO:0140102 term browser browse the term
Definition:Catalytic activity that acts to modify a ribosomal RNA.


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18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor enables ISO (PMID:25851604) RGD PMID:25851604 NCBI chr 2:38,343,086...38,368,242
Ensembl chr 2:38,354,854...38,368,227 		JBrowse link
18S rRNA aminocarboxypropyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tsr3 TSR3 ribosome maturation factor enables ISO (PMID:27084949) RGD PMID:27084949 NCBI chr10:14,257,161...14,259,562
Ensembl chr10:14,257,171...14,259,561 		JBrowse link
rRNA (adenine-N6,N6-)-dimethyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor enables ISO
IBA		 (PMID:25851604)
GO_REF:0000033		 RGD
GO_Central		 PMID:25851604 GO_REF:0000033 NCBI chr 2:38,343,086...38,368,242
Ensembl chr 2:38,354,854...38,368,227 		JBrowse link
G Tfb1m transcription factor B1, mitochondrial enables IEA
ISO
IBA
ISS		 GO_REF:0000104
(MGI:3843703|PMID:19356719)
(PMID:12496758), (PMID:23303773), (PMID:31251801)
GO_REF:0000033
GO_REF:0000024		 UniProt
RGD
GO_Central		 PMID:12496758 PMID:19356719 PMID:23303773 PMID:31251801 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 MGI:3843703 NCBI chr 1:44,115,240...44,161,737
Ensembl chr 1:44,119,166...44,161,709 		JBrowse link
G Tfb2m transcription factor B2, mitochondrial enables IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr13:91,278,889...91,296,709
Ensembl chr13:91,278,898...91,296,657 		JBrowse link
rRNA (adenine-N6-)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl5 methyltransferase 5, N6-adenosine enables ISO
IBA		 (MGI:6505165|PMID:32783360)
GO_REF:0000033
(PMID:31328227), (PMID:32217665), (PMID:33357433), (PMID:33428944), (PMID:35033535)		 RGD
GO_Central		 PMID:31328227 PMID:32217665 PMID:32783360 PMID:33357433 PMID:33428944 More... GO_REF:0000033 MGI:6505165 NCBI chr 3:54,625,790...54,638,066
Ensembl chr 3:54,625,793...54,638,039 		JBrowse link
G Zcchc4 zinc finger CCHC-type containing 4 enables ISO
IBA
IEA
ISS		 (PMID:30531910), (PMID:31328227), (PMID:31695039), (PMID:31799605)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
GO_REF:0000002		 RGD
GO_Central
Ensembl
UniProt
InterPro		 PMID:30531910 PMID:31328227 PMID:31695039 PMID:31799605 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr14:58,165,467...58,207,071
Ensembl chr14:58,165,460...58,206,743 		JBrowse link
rRNA (cytosine-C5-)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nop2 NOP2 nucleolar protein enables IBA
ISO		 GO_REF:0000033
(PMID:26196125), (PMID:36161484)		 GO_Central
RGD		 PMID:26196125 PMID:36161484 GO_REF:0000033 NCBI chr 4:157,932,731...157,944,462
Ensembl chr 4:157,932,716...157,944,459 		JBrowse link
G Nsun4 NOP2/Sun RNA methyltransferase 4 enables ISO (PMID:21531335), (PMID:23022348) RGD PMID:21531335 PMID:23022348 NCBI chr 5:129,511,224...129,532,498
Ensembl chr 5:129,512,307...129,532,423
Ensembl chr 5:129,512,307...129,532,423 		JBrowse link
G Nsun5 NOP2/Sun RNA methyltransferase 5 enables ISO (PMID:31428936), (PMID:31722427)
(MGI:6414744|PMID:31722427)		 RGD PMID:31428936 PMID:31722427 MGI:6414744 NCBI chr12:21,293,637...21,299,319
Ensembl chr12:21,293,645...21,299,272 		JBrowse link
rRNA (cytosine-N4-)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl15 methyltransferase 15, mitochondrial 12S rRNA N4-cytidine enables ISO
IBA		 (PMID:31665743), (PMID:32371392)
GO_REF:0000033		 RGD
GO_Central		 PMID:31665743 PMID:32371392 GO_REF:0000033 NCBI chr 3:95,586,855...95,764,392
