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ONTOLOGY REPORT - ANNOTATIONS


Term:modification-dependent protein binding
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Accession:GO:0140030 term browser browse the term
Definition:Binding to a protein upon post-translation modification of the target protein.
Comment:This term should only be used when the binding is shown to require a post-translational modification: the interaction needs to be tested with and without the PTM. The binding does not need to be at the site of the modification. It may be that the PTM causes a conformational change that allows binding of the protein to another region; this type of modification-dependent protein binding is valid for annotation to this term.
Synonyms:related_synonym: modified protein binding



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modification-dependent protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hspd1 heat shock protein family D (Hsp60) member 1 IPI RGD PMID:9811814 RGD:2298706 NCBI chr 9:56,579,195...56,590,011
Ensembl chr 9:56,579,201...56,589,662
JBrowse link
G Mllt3 MLLT3, super elongation complex subunit enables ISO (PMID:27105114), (PMID:27545619) RGD PMID:27105114 PMID:27545619 NCBI chr 5:102,259,075...102,515,447
Ensembl chr 5:102,260,011...102,515,361
JBrowse link
G Yeats2 YEATS domain containing 2 enables ISO (PMID:27103431) RGD PMID:27103431 NCBI chr11:80,743,134...80,829,253
Ensembl chr11:80,743,134...80,829,208
JBrowse link
G Yeats4 YEATS domain containing 4 enables ISO (PMID:30071723) RGD PMID:30071723 NCBI chr 7:52,858,313...52,865,454
Ensembl chr 7:52,858,305...52,865,635
JBrowse link
H3K27me3 modified histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd5 chromodomain helicase DNA binding protein 5 enables ISS
ISO
IEA
GO_REF:0000024
(MGI:5532595|PMID:23948251)
GO_REF:0000107
(PMID:23948251)
UniProt
RGD
Ensembl
PMID:23948251 GO_REF:0000024 GO_REF:0000107 MGI:5532595 NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
JBrowse link
G Hdgfl2 HDGF like 2 enables ISO
ISS
(PMID:26721387)
GO_REF:0000024
RGD
UniProt
PMID:26721387 GO_REF:0000024 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 contributes_to ISO UniProtKB:Q15545 (PMID:24927529) RGD PMID:24927529 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 contributes_to ISO UniProtKB:P21675 (PMID:24927529) RGD PMID:24927529 NCBI chr18:29,459,937...29,462,086
Ensembl chr18:29,452,943...29,462,134
JBrowse link
H3K9me3 modified histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpf2 double PHD fingers 2 enables ISO (PMID:29429572) RGD PMID:29429572 NCBI chr 1:203,183,674...203,199,037
Ensembl chr 1:203,183,686...203,198,983
JBrowse link
G Hdgfl2 HDGF like 2 enables ISO (PMID:26721387) RGD PMID:26721387 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186
JBrowse link
H4K20me3 modified histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pwp1 PWP1 homolog, endonuclein enables ISO (MGI:5659778|PMID:25335925) RGD PMID:25335925 MGI:5659778 NCBI chr 7:17,982,730...17,998,728
Ensembl chr 7:17,982,235...17,998,731
JBrowse link
G Ttll12 tubulin tyrosine ligase like 12 enables ISO (PMID:23251473) RGD PMID:23251473 NCBI chr 7:114,731,890...114,751,237
Ensembl chr 7:114,731,892...114,751,356
JBrowse link
K11-linked polyubiquitin modification-dependent protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mindy2 MINDY lysine 48 deubiquitinase 2 enables ISO (PMID:28082312) RGD PMID:28082312 NCBI chr 8:71,268,274...71,327,698
Ensembl chr 8:71,256,447...71,328,453
JBrowse link
K48-linked polyubiquitin modification-dependent protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon enables ISO UniProtKB:Q9C030 (PMID:24882218)
(MGI:5645191|PMID:24882218)
RGD PMID:24882218 MGI:5645191 NCBI chr13:42,712,154...42,738,470
