catalytic activity, acting on RNA - Ontology Report

GO_Central
UniProt
Ensembl
RHEA

GO_REF:0000117

NCBI chr17:59,307,104...59,320,317
Ensembl chr17:59,306,613...59,320,367

18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dimt1

DIM1 rRNA methyltransferase and ribosome maturation factor

enables

ISO
IEA
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr13:107,083,637...107,097,833
Ensembl chr13:107,083,635...107,096,732

3'-5' DNA/RNA helicase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dhx9

DExH-box helicase 9

enables

ISO
IEA
ISS

GO_REF:0000002 GO_REF:0000024 GO_REF:0000119

NCBI chr 1:153,331,506...153,363,464
Ensembl chr 1:153,331,504...153,363,406

3'-5' RNA helicase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Aqr

aquarius

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 2:113,931,642...114,005,788
Ensembl chr 2:113,931,651...114,017,505

Dhx38

DEAH-box helicase 38

enables

IBA

GO_REF:0000033

NCBI chr 8:110,274,631...110,292,493
Ensembl chr 8:110,274,643...110,292,493

Dhx40

DEAH-box helicase 40

enables

IBA

GO_REF:0000033

NCBI chr11:86,659,675...86,698,695
Ensembl chr11:86,659,672...86,698,572

Dhx9

DExH-box helicase 9

enables

ISO
ISS

GO_REF:0000024 GO_REF:0000119

NCBI chr 1:153,331,506...153,363,464
Ensembl chr 1:153,331,504...153,363,406

Skic2

SKI2 subunit of superkiller complex

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr17:35,058,202...35,069,180
Ensembl chr17:35,058,204...35,069,186

Supv3l1

suppressor of var1, 3-like 1 (S. cerevisiae)

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr10:62,265,000...62,287,294
Ensembl chr10:62,264,988...62,285,517

Ythdc2

YTH domain containing 2

enables

ISO
IEA
IDA

(PMID:29360036)

PMID:29360036

GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr18:44,961,521...45,022,782
Ensembl chr18:44,960,813...45,022,791

3'-5'-RNA exonuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cnot6

CCR4-NOT transcription complex, subunit 6

enables

IBA

GO_REF:0000033

NCBI chr11:49,562,324...49,604,227
Ensembl chr11:49,562,330...49,603,550

Cnot6l

CCR4-NOT transcription complex, subunit 6-like

enables

IBA

GO_REF:0000033

NCBI chr 5:96,218,192...96,312,044
Ensembl chr 5:96,218,192...96,312,030

Cnot7

CCR4-NOT transcription complex, subunit 7

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:40,945,579...40,968,888
Ensembl chr 8:40,945,581...40,968,888

Cnot8

CCR4-NOT transcription complex, subunit 8

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr11:57,983,620...58,009,423
Ensembl chr11:57,994,979...58,009,420

Dis3

DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease

enables

ISO
IEA
IBA
ISS

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr14:99,314,070...99,337,217
Ensembl chr14:99,312,642...99,337,206

Dis3l

DIS3 like exosome 3'-5' exoribonuclease

enables

ISO
IEA
IBA
ISS

Reactome
Ensembl
UniProt
InterPro
GO_Central

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr 9:64,214,038...64,248,707
Ensembl chr 9:64,214,038...64,248,570

Dis3l2

DIS3 like 3'-5' exoribonuclease 2

enables

TAS
IEA
IBA
ISO
IDA

(PMID:23594738), (PMID:25119025)

PMID:23594738 PMID:25119025

GO_REF:0000002 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119 Reactome:R-MMU-9822432

NCBI chr 1:86,629,646...86,977,819
Ensembl chr 1:86,631,530...86,977,817

Eri1

exoribonuclease 1

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 8:35,932,419...35,962,687
Ensembl chr 8:35,932,407...35,963,350

Eri2

exoribonuclease 2

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 7:119,383,049...119,393,283
Ensembl chr 7:119,367,902...119,393,281

Eri3

exoribonuclease 3

enables

IEA

GO_REF:0000002

NCBI chr 4:117,407,416...117,531,494
Ensembl chr 4:117,407,562...117,531,494

Exd2

exonuclease 3'-5' domain containing 2

enables

ISO
IEA
ISS

GO_Central
InterPro
Ensembl

GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr12:80,509,869...80,544,909
Ensembl chr12:80,509,869...80,547,001

Exosc10

exosome component 10

enables

ISO
IBA
IEA

GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 4:148,642,870...148,666,854
Ensembl chr 4:148,642,886...148,666,858

Isg20

interferon-stimulated protein

enables

ISO

GO_REF:0000119

NCBI chr 7:78,561,136...78,570,144
Ensembl chr 7:78,563,172...78,570,144

Isg20l2

interferon stimulated exonuclease gene 20-like 2

enables

IEA

GO_REF:0000002

NCBI chr 3:87,837,602...87,847,994
Ensembl chr 3:87,837,621...87,847,993

Myg1

melanocyte proliferating gene 1

enables

IEA
ISO

GO_REF:0000107 GO_REF:0000119

NCBI chr15:102,240,144...102,246,574
Ensembl chr15:102,240,144...102,246,574

Noct

nocturnin

enables

IBA

GO_REF:0000033

NCBI chr 3:51,131,868...51,159,075
Ensembl chr 3:51,131,868...51,159,065

Pan2

PAN2 poly(A) specific ribonuclease subunit

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr10:128,135,106...128,157,227
Ensembl chr10:128,139,204...128,157,227

Parn

poly(A)-specific ribonuclease (deadenylation nuclease)

enables

IBA

GO_REF:0000033

NCBI chr16:13,355,828...13,486,035
Ensembl chr16:13,355,824...13,486,034

Pde12

phosphodiesterase 12

enables

ISO
IBA
IEA

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr14:26,381,113...26,390,823
Ensembl chr14:26,381,113...26,391,038

Pnldc1

poly(A)-specific ribonuclease (PARN)-like domain containing 1

enables

IBA

GO_REF:0000033

NCBI chr17:13,107,610...13,129,489
Ensembl chr17:13,107,616...13,129,117

Pnpt1

polyribonucleotide nucleotidyltransferase 1

enables

ISO
IEA
IBA
ISS

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr11:29,080,236...29,112,010
Ensembl chr11:29,080,744...29,111,828

Polrmt

polymerase (RNA) mitochondrial (DNA directed)

enables

IEA
ISO

GO_Central
InterPro
Ensembl

GO_REF:0000107 GO_REF:0000119

NCBI chr10:79,571,951...79,582,436
Ensembl chr10:79,571,957...79,582,415

Rexo2

RNA exonuclease 2

enables

ISO
IEA
IBA

GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 9:48,379,812...48,391,911
Ensembl chr 9:48,379,812...48,391,923

Toe1

target of EGR1, member 1 (nuclear)

enables

ISO
IEA
IBA

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 4:116,661,199...116,664,785
Ensembl chr 4:116,651,507...116,664,837

Usb1

U6 snRNA biogenesis 1

enables

ISO
IEA
IBA
ISS

GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000119

NCBI chr 8:96,058,006...96,074,137
Ensembl chr 8:96,058,912...96,074,135

Xrn2

5'-3' exoribonuclease 2

enables

ISO

GO_REF:0000119

NCBI chr 2:146,854,672...146,919,922
Ensembl chr 2:146,854,916...146,919,920

3'-tRNA processing endoribonuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Elac1

elaC ribonuclease Z 1

enables

IBA
IEA

GO_REF:0000003 GO_REF:0000033

NCBI chr18:73,868,109...73,887,589
Ensembl chr18:73,868,109...73,887,550

Elac2

elaC ribonuclease Z 2

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr11:64,869,856...64,892,906
Ensembl chr11:64,869,864...64,892,895

5'-3' DNA/RNA helicase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pif1

PIF1 5'-to-3' DNA helicase

enables

ISO

GO_REF:0000119

NCBI chr 9:65,494,432...65,503,249
Ensembl chr 9:65,494,442...65,503,249

5'-3' RNA exonuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cpsf3

cleavage and polyadenylation specificity factor 3

enables

IBA
IDA

(PMID:18955505)

PMID:18955505

GO_REF:0000033

NCBI chr12:21,336,298...21,365,057
Ensembl chr12:21,335,392...21,365,057

Dcp2

decapping mRNA 2

enables

ISO
IEA

UniProt
GO_Central
BHF-UCL

GO_REF:0000107 GO_REF:0000119

NCBI chr18:44,513,567...44,558,036
Ensembl chr18:44,513,569...44,558,036

Xrn1

5'-3' exoribonuclease 1

enables

TAS
IBA
IEA
IDA
ISO

(PMID:9218715)
(PMID:9049243)

PMID:9049243 PMID:9218715

GO_REF:0000033 GO_REF:0000117 GO_REF:0000119

NCBI chr 9:95,836,803...95,939,859
Ensembl chr 9:95,836,813...95,939,856

Xrn2

5'-3' exoribonuclease 2

enables

NAS
IEA
IBA

(PMID:7885830)

PMID:7885830

GO_REF:0000002 GO_REF:0000033

NCBI chr 2:146,854,672...146,919,922
Ensembl chr 2:146,854,916...146,919,920

5'-3' RNA helicase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ighmbp2

immunoglobulin mu DNA binding protein 2

enables

ISO
ISS

GO_REF:0000024 GO_REF:0000119

NCBI chr19:3,309,076...3,333,011
Ensembl chr19:3,309,076...3,333,017

Mov10

Mov10 RISC complex RNA helicase

enables

ISS
IEA
ISO

GO_REF:0000002 GO_REF:0000024 GO_REF:0000119

NCBI chr 3:104,702,144...104,725,935
Ensembl chr 3:104,702,152...104,725,879

5'-3' RNA polymerase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Polr1a

polymerase (RNA) I polypeptide A

enables

IEA

GO_REF:0000116

NCBI chr 6:71,886,037...71,956,419
Ensembl chr 6:71,886,037...71,961,919

Polr1b

polymerase (RNA) I polypeptide B

enables

IEA

GO_REF:0000116

NCBI chr 2:128,942,891...128,969,980
Ensembl chr 2:128,942,915...128,968,514

Polr2a

polymerase (RNA) II (DNA directed) polypeptide A

enables

IEA

GO_REF:0000116

NCBI chr11:69,624,823...69,649,459
Ensembl chr11:69,624,823...69,649,463

Polr2b

polymerase (RNA) II (DNA directed) polypeptide B

enables

IEA

GO_REF:0000116

NCBI chr 5:77,458,331...77,497,175
Ensembl chr 5:77,457,994...77,497,171

Polr3b

polymerase (RNA) III (DNA directed) polypeptide B

enables

IEA

GO_REF:0000116

NCBI chr10:84,458,156...84,563,042
Ensembl chr10:84,458,156...84,563,042

Polrmt

polymerase (RNA) mitochondrial (DNA directed)

enables

IEA

GO_REF:0000116

NCBI chr10:79,571,951...79,582,436
Ensembl chr10:79,571,957...79,582,415

Ala-tRNA(Thr) deacylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

D-tyrosyl-tRNA deacylase 2

enables

IDA
IEA
ISO

(PMID:29410408)

PMID:29410408

GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr12:52,035,089...52,053,290
Ensembl chr12:52,035,095...52,053,284

alanine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

PMID:2040280 PMID:27622773

alanyl-tRNA synthetase 1

enables

ISO
IEA
IBA
IDA

(PMID:27622773)

RGD
Ensembl
RHEA
UniProt
InterPro
GO_Central

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000096 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119 RGD:2302982

NCBI chr 8:111,759,781...111,784,237
Ensembl chr 8:111,759,776...111,784,296

Aars2

alanyl-tRNA synthetase 2, mitochondrial

enables

IEA
IBA
ISO

RHEA
GO_Central
InterPro
Ensembl
UniProt

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr17:45,817,473...45,831,769
Ensembl chr17:45,817,767...45,831,769

alanyl-tRNA synthetase domain containing 1

enables

IEA

GO_REF:0000002

NCBI chr11:101,297,489...101,308,422
Ensembl chr11:101,297,665...101,308,441

aminoacyl-tRNA deacylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

alanyl-tRNA synthetase 1

enables

ISO
IEA
IBA
IDA

(PMID:20010690)

PMID:20010690

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:111,759,781...111,784,237
Ensembl chr 8:111,759,776...111,784,296

Aars2

alanyl-tRNA synthetase 2, mitochondrial

enables

IBA

GO_REF:0000033

NCBI chr17:45,817,473...45,831,769
Ensembl chr17:45,817,767...45,831,769

alanyl-tRNA synthetase domain containing 1

enables

IDA
IEA

(PMID:18172502)

PMID:18172502

GO_REF:0000117

NCBI chr11:101,297,489...101,308,422
Ensembl chr11:101,297,665...101,308,441

D-tyrosyl-tRNA deacylase 1

enables

IEA

GO_REF:0000002

NCBI chr 2:144,441,873...144,610,667
Ensembl chr 2:144,441,817...144,610,678

D-tyrosyl-tRNA deacylase 2

enables

IEA

GO_REF:0000002

NCBI chr12:52,035,089...52,053,290
Ensembl chr12:52,035,095...52,053,284

Iars1

isoleucyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002

NCBI chr13:49,835,606...49,887,743
Ensembl chr13:49,835,576...49,887,743

Iars2

isoleucine-tRNA synthetase 2, mitochondrial

enables

IEA

GO_REF:0000002

NCBI chr 1:185,018,839...185,061,615
Ensembl chr 1:185,016,923...185,061,593

UniProt
Ensembl
InterPro
GO_Central

leucyl-tRNA synthetase 1

enables

ISS
IEA
ISO

GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr18:42,335,363...42,395,302
Ensembl chr18:42,335,363...42,395,259

Lars2

leucyl-tRNA synthetase, mitochondrial

enables

IEA

GO_REF:0000002

NCBI chr 9:123,196,001...123,291,731
Ensembl chr 9:123,195,992...123,291,731

Prorsd1

prolyl-tRNA synthetase domain containing 1

enables

IEA

GO_REF:0000002

NCBI chr11:29,461,757...29,465,033
Ensembl chr11:29,461,757...29,465,033

Tars2

threonyl-tRNA synthetase 2, mitochondrial (putative)

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 3:95,647,286...95,663,677
Ensembl chr 3:95,647,288...95,667,518

Vars1

valyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002

NCBI chr17:35,219,895...35,235,304
Ensembl chr17:35,219,963...35,235,298

Vars2

valyl-tRNA synthetase 2, mitochondrial

enables

IEA

GO_REF:0000002

NCBI chr17:35,966,526...35,978,531
Ensembl chr17:35,966,526...35,978,484

aminoacyl-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

alanyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 8:111,759,781...111,784,237
Ensembl chr 8:111,759,776...111,784,296

Aars2

alanyl-tRNA synthetase 2, mitochondrial

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr17:45,817,473...45,831,769
Ensembl chr17:45,817,767...45,831,769

alanyl-tRNA synthetase domain containing 1

enables

IEA

GO_REF:0000002

NCBI chr11:101,297,489...101,308,422
Ensembl chr11:101,297,665...101,308,441

Cars1

cysteinyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 7:143,110,967...143,153,827
Ensembl chr 7:143,110,967...143,153,827

Cars2

cysteinyl-tRNA synthetase 2, mitochondrial

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 8:11,564,017...11,600,781
Ensembl chr 8:11,563,977...11,600,783

Dalrd3

DALR anticodon binding domain containing 3

enables

IEA

GO_REF:0000002

NCBI chr 9:108,444,710...108,449,972
Ensembl chr 9:108,447,085...108,449,973

Dars1

aspartyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 1:128,291,444...128,345,153
Ensembl chr 1:128,291,444...128,345,105

Dars2

aspartyl-tRNA synthetase 2 (mitochondrial)

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 1:160,868,171...160,898,236
Ensembl chr 1:160,868,171...160,898,228

Ears2

glutamyl-tRNA synthetase 2, mitochondrial

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 7:121,633,385...121,666,436
Ensembl chr 7:121,636,436...121,666,486

Eprs1

glutamyl-prolyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 1:185,093,614...185,160,557
Ensembl chr 1:185,095,241...185,160,557

Fars2

phenylalanine-tRNA synthetase 2, mitochondrial

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr13:36,301,373...36,721,569
Ensembl chr13:36,301,395...36,910,254

Farsa

phenylalanyl-tRNA synthetase, alpha subunit

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 8:85,583,597...85,595,886
Ensembl chr 8:85,583,618...85,595,886

Farsb

phenylalanyl-tRNA synthetase, beta subunit

enables

IEA

GO_REF:0000043

NCBI chr 1:78,394,593...78,465,530
Ensembl chr 1:78,394,612...78,465,534

Gars1

glycyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 6:55,014,986...55,056,489
Ensembl chr 6:55,014,992...55,056,485

Hars1

histidyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr18:36,899,581...36,916,258
Ensembl chr18:36,899,581...36,916,258

Hars2

histidyl-tRNA synthetase 2

enables

IEA

GO_REF:0000043

NCBI chr18:36,916,257...36,925,615
Ensembl chr18:36,916,061...36,925,615

Iars1

isoleucyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr13:49,835,606...49,887,743
Ensembl chr13:49,835,576...49,887,743

Iars2

isoleucine-tRNA synthetase 2, mitochondrial

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 1:185,018,839...185,061,615
Ensembl chr 1:185,016,923...185,061,593

Kars1

lysyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 8:112,720,071...112,737,986
Ensembl chr 8:112,720,075...112,737,955

leucyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr18:42,335,363...42,395,302
Ensembl chr18:42,335,363...42,395,259

Lars2

leucyl-tRNA synthetase, mitochondrial

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 9:123,196,001...123,291,731
Ensembl chr 9:123,195,992...123,291,731

Mars1

methionine-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr10:127,132,090...127,147,655
Ensembl chr10:127,132,090...127,147,655