Ensembl chr 3:95,586,850...95,764,397 		JBrowse link
rRNA (guanine) methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud23 BUD23, rRNA methyltransferase and ribosome maturation factor enables ISO
IBA		 (PMID:25851604)
GO_REF:0000033		 RGD
GO_Central		 PMID:25851604 GO_REF:0000033 NCBI chr12:21,629,551...21,640,758
Ensembl chr12:21,629,536...21,640,751 		JBrowse link
G Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:91,180,945...91,187,389
Ensembl chr10:91,180,696...91,187,397 		JBrowse link
G Mrm1 mitochondrial rRNA methyltransferase 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:69,690,406...69,697,326
Ensembl chr10:69,690,421...69,696,709 		JBrowse link
rRNA (guanosine-2'-O-)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mrm1 mitochondrial rRNA methyltransferase 1 enables ISO (PMID:25074936), (PMID:35177605) RGD PMID:25074936 PMID:35177605 NCBI chr10:69,690,406...69,697,326
Ensembl chr10:69,690,421...69,696,709 		JBrowse link
G Mrm3 mitochondrial rRNA methyltransferase 3 enables ISO (PMID:24036117), (PMID:25074936), (PMID:35177605) RGD PMID:24036117 PMID:25074936 PMID:35177605 NCBI chr10:61,095,920...61,125,421
Ensembl chr10:61,095,952...61,102,630 		JBrowse link
rRNA (pseudouridine) methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Emg1 EMG1 N1-specific pseudouridine methyltransferase enables ISO
IBA		 (PMID:20047967)
GO_REF:0000033		 RGD
GO_Central		 PMID:20047967 GO_REF:0000033 NCBI chr 4:157,509,258...157,517,540
Ensembl chr 4:157,509,277...157,517,540 		JBrowse link
rRNA (uridine-2'-O-)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:91,180,945...91,187,389
Ensembl chr10:91,180,696...91,187,397 		JBrowse link
G Mrm2 mitochondrial rRNA methyltransferase 2 enables ISO
IBA		 (PMID:25074936), (PMID:35177605)
GO_REF:0000033		 RGD
GO_Central		 PMID:25074936 PMID:35177605 GO_REF:0000033 NCBI chr12:14,309,556...14,314,759
Ensembl chr12:14,251,941...14,314,118 		JBrowse link
rRNA (uridine-C5-)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trmt2b tRNA methyltransferase 2 homolog B enables ISO (PMID:31948311), (PMID:34556860)
(MGI:6714531|PMID:31736397)		 RGD PMID:31736397 PMID:31948311 PMID:34556860 MGI:6714531 NCBI chr  X:97,425,712...97,483,821 JBrowse link
rRNA (uridine-N3-)-methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdxacb1 ferredoxin-fold anticodon binding domain containing 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:51,111,831...51,118,253
Ensembl chr 8:51,113,397...51,118,308 		JBrowse link
rRNA methyltransferase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbl fibrillarin enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,469,832...83,478,932
Ensembl chr 1:83,469,832...83,478,932 		JBrowse link
G Fbll1 fibrillarin-like 1 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:20,258,656...20,260,299
Ensembl chr10:20,258,656...20,260,299 		JBrowse link
G Nsun4 NOP2/Sun RNA methyltransferase 4 enables ISO (PMID:23022348) RGD PMID:23022348 NCBI chr 5:129,511,224...129,532,498
Ensembl chr 5:129,512,307...129,532,423
Ensembl chr 5:129,512,307...129,532,423 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 20732
    catalytic activity 6110
      catalytic activity, acting on a nucleic acid 634
        catalytic activity, acting on RNA 398
          catalytic activity, acting on a rRNA 20
            18S rRNA aminocarboxypropyltransferase activity 1
            rRNA N-glycosylase activity 0
            rRNA methyltransferase activity + 19
paths to the root