Ensembl chr13:42,712,159...42,737,143
JBrowse link
G Mindy1 MINDY lysine 48 deubiquitinase 1 enables ISS
ISO
GO_REF:0000024
(PMID:28082312)
UniProt
RGD
PMID:28082312 GO_REF:0000024 NCBI chr 2:182,859,977...182,873,000
Ensembl chr 2:182,860,472...182,873,015
JBrowse link
G Mindy2 MINDY lysine 48 deubiquitinase 2 enables ISO (PMID:28082312) RGD PMID:28082312 NCBI chr 8:71,268,274...71,327,698
Ensembl chr 8:71,256,447...71,328,453
JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor contributes_to IDA PMID:12847084 ParkinsonsUK-UCL PMID:12847084 RGD:10047330 NCBI chr10:105,654,395...105,709,958
Ensembl chr10:105,654,812...105,709,913
JBrowse link
G Rnf31 ring finger protein 31 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,083,047...29,095,328
Ensembl chr15:29,083,631...29,101,915
JBrowse link
G Ubqln4 ubiquilin 4 enables ISO (PMID:29666234) RGD PMID:29666234 NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059
JBrowse link
G Ubxn1 UBX domain protein 1 enables ISO (PMID:21135095) RGD PMID:21135095 NCBI chr 1:205,765,212...205,769,236
Ensembl chr 1:205,745,120...205,816,520
JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 enables ISO (MGI:5634892|PMID:12847084) RGD PMID:12847084 MGI:5634892 NCBI chr11:82,161,618...82,185,107
Ensembl chr11:82,161,619...82,185,087
JBrowse link
G Vcp valosin-containing protein enables ISO (MGI:5634892|PMID:12847084) RGD PMID:12847084 MGI:5634892 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Zfand2b zinc finger AN1-type containing 2B enables ISO (PMID:26876100)
(MGI:6154515|PMID:26876100)
RGD PMID:26876100 MGI:6154515 NCBI chr 9:76,665,466...76,668,447
Ensembl chr 9:76,665,546...76,668,445
JBrowse link
K6-linked polyubiquitin modification-dependent protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mindy2 MINDY lysine 48 deubiquitinase 2 enables ISO (PMID:28082312) RGD PMID:28082312 NCBI chr 8:71,268,274...71,327,698
Ensembl chr 8:71,256,447...71,328,453
JBrowse link
G Ubxn1 UBX domain protein 1 enables ISS
ISO
GO_REF:0000024
(PMID:20351172)
UniProt
RGD
PMID:20351172 GO_REF:0000024 NCBI chr 1:205,765,212...205,769,236
Ensembl chr 1:205,745,120...205,816,520
JBrowse link
K63-linked polyubiquitin modification-dependent protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Faap20 FA core complex associated protein 20 enables ISO
ISS
IBA
(PMID:22343915), (PMID:22705371)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:22343915 PMID:22705371 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:165,808,370...165,815,291
Ensembl chr 5:165,808,657...165,815,333
JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon NOT|enables ISO (PMID:24882218) RGD PMID:24882218 NCBI chr13:42,712,154...42,738,470
Ensembl chr13:42,712,159...42,737,143
JBrowse link
G Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma enables ISO
IBA
ISS
(MGI:3766891|PMID:17702576)
PMID:21873635
(PMID:18287044)
GO_REF:0000024
RGD
UniProt
PMID:17702576 PMID:18287044 PMID:21873635 GO_REF:0000024 MGI:3766891, RGD:13792537 NCBI chr  X:152,216,485...152,241,476
Ensembl chr  X:152,216,596...152,239,499
JBrowse link
G Mindy2 MINDY lysine 48 deubiquitinase 2 enables ISO (PMID:28082312) RGD PMID:28082312 NCBI chr 8:71,268,274...71,327,698
Ensembl chr 8:71,256,447...71,328,453
JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor contributes_to IDA PMID:12847084 ParkinsonsUK-UCL PMID:12847084 RGD:10047330 NCBI chr10:105,654,395...105,709,958
Ensembl chr10:105,654,812...105,709,913
JBrowse link
G Optn optineurin enables IEA
IBA
ISO
GO_REF:0000002
PMID:21873635
(MGI:3766891|PMID:17702576)
GO_REF:0000107
InterPro
RGD
Ensembl
PMID:17702576 PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:3766891, RGD:13792537 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