Mars2

methionine-tRNA synthetase 2 (mitochondrial)

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 1:55,276,336...55,279,217
Ensembl chr 1:55,276,336...55,287,629

Nars1

asparaginyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr18:64,632,726...64,649,586
Ensembl chr18:64,632,718...64,649,723

Nars2

asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 7:96,600,698...96,725,606
Ensembl chr 7:96,600,712...96,713,965

Pars2

prolyl-tRNA synthetase (mitochondrial)(putative)

enables

IEA

GO_REF:0000002 GO_REF:0000043 GO_REF:0000117

NCBI chr 4:106,508,266...106,512,479
Ensembl chr 4:106,508,266...106,512,479

Qars1

glutaminyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 9:108,385,204...108,393,140
Ensembl chr 9:108,384,905...108,393,140

Rars1

arginyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr11:35,699,207...35,725,355
Ensembl chr11:35,699,208...35,725,333

Rars2

arginyl-tRNA synthetase 2, mitochondrial

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 4:34,614,941...34,660,167
Ensembl chr 4:34,614,957...34,660,167

Sars1

seryl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 3:108,332,180...108,352,575
Ensembl chr 3:108,332,181...108,352,525

Sars2

seryl-aminoacyl-tRNA synthetase 2

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 7:28,441,393...28,453,304
Ensembl chr 7:28,441,417...28,453,296

Tars1

threonyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr15:11,383,749...11,399,744
Ensembl chr15:11,382,387...11,399,751

Tars2

threonyl-tRNA synthetase 2, mitochondrial (putative)

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 3:95,647,286...95,663,677
Ensembl chr 3:95,647,288...95,667,518

Tars3

threonyl-tRNA synthetase 3

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 7:65,294,610...65,341,841
Ensembl chr 7:65,294,646...65,341,839

Vars1

valyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr17:35,219,895...35,235,304
Ensembl chr17:35,219,963...35,235,298

Vars2

valyl-tRNA synthetase 2, mitochondrial

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr17:35,966,526...35,978,531
Ensembl chr17:35,966,526...35,978,484

Wars1

tryptophanyl-tRNA synthetase1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr12:108,825,956...108,860,095
Ensembl chr12:108,825,956...108,860,100

Wars2

tryptophanyl tRNA synthetase 2 (mitochondrial)

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 3:99,047,423...99,128,546
Ensembl chr 3:99,048,384...99,146,502

Yars1

tyrosyl-tRNA synthetase 1

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr 4:129,083,595...129,113,033
Ensembl chr 4:129,083,553...129,113,400

Yars2

tyrosyl-tRNA synthetase 2 (mitochondrial)

enables

IEA

GO_REF:0000002 GO_REF:0000043

NCBI chr16:16,120,829...16,127,504
Ensembl chr16:16,120,829...16,127,504

arginine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dalrd3

DALR anticodon binding domain containing 3

enables

IEA

PMID:7082655 PMID:12060739

GO_REF:0000002

NCBI chr 9:108,444,710...108,449,972
Ensembl chr 9:108,447,085...108,449,973

Rars1

arginyl-tRNA synthetase 1

enables

ISO
IEA
IBA
ISS
IMP

(PMID:12060739)

RGD
UniProt
Ensembl
RHEA
InterPro
GO_Central
CAFA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119 RGD:2303394

NCBI chr11:35,699,207...35,725,355
Ensembl chr11:35,699,208...35,725,333

Rars2

arginyl-tRNA synthetase 2, mitochondrial

enables

ISO
IEA
IBA
ISS

GO_Central
Ensembl
UniProt
RHEA
InterPro

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 4:34,614,941...34,660,167
Ensembl chr 4:34,614,957...34,660,167

arginyl-tRNA--protein transferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ate1

arginyltransferase 1

enables

IDA
IEA
IBA
ISO

(PMID:16002466), (PMID:25369936)

UniProt
RHEA
InterPro
GO_Central

PMID:16002466 PMID:25369936

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000116 GO_REF:0000119

NCBI chr 7:129,993,219...130,122,349
Ensembl chr 7:129,993,223...130,122,099

asparagine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Nars1

asparaginyl-tRNA synthetase 1

enables

ISO
IEA
IBA
ISS

GO_Central
InterPro
RHEA
UniProt
Ensembl

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr18:64,632,726...64,649,586
Ensembl chr18:64,632,718...64,649,723

Nars2

asparaginyl-tRNA synthetase 2 (mitochondrial)(putative)

enables

ISS
IEA
IBA

UniProt
InterPro
GO_Central
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000116

NCBI chr 7:96,600,698...96,725,606
Ensembl chr 7:96,600,712...96,713,965

aspartate-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dars1

aspartyl-tRNA synthetase 1

enables

ISO
IEA
IBA

MGI
InterPro
UniProt
GO_Central
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000008 GO_REF:0000033 GO_REF:0000116

NCBI chr 1:128,291,444...128,345,153
Ensembl chr 1:128,291,444...128,345,105

Dars2

aspartyl-tRNA synthetase 2 (mitochondrial)

enables

ISS
IEA
IBA
ISO

UniProt
RHEA
GO_Central
Ensembl

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 1:160,868,171...160,898,236
Ensembl chr 1:160,868,171...160,898,228

aspartate-tRNA(Asn) ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dars2

aspartyl-tRNA synthetase 2 (mitochondrial)

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 1:160,868,171...160,898,236
Ensembl chr 1:160,868,171...160,898,228

catalytic activity, acting on a tRNA

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ankzf1

ankyrin repeat and zinc finger domain containing 1

enables

ISO
ISS

GO_REF:0000024 GO_REF:0000119

NCBI chr 1:75,168,794...75,176,031
Ensembl chr 1:75,168,795...75,176,031

CCA tRNA nucleotidyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trnt1

tRNA nucleotidyl transferase, CCA-adding, 1

enables

ISO
IEA
ISS

(PMID:11504732)

MGI
Ensembl
UniProt
RHEA
GO_Central

PMID:11504732

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 6:106,746,099...106,759,435
Ensembl chr 6:106,746,081...106,759,435

CCACCA tRNA nucleotidyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trnt1

tRNA nucleotidyl transferase, CCA-adding, 1

enables

ISO
IEA
ISS

GO_Central
Ensembl
UniProt
RHEA
InterPro

GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 6:106,746,099...106,759,435
Ensembl chr 6:106,746,081...106,759,435

cysteine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cars1

cysteinyl-tRNA synthetase 1

enables

ISO
IBA
IEA
ISS

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 7:143,110,967...143,153,827
Ensembl chr 7:143,110,967...143,153,827

Cars2

cysteinyl-tRNA synthetase 2, mitochondrial

enables

ISO
IBA
IEA

GO_Central
InterPro
RHEA
UniProt

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000116 GO_REF:0000119

NCBI chr 8:11,564,017...11,600,781
Ensembl chr 8:11,563,977...11,600,783

D-aminoacyl-tRNA deacylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

D-tyrosyl-tRNA deacylase 1

enables

IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000116

NCBI chr 2:144,441,873...144,610,667
Ensembl chr 2:144,441,817...144,610,678

D-tyrosyl-tRNA deacylase 2

enables

IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000116

NCBI chr12:52,035,089...52,053,290
Ensembl chr12:52,035,095...52,053,284

D-tyrosyl-tRNA(Tyr) deacylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

D-tyrosyl-tRNA deacylase 1

enables

IBA

GO_REF:0000033

NCBI chr 2:144,441,873...144,610,667
Ensembl chr 2:144,441,817...144,610,678

D-tyrosyl-tRNA deacylase 2

enables

IDA
IEA
IBA

(PMID:29410408)

UniProt
RHEA
GO_Central

PMID:29410408

GO_REF:0000033 GO_REF:0000116

NCBI chr12:52,035,089...52,053,290
Ensembl chr12:52,035,095...52,053,284

DNA-directed RNA polymerase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Crcp

calcitonin gene-related peptide-receptor component protein

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:130,058,147...130,089,628
Ensembl chr 5:130,058,131...130,089,630

Polr1a

polymerase (RNA) I polypeptide A

contributes_to
enables

ISO
IEA
IBA
ISS

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 GO_REF:0000119

NCBI chr 6:71,886,037...71,956,419
Ensembl chr 6:71,886,037...71,961,919

Polr1b

polymerase (RNA) I polypeptide B

contributes_to
enables

ISO
IBA
IEA
ISS

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 GO_REF:0000119

NCBI chr 2:128,942,891...128,969,980
Ensembl chr 2:128,942,915...128,968,514

Polr1c

polymerase (RNA) I polypeptide C

contributes_to
enables

IBA
IEA

GO_REF:0000002 GO_REF:0000033

NCBI chr17:46,554,846...46,558,971
Ensembl chr17:46,554,846...46,558,980

Polr1d

polymerase (RNA) I polypeptide D

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 5:147,013,525...147,048,171
Ensembl chr 5:147,013,860...147,048,407

Polr1h

RNA polymerase I subunit H

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr17:37,265,250...37,269,417
Ensembl chr17:37,265,248...37,269,451

Polr2a

polymerase (RNA) II (DNA directed) polypeptide A

enables
contributes_to

ISO
IEA
IBA
ISS

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119

NCBI chr11:69,624,823...69,649,459
Ensembl chr11:69,624,823...69,649,463

Polr2b

polymerase (RNA) II (DNA directed) polypeptide B

enables
contributes_to

ISO
IEA
IBA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:77,458,331...77,497,175
Ensembl chr 5:77,457,994...77,497,171

Polr2c

polymerase (RNA) II (DNA directed) polypeptide C

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 8:95,584,078...95,590,870
Ensembl chr 8:95,584,078...95,600,163

Polr2e

polymerase (RNA) II (DNA directed) polypeptide E

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr10:79,871,787...79,875,493
Ensembl chr10:79,871,783...79,875,629

Polr2f

polymerase (RNA) II (DNA directed) polypeptide F

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr15:79,025,525...79,035,974
Ensembl chr15:79,025,209...79,035,974

Polr2h

polymerase (RNA) II (DNA directed) polypeptide H

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr16:20,536,552...20,541,015
Ensembl chr16:20,536,415...20,541,017

Polr2i

polymerase (RNA) II (DNA directed) polypeptide I

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 7:29,931,499...29,932,812
Ensembl chr 7:29,931,373...29,932,815

Polr2j

polymerase (RNA) II (DNA directed) polypeptide J

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 5:136,145,545...136,151,801
Ensembl chr 5:136,145,485...136,151,801

Polr2k

polymerase (RNA) II (DNA directed) polypeptide K

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr15:36,174,156...36,177,158
Ensembl chr15:36,174,156...36,177,156

Polr2l

polymerase (RNA) II (DNA directed) polypeptide L

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 7:141,051,773...141,055,066
Ensembl chr 7:141,051,773...141,055,045

Polr3a

polymerase (RNA) III (DNA directed) polypeptide A

enables
contributes_to

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:24,498,762...24,537,126
Ensembl chr14:24,498,764...24,537,126

Polr3b

polymerase (RNA) III (DNA directed) polypeptide B

enables
contributes_to

ISO
IBA
IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr10:84,458,156...84,563,042
Ensembl chr10:84,458,156...84,563,042

Polr3h

polymerase (RNA) III (DNA directed) polypeptide H

enables

ISS
IEA
ISO

GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr15:81,799,231...81,813,824
Ensembl chr15:81,772,429...81,810,441

Polr3k

polymerase (RNA) III (DNA directed) polypeptide K

enables
contributes_to

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 2:181,506,153...181,512,623
Ensembl chr 2:181,506,130...181,512,623

Polrmt

polymerase (RNA) mitochondrial (DNA directed)

enables

ISO
IEA
IBA
ISS

UniProt
Ensembl
GO_Central
InterPro

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr10:79,571,951...79,582,436
Ensembl chr10:79,571,957...79,582,415

Prim1

DNA primase, p49 subunit

enables

IDA
IEA
IBA
ISO

(PMID:8026492)

PMID:8026492

GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr10:127,851,084...127,865,899
Ensembl chr10:127,851,041...127,865,906

Prim2

DNA primase, p58 subunit

contributes_to

ISO
ISS
IEA

UniProt
InterPro
GO_Central
Ensembl

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 1:33,492,889...33,708,867
Ensembl chr 1:33,492,891...33,708,876

Primpol

primase and polymerase (DNA-directed)

enables

IDA
IEA
IBA
ISO

(PMID:29073063)

PMID:29073063

GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:47,028,614...47,070,282
Ensembl chr 8:47,028,629...47,070,247

DNA/RNA helicase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ddx1

DEAD box helicase 1

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr12:13,269,308...13,299,175
Ensembl chr12:13,266,974...13,299,214

G3bp1

G3BP stress granule assembly factor 1

enables

IBA
IEA
ISO

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr11:55,360,521...55,391,722
Ensembl chr11:55,360,511...55,395,664

endoribonuclease activity, cleaving miRNA-paired mRNA

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

argonaute RISC catalytic subunit 2

enables

IEA
ISO

GO_REF:0000107 GO_REF:0000119

NCBI chr15:72,967,693...73,056,777
Ensembl chr15:72,967,693...73,056,784

Ago3

argonaute RISC catalytic subunit 3

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 4:126,220,797...126,323,360
Ensembl chr 4:126,225,497...126,323,349

endoribonuclease activity, cleaving siRNA-paired mRNA

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Reactome
InterPro
Ensembl
GO_Central
UniProt

argonaute RISC catalytic subunit 2

enables

TAS
IEA
ISO
ISS

GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119 Reactome:R-MMU-9820863

NCBI chr15:72,967,693...73,056,777
Ensembl chr15:72,967,693...73,056,784

exoribonuclease II activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dis3l

DIS3 like exosome 3'-5' exoribonuclease

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 9:64,214,038...64,248,707
Ensembl chr 9:64,214,038...64,248,570

Helz2

helicase with zinc finger 2, transcriptional coactivator

enables

ISO
ISS

GO_REF:0000024 GO_REF:0000119

NCBI chr 2:180,869,408...180,883,851
Ensembl chr 2:180,869,408...180,883,820

Isg20

interferon-stimulated protein

enables

IEA

UniProt
InterPro
Ensembl
GO_Central
RHEA

GO_REF:0000003

NCBI chr 7:78,561,136...78,570,144
Ensembl chr 7:78,563,172...78,570,144

glutamate-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ears2

glutamyl-tRNA synthetase 2, mitochondrial

enables

IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 7:121,633,385...121,666,436
Ensembl chr 7:121,636,436...121,666,486

Eprs1

glutamyl-prolyl-tRNA synthetase 1

enables

ISO
IEA
ISS

GO_Central
Ensembl
UniProt
InterPro
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 1:185,093,614...185,160,557
Ensembl chr 1:185,095,241...185,160,557

glutamate-tRNA(Gln) ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ears2

glutamyl-tRNA synthetase 2, mitochondrial

enables

IEA
ISO

RHEA
Ensembl
GO_Central

GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 7:121,633,385...121,666,436
Ensembl chr 7:121,636,436...121,666,486

glutamine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

leucyl-tRNA synthetase 1

enables

ISO
IEA

GO_Central
Ensembl
UniProt
RHEA

GO_REF:0000107 GO_REF:0000119

NCBI chr18:42,335,363...42,395,302
Ensembl chr18:42,335,363...42,395,259

Qars1

glutaminyl-tRNA synthetase 1

enables

ISO
IEA
IBA
ISS

MGI
InterPro
Ensembl
UniProt
GO_Central
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000008 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 9:108,385,204...108,393,140
Ensembl chr 9:108,384,905...108,393,140

glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gatb

glutamyl-tRNA amidotransferase subunit B

contributes_to
enables

ISO
IBA
IEA

GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 3:85,481,409...85,562,945
Ensembl chr 3:85,481,426...85,562,929

Gatc

glutamyl-tRNA amidotransferase subunit C

enables

IEA

RHEA
InterPro
GO_Central
UniProt
Ensembl

GO_REF:0000104 GO_REF:0000116

NCBI chr 5:115,471,301...115,479,220
Ensembl chr 5:115,471,298...115,479,237

Qrsl1

glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1

enables
contributes_to

IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr10:43,750,184...43,777,742
Ensembl chr10:43,750,184...43,777,741

Gly-tRNA(Ala) deacylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

D-tyrosyl-tRNA deacylase 1

enables

IEA

GO_REF:0000116

NCBI chr 2:144,441,873...144,610,667
Ensembl chr 2:144,441,817...144,610,678

D-tyrosyl-tRNA deacylase 2

enables

IEA

UniProt
Ensembl
GO_Central
RHEA
InterPro

GO_REF:0000116

NCBI chr12:52,035,089...52,053,290
Ensembl chr12:52,035,095...52,053,284

glycine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gars1

glycyl-tRNA synthetase 1

enables

IMP
IEA
IBA
ISO
ISS

(PMID:19470612)

MGI
InterPro
Ensembl
RHEA
UniProt
GO_Central

PMID:19470612

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr 6:55,014,986...55,056,489
Ensembl chr 6:55,014,992...55,056,485

histidine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Hars1

histidyl-tRNA synthetase 1

enables

ISS
IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr18:36,899,581...36,916,258
Ensembl chr18:36,899,581...36,916,258

Hars2

histidyl-tRNA synthetase 2

enables

IEA
IBA
ISO

UniProt
InterPro
GO_Central
Ensembl
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr18:36,916,257...36,925,615
Ensembl chr18:36,916,061...36,925,615

internal mRNA (guanine-N7-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl1

methyltransferase 1, tRNA methylguanosine

enables

ISO
IEA

GO_Central
Ensembl
RHEA

GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr10:126,877,287...126,882,234
Ensembl chr10:126,877,283...126,882,234

isoleucine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Iars1

isoleucyl-tRNA synthetase 1

enables

ISS
IEA
IBA
IMP
ISO

(PMID:12060739)

