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ONTOLOGY REPORT - ANNOTATIONS


Term:neuron projection arborization
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Accession:GO:0140058 term browser browse the term
Definition:The process in which the anatomical structures of a neuron projection are generated and organized into branches. A neuron projection is any process extending from a neural cell, such as axons or dendrites.
Synonyms:exact_synonym: neurite arborization;   neurite branching;   neuron projection branching
 related_synonym: branching morphogenesis of a neurite;   branching morphogenesis of a neuron projection


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neuron projection arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp2 LDL receptor related protein 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4949595|PMID:20637285)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20637285 GO_REF:0000024 GO_REF:0000107 MGI:4949595 NCBI chr 3:55,665,153...55,822,484
Ensembl chr 3:55,665,145...55,822,551
JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 IMP RGD PMID:17114044 RGD:8693357 NCBI chr 7:132,857,311...133,018,549
Ensembl chr 7:132,857,628...133,018,584
JBrowse link
G Nlgn1 neuroligin 1 involved_in IGI PMID:22750515 ARUK-UCL PMID:22750515 RGD:13210562 NCBI chr 2:111,057,291...111,973,681
Ensembl chr 2:111,057,291...111,793,326
JBrowse link
G Pak6 p21 (RAC1) activated kinase 6 acts_upstream_of_or_within ISO (MGI:6270117|PMID:29117290) RGD PMID:29117290 MGI:6270117 NCBI chr 3:110,442,175...110,486,317
Ensembl chr 3:110,442,637...110,487,526
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in ISO
IEA
UniProtKB:O60890 (PMID:27160703)
GO_REF:0000107
RGD
Ensembl
PMID:27160703 GO_REF:0000107 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
basal dendrite arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 involved_in ISO UniProtKB:O08665 (MGI:5462161|PMID:22683681) RGD PMID:22683681 MGI:5462161 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858
JBrowse link
G Sema3a semaphorin 3A involved_in ISO UniProtKB:P97333 (MGI:5462161|PMID:22683681) RGD PMID:22683681 MGI:5462161 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035
JBrowse link
G Taok2 TAO kinase 2 involved_in IEA
IGI
ISO
GO_REF:0000107
PMID:22683681
(MGI:5462161|PMID:22683681)
Ensembl
RGD
PMID:22683681, PMID:22683681 GO_REF:0000107 MGI:5462161, RGD:13461760 NCBI chr 1:198,301,789...198,354,601
Ensembl chr 1:198,301,938...198,320,075
JBrowse link
dendrite arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor IMP RGD PMID:22948147 RGD:13838731 NCBI chr 1:53,713,873...53,861,918
Ensembl chr 1:53,715,693...53,802,658
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit involved_in IEA
ISO
GO_REF:0000107
(MGI:5487905|PMID:23270857)
Ensembl
RGD
PMID:23270857 GO_REF:0000107 MGI:5487905 NCBI chr 1:123,897,341...124,039,263
Ensembl chr 1:123,899,657...124,039,196
JBrowse link
G Igf2bp1 insulin-like growth factor 2 mRNA binding protein 1 IMP RGD PMID:21471362 RGD:40902868 NCBI chr10:83,774,178...83,823,323
Ensembl chr10:83,780,203...83,822,996
JBrowse link
G Phactr1 phosphatase and actin regulator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6316857|PMID:30256902)
UniProt
RGD
PMID:30256902 GO_REF:0000024 MGI:6316857 NCBI chr17:23,245,423...23,761,207 JBrowse link
G Ptn pleiotrophin involved_in ISS
ISO
GO_REF:0000024
(MGI:6269048|PMID:30497772)
UniProt
RGD
PMID:30497772 GO_REF:0000024 MGI:6269048 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Tpbg trophoblast glycoprotein acts_upstream_of_or_within ISO MGI:4459319 (MGI:5311037|PMID:22323733), (MGI:5790502|PMID:27488640) RGD PMID:22323733 PMID:27488640 MGI:5311037 MGI:5790502 NCBI chr 8:93,491,761...93,495,132
Ensembl chr 8:93,491,761...93,495,130
JBrowse link
G Zfp365 zinc finger protein 365 involved_in ISS
ISO
GO_REF:0000024
(MGI:5908530|PMID:25983680)
UniProt
RGD
PMID:25983680 GO_REF:0000024 MGI:5908530 NCBI chr20:22,060,160...22,083,766
Ensembl chr20:22,060,224...22,086,108
JBrowse link
negative regulation of neuron projection arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Spry3 sprouty RTK signaling antagonist 3 involved_in ISO (MGI:5693300|PMID:26089202) RGD PMID:26089202 MGI:5693300 NCBI chr12:18,930,087...18,940,622
Ensembl chr12:18,931,477...18,940,614
JBrowse link
positive regulation of neuron projection arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlg4 discs large MAGUK scaffold protein 4 involved_in IGI PMID:25424568 ARUK-UCL PMID:25424568 RGD:11060597 NCBI chr10:56,625,845...56,655,543