JBrowse link
G Otud7a OTU deubiquitinase 7A enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:117,064,428...117,388,217
Ensembl chr 1:117,064,496...117,386,480
JBrowse link
G Otud7b OTU deubiquitinase 7B enables ISS
ISO
IBA
GO_REF:0000024
(MGI:5447608|PMID:18281465)
PMID:21873635
ParkinsonsUK-UCL
RGD
PMID:18281465 PMID:21873635 GO_REF:0000024 MGI:5447608, RGD:13792537 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674
JBrowse link
G Parp10 poly (ADP-ribose) polymerase family, member 10 enables ISO (PMID:23575687) RGD PMID:23575687 NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304
JBrowse link
G Prpf8 pre-mRNA processing factor 8 enables ISO (PMID:20595234) RGD PMID:20595234 NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
JBrowse link
G Rnf168 ring finger protein 168 enables ISO
ISS
(PMID:19500350), (PMID:21041483), (PMID:22742833)
GO_REF:0000024
RGD
UniProt
PMID:19500350 PMID:21041483 PMID:22742833 GO_REF:0000024 NCBI chr11:68,486,313...68,508,296
Ensembl chr11:68,486,321...68,508,277
JBrowse link
G Rnf169 ring finger protein 169 enables ISO (PMID:22492721), (PMID:22733822), (PMID:22742833) RGD PMID:22492721 PMID:22733822 PMID:22742833 NCBI chr 1:154,250,462...154,311,867
Ensembl chr 1:154,254,473...154,311,653
JBrowse link
G Rnf31 ring finger protein 31 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,083,047...29,095,328
Ensembl chr15:29,083,631...29,101,915
JBrowse link
G Sprtn SprT-like N-terminal domain enables ISO
IEA
ISS
(PMID:22681887), (PMID:23042605)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22681887 PMID:23042605 GO_REF:0000024 GO_REF:0000107 NCBI chr19:52,857,599...52,864,864
Ensembl chr19:52,857,866...52,864,864
JBrowse link
G Sqstm1 sequestosome 1 enables IBA
ISO
ISS
PMID:21873635
(MGI:3610521|PMID:16252010)
(PMID:28404643)
GO_REF:0000024
RGD
UniProt
PMID:16252010 PMID:28404643 PMID:21873635 GO_REF:0000024 MGI:3610521, RGD:13792537 NCBI chr10:34,525,517...34,536,685
Ensembl chr10:34,525,519...34,536,673
JBrowse link
G Tab2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 enables IBA
ISO
ISS
PMID:21873635
(PMID:15327770), (PMID:19935683), (PMID:22158122)
GO_REF:0000024
RGD
UniProt
PMID:15327770 PMID:19935683 PMID:22158122 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:2,375,026...2,424,759
Ensembl chr 1:2,375,490...2,424,756
JBrowse link
G Tab3 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 enables ISO (PMID:15327770), (PMID:22158122) RGD PMID:15327770 PMID:22158122 NCBI chr  X:49,972,414...50,044,658
Ensembl chr  X:49,972,330...50,042,056
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:76,228,283...76,246,609
Ensembl chr14:76,228,371...76,275,265
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 enables ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(PMID:17525341), (PMID:17525342), (PMID:19261749), (PMID:22742833)
PMID:21873635
UniProt
Ensembl
RGD
PMID:17525341 PMID:17525342 PMID:19261749 PMID:22742833 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr17:9,523,793...9,592,810
Ensembl chr17:9,527,794...9,592,799
JBrowse link
G Wdr81 WD repeat domain 81 enables ISS
ISO
GO_REF:0000024
(PMID:28404643)
UniProt
RGD
PMID:28404643 GO_REF:0000024 NCBI chr10:60,281,969...60,295,374
Ensembl chr10:60,281,972...60,295,296
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 enables ISO (PMID:24657165) RGD PMID:24657165 NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 enables ISO
IBA
(PMID:18281465)
PMID:21873635
RGD PMID:18281465 PMID:21873635 RGD:13792537 NCBI chr 1:187,725,354...187,780,129
Ensembl chr 1:187,724,320...187,779,655
JBrowse link
G Zranb3 zinc finger RANBP2-type containing 3 enables ISO (PMID:22704558), (PMID:22705370), (PMID:22759634) RGD PMID:22704558 PMID:22705370 PMID:22759634 NCBI chr13:39,440,653...39,595,782