UniProt
Ensembl
RHEA
GO_Central
InterPro
CAFA
MGI

GO_Central
InterPro
UniProt
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000008 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr13:49,835,606...49,887,743
Ensembl chr13:49,835,576...49,887,743

Iars2

isoleucine-tRNA synthetase 2, mitochondrial

enables

IBA
IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000116

NCBI chr 1:185,018,839...185,061,615
Ensembl chr 1:185,016,923...185,061,593

L-seryl-tRNA(Sec) kinase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pstk

phosphoseryl-tRNA kinase

enables

IDA
IEA

(PMID:15317934)

MGI
RHEA
UniProt

PMID:15317934

GO_REF:0000003 GO_REF:0000116

NCBI chr 7:130,972,843...130,994,497
Ensembl chr 7:130,972,870...130,996,211

leucine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

leucyl-tRNA synthetase 1

enables

ISS
IBA
IEA
IMP
ISO

(PMID:12060739)

UniProt
GO_Central
InterPro
Ensembl
RHEA
CAFA

RHEA
GO_Central
InterPro
Ensembl
UniProt

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr18:42,335,363...42,395,302
Ensembl chr18:42,335,363...42,395,259

Lars2

leucyl-tRNA synthetase, mitochondrial

enables

IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 9:123,196,001...123,291,731
Ensembl chr 9:123,195,992...123,291,731

lysine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Kars1

lysyl-tRNA synthetase 1

enables

ISO
IEA
IBA
ISS

RGD
InterPro
UniProt
GO_Central
RHEA

PMID:7082655 PMID:7372681

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 GO_REF:0000116 GO_REF:0000119 RGD:2303393 RGD:2303394

NCBI chr 8:112,720,071...112,737,986
Ensembl chr 8:112,720,075...112,737,955

methionine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mars1

methionine-tRNA synthetase 1

enables

ISO
IBA
IEA
ISS
IMP

(PMID:12060739)

MGI
GO_Central
UniProt
RHEA
InterPro
CAFA

RHEA
Ensembl
InterPro
GO_Central
UniProt

GO_REF:0000002 GO_REF:0000003 GO_REF:0000008 GO_REF:0000024 GO_REF:0000033 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr10:127,132,090...127,147,655
Ensembl chr10:127,132,090...127,147,655

Mars2

methionine-tRNA synthetase 2 (mitochondrial)

enables

IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 1:55,276,336...55,279,217
Ensembl chr 1:55,276,336...55,287,629

methionyl-tRNA formyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mtfmt

mitochondrial methionyl-tRNA formyltransferase

enables

ISO
IEA
IBA
ISS

GO_Central
UniProt
InterPro
RHEA
Ensembl

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr 9:65,343,064...65,360,336
Ensembl chr 9:65,343,064...65,360,336

methyltransferase cap1 activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cmtr1

cap methyltransferase 1

enables

ISO
IEA
IBA
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr17:29,879,569...29,924,953
Ensembl chr17:29,879,569...29,924,953

Cmtr2

cap methyltransferase 2

enables

IEA
IBA

GO_REF:0000033 GO_REF:0000107 GO_REF:0000117

NCBI chr 8:110,941,977...110,951,121
Ensembl chr 8:110,942,297...110,951,118

methyltransferase cap2 activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cmtr2

cap methyltransferase 2

enables

ISS
ISO

UniProt
Ensembl
RHEA
InterPro
GO_Central

GO_REF:0000024 GO_REF:0000119

NCBI chr 8:110,941,977...110,951,121
Ensembl chr 8:110,942,297...110,951,118

mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pcif1

phosphorylated CTD interacting factor 1

enables

IMP
IEA
ISO
ISS

(PMID:30487554)

PMID:30487554

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr 2:164,721,288...164,733,360
Ensembl chr 2:164,721,224...164,736,374

mRNA (adenine-N1-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt61a

tRNA methyltransferase 61A

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr12:111,644,539...111,650,336
Ensembl chr12:111,644,539...111,650,336

mRNA (cytidine-5-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Nsun2

NOL1/NOP2/Sun domain family member 2

enables

ISO
IEA
IDA

(PMID:23871666)

PMID:23871666

GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr13:69,760,135...69,783,899
Ensembl chr13:69,681,865...69,783,899

NOL1/NOP2/Sun domain family, member 4

enables

ISS
IEA
ISO

UniProt
RHEA
GO_Central

GO_REF:0000024 GO_REF:0000116 GO_REF:0000119

NCBI chr 4:115,890,202...115,911,076
Ensembl chr 4:115,890,039...115,911,073

mRNA 5'-cap (guanine-N7-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rnmt

RNA (guanine-7-) methyltransferase

enables

ISO
IBA
IEA
ISS

MGI
GO_Central
UniProt
Ensembl
InterPro

GO_REF:0000002 GO_REF:0000003 GO_REF:0000008 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr18:68,433,406...68,457,923
Ensembl chr18:68,433,426...68,457,923

mRNA 5'-diphosphatase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dxo

decapping exoribonuclease

enables

IDA
IBA

(PMID:23523372)

UniProt
InterPro
GO_Central
Ensembl

PMID:23523372

GO_REF:0000033

NCBI chr17:35,055,998...35,058,162
Ensembl chr17:35,055,995...35,058,209

mRNA 5'-triphosphate monophosphatase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rngtt

RNA guanylyltransferase and 5'-phosphatase

enables

IEA

RHEA
InterPro

GO_REF:0000002 GO_REF:0000116

NCBI chr 4:33,310,300...33,502,610
Ensembl chr 4:33,310,311...33,502,614

mRNA guanylyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rngtt

RNA guanylyltransferase and 5'-phosphatase

enables

ISS
IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 4:33,310,300...33,502,610
Ensembl chr 4:33,310,311...33,502,614

mRNA m(6)A methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl14

methyltransferase 14, N6-adenosine-methyltransferase subunit

NOT|enables

ISO
IEA
IMP
IDA

(PMID:27627798)
(PMID:31340148)
(PMID:24394384)

UniProt
Ensembl
UniProt
GO_Central

PMID:24394384 PMID:27627798 PMID:31340148

GO_REF:0000107 GO_REF:0000119

NCBI chr 3:123,161,944...123,179,639
Ensembl chr 3:123,161,946...123,179,757

Mettl16

methyltransferase 16, N6-methyladenosine

enables

IDA
IEA
ISO

(PMID:29262316)

UniProt
Ensembl
RHEA
GO_Central

PMID:29262316

GO_REF:0000003 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr11:74,661,658...74,716,649
Ensembl chr11:74,661,656...74,719,351

Mettl3

methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit

enables

ISO
IEA
IBA
IMP
ISS
IDA

(PMID:9409616)
(PMID:24209618), (PMID:25456834), (PMID:25569111), (PMID:28792938)
(PMID:24394384), (PMID:33020597)

MGI
UniProt
GO_Central
RHEA
InterPro

PMID:9409616 PMID:24209618 PMID:24394384 PMID:25456834 PMID:25569111 More...

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr14:52,532,298...52,548,555
Ensembl chr14:52,532,298...52,542,585

Tmt1a

thiol methyltransferase 1A1

enables

ISO

GO_REF:0000119

NCBI chr15:100,201,969...100,227,882
Ensembl chr15:100,202,021...100,226,543

Tmt1a2

thiol methyltransferase 1A2

enables

ISO

GO_REF:0000119

NCBI chr15:100,251,081...100,259,700
Ensembl chr15:100,251,081...100,259,721

Tmt1a3

thiol methyltransferase 1A3

enables

ISO

PMID:28655767 PMID:34774131

GO_REF:0000119

NCBI chr15:100,232,687...100,246,267
Ensembl chr15:100,232,810...100,238,256

mRNA methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl8

methyltransferase 8, methylcytidine

NOT|enables

ISO
IMP

(PMID:34774131)
(PMID:28655767)

UniProt
GO_Central
MGI

GO_REF:0000119

NCBI chr 2:70,794,902...70,886,729
Ensembl chr 2:70,794,905...70,885,927

mRNA N1-methyladenosine dioxygenase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Alkbh3

alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase

enables

ISS
IEA
ISO

UniProt
RHEA
GO_Central

GO_REF:0000003 GO_REF:0000024 GO_REF:0000116 GO_REF:0000119

NCBI chr 2:93,810,979...93,841,099
Ensembl chr 2:93,810,895...93,841,152

mRNA N6-methyladenosine dioxygenase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Alkbh5

alkB homolog 5, RNA demethylase

enables

ISO
IMP
ISS
IEA

(PMID:29279410), (PMID:35939687), (PMID:36859428)

GO_Central
UniProt
Ensembl
RHEA

PMID:29279410 PMID:35939687 PMID:36859428

GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr11:60,428,509...60,449,338
Ensembl chr11:60,427,207...60,449,338

Fto

FTO alpha-ketoglutarate dependent dioxygenase

enables

IBA
IEA
ISS
ISO

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 8:92,039,995...92,395,061
Ensembl chr 8:92,040,153...92,395,067

O-phosphoseryl-tRNA(Sec) selenium transferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Sepsecs

Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase

enables

IEA

RHEA
InterPro
UniProt

GO_REF:0000002 GO_REF:0000003 GO_REF:0000116

NCBI chr 5:52,797,431...52,827,104
Ensembl chr 5:52,797,429...52,827,050

oxidative RNA demethylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Alkbh1

alkB homolog 1, histone H2A dioxygenase

enables

ISO
IBA
IEA
ISS

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr12:87,474,847...87,490,609
Ensembl chr12:87,472,610...87,490,787

Alkbh3

alkB homolog 3, alpha-ketoglutarate-dependent dioxygenase

enables

IDA
IEA
ISO

(PMID:16174769)

PMID:16174769

GO_REF:0000117 GO_REF:0000119

NCBI chr 2:93,810,979...93,841,099
Ensembl chr 2:93,810,895...93,841,152

Alkbh5

alkB homolog 5, RNA demethylase

enables

IEA
IBA

BHF-UCL
InterPro
Ensembl
GO_Central

GO_REF:0000002 GO_REF:0000033

NCBI chr11:60,428,509...60,449,338
Ensembl chr11:60,427,207...60,449,338

Fto

FTO alpha-ketoglutarate dependent dioxygenase

enables

IDA
IEA
ISO

(PMID:18775698)

PMID:18775698

GO_REF:0000002 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:92,039,995...92,395,061
Ensembl chr 8:92,040,153...92,395,067

Jmjd6

jumonji domain containing 6

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr11:116,728,258...116,734,593
Ensembl chr11:116,728,258...116,734,275

peptidyl-tRNA hydrolase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Etf1

eukaryotic translation termination factor 1

enables

ISO
IEA

UniProt
Ensembl
RHEA
GO_Central

GO_REF:0000107 GO_REF:0000119

NCBI chr18:35,035,838...35,065,060
Ensembl chr18:35,035,838...35,065,060

Mrpl58

mitochondrial ribosomal protein L58

enables

ISS
IEA
IBA
ISO

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr11:115,294,550...115,303,500
Ensembl chr11:115,294,578...115,303,500

Ptrh1

peptidyl-tRNA hydrolase 1 homolog

enables

ISO
IEA
IBA
ISS

GO_Central
Ensembl
RHEA
InterPro
UniProt

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 2:32,665,760...32,667,609
Ensembl chr 2:32,665,798...32,667,609

Ptrh2

peptidyl-tRNA hydrolase 2

enables

IEA
IBA
ISO

UniProt
InterPro
Ensembl
GO_Central
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr11:86,574,900...86,583,283
Ensembl chr11:86,574,811...86,583,283

Ptrhd1

peptidyl-tRNA hydrolase domain containing 1

enables

IEA

RHEA
InterPro
UniProt

GO_REF:0000002 GO_REF:0000003 GO_REF:0000116

NCBI chr12:4,284,013...4,290,123
Ensembl chr12:4,284,027...4,289,950

peptidyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ggt1

gamma-glutamyltransferase 1

enables

ISO

GO_REF:0000119

NCBI chr10:75,396,910...75,422,027
Ensembl chr10:75,397,438...75,422,034

Ggt5

gamma-glutamyltransferase 5

enables

ISO
IEA

UniProt
RHEA
GO_Central
Ensembl
InterPro

GO_REF:0000107 GO_REF:0000119

NCBI chr10:75,425,161...75,453,034
Ensembl chr10:75,425,174...75,453,034

phenylalanine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Fars2

phenylalanine-tRNA synthetase 2, mitochondrial

enables

ISS
IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr13:36,301,373...36,721,569
Ensembl chr13:36,301,395...36,910,254

Farsa

phenylalanyl-tRNA synthetase, alpha subunit

enables

ISO
IBA
IEA
ISS

GO_Central
RHEA
UniProt
Ensembl
InterPro

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 8:85,583,597...85,595,886
Ensembl chr 8:85,583,618...85,595,886

Farsb

phenylalanyl-tRNA synthetase, beta subunit

contributes_to
enables

IBA
IEA
ISO
ISS

GO_Central
Ensembl
InterPro
UniProt
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr 1:78,394,593...78,465,530
Ensembl chr 1:78,394,612...78,465,534

Lrrc47

leucine rich repeat containing 47

contributes_to
enables

IBA
IEA

GO_REF:0000002 GO_REF:0000033

NCBI chr 4:154,096,260...154,105,969
Ensembl chr 4:154,096,188...154,105,970

phosphodiesterase decapping endonuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Nudt12

nudix hydrolase 12

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr17:59,307,104...59,320,317
Ensembl chr17:59,306,613...59,320,367

Nudt16

nudix hydrolase 16

enables

IBA
ISO

GO_REF:0000033 GO_REF:0000119

NCBI chr 9:105,006,531...105,010,332
Ensembl chr 9:105,006,102...105,009,023

Nudt16l1

nudix hydrolase 16 like 1

NOT|enables

IBA

GO_REF:0000033

NCBI chr16:4,756,975...4,758,892
Ensembl chr16:4,756,625...4,758,896

Nudt16l2

nudix hydrolase 16 like 2

enables

IBA

GO_REF:0000033

NCBI chr 9:105,020,543...105,022,281
Ensembl chr 9:105,020,541...105,022,291

poly(A)-specific ribonuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cnot1

CCR4-NOT transcription complex, subunit 1

contributes_to

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 8:96,445,559...96,534,741
Ensembl chr 8:96,446,079...96,534,092

Cnot2

CCR4-NOT transcription complex, subunit 2

contributes_to

ISS
IEA
ISO

Reactome
Ensembl
InterPro
UniProt
GO_Central

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr10:116,321,065...116,418,891
Ensembl chr10:116,321,066...116,417,416

Cnot6

CCR4-NOT transcription complex, subunit 6

enables

TAS
IEA
ISS
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119 Reactome:R-MMU-9822325

NCBI chr11:49,562,324...49,604,227
Ensembl chr11:49,562,330...49,603,550

Cnot6l

CCR4-NOT transcription complex, subunit 6-like

enables

TAS
IEA
IMP

(PMID:17452450)

Reactome
UniProt
InterPro
MGI

PMID:17452450

GO_REF:0000002 GO_REF:0000003 Reactome:R-MMU-9822325 Reactome:R-MMU-9822332

NCBI chr 5:96,218,192...96,312,044
Ensembl chr 5:96,218,192...96,312,030

Cnot7

CCR4-NOT transcription complex, subunit 7

enables

IMP
IBA
IEA
ISO

(PMID:18625844)

MGI
GO_Central
InterPro
UniProt
Ensembl

PMID:18625844

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:40,945,579...40,968,888
Ensembl chr 8:40,945,581...40,968,888

Cnot8

CCR4-NOT transcription complex, subunit 8

enables

ISS
IEA
IBA
ISO

UniProt
Ensembl
InterPro
GO_Central

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr11:57,983,620...58,009,423
Ensembl chr11:57,994,979...58,009,420

Noct

nocturnin

enables

IDA
IEA
IMP

(PMID:17400819)
(PMID:22073225)

PMID:17400819 PMID:22073225

GO_REF:0000002

NCBI chr 3:51,131,868...51,159,075
Ensembl chr 3:51,131,868...51,159,065

Pan2

PAN2 poly(A) specific ribonuclease subunit

contributes_to
enables

IBA
IEA
ISO
ISS

GO_Central
UniProt
InterPro
Ensembl

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000119

NCBI chr10:128,135,106...128,157,227
Ensembl chr10:128,139,204...128,157,227

Pan3

PAN3 poly(A) specific ribonuclease subunit

contributes_to

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 5:147,363,018...147,485,310
Ensembl chr 5:147,366,971...147,485,312

Parn

poly(A)-specific ribonuclease (deadenylation nuclease)

enables

ISS
IEA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000119

NCBI chr16:13,355,828...13,486,035
Ensembl chr16:13,355,824...13,486,034

Pde12

phosphodiesterase 12

enables

IEA
ISO

GO_REF:0000003 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr14:26,381,113...26,390,823
Ensembl chr14:26,381,113...26,391,038

Pnldc1

poly(A)-specific ribonuclease (PARN)-like domain containing 1

enables

ISO
IEA
IDA

(PMID:27515512)

PMID:27515512

GO_REF:0000003 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr17:13,107,610...13,129,489
Ensembl chr17:13,107,616...13,129,117

Toe1

target of EGR1, member 1 (nuclear)

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 4:116,661,199...116,664,785
Ensembl chr 4:116,651,507...116,664,837

poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Usb1

U6 snRNA biogenesis 1

enables

ISO
ISS
IEA

GO_REF:0000024 GO_REF:0000104 GO_REF:0000119

NCBI chr 8:96,058,006...96,074,137
Ensembl chr 8:96,058,912...96,074,135

proline-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Eprs1

glutamyl-prolyl-tRNA synthetase 1

enables

ISS
IEA
IBA
ISO
IMP

(PMID:12060739)