Ensembl chr10:56,627,411...56,653,599
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in IGI PMID:25424568 ARUK-UCL PMID:25424568 RGD:11060597 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Dvl2 dishevelled segment polarity protein 2 involved_in IGI PMID:25424568 ARUK-UCL PMID:25424568 RGD:11060597 NCBI chr10:56,609,810...56,619,269
Ensembl chr10:56,610,051...56,619,269
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 involved_in IGI PMID:25424568 ARUK-UCL PMID:25424568 RGD:11060597 NCBI chr11:84,051,177...84,068,479
Ensembl chr11:84,051,078...84,068,302
JBrowse link
G Fzd4 frizzled class receptor 4 involved_in IGI
ISO
PMID:25424568
UniProtKB:Q9QZH0 (MGI:6114830|PMID:25424568)
RGD PMID:25424568, PMID:25424568 MGI:6114830, RGD:11060597 NCBI chr 1:153,589,471...153,598,376
Ensembl chr 1:153,589,471...153,598,375
JBrowse link
G Grip1 glutamate receptor interacting protein 1 involved_in IGI PMID:25424568 ARUK-UCL PMID:25424568 RGD:11060597 NCBI chr 7:64,672,723...64,854,939
Ensembl chr 7:64,672,722...64,864,404
JBrowse link
G Map3k13 mitogen-activated protein kinase kinase kinase 13 involved_in ISO (MGI:5810221|PMID:27511108) RGD PMID:27511108 MGI:5810221 NCBI chr11:82,744,391...82,938,357
Ensembl chr11:82,745,735...82,938,357
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO
IGI
GO_REF:0000107
UniProtKB:Q9QXQ7 (MGI:6114830|PMID:25424568)
Ensembl
RGD
PMID:25424568, PMID:25424568 GO_REF:0000107 MGI:6114830, RGD:11060597 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
regulation of neuron projection arborization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Macf1 microtubule-actin crosslinking factor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6316533|PMID:26526844)
UniProt
RGD
PMID:26526844 GO_REF:0000024 MGI:6316533 NCBI chr 5:141,039,455...141,363,524
Ensembl chr 5:141,039,468...141,363,524
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A acts_upstream_of ISO (MGI:6196220|PMID:30074985) RGD PMID:30074985 MGI:6196220 NCBI chr 5:140,642,865...140,657,759
Ensembl chr 5:140,642,885...140,657,745
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (MGI:6099622|PMID:28662698) RGD PMID:28662698 MGI:6099622 NCBI chr 2:207,277,088...207,301,245
Ensembl chr 2:207,278,161...207,300,854
JBrowse link
G Myo9a myosin IXA involved_in ISS
ISO
GO_REF:0000024
(MGI:6294204|PMID:27259756)
UniProt
RGD
PMID:27259756 GO_REF:0000024 MGI:6294204 NCBI chr 8:64,573,248...64,777,607
Ensembl chr 8:64,573,358...64,777,543
JBrowse link
G Ntng1 netrin G1 involved_in ISO (MGI:6415477|PMID:31692205) RGD PMID:31692205 MGI:6415477 NCBI chr 2:212,695,464...213,073,046
Ensembl chr 2:212,696,624...212,852,870
JBrowse link
G Ntng2 netrin G2 involved_in ISO (MGI:6415477|PMID:31692205) RGD PMID:31692205 MGI:6415477 NCBI chr 3:7,742,511...7,800,834
Ensembl chr 3:7,742,531...7,796,385
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19634
    developmental process 6783
      anatomical structure development 6259
        cell development 2439
          neuron development 1325
            neuron projection development 1162
              neuron projection morphogenesis 718
                neuron projection arborization 30
                  axon arborization 0
                  dendrite arborization + 10
                  negative regulation of neuron projection arborization 1
                  positive regulation of neuron projection arborization 8
                  regulation of neuron projection arborization + 15
Path 2
Term Annotations click to browse term
  biological_process 19634
    developmental process 6783
      anatomical structure development 6259
        multicellular organism development 5741
          system development 5284
            nervous system development 2718
              neurogenesis 1937
                generation of neurons 1781
                  neuron differentiation 1615
                    neuron development 1325
                      neuron projection development 1162
                        neuron projection morphogenesis 718
                          neuron projection arborization 30
                            axon arborization 0
                            dendrite arborization + 10
                            negative regulation of neuron projection arborization 1
                            positive regulation of neuron projection arborization 8
                            regulation of neuron projection arborization + 15
paths to the root