Ensembl chr13:39,440,889...39,595,670
JBrowse link
lysine-acetylated histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad2b ATPase family, AAA domain containing 2B enables ISO (PMID:22464331) RGD PMID:22464331 NCBI chr 6:27,914,546...28,070,103
Ensembl chr 6:27,912,862...28,067,047
JBrowse link
G Baz2a bromodomain adjacent to zinc finger domain, 2A enables ISO (MGI:3587127|PMID:16085498), (MGI:3852588|PMID:19578370) RGD PMID:16085498 PMID:19578370 MGI:3587127 MGI:3852588 NCBI chr 7:523,204...560,911
Ensembl chr 7:523,265...560,659
JBrowse link
G Brd2 bromodomain containing 2 enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:18406326)
UniProt
RGD
PMID:18406326 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
JBrowse link
G Brd3 bromodomain containing 3 enables ISO
IBA
(PMID:22464331), (PMID:27105114)
PMID:21873635
RGD PMID:22464331 PMID:27105114 PMID:21873635 RGD:13792537 NCBI chr 3:10,773,163...10,829,675
Ensembl chr 3:10,775,272...10,829,577
JBrowse link
G Brd4 bromodomain containing 4 enables ISO
IBA
(PMID:23728299)
PMID:21873635
(PMID:20871596), (PMID:23086925), (PMID:23317504), (PMID:29176719)
RGD PMID:20871596 PMID:23086925 PMID:23317504 PMID:23728299 PMID:29176719 More... RGD:13792537 NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
JBrowse link
G Brd7 bromodomain containing 7 enables ISO
IBA
(PMID:16265664)
PMID:21873635
RGD PMID:16265664 PMID:21873635 RGD:13792537 NCBI chr19:18,708,792...18,737,500
Ensembl chr19:18,709,022...18,737,494
JBrowse link
G Brd9 bromodomain containing 9 enables IBA
ISO
PMID:21873635
(PMID:22464331)
RGD PMID:22464331 PMID:21873635 RGD:13792537 NCBI chr 1:29,329,974...29,357,285
Ensembl chr 1:29,329,985...29,357,016
JBrowse link
G Brdt bromodomain testis associated enables ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(MGI:5447877|PMID:22922464)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:22922464 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5447877, RGD:13792537 NCBI chr14:2,421,094...2,445,842
Ensembl chr14:2,387,796...2,445,842
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 enables ISS
ISO
GO_REF:0000024
(MGI:4887326|PMID:17882261)
UniProt
RGD
PMID:17882261 GO_REF:0000024 MGI:4887326 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Dpf2 double PHD fingers 2 enables ISO (PMID:28533407), (PMID:29429572) RGD PMID:28533407 PMID:29429572 NCBI chr 1:203,183,674...203,199,037
Ensembl chr 1:203,183,686...203,198,983
JBrowse link
G Kmt2a lysine methyltransferase 2A enables ISO (PMID:19187761) RGD PMID:19187761 NCBI chr 8:45,116,771...45,193,320
Ensembl chr 8:45,118,814...45,193,181
JBrowse link
G Mllt3 MLLT3, super elongation complex subunit enables ISO (PMID:25417107) RGD PMID:25417107 NCBI chr 5:102,259,075...102,515,447
Ensembl chr 5:102,260,011...102,515,361
JBrowse link
G Phip pleckstrin homology domain interacting protein enables ISO (PMID:22464331) RGD PMID:22464331 NCBI chr 8:83,776,802...83,891,192
Ensembl chr 8:83,781,465...83,894,283
JBrowse link
G Psme4 proteasome activator subunit 4 enables IBA
ISO
PMID:21873635
(MGI:5494329|PMID:23706739)
RGD PMID:23706739 PMID:21873635 MGI:5494329, RGD:13792537 NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 enables ISO
IEA
(PMID:17582821)
GO_REF:0000107
RGD
Ensembl
PMID:17582821 GO_REF:0000107 NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 enables ISO (PMID:17996705) RGD PMID:17996705 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Thap7 THAP domain containing 7 enables ISO (PMID:15561719) RGD PMID:15561719 NCBI chr11:83,482,958...83,486,136
Ensembl chr11:83,483,037...83,486,436
JBrowse link
G Trim24 tripartite motif-containing 24 enables ISO (PMID:21164480) RGD PMID:21164480 NCBI chr 4:66,664,864...66,717,244