UniProt
Ensembl
RHEA
InterPro
GO_Central
CAFA

GO_Central
InterPro
RHEA
UniProt

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr 1:185,093,614...185,160,557
Ensembl chr 1:185,095,241...185,160,557

Pars2

prolyl-tRNA synthetase (mitochondrial)(putative)

enables

IBA
IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000116

NCBI chr 4:106,508,266...106,512,479
Ensembl chr 4:106,508,266...106,512,479

ribonuclease A activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ear4

eosinophil-associated, ribonuclease A family, member 4

enables

IEA

GO_REF:0000003

Rnase1

ribonuclease, RNase A family, 1 (pancreatic)

enables

IEA

GO_REF:0000003

NCBI chr14:51,382,459...51,384,224
Ensembl chr14:51,382,455...51,384,242

Rnase2b

ribonuclease, RNase A family, 2B (liver, eosinophil-derived neurotoxin)

enables

IEA

Reactome
UniProt
GO_Central
InterPro

GO_REF:0000003

NCBI chr14:51,399,717...51,400,475
Ensembl chr14:51,399,717...51,400,475

ribonuclease III activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dicer1

dicer 1, ribonuclease type III

enables

TAS
IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000117 GO_REF:0000119 Reactome:R-MMU-9709033 Reactome:R-MMU-9820882

NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211

Drosha

drosha, ribonuclease type III

enables

IEA
IBA
ISO

UniProt
GO_Central
Ensembl
InterPro

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr15:12,824,893...12,935,377
Ensembl chr15:12,824,901...12,935,377

Mrpl44

mitochondrial ribosomal protein L44

enables

IEA

GO_REF:0000002

NCBI chr 1:79,753,735...79,759,162
Ensembl chr 1:79,753,735...79,759,162

ribonuclease MRP activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pop5

processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)

enables

ISA

(PMID:11413139)

MGI

PMID:11413139

NCBI chr 5:115,373,505...115,379,031
Ensembl chr 5:115,373,895...115,383,410

Rpp40

ribonuclease P 40 subunit

contributes_to

IBA

GO_REF:0000033

NCBI chr13:36,080,685...36,095,548
Ensembl chr13:36,077,455...36,090,342

ribonuclease P activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pop1

processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)

contributes_to

ISO

GO_REF:0000119

NCBI chr15:34,495,457...34,530,799
Ensembl chr15:34,495,450...34,530,794

Pop4

processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae)

contributes_to
enables

ISO
IEA
ISS

MGI
Ensembl
UniProt
GO_Central

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 7:37,962,239...37,970,803
Ensembl chr 7:37,961,420...37,970,847

Pop5

processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)

enables
contributes_to

IDA
IEA
ISO

(PMID:11413139)

PMID:11413139

GO_REF:0000003 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:115,373,505...115,379,031
Ensembl chr 5:115,373,895...115,383,410

Pop7

processing of precursor 7, ribonuclease P family, (S. cerevisiae)

contributes_to
enables

ISO
IEA
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:137,499,701...137,500,682
Ensembl chr 5:137,499,700...137,500,780

Prorp

protein only RNase P catalytic subunit

enables

ISO
IEA
IBA
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr12:55,349,422...55,429,276
Ensembl chr12:55,346,362...55,429,318

Rpp14

ribonuclease P 14 subunit

contributes_to
enables

ISS
IEA
ISO

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr14:14,377,927...14,389,460
Ensembl chr14:14,377,939...14,389,406

Rpp21

ribonuclease P 21 subunit

enables
contributes_to

IEA
ISO

GO_REF:0000003 GO_REF:0000107 GO_REF:0000119

NCBI chr17:36,566,565...36,568,738
Ensembl chr17:36,566,537...36,568,961

Rpp25

ribonuclease P/MRP 25 subunit

contributes_to
enables

ISS
IEA
ISO

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 9:57,411,385...57,412,730
Ensembl chr 9:57,411,309...57,412,731

Rpp30

ribonuclease P/MRP 30 subunit

contributes_to
enables

ISO
IEA

GO_REF:0000003 GO_REF:0000107 GO_REF:0000119

NCBI chr19:36,061,118...36,082,173
Ensembl chr19:36,061,116...36,082,177

Rpp38

ribonuclease P/MRP 38 subunit

contributes_to
enables

IBA
IEA
ISO

MGI
UniProt
Ensembl
GO_Central

GO_REF:0000003 GO_REF:0000033 GO_REF:0000119

NCBI chr 2:3,328,305...3,334,023
Ensembl chr 2:3,329,986...3,333,680

Rpp40

ribonuclease P 40 subunit

enables
contributes_to

ISO
IEA
ISS
IBA

(PMID:9630247)

PMID:9630247

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr13:36,080,685...36,095,548
Ensembl chr13:36,077,455...36,090,342

ribonuclease T2 activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rnaset2a

ribonuclease T2A

enables

IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000116

NCBI chr17:8,347,412...8,367,078
Ensembl chr17:8,334,277...8,366,929

Rnaset2b

ribonuclease T2B

enables

IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000116

NCBI chr17:7,246,259...7,265,592
Ensembl chr17:7,238,033...7,278,698

RNA 2'-O-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Fbll1

fibrillarin-like 1

enables

ISO
IEA
IDA

(PMID:39570315)

PMID:39570315

GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr11:35,688,207...35,689,711
Ensembl chr11:35,688,209...35,689,711

FtsJ RNA 2'-O-methyltransferase 3

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr11:106,139,964...106,146,910
Ensembl chr11:106,139,968...106,146,905

RNA 5'-gamma-phosphate methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mepce

methylphosphate capping enzyme

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:137,780,168...137,785,915
Ensembl chr 5:137,780,168...137,785,917

RNA cap trimethylguanosine synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tgs1

trimethylguanosine synthase 1

enables

ISO
IEA
IBA

GO_Central
Ensembl
RHEA

GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 4:3,574,875...3,616,624
Ensembl chr 4:3,574,875...3,616,619

RNA endonuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ago1

argonaute RISC catalytic subunit 1

NOT|enables

ISO

(PMID:23809764)

PMID:23809764

NCBI chr 4:126,328,805...126,362,500
Ensembl chr 4:126,328,805...126,362,376

argonaute RISC catalytic subunit 2

enables

IDA
IBA
IEA
ISO

(PMID:20424607)

MGI
GO_Central
Ensembl

PMID:20424607

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr15:72,967,693...73,056,777
Ensembl chr15:72,967,693...73,056,784

Ago3

argonaute RISC catalytic subunit 3

enables

ISO
IEA
IBA
ISS

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 4:126,220,797...126,323,360
Ensembl chr 4:126,225,497...126,323,349

Ago4

argonaute RISC catalytic subunit 4

enables

IBA

GO_REF:0000033

NCBI chr 4:126,383,280...126,427,379
Ensembl chr 4:126,383,334...126,427,265

Ankzf1

ankyrin repeat and zinc finger domain containing 1

enables

ISO
ISS

GO_REF:0000024 GO_REF:0000119

NCBI chr 1:75,168,794...75,176,031
Ensembl chr 1:75,168,795...75,176,031

Apex1

apurinic/apyrimidinic endonuclease 1

enables

ISO

RGD
GO_Central

PMID:19401441

GO_REF:0000096 RGD:2315668

NCBI chr14:51,162,406...51,164,645
Ensembl chr14:51,162,425...51,164,596

Cpsf3

cleavage and polyadenylation specificity factor 3

enables

IDA
IEA
IBA
ISO

(PMID:18955505)

PMID:18955505

GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr12:21,336,298...21,365,057
Ensembl chr12:21,335,392...21,365,057

Dicer1

dicer 1, ribonuclease type III

enables

ISO

GO_REF:0000119

NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211

Drosha

drosha, ribonuclease type III

enables

IDA
IEA

(PMID:20424607)

MGI
UniProt

PMID:20424607

GO_REF:0000117

NCBI chr15:12,824,893...12,935,377
Ensembl chr15:12,824,901...12,935,377

Endog

endonuclease G

enables

IBA

UniProt
Ensembl
InterPro
GO_Central

GO_REF:0000033

NCBI chr 2:30,061,525...30,064,057
Ensembl chr 2:30,061,505...30,064,081

Endou

endonuclease, polyU-specific

enables

ISS
IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr15:97,608,896...97,629,286
Ensembl chr15:97,608,896...97,629,220

Ern1

endoplasmic reticulum to nucleus signalling 1

enables

IDA
IEA
IBA
ISO

(PMID:15601821), (PMID:25164867)

WB
UniProt
Ensembl
GO_Central
InterPro

PMID:15601821 PMID:25164867

GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr11:106,285,474...106,378,701
Ensembl chr11:106,285,476...106,378,678

Ern2

endoplasmic reticulum to nucleus signalling 2

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 7:121,769,116...121,785,454
Ensembl chr 7:121,769,116...121,785,430

Exog

exo/endonuclease G

enables

IBA

GO_REF:0000033

NCBI chr 9:119,274,026...119,294,584
Ensembl chr 9:119,274,009...119,294,583

Ints11

integrator complex subunit 11

enables

ISO
IDA
IBA
IEA

(PMID:36309014)

PMID:36309014

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 4:155,954,006...155,973,561
Ensembl chr 4:155,954,003...155,973,560

Khnyn

KH and NYN domain containing

enables

IBA

GO_REF:0000033

NCBI chr14:56,122,269...56,136,237
Ensembl chr14:56,122,404...56,136,232

Lactb2

lactamase, beta 2

enables

IBA
IEA
ISS
ISO

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 1:13,695,069...13,730,749
Ensembl chr 1:13,693,554...13,730,770

Mblac1

metallo-beta-lactamase domain containing 1

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:138,192,576...138,193,883
Ensembl chr 5:138,192,576...138,193,883

Nob1

NIN1/RPN12 binding protein 1 homolog

enables

ISO
IBA
IEA

GO_REF:0000002 GO_REF:0000033 GO_REF:0000119

NCBI chr 8:108,139,121...108,151,670
Ensembl chr 8:108,139,118...108,151,683

Nynrin

NYN domain and retroviral integrase containing

enables

IBA

PMID:22121019 PMID:25582079

GO_REF:0000033

NCBI chr14:56,091,572...56,112,193
Ensembl chr14:56,091,467...56,112,193

Piwil1

piwi-like RNA-mediated gene silencing 1

enables

IMP
IBA

(PMID:22121019), (PMID:25582079)

FlyBase
GO_Central

GO_REF:0000033

NCBI chr 5:128,813,135...128,832,538
Ensembl chr 5:128,779,588...128,832,538

Piwil2

piwi-like RNA-mediated gene silencing 2

enables

IDA
IBA
IMP

(PMID:28633017)
(PMID:22020280), (PMID:23706823)

PMID:22020280 PMID:23706823 PMID:28633017

GO_REF:0000033

NCBI chr14:70,609,926...70,674,338
Ensembl chr14:70,609,926...70,666,832

Piwil4

piwi-like RNA-mediated gene silencing 4

NOT|enables

IMP

(PMID:22020280)

PMID:22020280

NCBI chr 9:14,613,072...14,651,968
Ensembl chr 9:14,607,526...14,652,036

Ppp1r8

protein phosphatase 1, regulatory subunit 8

enables

ISO

GO_REF:0000119

NCBI chr 4:132,554,235...132,570,480
Ensembl chr 4:132,554,240...132,570,480

Rcl1

RNA terminal phosphate cyclase-like 1

enables

IBA

GO_REF:0000033

NCBI chr19:29,078,761...29,121,251
Ensembl chr19:29,078,775...29,121,329

Rnasek

ribonuclease, RNase K

enables

IBA
IEA
ISS
ISO

GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119

NCBI chr11:70,128,949...70,130,678
Ensembl chr11:70,126,032...70,130,656
Ensembl chr11:70,126,032...70,130,656

Rnaset2a

ribonuclease T2A

enables

IBA

GO_REF:0000033

NCBI chr17:8,347,412...8,367,078
Ensembl chr17:8,334,277...8,366,929

Rnaset2b

ribonuclease T2B

enables

IBA

GO_REF:0000033

NCBI chr17:7,246,259...7,265,592
Ensembl chr17:7,238,033...7,278,698

Slfn14

schlafen 14

enables

IDA
IEA
IBA
ISO

(PMID:25996083)

PMID:25996083

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr11:83,165,936...83,177,552
Ensembl chr11:83,165,936...83,177,552

Slfn8

schlafen 8

enables

ISO
IDA

(PMID:29563550)

PMID:29563550

GO_REF:0000096 GO_REF:0000119

NCBI chr11:82,892,984...82,911,636
Ensembl chr11:82,892,984...82,911,636

Slfn9

schlafen 9

enables

ISO

GO_REF:0000096 GO_REF:0000119

NCBI chr11:82,865,142...82,883,041
Ensembl chr11:82,869,216...82,882,656

Smg6

SMG6 nonsense mediated mRNA decay factor

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr11:74,816,665...75,055,274
Ensembl chr11:74,816,649...75,055,274

Snd1

staphylococcal nuclease and tudor domain containing 1

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 6:28,480,332...28,935,161
Ensembl chr 6:28,475,138...28,935,161

Tsnax

translin-associated factor X

enables

IBA

GO_REF:0000033

NCBI chr 8:125,739,780...125,760,947
Ensembl chr 8:125,739,736...125,760,931

Ybey

ybeY metallopeptidase

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr10:76,295,401...76,304,948
Ensembl chr10:76,295,401...76,304,948

Zc3h12a

zinc finger CCCH type containing 12A

enables

IDA
IBA

(PMID:22055188), (PMID:26000482), (PMID:26255671)

PMID:22055188 PMID:26000482 PMID:26255671

GO_REF:0000033

NCBI chr 4:125,012,207...125,021,674
Ensembl chr 4:125,012,216...125,021,633

Zc3h12b

zinc finger CCCH-type containing 12B

enables

IBA

GO_REF:0000033

NCBI chr X:94,755,206...94,976,262
Ensembl chr X:94,755,284...94,976,243

Zc3h12c

zinc finger CCCH type containing 12C

enables

IBA

GO_REF:0000033

NCBI chr 9:52,020,869...52,080,028
Ensembl chr 9:52,022,644...52,079,872

Zc3h12d

zinc finger CCCH type containing 12D

enables

IBA

GO_REF:0000033

NCBI chr10:7,708,087...7,746,161
Ensembl chr10:7,708,234...7,746,160

RNA endonuclease activity producing 3'-phosphomonoesters, hydrolytic mechanism

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rida

reactive intermediate imine deaminase A homolog

enables

ISO
ISS

RGD
GO_Central
UniProt

PMID:10400702

GO_REF:0000024 GO_REF:0000096 RGD:9685547

NCBI chr15:34,484,168...34,495,392
Ensembl chr15:34,484,167...34,495,401

RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

argonaute RISC catalytic subunit 2

enables

IEA

GO_REF:0000104

NCBI chr15:72,967,693...73,056,777
Ensembl chr15:72,967,693...73,056,784

Dicer1

dicer 1, ribonuclease type III

enables

IEA

GO_REF:0000002

NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211

Elac1

elaC ribonuclease Z 1

enables

IEA

GO_REF:0000002

NCBI chr18:73,868,109...73,887,589
Ensembl chr18:73,868,109...73,887,550

Endov

endonuclease V

enables

IBA
IEA
ISO
ISS

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr11:119,382,173...119,402,291
Ensembl chr11:119,382,173...119,402,263

Pld6

phospholipase D family member 6

enables

IBA

GO_REF:0000033

NCBI chr11:59,674,719...59,678,483
Ensembl chr11:59,674,723...59,678,471

RNA exonuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cnot6

CCR4-NOT transcription complex, subunit 6

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr11:49,562,324...49,604,227
Ensembl chr11:49,562,330...49,603,550

Cnot7

CCR4-NOT transcription complex, subunit 7

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:40,945,579...40,968,888
Ensembl chr 8:40,945,581...40,968,888

Exosc1

exosome component 1

NOT|enables

ISO

(PMID:17174896)

NCBI chr19:41,911,417...41,921,836
Ensembl chr19:41,910,731...41,921,862

Exosc10

exosome component 10

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 4:148,642,870...148,666,854
Ensembl chr 4:148,642,886...148,666,858

Exosc2

exosome component 2

NOT|enables

ISO

(PMID:17174896)

NCBI chr 2:31,560,727...31,571,593
Ensembl chr 2:31,560,727...31,571,361

Exosc3

exosome component 3

NOT|enables

ISO

(PMID:17174896)

NCBI chr 4:45,316,613...45,320,616
Ensembl chr 4:45,316,613...45,342,732

Exosc4

exosome component 4

NOT|enables

ISO

(PMID:17174896)

NCBI chr15:76,211,597...76,214,870
Ensembl chr15:76,211,597...76,214,877

Exosc5

exosome component 5

NOT|enables

ISO

(PMID:17174896)

NCBI chr 7:25,358,578...25,367,457
Ensembl chr 7:25,358,589...25,370,793

Exosc6

exosome component 6

NOT|enables

ISO

(PMID:17174896)

NCBI chr 8:111,782,971...111,784,296
Ensembl chr 8:111,782,971...111,784,296

Exosc7

exosome component 7

NOT|enables

ISO

(PMID:17174896)

NCBI chr 9:122,942,310...122,965,194
Ensembl chr 9:122,942,280...122,965,194

Exosc8

exosome component 8

NOT|enables

ISO

(PMID:17174896)

NCBI chr 3:54,636,099...54,642,469
Ensembl chr 3:54,636,099...54,642,814

Exosc9

exosome component 9

NOT|enables

ISO

(PMID:17174896)

NCBI chr 3:36,606,755...36,619,876
Ensembl chr 3:36,606,755...36,619,876

Zc3h12a

zinc finger CCCH type containing 12A

enables

IDA

(PMID:19322177)

PMID:19322177

NCBI chr 4:125,012,207...125,021,674
Ensembl chr 4:125,012,216...125,021,633

RNA guanylyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rngtt

RNA guanylyltransferase and 5'-phosphatase

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 4:33,310,300...33,502,610
Ensembl chr 4:33,310,311...33,502,614

RNA helicase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Aqr

aquarius

enables

IEA

GO_REF:0000003

NCBI chr 2:113,931,642...114,005,788
Ensembl chr 2:113,931,651...114,017,505

Brip1

BRCA1 interacting protein C-terminal helicase 1

enables

IEA

GO_REF:0000003

NCBI chr11:85,948,957...86,092,041
Ensembl chr11:85,948,964...86,092,019

D1Pas1

DNA segment, Chr 1, Pasteur Institute 1

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr 1:186,699,613...186,702,824
Ensembl chr 1:186,699,613...186,702,824

Ddx1

DEAD box helicase 1

enables

ISS
IEA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr12:13,269,308...13,299,175
Ensembl chr12:13,266,974...13,299,214

Ddx10

DEAD box helicase 10

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr 9:53,009,754...53,159,423
Ensembl chr 9:53,009,935...53,159,353

Ddx17

DEAD box helicase 17

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr15:79,411,897...79,430,976
Ensembl chr15:79,411,937...79,430,942

Ddx18

DEAD box helicase 18

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr 1:121,481,564...121,495,709
Ensembl chr 1:121,481,564...121,495,718

Ddx19a

DEAD box helicase 19a

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000117

NCBI chr 8:111,701,623...111,724,456
Ensembl chr 8:111,701,628...111,724,432

Ddx19b

DEAD box helicase 19b

enables

IBA

GO_REF:0000033

NCBI chr 8:111,729,818...111,758,383
Ensembl chr 8:111,729,820...111,758,383

Ddx20

DEAD box helicase 20

enables

IEA
IBA

MGI
GO_Central
Ensembl
UniProt

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr 3:105,585,586...105,595,104
Ensembl chr 3:105,585,586...105,594,890

Ddx21

DExD box helicase 21

enables

ISS
IBA
IEA
ISO

(PMID:10860663)

PMID:10860663

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr10:62,416,026...62,438,077
Ensembl chr10:62,416,030...62,438,060

Ddx24

DEAD box helicase 24

enables

IEA

RGD
GO_Central
UniProt
InterPro

GO_REF:0000002 GO_REF:0000003

NCBI chr12:103,374,235...103,392,106
Ensembl chr12:103,374,241...103,392,089

Ddx25

DEAD box helicase 25

enables

ISO
IBA
IEA
IDA

(PMID:10608860)

PMID:10608860

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000096 GO_REF:0000117 RGD:68232

NCBI chr 9:35,453,144...35,469,766
Ensembl chr 9:35,447,943...35,469,824

Ddx27

DEAD box helicase 27

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr 2:166,857,233...166,876,865
Ensembl chr 2:166,857,113...166,876,867

Ddx28

DEAD box helicase 28

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr 8:106,736,248...106,738,118
Ensembl chr 8:106,736,253...106,738,514

Ddx31

DEAD/H box helicase 31

enables

IEA

GO_REF:0000003

NCBI chr 2:28,730,418...28,795,587
Ensembl chr 2:28,730,418...28,795,583

Ddx39a

DEAD box helicase 39a

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr 8:84,441,806...84,453,533
Ensembl chr 8:84,441,806...84,453,521

Ddx39b

DEAD box helicase 39b

enables

ISO
IEA
IBA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr17:35,460,722...35,472,683
Ensembl chr17:35,460,722...35,472,683

Ddx3x

DEAD box helicase 3, X-linked

enables

ISO
IEA
IBA
ISS

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119

NCBI chr X:13,147,261...13,160,222
Ensembl chr X:13,147,209...13,160,291

Ddx3y

DEAD box helicase 3, Y-linked

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr Y:1,260,715...1,286,630
Ensembl chr Y:1,260,771...1,286,629

Ddx4

DEAD box helicase 4

enables

IEA
IBA

UniProt
Ensembl
GO_Central
InterPro

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr13:112,734,867...112,790,342
Ensembl chr13:112,734,867...112,789,009

Ddx41

DEAD box helicase 41

enables

IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr13:55,678,223...55,684,471
Ensembl chr13:55,678,223...55,684,471

Ddx42

DEAD box helicase 42

enables

ISO
IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000119

NCBI chr11:106,107,715...106,139,966
Ensembl chr11:106,107,752...106,139,965

Ddx43

DEAD box helicase 43

enables

IBA

GO_REF:0000033

NCBI chr 9:78,303,059...78,330,871
Ensembl chr 9:78,303,059...78,330,869

Ddx46

DEAD box helicase 46

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr13:55,782,790...55,829,080
Ensembl chr13:55,782,841...55,829,069

Ddx47

DEAD box helicase 47

enables

IEA

UniProt
GO_Central
Ensembl
InterPro

GO_REF:0000002 GO_REF:0000003

NCBI chr 6:134,988,575...135,000,739
Ensembl chr 6:134,988,575...135,000,739

Ddx49

DEAD box helicase 49

enables

IEA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr 8:70,745,516...70,755,121
Ensembl chr 8:70,745,516...70,755,139

Ddx5

DEAD box helicase 5

enables

ISO
IBA
IEA
ISS

RGD
GO_Central
UniProt
InterPro

PMID:7525583

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000096 GO_REF:0000119 RGD:5128519

NCBI chr11:106,671,181...106,680,011
Ensembl chr11:106,671,181...106,680,011

Ddx50

DExD box helicase 50

enables

IEA
IBA

GO_REF:0000003 GO_REF:0000033

NCBI chr10:62,451,571...62,487,260
Ensembl chr10:62,451,674...62,486,997

Ddx51

DEAD box helicase 51

enables

IEA

GO_REF:0000003

NCBI chr 5:110,801,298...110,810,885
Ensembl chr 5:110,801,317...110,808,362

Ddx52

DExD box helicase 52

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr11:83,831,659...83,853,914
Ensembl chr11:83,832,888...83,853,914

Ddx54

DEAD box helicase 54

enables

ISO
IEA
ISS

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:120,751,182...120,766,657
Ensembl chr 5:120,750,804...120,766,657

Ddx55

DEAD box helicase 55

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr 5:124,690,895...124,707,723
Ensembl chr 5:124,690,927...124,707,723

Ddx56

DEAD box helicase 56

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr11:6,205,343...6,218,389
Ensembl chr11:6,208,919...6,217,772

Ddx59

DEAD box helicase 59

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr 1:136,343,009...136,384,019
Ensembl chr 1:136,343,009...136,367,896

Ddx6

DEAD-box helicase 6

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr 9:44,514,113...44,552,028
Ensembl chr 9:44,516,189...44,552,028

Dhx15

DEAH-box helicase 15

enables

ISS
IEA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:52,307,545...52,347,888
Ensembl chr 5:52,307,545...52,347,856

Dhx29

DExH-box helicase 29

enables

IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000104

NCBI chr13:113,063,976...113,105,968
Ensembl chr13:113,063,988...113,105,966

Dhx30

DExH-box helicase 30

enables

IDA
IBA
IEA
ISS
ISO

(PMID:25219788)

PMID:25219788

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr 9:109,913,387...109,946,728
Ensembl chr 9:109,913,388...109,946,898

Dhx32

DEAH-box helicase 32 (putative)

enables

IEA

GO_REF:0000003

NCBI chr 7:133,322,671...133,384,514
Ensembl chr 7:133,322,671...133,384,455

Dhx33

DEAH-box helicase 33

enables

IEA

GO_REF:0000003

NCBI chr11:70,874,917...70,895,258
Ensembl chr11:70,874,917...70,895,263

Dhx34

DExH-box helicase 34

enables

IEA

GO_REF:0000003

NCBI chr 7:15,931,145...15,956,005
Ensembl chr 7:15,931,072...15,955,962

Dhx36

DEAH-box helicase 36

enables

ISS
IEA
IBA
ISO

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 3:62,375,436...62,414,464
Ensembl chr 3:62,375,434...62,414,425

Dhx40

DEAH-box helicase 40

enables

IEA

GO_REF:0000003

NCBI chr11:86,659,675...86,698,695
Ensembl chr11:86,659,672...86,698,572

Dhx57

DExH-box helicase 57

enables

IEA

GO_REF:0000003

NCBI chr17:80,545,733...80,597,620
Ensembl chr17:80,545,738...80,597,905

Dhx58

DExH-box helicase 58

enables

ISO
IEA
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr11:100,585,710...100,595,165
Ensembl chr11:100,585,710...100,595,097

Dhx8

DEAH-box helicase 8

enables

IBA
IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr11:101,623,782...101,658,184
Ensembl chr11:101,623,745...101,658,184

Dhx9

DExH-box helicase 9

enables

ISS
IBA
IEA
ISO

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000119

NCBI chr 1:153,331,506...153,363,464
Ensembl chr 1:153,331,504...153,363,406

Eif4a1

eukaryotic translation initiation factor 4A1

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr11:69,557,762...69,563,249
Ensembl chr11:69,557,762...69,563,249

Eif4a2

eukaryotic translation initiation factor 4A2

enables

IEA

GO_REF:0000002 GO_REF:0000003

NCBI chr16:22,924,846...22,932,882
Ensembl chr16:22,926,194...22,932,886

Eif4a3

eukaryotic translation initiation factor 4A3

enables

IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000119

NCBI chr11:119,179,189...119,190,869
Ensembl chr11:119,179,189...119,190,915

Eif4a3l1

eukaryotic translation initiation factor 4A3 like 1

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr 6:136,304,537...136,306,981
Ensembl chr 6:136,304,537...136,306,981

Eif4a3l2

eukaryotic translation initiation factor 4A3 like 2

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr 6:116,527,132...116,529,563
Ensembl chr 6:116,528,102...116,529,463

Fancm

Fanconi anemia, complementation group M

enables

IEA

GO_REF:0000003

NCBI chr12:65,120,884...65,178,616
Ensembl chr12:65,122,377...65,178,832

G3bp1

G3BP stress granule assembly factor 1

enables

ISO
IEA
IBA

GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr11:55,360,521...55,391,722
Ensembl chr11:55,360,511...55,395,664

Helz2

helicase with zinc finger 2, transcriptional coactivator

enables

ISS
ISO

GO_REF:0000024 GO_REF:0000119

NCBI chr 2:180,869,408...180,883,851
Ensembl chr 2:180,869,408...180,883,820

Ifih1

interferon induced with helicase C domain 1

enables

ISO
IEA
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 2:62,426,137...62,476,599
Ensembl chr 2:62,426,142...62,476,599

Ighmbp2

immunoglobulin mu DNA binding protein 2

enables

IEA

GO_REF:0000003

NCBI chr19:3,309,076...3,333,011
Ensembl chr19:3,309,076...3,333,017

Mov10

Mov10 RISC complex RNA helicase

enables

IEA

GO_REF:0000003

NCBI chr 3:104,702,144...104,725,935
Ensembl chr 3:104,702,152...104,725,879

Mov10l1

Mov10 like RISC complex RNA helicase 1

enables

IMP
IEA

(PMID:25762440)

PMID:25762440

GO_REF:0000003

NCBI chr15:88,867,094...88,939,355
Ensembl chr15:88,867,112...88,939,355

Mtrex

Mtr4 exosome RNA helicase

enables

ISO
IBA
IEA
ISS

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr13:113,004,306...113,063,914
Ensembl chr13:113,003,952...113,063,932

Rigi

RNA sensor RIG-I

enables

ISO
IEA
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 4:40,203,775...40,239,843
Ensembl chr 4:40,203,773...40,239,828

Skic2

SKI2 subunit of superkiller complex

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr17:35,058,202...35,069,180
Ensembl chr17:35,058,204...35,069,186

Snrnp200

small nuclear ribonucleoprotein 200 (U5)

enables

ISS
IEA
IBA
ISO

GO_Central
Ensembl
UniProt
InterPro

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 2:127,050,306...127,082,373
Ensembl chr 2:127,050,306...127,082,371

Supv3l1

suppressor of var1, 3-like 1 (S. cerevisiae)

enables

ISO
IEA
ISS

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr10:62,265,000...62,287,294
Ensembl chr10:62,264,988...62,285,517

Tdrd12

tudor domain containing 12

enables

IEA

GO_REF:0000003

NCBI chr 7:35,166,366...35,237,206
Ensembl chr 7:35,168,523...35,237,170

Tdrd9

tudor domain containing 9

enables

IEA

HGNC-UCL
InterPro
Ensembl
GO_Central

GO_REF:0000003

NCBI chr12:111,937,922...112,035,288
Ensembl chr12:111,937,993...112,035,288

Upf1

UPF1 RNA helicase and ATPase

enables

ISS
IEA
IBA
ISO

GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:70,784,143...70,806,418
Ensembl chr 8:70,784,175...70,805,928

Ythdc2

YTH domain containing 2

enables

IEA

MGI
Ensembl
GO_Central
UniProt

GO_REF:0000003

NCBI chr18:44,961,521...45,022,782
Ensembl chr18:44,960,813...45,022,791

RNA lariat debranching enzyme activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dbr1

debranching RNA lariats 1

enables

IDA
IEA
IBA
ISO
ISS

(PMID:10982890)

PMID:10982890

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr 9:99,457,839...99,467,060
Ensembl chr 9:99,457,852...99,466,554

RNA ligase (ATP) activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rlig1

RNA 5'-phosphate and 3'-OH ligase 1

enables

IEA
ISO

Ensembl
InterPro
GO_Central

GO_REF:0000002 GO_REF:0000107 GO_REF:0000119

NCBI chr10:100,408,136...100,425,252
Ensembl chr10:100,408,127...100,426,285

RNA ligase (GTP) activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rtcb

RNA 2',3'-cyclic phosphate and 5'-OH ligase

enables

ISS
ISO
IEA
IBA

UniProt
GO_Central
InterPro
RHEA
Ensembl

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr10:85,774,501...85,793,657
Ensembl chr10:85,774,501...85,793,687

RNA methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bcdin3d

BCDIN3 domain containing

enables

ISS
IEA
IBA
ISO

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr15:99,367,965...99,372,611
Ensembl chr15:99,367,960...99,372,611

Henmt1

HEN1 methyltransferase homolog 1 (Arabidopsis)

enables

IDA
IEA
IBA

(PMID:17652135)

PMID:17652135

GO_REF:0000002 GO_REF:0000033 GO_REF:0000117

NCBI chr 3:108,846,770...108,887,201
Ensembl chr 3:108,847,375...108,868,090

Mepce

methylphosphate capping enzyme

enables

ISO
IEA
IBA
ISS

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:137,780,168...137,785,915
Ensembl chr 5:137,780,168...137,785,917

Mettl2

methyltransferase 2, methylcytidine

enables

IEA

GO_REF:0000117

NCBI chr11:105,017,251...105,031,972
Ensembl chr11:105,017,251...105,031,220

Mettl3

methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit

enables

ISO

GO_REF:0000119

NCBI chr14:52,532,298...52,548,555
Ensembl chr14:52,532,298...52,542,585

Mettl4

methyltransferase 4, N6-adenosine

enables

IBA
ISO
ISS

GO_REF:0000024 GO_REF:0000033 GO_REF:0000119

NCBI chr17:95,030,018...95,057,579
Ensembl chr17:95,030,018...95,057,447

Mettl8

methyltransferase 8, methylcytidine

enables

IEA

GO_REF:0000117

NCBI chr 2:70,794,902...70,886,729
Ensembl chr 2:70,794,905...70,885,927

Mrm1

mitochondrial rRNA methyltransferase 1

enables

IEA

GO_REF:0000002

NCBI chr11:84,703,887...84,710,341
Ensembl chr11:84,703,887...84,710,341

Mrm3

mitochondrial rRNA methyltransferase 3

enables

IEA

GO_REF:0000002

NCBI chr11:76,134,562...76,141,451
Ensembl chr11:76,134,541...76,141,445

Nop2

NOP2 nucleolar protein

enables

IEA

GO_REF:0000002

NCBI chr 6:125,108,829...125,121,716
Ensembl chr 6:125,108,872...125,121,716

Nsun2

NOL1/NOP2/Sun domain family member 2

enables

IEA

GO_REF:0000002

NCBI chr13:69,760,135...69,783,899
Ensembl chr13:69,681,865...69,783,899

Nsun3

NOL1/NOP2/Sun domain family member 3

enables

IEA

GO_REF:0000002

NCBI chr16:62,552,807...62,607,238
Ensembl chr16:62,552,807...62,607,181

NOL1/NOP2/Sun domain family, member 4

enables

ISO
IEA

GO_REF:0000002 GO_REF:0000119

NCBI chr 4:115,890,202...115,911,076
Ensembl chr 4:115,890,039...115,911,073

Nsun5

NOL1/NOP2/Sun domain family, member 5

enables

IEA

GO_REF:0000002

NCBI chr 5:135,398,784...135,405,661
Ensembl chr 5:135,398,807...135,405,659

Nsun6

NOL1/NOP2/Sun domain family member 6

enables

IEA

GO_REF:0000002

NCBI chr 2:14,995,255...15,059,683
Ensembl chr 2:14,999,942...15,059,880

Tmt1a

thiol methyltransferase 1A1

enables

ISO

GO_REF:0000119

NCBI chr15:100,201,969...100,227,882
Ensembl chr15:100,202,021...100,226,543

Tmt1a2

thiol methyltransferase 1A2

enables

ISO

GO_REF:0000119

NCBI chr15:100,251,081...100,259,700
Ensembl chr15:100,251,081...100,259,721

Tmt1a3

thiol methyltransferase 1A3

enables

ISO

GO_REF:0000119

NCBI chr15:100,232,687...100,246,267
Ensembl chr15:100,232,810...100,238,256

Trmt2a

TRM2 tRNA methyltransferase 2A

enables

IEA

GO_REF:0000002

NCBI chr16:18,066,747...18,072,636
Ensembl chr16:18,066,543...18,072,636

Trmt2b

TRM2 tRNA methyltransferase 2B

enables

IEA

GO_REF:0000002

NCBI chr X:133,123,704...133,177,770
Ensembl chr X:133,123,088...133,177,733

RNA NAD+-cap (NAD+-forming) hydrolase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dxo

decapping exoribonuclease

enables

IDA
IEA

(PMID:28283058), (PMID:32374864)