Ensembl chr 4:66,566,686...66,717,241
JBrowse link
G Yeats4 YEATS domain containing 4 enables ISO (PMID:30071723) RGD PMID:30071723 NCBI chr 7:52,858,313...52,865,454
Ensembl chr 7:52,858,305...52,865,635
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 enables ISO (PMID:27477906) RGD PMID:27477906 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
JBrowse link
G Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 enables ISO
IEA
(PMID:33227311)
GO_REF:0000107
RGD
Ensembl
PMID:33227311 GO_REF:0000107 NCBI chr10:57,413,265...57,550,888
Ensembl chr10:57,411,149...57,549,568
JBrowse link
G Zzz3 zinc finger, ZZ-type containing 3 enables ISO (PMID:30217978) RGD PMID:30217978 NCBI chr 2:241,330,366...241,397,308
Ensembl chr 2:241,331,022...241,397,307
JBrowse link
methylated histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07006823.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07010919.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07012658.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07015759.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07016166.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07016310.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:1,492,357...1,494,821 JBrowse link
G AABR07017902.2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr15:27,225,434...27,225,910 JBrowse link
G AABR07018272.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07026842.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07027088.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07035725.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07036101.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07036187.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07037302.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07037307.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07049437.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07050637.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07053236.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 3:1,529,712...1,534,661 JBrowse link
G AABR07057787.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07058017.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07061556.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07061871.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AC118841.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:68,280,970...68,281,345 JBrowse link
G Atrx ATRX, chromatin remodeler enables IEA
ISO
GO_REF:0000107
(PMID:21421568)
Ensembl
RGD
PMID:21421568 GO_REF:0000107 NCBI chr  X:70,850,981...70,997,330
Ensembl chr  X:70,850,981...70,997,330
JBrowse link
G Bptf bromodomain PHD finger transcription factor enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,980,279...92,082,731
Ensembl chr10:91,982,758...92,082,769
JBrowse link
G Cbx2 chromobox 2 enables IBA
ISO
PMID:21873635
(MGI:3619779|PMID:16537902)
RGD PMID:16537902 PMID:21873635 MGI:3619779, RGD:13792537 NCBI chr10:104,278,517...104,287,384
Ensembl chr10:104,278,549...104,287,383
JBrowse link
G Cbx3 chromobox 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:80,545,450...80,559,284
Ensembl chr 4:80,546,010...80,559,283
JBrowse link
G Cbx4 chromobox 4 enables ISO (MGI:3619779|PMID:16537902) RGD PMID:16537902 MGI:3619779 NCBI chr10:104,337,140...104,343,210 JBrowse link
G Cbx5 chromobox 5 enables ISO (PMID:19783980), (PMID:21029866)
PR:000045397 (MGI:3608198|PMID:16127177)
RGD PMID:16127177 PMID:19783980 PMID:21029866 MGI:3608198 NCBI chr 7:134,333,165...134,376,102
Ensembl chr 7:134,331,335...134,375,022
JBrowse link
G Cbx7 chromobox 7 enables ISO (MGI:3619779|PMID:16537902) RGD PMID:16537902 MGI:3619779 NCBI chr 7:111,460,656...111,479,231
Ensembl chr 7:111,460,656...111,477,973