PMID:28283058 PMID:32374864

GO_REF:0000116

NCBI chr17:35,055,998...35,058,162
Ensembl chr17:35,055,995...35,058,209

Nudt16

nudix hydrolase 16

enables

IEA

GO_REF:0000116

NCBI chr 9:105,006,531...105,010,332
Ensembl chr 9:105,006,102...105,009,023

RNA NAD-cap (NMN-forming) hydrolase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Nudt12

nudix hydrolase 12

enables

IDA
IEA

(PMID:31101919)

PMID:8448182 PMID:23170778

PMID:31101919

GO_REF:0000116

NCBI chr17:59,307,104...59,320,317
Ensembl chr17:59,306,613...59,320,367

RNA nuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ang

angiogenin, ribonuclease, RNase A family, 5

enables

IDA
IEA
IBA
ISS
ISO

(PMID:23170778), (PMID:8448182)

MGI
UniProt
GO_Central

GO_REF:0000024 GO_REF:0000033 GO_REF:0000117 GO_REF:0000119

NCBI chr14:51,328,607...51,339,462
Ensembl chr14:51,328,607...51,339,466

Ang2

angiogenin, ribonuclease A family, member 2

enables

IDA
IEA
IBA
ISO

(PMID:23170778)

MGI
UniProt
GO_Central

PMID:23170778

GO_REF:0000033 GO_REF:0000117 GO_REF:0000119

NCBI chr14:51,432,781...51,436,400
Ensembl chr14:51,432,781...51,436,605

Ang3

angiogenin, ribonuclease A family, member 3

enables

IDA
IEA
IBA
ISO

(PMID:23170778)

MGI
UniProt
GO_Central

PMID:23170778

GO_REF:0000033 GO_REF:0000117 GO_REF:0000119

Ang4

angiogenin, ribonuclease A family, member 4

enables

ISO
IBA
IEA
IMP

(PMID:17279775)

PMID:17279775

GO_REF:0000033 GO_REF:0000117 GO_REF:0000119

NCBI chr14:52,001,349...52,011,047
Ensembl chr14:52,001,335...52,011,047

Ang5

angiogenin, ribonuclease A family, member 5

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:44,194,526...44,200,537
Ensembl chr14:44,194,526...44,200,537

Ang6

angiogenin, ribonuclease A family, member 6

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:44,239,121...44,248,945
Ensembl chr14:44,239,121...44,243,875

Dis3

DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease

enables

IEA

GO_REF:0000002

NCBI chr14:99,314,070...99,337,217
Ensembl chr14:99,312,642...99,337,206

Dis3l

DIS3 like exosome 3'-5' exoribonuclease

enables

IEA

GO_REF:0000002

NCBI chr 9:64,214,038...64,248,707
Ensembl chr 9:64,214,038...64,248,570

Dis3l2

DIS3 like 3'-5' exoribonuclease 2

enables

ISS
IEA
ISO

GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 1:86,629,646...86,977,819
Ensembl chr 1:86,631,530...86,977,817

Ear1

eosinophil-associated, ribonuclease A family, member 1

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:44,056,222...44,057,096
Ensembl chr14:44,056,222...44,112,974

Ear10

eosinophil-associated, ribonuclease A family, member 10

enables

ISS
IBA
ISO
IDA

(PMID:11331942)

PMID:11331942

GO_REF:0000033 GO_REF:0000119

NCBI chr14:44,160,355...44,161,053
Ensembl chr14:44,160,177...44,161,016

Ear14

eosinophil-associated, ribonuclease A family, member 14

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:51,441,152...51,441,613
Ensembl chr14:51,440,848...51,441,795

Ear2

eosinophil-associated, ribonuclease A family, member 2

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:44,340,111...44,340,988
Ensembl chr14:44,340,111...44,340,991

Ear3

eosinophil-associated, ribonuclease A family, member 3

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

Ear4

eosinophil-associated, ribonuclease A family, member 4

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

Ear6

eosinophil-associated, ribonuclease A family, member 6

enables

ISS
IBA
ISO
IDA

(PMID:11331942)

PMID:11331942

GO_REF:0000033 GO_REF:0000119

NCBI chr14:52,091,225...52,092,100
Ensembl chr14:52,091,156...52,092,100

Ear7

eosinophil-associated, ribonuclease A family, member 7

enables

IDA

(PMID:8901588)

MGI

PMID:8901588

Endou

endonuclease, polyU-specific

enables

IEA

GO_REF:0000117

NCBI chr15:97,608,896...97,629,286
Ensembl chr15:97,608,896...97,629,220

Ern1

endoplasmic reticulum to nucleus signalling 1

enables

IEA

GO_REF:0000002

NCBI chr11:106,285,474...106,378,701
Ensembl chr11:106,285,476...106,378,678

Ern2

endoplasmic reticulum to nucleus signalling 2

enables

IEA

GO_REF:0000002

NCBI chr 7:121,769,116...121,785,454
Ensembl chr 7:121,769,116...121,785,430

Helz2

helicase with zinc finger 2, transcriptional coactivator

enables

IEA

GO_REF:0000002

NCBI chr 2:180,869,408...180,883,851
Ensembl chr 2:180,869,408...180,883,820

Marf1

meiosis regulator and mRNA stability 1

enables

IEA

GO_REF:0000002

NCBI chr16:13,927,030...13,977,157
Ensembl chr16:13,927,037...13,981,215

N4bp1

NEDD4 binding protein 1

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:87,567,764...87,612,489
Ensembl chr 8:87,534,788...87,611,886

Rnase1

ribonuclease, RNase A family, 1 (pancreatic)

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:51,382,459...51,384,224
Ensembl chr14:51,382,455...51,384,242

Rnase10

ribonuclease, RNase A family, 10 (non-active)

NOT|enables

IKR
IBA

(PMID:15676279)

GO_REF:0000033

NCBI chr14:51,245,208...51,248,218
Ensembl chr14:51,245,208...51,248,215

Rnase11

ribonuclease, RNase A family, 11 (non-active)

NOT|enables

IKR
IBA

(PMID:15676279)

GO_REF:0000033

NCBI chr14:51,286,150...51,293,159
Ensembl chr14:51,286,908...51,287,620

Rnase12

ribonuclease, RNase A family, 12 (non-active)

NOT|enables

IKR
IBA

(PMID:15676279)

GO_REF:0000033

NCBI chr14:51,294,155...51,294,699
Ensembl chr14:51,294,155...51,295,118

Rnase13

ribonuclease, RNase A family, 13 (non-active)

NOT|enables

IKR
IBA

(PMID:15676279)

GO_REF:0000033

NCBI chr14:52,158,817...52,160,734
Ensembl chr14:52,158,819...52,160,230

Rnase2a

ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin)

enables

ISS
IBA
ISO

(PMID:11331942)

PMID:11331942

GO_REF:0000033 GO_REF:0000119

NCBI chr14:51,492,718...51,493,569
Ensembl chr14:51,492,719...51,493,569

Rnase2b

ribonuclease, RNase A family, 2B (liver, eosinophil-derived neurotoxin)

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:51,399,717...51,400,475
Ensembl chr14:51,399,717...51,400,475

Rnase4

ribonuclease, RNase A family 4

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:51,328,534...51,343,608
Ensembl chr14:51,328,534...51,343,608

Rnase6

ribonuclease, RNase A family, 6

enables

ISO
IBA

GO_REF:0000033 GO_REF:0000119

NCBI chr14:51,361,365...51,369,644
Ensembl chr14:51,361,365...51,369,644

Rnase9

ribonuclease, RNase A family, 9 (non-active)

NOT|enables

IKR
IBA

(PMID:15676279)

RGD
GO_Central
InterPro
Ensembl

GO_REF:0000033

NCBI chr14:51,275,916...51,279,360
Ensembl chr14:51,275,916...51,279,326

Rnasel

ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)

enables

ISO
IBA
IEA

PMID:8469023

GO_REF:0000002 GO_REF:0000033 GO_REF:0000096 GO_REF:0000107 GO_REF:0000119 RGD:2291995

NCBI chr 1:153,625,089...153,644,441
Ensembl chr 1:153,625,172...153,639,967

Rnaset2a

ribonuclease T2A

enables

ISO

GO_REF:0000119

NCBI chr17:8,347,412...8,367,078
Ensembl chr17:8,334,277...8,366,929

Rnaset2b

ribonuclease T2B

enables

ISO

GO_REF:0000119

NCBI chr17:7,246,259...7,265,592
Ensembl chr17:7,238,033...7,278,698

Samhd1

SAM domain and HD domain, 1

enables
NOT|enables

ISO
ISS

GO_REF:0000024 GO_REF:0000119

NCBI chr 2:156,939,454...156,977,016
Ensembl chr 2:156,939,453...156,977,185

Slfn1

schlafen 1

enables

ISO

GO_REF:0000119

NCBI chr11:83,007,646...83,013,496
Ensembl chr11:83,007,675...83,013,496

Slfn2

schlafen 2

enables

ISO

GO_REF:0000119

NCBI chr11:82,955,938...82,961,504
Ensembl chr11:82,955,938...82,961,504

Slfn3

schlafen 3

enables

ISO

GO_REF:0000119

NCBI chr11:83,082,156...83,105,980
Ensembl chr11:83,082,156...83,105,980

Slfn4

schlafen 4

enables

ISO

GO_REF:0000119

NCBI chr11:83,066,001...83,081,042
Ensembl chr11:83,066,012...83,081,042

Zc3h12a

zinc finger CCCH type containing 12A

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 4:125,012,207...125,021,674
Ensembl chr 4:125,012,216...125,021,633

RNA strand annealing activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ddx3x

DEAD box helicase 3, X-linked

enables

ISO

GO_REF:0000119

NCBI chr X:13,147,261...13,160,222
Ensembl chr X:13,147,209...13,160,291

Eif4b

eukaryotic translation initiation factor 4B

enables

IBA

GO_REF:0000033

NCBI chr15:101,982,208...102,005,608
Ensembl chr15:101,982,208...102,005,608

Eif4h

eukaryotic translation initiation factor 4H

enables

IBA

GO_REF:0000033

NCBI chr 5:134,648,726...134,668,263
Ensembl chr 5:134,648,575...134,668,344

Fmr1

fragile X messenger ribonucleoprotein 1

enables

ISO
ISS

GO_REF:0000024 GO_REF:0000119

NCBI chr X:67,722,144...67,761,569
Ensembl chr X:67,722,147...67,761,569

Fxr1

FMR1 autosomal homolog 1

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 3:34,074,133...34,124,129
Ensembl chr 3:34,074,092...34,124,471

Hnrnpa1

heterogeneous nuclear ribonucleoprotein A1

enables

ISO

RGD
GO_Central

PMID:1703006

GO_REF:0000096 RGD:10045979

NCBI chr15:103,148,840...103,155,119
Ensembl chr15:103,148,859...103,155,119

RNA topoisomerase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Top3b

topoisomerase (DNA) III beta

enables

IEA
ISO

GO_REF:0000107 GO_REF:0000119

NCBI chr16:16,688,587...16,710,850
Ensembl chr16:16,688,600...16,710,854

RNA uridylyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tut1

terminal uridylyl transferase 1, U6 snRNA-specific

enables

ISO
IEA
ISS

Reactome
UniProt
GO_Central
RHEA

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr19:8,931,199...8,943,572
Ensembl chr19:8,931,211...8,943,574

Tut4

terminal uridylyl transferase 4

enables

TAS
IEA
IBA
ISO
IDA

(PMID:19701194), (PMID:28671666)

PMID:19701194 PMID:28671666

GO_REF:0000003 GO_REF:0000033 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119 Reactome:R-MMU-9820884

NCBI chr 4:108,316,607...108,416,612
Ensembl chr 4:108,316,623...108,416,618

Tut7

terminal uridylyl transferase 7

enables

TAS
IEA
IBA
ISO
ISS

Reactome
RHEA
GO_Central
UniProt

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000116 GO_REF:0000119 Reactome:R-MMU-9820884

NCBI chr13:59,919,690...59,971,060
Ensembl chr13:59,919,375...59,970,961

RNA-3'-phosphate cyclase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Rcl1

RNA terminal phosphate cyclase-like 1

NOT|enables

ISA

(PMID:10790377)

MGI

PMID:10790377

NCBI chr19:29,078,761...29,121,251
Ensembl chr19:29,078,775...29,121,329

Rtca

RNA 3'-terminal phosphate cyclase

enables

ISO
IEA
IBA
ISS

GO_Central
RHEA
Ensembl
UniProt
InterPro

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 3:116,282,612...116,301,852
Ensembl chr 3:116,282,612...116,301,857

RNA-directed RNA polymerase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Polr2a

polymerase (RNA) II (DNA directed) polypeptide A

enables

ISO

GO_REF:0000119

NCBI chr11:69,624,823...69,649,459
Ensembl chr11:69,624,823...69,649,463

Polr2b

polymerase (RNA) II (DNA directed) polypeptide B

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 5:77,458,331...77,497,175
Ensembl chr 5:77,457,994...77,497,171

Tert

telomerase reverse transcriptase

enables

IEA
ISO

GO_REF:0000107 GO_REF:0000119

NCBI chr13:73,775,030...73,797,962
Ensembl chr13:73,775,030...73,797,962

RNA-DNA hybrid ribonuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Fen1

flap structure specific endonuclease 1

enables

IBA
ISO

GO_REF:0000033 GO_REF:0000119

NCBI chr19:10,176,496...10,181,757
Ensembl chr19:10,176,496...10,181,533

Nynrin

NYN domain and retroviral integrase containing

enables

IEA

MGI
GO_Central
UniProt
InterPro

GO_REF:0000002

NCBI chr14:56,091,572...56,112,193
Ensembl chr14:56,091,467...56,112,193

Rnaseh1

ribonuclease H1

enables

ISS
IBA
IEA
ISO
IDA

(PMID:9799596)
(PMID:15831789)

PMID:9799596 PMID:15831789

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000117 GO_REF:0000119

NCBI chr12:28,699,600...28,709,591
Ensembl chr12:28,699,601...28,709,588

Rnaseh2a

ribonuclease H2, large subunit

enables

ISO
IEA
IBA
ISS

GO_Central
UniProt
InterPro
Ensembl

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:85,683,239...85,694,498
Ensembl chr 8:85,683,239...85,696,396

rRNA (adenine-N6,N6-)-dimethyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dimt1

DIM1 rRNA methyltransferase and ribosome maturation factor

enables

ISO
IEA
IBA

GO_REF:0000002 GO_REF:0000033 GO_REF:0000119

NCBI chr13:107,083,637...107,097,833
Ensembl chr13:107,083,635...107,096,732

Tfb1m

transcription factor B1, mitochondrial

enables

ISO
IEA
IBA
IMP

(PMID:19356719)

PMID:19356719

GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr17:3,569,119...3,608,064
Ensembl chr17:3,569,531...3,608,056

Tfb2m

transcription factor B2, mitochondrial

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr 1:179,355,617...179,373,870
Ensembl chr 1:179,355,620...179,373,832

rRNA (adenine-N6-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl5

methyltransferase 5, N6-adenosine

enables

IDA
IEA
IBA
ISO

(PMID:32783360)

PMID:32783360

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 2:69,701,539...69,717,961
Ensembl chr 2:69,701,542...69,715,959

Tfb2m

transcription factor B2, mitochondrial

enables

IEA

GO_REF:0000116

NCBI chr 1:179,355,617...179,373,870
Ensembl chr 1:179,355,620...179,373,832

Zcchc4

zinc finger, CCHC domain containing 4

enables

IBA
IEA
ISS
ISO

GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:52,932,751...52,982,008
Ensembl chr 5:52,932,751...52,982,007

rRNA (cytosine-C5-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Nop2

NOP2 nucleolar protein

enables

ISS
IBA
ISO

GO_REF:0000024 GO_REF:0000033 GO_REF:0000119

NCBI chr 6:125,108,829...125,121,716
Ensembl chr 6:125,108,872...125,121,716

NOL1/NOP2/Sun domain family, member 4

enables

ISO

GO_REF:0000119

NCBI chr 4:115,890,202...115,911,076
Ensembl chr 4:115,890,039...115,911,073

Nsun5

NOL1/NOP2/Sun domain family, member 5

enables

IDA
IEA
ISO

(PMID:31722427)

PMID:31722427

GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr 5:135,398,784...135,405,661
Ensembl chr 5:135,398,807...135,405,659

rRNA (cytosine-N4-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl15

methyltransferase like 15

enables

ISO
IBA
IEA

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 2:108,922,642...109,111,100
Ensembl chr 2:108,922,642...109,111,093

rRNA (guanine) methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bud23

BUD23, rRNA methyltransferase and ribosome maturation factor

enables

ISO
IEA
IBA
ISS

GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:135,081,811...135,093,813
Ensembl chr 5:135,081,811...135,093,813

FtsJ RNA 2'-O-methyltransferase 3

enables

IBA

GO_REF:0000033

NCBI chr11:106,139,964...106,146,910
Ensembl chr11:106,139,968...106,146,905

Mrm1

mitochondrial rRNA methyltransferase 1

enables

IBA

GO_REF:0000033

NCBI chr11:84,703,887...84,710,341
Ensembl chr11:84,703,887...84,710,341

rRNA (guanosine-2'-O-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mrm1

mitochondrial rRNA methyltransferase 1

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr11:84,703,887...84,710,341
Ensembl chr11:84,703,887...84,710,341

Mrm3

mitochondrial rRNA methyltransferase 3

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr11:76,134,562...76,141,451
Ensembl chr11:76,134,541...76,141,445

rRNA (pseudouridine) methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Emg1

EMG1 N1-specific pseudouridine methyltransferase

enables

ISO
IEA
IBA
ISS

GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 6:124,681,344...124,689,118
Ensembl chr 6:124,681,048...124,689,141

rRNA (uridine-2'-O-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

FtsJ RNA 2'-O-methyltransferase 3

enables

IBA

GO_REF:0000033

NCBI chr11:106,139,964...106,146,910
Ensembl chr11:106,139,968...106,146,905

Mrm2

mitochondrial rRNA methyltransferase 2

enables

IEA
IBA
ISO

GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 5:140,313,429...140,317,653
Ensembl chr 5:140,313,429...140,317,653

rRNA (uridine-C5-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt2b

TRM2 tRNA methyltransferase 2B

enables

IDA
IEA
ISO

(PMID:31736397)

PMID:31736397

GO_REF:0000107 GO_REF:0000119

NCBI chr X:133,123,704...133,177,770
Ensembl chr X:133,123,088...133,177,733

rRNA (uridine-N3-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Fdxacb1

ferredoxin-fold anticodon binding domain containing 1

enables

IBA
IEA

GO_REF:0000002 GO_REF:0000033

NCBI chr 9:50,679,538...50,683,981
Ensembl chr 9:50,679,536...50,684,648

Spout1

SPOUT domain containing methyltransferase 1

enables

ISO
ISS
IEA

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 2:30,063,458...30,068,506
Ensembl chr 2:30,063,465...30,068,471

rRNA methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Fbl

fibrillarin

enables

IBA

GO_REF:0000033

NCBI chr 7:27,868,293...27,878,701
Ensembl chr 7:27,869,135...27,878,694

Fbll1

fibrillarin-like 1

enables

IBA

GO_REF:0000033

NCBI chr11:35,688,207...35,689,711
Ensembl chr11:35,688,209...35,689,711

FtsJ RNA 2'-O-methyltransferase 3

enables

IEA

GO_REF:0000002 GO_REF:0000104

NCBI chr11:106,139,964...106,146,910
Ensembl chr11:106,139,968...106,146,905

NOL1/NOP2/Sun domain family, member 4

enables

ISO

HGNC-UCL
Ensembl
GO_Central

GO_REF:0000119

NCBI chr 4:115,890,202...115,911,076
Ensembl chr 4:115,890,039...115,911,073

rRNA small subunit aminocarboxypropyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tsr3

TSR3 20S rRNA accumulation

enables

IEA
ISO

RHEA
InterPro
GO_Central

GO_REF:0000002 GO_REF:0000116 GO_REF:0000119

NCBI chr17:25,459,120...25,461,773
Ensembl chr17:25,459,141...25,461,773

second spliceosomal transesterification activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Slu7

SLU7 splicing factor homolog (S. cerevisiae)

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr11:43,324,550...43,338,809
Ensembl chr11:43,324,571...43,338,808

selenocysteine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Sars1

seryl-tRNA synthetase 1

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 3:108,332,180...108,352,575
Ensembl chr 3:108,332,181...108,352,525

Ser-tRNA(Ala) deacylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

alanyl-tRNA synthetase 1

enables

IDA
IMP

(PMID:25422440)
(PMID:16906134), (PMID:25422440), (PMID:29769718)

PMID:16906134 PMID:25422440 PMID:29769718

NCBI chr 8:111,759,781...111,784,237
Ensembl chr 8:111,759,776...111,784,296

alanyl-tRNA synthetase domain containing 1

enables

IDA
IBA

(PMID:21285375)

GO_Central
UniProt
Ensembl
InterPro
RHEA

PMID:21285375

GO_REF:0000033

NCBI chr11:101,297,489...101,308,422
Ensembl chr11:101,297,665...101,308,441

serine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Sars1

seryl-tRNA synthetase 1

enables

ISO
IBA
IEA
ISS

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr 3:108,332,180...108,352,575
Ensembl chr 3:108,332,181...108,352,525

Sars2

seryl-aminoacyl-tRNA synthetase 2

enables

ISS
IEA
IBA

(PMID:10764807)

UniProt
InterPro
GO_Central
RHEA

PMID:10764807

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000116

NCBI chr 7:28,441,393...28,453,304
Ensembl chr 7:28,441,417...28,453,296

small RNA 2'-O-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bcdin3d

BCDIN3 domain containing

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr15:99,367,965...99,372,611
Ensembl chr15:99,367,960...99,372,611

Henmt1

HEN1 methyltransferase homolog 1 (Arabidopsis)

enables

IEA
ISO

RHEA
Ensembl
GO_Central

GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 3:108,846,770...108,887,201
Ensembl chr 3:108,847,375...108,868,090

template-free RNA nucleotidyltransferase

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tert

telomerase reverse transcriptase

enables

ISO
IEA

PMID:12060739 PMID:29579307

GO_REF:0000107 GO_REF:0000119

NCBI chr13:73,775,030...73,797,962
Ensembl chr13:73,775,030...73,797,962

threonine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tars1

threonyl-tRNA synthetase 1

enables

ISO
IEA
IBA
IMP
IDA

(PMID:12060739)
(PMID:29579307)

GO_Central
InterPro
UniProt
Ensembl
RHEA
CAFA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr15:11,383,749...11,399,744
Ensembl chr15:11,382,387...11,399,751

Tars2

threonyl-tRNA synthetase 2, mitochondrial (putative)

enables

ISO
IEA
IBA
ISS

GO_Central
InterPro
UniProt
Ensembl
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr 3:95,647,286...95,663,677
Ensembl chr 3:95,647,288...95,667,518

Tars3

threonyl-tRNA synthetase 3

enables

IDA
IEA
IBA

(PMID:29579307)

UniProt
GO_Central
InterPro
RHEA

PMID:29579307

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000116 GO_REF:0000117

NCBI chr 7:65,294,610...65,341,841
Ensembl chr 7:65,294,646...65,341,839

tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Alkbh8

alkB homolog 8, tRNA methyltransferase

enables

IDA
IEA
IBA

(PMID:20583019)

MGI
RHEA
UniProt
GO_Central

PMID:20583019

GO_REF:0000003 GO_REF:0000033 GO_REF:0000116

NCBI chr 9:3,335,151...3,391,154
Ensembl chr 9:3,335,140...3,391,154

Trmt9b

tRNA methyltransferase 9B

enables

IBA

GO_REF:0000033

NCBI chr 8:36,924,643...36,981,738
Ensembl chr 8:36,924,702...36,983,724

tRNA (adenine(58)-N1)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt61a

tRNA methyltransferase 61A

enables

IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000116

NCBI chr12:111,644,539...111,650,336
Ensembl chr12:111,644,539...111,650,336

tRNA (adenine(9)-N1)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt10c

tRNA methyltransferase 10C, mitochondrial RNase P subunit

enables

IEA

RHEA
Ensembl
UniProt

GO_REF:0000003 GO_REF:0000107 GO_REF:0000116

NCBI chr16:55,854,083...55,858,149
Ensembl chr16:55,852,972...55,858,182

tRNA (cytidine) methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl2

methyltransferase 2, methylcytidine

enables

ISO
ISS

GO_REF:0000024 GO_REF:0000119

NCBI chr11:105,017,251...105,031,972
Ensembl chr11:105,017,251...105,031,220

tRNA (cytidine-3-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl2

methyltransferase 2, methylcytidine

enables

IMP
IBA
ISO

(PMID:28655767)

MGI
UniProt
Ensembl
GO_Central

PMID:28655767

GO_REF:0000033 GO_REF:0000119

NCBI chr11:105,017,251...105,031,972
Ensembl chr11:105,017,251...105,031,220

Mettl6

methyltransferase 6, methylcytidine

enables

IMP
IEA
ISO

(PMID:28655767)

PMID:28655767

GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr14:31,180,775...31,217,007
Ensembl chr14:31,195,535...31,216,997

Mettl8

methyltransferase 8, methylcytidine

enables

ISS
ISO

UniProt
GO_Central
Ensembl
InterPro

GO_REF:0000024 GO_REF:0000119

NCBI chr 2:70,794,902...70,886,729
Ensembl chr 2:70,794,905...70,885,927

tRNA (cytidine-5-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Nsun2

NOL1/NOP2/Sun domain family member 2

enables

IMP
IBA
IEA
IDA
ISO

(PMID:22885326)
(PMID:23871666), (PMID:31276587), (PMID:31287866)

PMID:22885326 PMID:23871666 PMID:31276587 PMID:31287866

GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr13:69,760,135...69,783,899
Ensembl chr13:69,681,865...69,783,899

Nsun3

NOL1/NOP2/Sun domain family member 3

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr16:62,552,807...62,607,238
Ensembl chr16:62,552,807...62,607,181

NOL1/NOP2/Sun domain family, member 4

enables

IBA

GO_REF:0000033

NCBI chr 4:115,890,202...115,911,076
Ensembl chr 4:115,890,039...115,911,073

Nsun6

NOL1/NOP2/Sun domain family member 6

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 2:14,995,255...15,059,683
Ensembl chr 2:14,999,942...15,059,880

Trdmt1

tRNA aspartic acid methyltransferase 1

enables

ISO
IEA
IMP

(PMID:22885326), (PMID:26271101)

PMID:22885326 PMID:26271101

GO_REF:0000107 GO_REF:0000119

NCBI chr 2:13,509,690...13,549,475
Ensembl chr 2:13,513,825...13,549,479

tRNA (guanine(10)-N2)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt11

tRNA methyltransferase 11

enables

ISS
ISO
IEA

UniProt
GO_Central
InterPro
RHEA

GO_REF:0000002 GO_REF:0000024 GO_REF:0000116 GO_REF:0000119

NCBI chr10:30,410,218...30,477,598
Ensembl chr10:30,410,221...30,476,745

tRNA (guanine(18)-2'-O)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tarbp1

TAR RNA binding protein 1

enables

ISO

GO_REF:0000119

NCBI chr 8:127,152,053...127,201,837
Ensembl chr 8:127,152,068...127,201,804

tRNA (guanine(26)-N2)-dimethyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt1

tRNA methyltransferase 1

enables

IEA
ISS
ISO

RHEA
UniProt
GO_Central

GO_REF:0000003 GO_REF:0000024 GO_REF:0000116 GO_REF:0000119

NCBI chr 8:85,412,953...85,426,437
Ensembl chr 8:85,412,936...85,426,437

tRNA (guanine(27)-N2)-dimethyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt1l

tRNA methyltransferase 1 like

enables

ISO
ISS

GO_REF:0000024 GO_REF:0000119

NCBI chr 1:151,304,293...151,333,934
Ensembl chr 1:151,304,293...151,333,912

tRNA (guanine(37)-N1)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt5

TRM5 tRNA methyltransferase 5

enables

IEA

UniProt
GO_Central
InterPro
RHEA
Ensembl

GO_REF:0000002 GO_REF:0000003 GO_REF:0000104 GO_REF:0000116

NCBI chr12:73,315,289...73,333,754
Ensembl chr12:73,326,785...73,333,484

tRNA (guanine(46)-N7)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl1

methyltransferase 1, tRNA methylguanosine

enables

ISS
IBA
IEA
ISO

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr10:126,877,287...126,882,234
Ensembl chr10:126,877,283...126,882,234

tRNA (guanine(6)-N2)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Thumpd3

THUMP domain containing 3

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 6:113,023,292...113,045,239
Ensembl chr 6:113,023,186...113,045,234

tRNA (guanine(7)-N2)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Thumpd3

THUMP domain containing 3

enables

ISO
IEA

GO_REF:0000107 GO_REF:0000119

NCBI chr 6:113,023,292...113,045,239
Ensembl chr 6:113,023,186...113,045,234

tRNA (guanine) methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

FtsJ RNA 2'-O-methyltransferase 1

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr X:8,104,907...8,118,609
Ensembl chr X:8,104,907...8,118,645

Tarbp1

TAR RNA binding protein 1

enables

IBA

GO_REF:0000033

NCBI chr 8:127,152,053...127,201,837
Ensembl chr 8:127,152,068...127,201,804

Thumpd2

THUMP domain containing 2

enables

IBA

GO_REF:0000033

NCBI chr17:81,331,676...81,372,542
Ensembl chr17:81,333,761...81,372,511

Thumpd3

THUMP domain containing 3

enables

IBA

GO_REF:0000033

NCBI chr 6:113,023,292...113,045,239
Ensembl chr 6:113,023,186...113,045,234

Trmt1

tRNA methyltransferase 1

enables

IEA

GO_REF:0000002

NCBI chr 8:85,412,953...85,426,437
Ensembl chr 8:85,412,936...85,426,437

Trmt1l

tRNA methyltransferase 1 like

enables

IEA

GO_REF:0000002

NCBI chr 1:151,304,293...151,333,934
Ensembl chr 1:151,304,293...151,333,912

tRNA (guanosine(34)-2'-O)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

FtsJ RNA 2'-O-methyltransferase 1

enables

ISO
IEA
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr X:8,104,907...8,118,609
Ensembl chr X:8,104,907...8,118,645

tRNA (guanosine(9)-N1)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt10a

tRNA methyltransferase 10A

enables

ISO
IEA

GO_Central
UniProt
RHEA

GO_REF:0000003 GO_REF:0000116 GO_REF:0000119

NCBI chr 3:137,849,214...137,865,582
Ensembl chr 3:137,849,209...137,865,582

Trmt10b

tRNA methyltransferase 10B

enables

IEA

RHEA
Ensembl
UniProt

GO_REF:0000003 GO_REF:0000107 GO_REF:0000116

NCBI chr 4:45,297,158...45,316,181
Ensembl chr 4:45,297,127...45,316,131

Trmt10c

tRNA methyltransferase 10C, mitochondrial RNase P subunit

enables

IEA

UniProt
Ensembl
RHEA

GO_REF:0000003 GO_REF:0000107 GO_REF:0000116

NCBI chr16:55,854,083...55,858,149
Ensembl chr16:55,852,972...55,858,182

tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmo

tRNA methyltransferase O

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 4:46,376,505...46,393,557
Ensembl chr 4:46,376,505...46,389,437

tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cdkal1

CDK5 regulatory subunit associated protein 1-like 1

enables

IMP
IEA
IBA

(PMID:21841312)

MGI
InterPro
GO_Central
RHEA
UniProt

PMID:21841312

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000116

NCBI chr13:29,375,729...30,039,665
Ensembl chr13:29,375,729...30,039,657

tRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt2a

TRM2 tRNA methyltransferase 2A

enables

ISO
IEA
ISS

UniProt
RHEA
Ensembl
InterPro
GO_Central

GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr16:18,066,747...18,072,636
Ensembl chr16:18,066,543...18,072,636

Trmt2b

TRM2 tRNA methyltransferase 2B

enables

IDA
IEA
ISO

(PMID:31736397)

PMID:31736397

GO_REF:0000002 GO_REF:0000003 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr X:133,123,704...133,177,770
Ensembl chr X:133,123,088...133,177,733

tRNA (uridine) methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Alkbh8

alkB homolog 8, tRNA methyltransferase

enables

ISO
IEA
IMP
ISS

(PMID:20123966)

PMID:20123966

GO_REF:0000024 GO_REF:0000107 GO_REF:0000117 GO_REF:0000119

NCBI chr 9:3,335,151...3,391,154
Ensembl chr 9:3,335,140...3,391,154

Trmt44

tRNA methyltransferase 44

enables

IBA

GO_REF:0000033

NCBI chr 5:35,713,552...35,732,424
Ensembl chr 5:35,713,547...35,732,414

tRNA 2'-O-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

FtsJ RNA 2'-O-methyltransferase 1

enables

ISO

GO_REF:0000119

NCBI chr X:8,104,907...8,118,609
Ensembl chr X:8,104,907...8,118,645

Trmt13

tRNA methyltransferase 13

enables

IEA

GO_REF:0000002

NCBI chr 3:116,365,706...116,408,236
Ensembl chr 3:116,374,742...116,408,236

tRNA 2'-phosphotransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trpt1

tRNA phosphotransferase 1

enables

IDA
IEA
IBA

(PMID:9826666)

MGI
UniProt
GO_Central
RHEA

PMID:9826666

GO_REF:0000003 GO_REF:0000033 GO_REF:0000116 GO_REF:0000117

NCBI chr19:6,970,046...6,977,689
Ensembl chr19:6,973,499...6,976,414

tRNA 4-demethylwyosine alpha-amino-alpha-carboxypropyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt12

tRNA methyltransferase 12

enables

IEA

GO_REF:0000003 GO_REF:0000116

NCBI chr15:58,744,498...58,748,630
Ensembl chr15:58,744,523...58,748,976

tRNA 5-taurinomethyluridine synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gtpbp3

GTP binding protein 3

enables

ISS
ISO
IEA

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:71,938,788...71,952,268
Ensembl chr 8:71,940,747...71,952,227

Mto1

mitochondrial tRNA translation optimization 1

enables

ISS
ISO

GO_REF:0000024 GO_REF:0000119

NCBI chr 9:78,355,372...78,381,447
Ensembl chr 9:78,355,490...78,382,630

tRNA cytidine N4-acetyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Nat10

N-acetyltransferase 10

enables

IEA
IBA

RHEA
GO_Central

GO_REF:0000033 GO_REF:0000116

NCBI chr 2:103,551,603...103,593,292
Ensembl chr 2:103,551,601...103,591,615

tRNA demethylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Alkbh1

alkB homolog 1, histone H2A dioxygenase

enables

ISO
ISS
IEA

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr12:87,474,847...87,490,609
Ensembl chr12:87,472,610...87,490,787

Fto

FTO alpha-ketoglutarate dependent dioxygenase

enables

ISS
ISO
IEA

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:92,039,995...92,395,061
Ensembl chr 8:92,040,153...92,395,067

tRNA dihydrouridine synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dus1l

dihydrouridine synthase 1 like

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000033

NCBI chr11:120,678,385...120,687,254
Ensembl chr11:120,680,027...120,687,229

Dus2

dihydrouridine synthase 2

enables

ISO
IBA
IEA
ISS

GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:106,738,110...106,780,472
Ensembl chr 8:106,717,969...106,780,472

Dus3l

dihydrouridine synthase 3 like

enables

IBA
IEA

GO_REF:0000002 GO_REF:0000033

NCBI chr17:57,069,224...57,077,093
Ensembl chr17:57,071,757...57,077,093

Dus4l

dihydrouridine synthase 4 like

enables

IBA
IEA

UniProt
GO_Central
InterPro
Ensembl
RHEA

GO_REF:0000002 GO_REF:0000033

NCBI chr12:31,690,049...31,704,834
Ensembl chr12:31,690,049...31,704,825

tRNA dimethylallyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trit1

tRNA isopentenyltransferase 1

enables

IDA
IEA
IBA
ISO

(PMID:23289710)

PMID:23289710

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr 4:122,910,342...122,948,742
Ensembl chr 4:122,910,390...122,948,742

tRNA guanylyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Thg1l

tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)

enables

ISS
IBA
IEA
ISO

UniProt
GO_Central
Ensembl
RHEA
InterPro

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr11:45,836,132...45,846,330
Ensembl chr11:45,837,670...45,846,321

tRNA methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bcdin3d

BCDIN3 domain containing

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr15:99,367,965...99,372,611
Ensembl chr15:99,367,960...99,372,611

InterPro
GO_Central
UniProt

FtsJ RNA 2'-O-methyltransferase 1

enables

IEA
IBA

GO_REF:0000002 GO_REF:0000033 GO_REF:0000104

NCBI chr X:8,104,907...8,118,609
Ensembl chr X:8,104,907...8,118,645

Lcmt2

leucine carboxyl methyltransferase 2

enables

IBA

GO_REF:0000033

NCBI chr 2:120,967,773...120,971,179
Ensembl chr 2:120,958,788...120,971,134

Trdmt1

tRNA aspartic acid methyltransferase 1

enables

IMP
IEA
ISO

(PMID:16424344)

MGI
Ensembl

PMID:16424344

GO_REF:0000107

NCBI chr 2:13,509,690...13,549,475
Ensembl chr 2:13,513,825...13,549,479

Trmt12

tRNA methyltransferase 12

enables

IBA

GO_REF:0000033

NCBI chr15:58,744,498...58,748,630
Ensembl chr15:58,744,523...58,748,976

Trmt13

tRNA methyltransferase 13

enables

IBA

GO_REF:0000033

NCBI chr 3:116,365,706...116,408,236
Ensembl chr 3:116,374,742...116,408,236

Trmt5

TRM5 tRNA methyltransferase 5

enables

IBA

GO_REF:0000033

NCBI chr12:73,315,289...73,333,754
Ensembl chr12:73,326,785...73,333,484

Trmt9b

tRNA methyltransferase 9B

enables

IEA
ISO

GO_REF:0000117 GO_REF:0000119

NCBI chr 8:36,924,643...36,981,738
Ensembl chr 8:36,924,702...36,983,724

Tyw3

tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)

enables

IBA

GO_REF:0000033

NCBI chr 3:154,282,157...154,302,750
Ensembl chr 3:154,282,068...154,302,741

tRNA pseudouridine synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pus1

pseudouridine synthase 1

enables

IDA
IEA

(PMID:10094309)

PMID:10094309

GO_REF:0000116

NCBI chr 5:110,921,533...110,928,523
Ensembl chr 5:110,921,533...110,928,525

Pus10

pseudouridylate synthase 10

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr11:23,608,588...23,682,876
Ensembl chr11:23,615,674...23,682,876

Pus7

pseudouridylate synthase 7

enables

IEA

GO_REF:0000116

NCBI chr 5:23,945,163...23,988,709
Ensembl chr 5:23,945,646...23,988,709

Pusl1

pseudouridylate synthase-like 1

enables

IEA

GO_REF:0000116

NCBI chr 4:155,973,314...155,976,231
Ensembl chr 4:155,972,336...155,976,238

Rpusd4

RNA pseudouridylate synthase domain containing 4

enables

IEA

GO_REF:0000116

NCBI chr 9:35,179,177...35,187,253
Ensembl chr 9:35,179,161...35,189,027

Trub1

TruB pseudouridine (psi) synthase family member 1

enables

IEA

GO_REF:0000116

NCBI chr19:57,441,323...57,479,437
Ensembl chr19:57,441,344...57,479,437

tRNA pseudouridine(13) synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pus7

pseudouridylate synthase 7

enables

ISO
IEA

GO_Central
Ensembl
RHEA

GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 5:23,945,163...23,988,709
Ensembl chr 5:23,945,646...23,988,709

tRNA pseudouridine(38-40) synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pus1

pseudouridine synthase 1

enables

IEA

RHEA
Ensembl
UniProt
GO_Central

GO_REF:0000003 GO_REF:0000116

NCBI chr 5:110,921,533...110,928,523
Ensembl chr 5:110,921,533...110,928,525

tRNA pseudouridine(38/39) synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pus3

pseudouridine synthase 3

enables

IEA
ISO

GO_REF:0000003 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 9:35,469,856...35,478,697
Ensembl chr 9:35,469,891...35,478,697

tRNA pseudouridine(55) synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Pus10

pseudouridylate synthase 10

enables

IEA
ISO

RHEA
GO_Central
UniProt

GO_REF:0000003 GO_REF:0000116 GO_REF:0000119

NCBI chr11:23,608,588...23,682,876
Ensembl chr11:23,615,674...23,682,876

Trub1

TruB pseudouridine (psi) synthase family member 1

enables

IEA
ISO

RHEA
GO_Central

GO_REF:0000116 GO_REF:0000119

NCBI chr19:57,441,323...57,479,437
Ensembl chr19:57,441,344...57,479,437

Trub2

TruB pseudouridine (psi) synthase family member 2

enables

IEA
ISO

RHEA
GO_Central

GO_REF:0000116 GO_REF:0000119

NCBI chr 2:29,651,235...29,677,697
Ensembl chr 2:29,651,236...29,678,514

tRNA uridine(34) acetyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Elp3

elongator acetyltransferase complex subunit 3

enables

ISS
IEA

GO_REF:0000024 GO_REF:0000116

NCBI chr14:65,767,895...65,830,561
Ensembl chr14:65,767,898...65,830,524

tRNA(Phe) (7-(3-amino-3-carboxypropyl)wyosine37-C2)-hydroxylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tyw5

tRNA-yW synthesizing protein 5

enables

IBA
IEA
ISO
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 1:57,427,394...57,445,833
Ensembl chr 1:57,427,396...57,446,260

tRNA(Ser) (uridine(44)-2'-O-)-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmt44

tRNA methyltransferase 44

enables

IEA

GO_REF:0000003 GO_REF:0000116

NCBI chr 5:35,713,552...35,732,424
Ensembl chr 5:35,713,547...35,732,414

tRNA-2-methylthio-N(6)-dimethylallyladenosine(37) synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cdk5rap1

CDK5 regulatory subunit associated protein 1

enables

IMP
IEA
ISO
IBA

(PMID:25738458)

MGI
RHEA
Ensembl
GO_Central
UniProt

PMID:25738458

GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 2:154,063,931...154,216,170
Ensembl chr 2:154,177,300...154,214,930

tRNA-4-demethylwyosine synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tyw1

tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)

enables

IEA

GO_REF:0000003 GO_REF:0000116

NCBI chr 5:130,284,460...130,370,408
Ensembl chr 5:130,284,460...130,370,404

tRNA-5-taurinomethyluridine 2-sulfurtransferase

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Trmu

tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase

enables

IEA

GO_REF:0000003 GO_REF:0000116

NCBI chr15:85,763,505...85,781,595
Ensembl chr15:85,763,513...85,781,595

tRNA-dihydrouridine16 synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dus1l

dihydrouridine synthase 1 like

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr11:120,678,385...120,687,254
Ensembl chr11:120,680,027...120,687,229

tRNA-dihydrouridine17 synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dus1l

dihydrouridine synthase 1 like

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr11:120,678,385...120,687,254
Ensembl chr11:120,680,027...120,687,229

tRNA-dihydrouridine20 synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dus2

dihydrouridine synthase 2

enables

ISS
ISO
IEA

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:106,738,110...106,780,472
Ensembl chr 8:106,717,969...106,780,472

tRNA-dihydrouridine20a synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dus4l

dihydrouridine synthase 4 like

enables

IEA

GO_REF:0000116

NCBI chr12:31,690,049...31,704,834
Ensembl chr12:31,690,049...31,704,825

tRNA-dihydrouridine20b synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dus4l

dihydrouridine synthase 4 like

enables

IEA

GO_REF:0000116

NCBI chr12:31,690,049...31,704,834
Ensembl chr12:31,690,049...31,704,825

tRNA-dihydrouridine47 synthase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dus3l

dihydrouridine synthase 3 like

enables

ISS
IEA
ISO

UniProt
Ensembl
RHEA
InterPro
GO_Central

GO_REF:0000024 GO_REF:0000117 GO_REF:0000119

NCBI chr17:57,069,224...57,077,093
Ensembl chr17:57,071,757...57,077,093

tRNA-guanosine(34) queuine transglycosylase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Qtrt1

queuine tRNA-ribosyltransferase catalytic subunit 1

enables

IDA
IEA
IBA
ISO

(PMID:19414587), (PMID:35815944)

PMID:19414587 PMID:35815944

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000104 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr 9:21,323,096...21,331,575
Ensembl chr 9:21,323,133...21,331,570

Qtrt2

queuine tRNA-ribosyltransferase accessory subunit 2

enables

IEA

GO_REF:0000002 GO_REF:0000104

NCBI chr16:43,681,879...43,710,063
Ensembl chr16:43,681,770...43,747,172

tRNA-intron lyase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tsen2

tRNA splicing endonuclease subunit 2

enables

IBA
IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr 6:115,521,652...115,555,297
Ensembl chr 6:115,521,625...115,555,589

Tsen34

tRNA splicing endonuclease subunit 34

enables

IBA
IEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033

NCBI chr 7:3,696,300...3,704,033
Ensembl chr 7:3,695,862...3,704,023

tRNA-queuosine(34) beta-mannosyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gtdc1

glycosyltransferase-like domain containing 1

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000096 GO_REF:0000107 GO_REF:0000119

NCBI chr 2:44,454,420...44,817,761
Ensembl chr 2:44,454,424...44,817,669

tRNA-queuosine(34) galactosyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

B3gntl1

UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000096 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr11:121,507,023...121,563,985
Ensembl chr11:121,507,023...121,563,979

tRNA-specific adenosine deaminase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adad1

adenosine deaminase domain containing 1

enables

IBA

GO_REF:0000033

NCBI chr 3:37,117,805...37,165,661
Ensembl chr 3:37,117,676...37,176,079

Adad2

adenosine deaminase domain containing 2

enables

IBA

GO_REF:0000033

NCBI chr 8:120,339,449...120,343,665
Ensembl chr 8:120,339,486...120,343,663

Adar

adenosine deaminase, RNA-specific

enables

IBA

GO_REF:0000033

NCBI chr 3:89,622,321...89,660,756
Ensembl chr 3:89,622,329...89,660,753

Adarb1

adenosine deaminase, RNA-specific, B1

enables

IBA

GO_REF:0000033

NCBI chr10:77,126,561...77,254,125
Ensembl chr10:77,126,560...77,254,104

Adarb2

adenosine deaminase, RNA-specific, B2

enables

IBA

GO_Central
Ensembl
UniProt
MGI

GO_REF:0000033

NCBI chr13:8,252,475...8,818,798
Ensembl chr13:8,252,902...8,818,783

Adat1

adenosine deaminase, tRNA-specific 1

enables

IBA
IEA
ISO
ISS

(PMID:10675613)

PMID:10675613

GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 8:112,685,552...112,718,938
Ensembl chr 8:112,693,540...112,718,934

Adat2

adenosine deaminase, tRNA-specific 2

enables

IEA

GO_REF:0000002

NCBI chr10:13,428,651...13,439,120
Ensembl chr10:13,428,638...13,439,120

tRNA-specific adenosine-34 deaminase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adat2

adenosine deaminase, tRNA-specific 2

enables

IBA
IEA

GO_Central
UniProt
RHEA

GO_REF:0000003 GO_REF:0000033 GO_REF:0000116

NCBI chr10:13,428,651...13,439,120
Ensembl chr10:13,428,638...13,439,120

tRNA-specific adenosine-37 deaminase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adat1

adenosine deaminase, tRNA-specific 1

enables

IEA

GO_REF:0000003 GO_REF:0000116

NCBI chr 8:112,685,552...112,718,938
Ensembl chr 8:112,693,540...112,718,934

tRNA-specific ribonuclease activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ang

angiogenin, ribonuclease, RNase A family, 5

enables

IDA
ISO

(PMID:24752898), (PMID:33986151)

PMID:24752898 PMID:33986151

GO_REF:0000119

NCBI chr14:51,328,607...51,339,462
Ensembl chr14:51,328,607...51,339,466

Ang2

angiogenin, ribonuclease A family, member 2

enables

ISO

GO_REF:0000119

NCBI chr14:51,432,781...51,436,400
Ensembl chr14:51,432,781...51,436,605

Ang3

angiogenin, ribonuclease A family, member 3

enables

ISO

GO_REF:0000119

Ang4

angiogenin, ribonuclease A family, member 4

enables

ISO

GO_REF:0000119

NCBI chr14:52,001,349...52,011,047
Ensembl chr14:52,001,335...52,011,047

Ang5

angiogenin, ribonuclease A family, member 5

enables

ISO

GO_REF:0000119

NCBI chr14:44,194,526...44,200,537
Ensembl chr14:44,194,526...44,200,537

Ang6

angiogenin, ribonuclease A family, member 6

enables

ISO

GO_REF:0000119

NCBI chr14:44,239,121...44,248,945
Ensembl chr14:44,239,121...44,243,875

Elac1

elaC ribonuclease Z 1

enables

ISO
IEA
ISS

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr18:73,868,109...73,887,589
Ensembl chr18:73,868,109...73,887,550

Elac2

elaC ribonuclease Z 2

enables

ISO

GO_REF:0000119

NCBI chr11:64,869,856...64,892,906
Ensembl chr11:64,869,864...64,892,895

tRNA-uridine aminocarboxypropyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dtwd1

DTW domain containing 1

enables

IBA
IEA
ISO
ISS

GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000119

NCBI chr 2:125,993,981...126,007,197
Ensembl chr 2:125,994,061...126,007,199

Dtwd2

DTW domain containing 2

enables

ISO
IEA
ISS

PMID:12060739 PMID:19941862

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr18:49,829,212...49,890,255
Ensembl chr18:49,829,212...49,888,668

tryptophan-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Wars1

tryptophanyl-tRNA synthetase1

enables

IDA
IEA
IBA
ISO
ISS
IMP

(PMID:19941862)
(PMID:12060739)

MGI
RHEA
InterPro
UniProt
GO_Central
Ensembl
CAFA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000117 GO_REF:0000119

NCBI chr12:108,825,956...108,860,095
Ensembl chr12:108,825,956...108,860,100

Wars2

tryptophanyl tRNA synthetase 2 (mitochondrial)

enables

ISS
IEA
IBA
ISO

UniProt
InterPro
RHEA
GO_Central
Ensembl

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 3:99,047,423...99,128,546
Ensembl chr 3:99,048,384...99,146,502

tyrosine-tRNA ligase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Yars1

tyrosyl-tRNA synthetase 1

enables

ISS
IEA
IBA
ISO

UniProt
RHEA
Ensembl
InterPro
GO_Central

GO_REF:0000002 GO_REF:0000003 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr 4:129,083,595...129,113,033
Ensembl chr 4:129,083,553...129,113,400

Yars2

tyrosyl-tRNA synthetase 2 (mitochondrial)

enables

IEA
IBA
ISO

UniProt
InterPro
Ensembl
GO_Central
RHEA

GO_REF:0000002 GO_REF:0000003 GO_REF:0000033 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr16:16,120,829...16,127,504
Ensembl chr16:16,120,829...16,127,504

tyrosyl-RNA phosphodiesterase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Tdp2

tyrosyl-DNA phosphodiesterase 2

enables

IEA
ISO

GO_REF:0000107 GO_REF:0000119

NCBI chr13:25,015,642...25,026,136
Ensembl chr13:25,015,662...25,026,136

U2 snRNA 2'-O-methyladenosine m6 methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl4

methyltransferase 4, N6-adenosine

enables

IEA

GO_REF:0000116

NCBI chr17:95,030,018...95,057,579
Ensembl chr17:95,030,018...95,057,447

U6 snRNA (adenine-(43)-N(6))-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mettl16

methyltransferase 16, N6-methyladenosine

enables

ISS
IEA
ISO

GO_REF:0000003 GO_REF:0000024 GO_REF:0000107 GO_REF:0000116 GO_REF:0000119

NCBI chr11:74,661,658...74,716,649
Ensembl chr11:74,661,656...74,719,351

U6 snRNA (guanine-N(2))-methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Thumpd2

THUMP domain containing 2

enables

ISS
IEA
ISO

GO_REF:0000024 GO_REF:0000107 GO_REF:0000119

NCBI chr17:81,331,676...81,372,542
Ensembl chr17:81,333,761...81,372,511

U6 snRNA 2'-O-ribose methyltransferase activity

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Fbl

fibrillarin

enables

IEA