JBrowse link
G Cbx8 chromobox 8 enables ISO (PMID:21029866) RGD PMID:21029866 NCBI chr10:104,294,518...104,296,956
Ensembl chr10:104,294,518...104,297,024
JBrowse link
G Cdyl chromodomain Y-like enables
NOT|enables
ISO
ISS
(PMID:22009739)
(PMID:18450745)
GO_REF:0000024
RGD
UniProt
PMID:18450745 PMID:22009739 GO_REF:0000024 NCBI chr17:28,982,009...29,204,345
Ensembl chr17:28,982,037...29,204,313
JBrowse link
G Cdyl2 chromodomain Y-like 2 enables ISO (MGI:3805281|PMID:18450745) RGD PMID:18450745 MGI:3805281 NCBI chr19:44,591,734...44,783,258
Ensembl chr19:44,597,459...44,783,022
JBrowse link
G Chd1 chromodomain helicase DNA binding protein 1 enables ISO (PMID:21029866), (PMID:28866611) RGD PMID:21029866 PMID:28866611 NCBI chr 1:56,661,743...56,729,119
Ensembl chr 1:56,664,054...56,728,125
JBrowse link
G Chd8 chromodomain helicase DNA binding protein 8 enables ISO
ISS
(PMID:17938208)
GO_REF:0000024
RGD
UniProt
PMID:17938208 GO_REF:0000024 NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
JBrowse link
G Cxxc1 CXXC finger protein 1 enables ISO (MGI:6258144|PMID:30365547) RGD PMID:30365547 MGI:6258144 NCBI chr18:67,813,185...67,818,556
Ensembl chr18:67,813,206...67,818,551
JBrowse link
G Dppa3 developmental pluripotency-associated 3 enables ISS
ISO
IBA
GO_REF:0000024
(MGI:5432962|PMID:22722204)
PMID:21873635
UniProt
RGD
PMID:22722204 PMID:21873635 GO_REF:0000024 MGI:5432962, RGD:13792537 NCBI chr 4:155,851,461...155,854,845
Ensembl chr 4:155,815,296...155,854,861
JBrowse link
G Dppa3l1 developmental pluripotency associated 3-like 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:56,421,825...56,422,277
Ensembl chr 8:56,421,825...56,422,277
JBrowse link
G Fam156b family with sequence similarity 156, member B enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr  X:19,338,236...19,340,924 JBrowse link
G Fmr1 FMRP translational regulator 1 enables IEA
ISO
ISS
GO_REF:0000107
(PMID:24813610)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:24813610 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Glyr1 glyoxylate reductase 1 homolog enables ISO
ISS
IBA
(PMID:20850016)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:20850016 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:10,532,036...10,567,639
Ensembl chr10:10,532,154...10,567,637
JBrowse link
G Hdgfl2 HDGF like 2 enables ISO (PMID:32459350) RGD PMID:32459350 NCBI chr 9:909,581...929,195
Ensembl chr 9:909,614...929,186
JBrowse link
G Ing1 inhibitor of growth family, member 1 enables IBA
ISO
PMID:21873635
(PMID:16728974)
RGD PMID:16728974 PMID:21873635 RGD:13792537 NCBI chr16:77,937,276...77,945,320
Ensembl chr16:77,937,279...77,946,264
JBrowse link
G Ing2 inhibitor of growth family, member 2 enables ISO
IBA
(PMID:16728974)
PMID:21873635
RGD PMID:16728974 PMID:21873635 RGD:13792537 NCBI chr16:44,573,592...44,584,180
Ensembl chr16:44,575,597...44,583,482
JBrowse link
G Ing3 inhibitor of growth family, member 3 enables IBA
ISO
PMID:21873635
(PMID:16728974), (PMID:19154204)
RGD PMID:16728974 PMID:19154204 PMID:21873635 RGD:13792537 NCBI chr 4:50,477,954...50,505,168
Ensembl chr 4:50,477,962...50,503,715
JBrowse link
G Ing4 inhibitor of growth family, member 4 enables IBA
ISO
PMID:21873635
(PMID:16728974)
RGD PMID:16728974 PMID:21873635 RGD:13792537 NCBI chr 4:157,841,882...157,850,519
Ensembl chr 4:157,841,951...157,850,265
JBrowse link
G Ing5 inhibitor of growth family, member 5 enables IBA
ISO
PMID:21873635
(PMID:16728974)
RGD PMID:16728974 PMID:21873635 RGD:13792537 NCBI chr 9:94,326,919...94,344,220
Ensembl chr 9:94,326,548...94,344,220
JBrowse link
G Jmjd7 jumonji domain containing 7 enables ISO (PMID:28847961) RGD PMID:28847961 NCBI chr 3:106,998,454...107,004,538
Ensembl chr 3:106,998,477...107,004,538
JBrowse link
G Kat8 lysine acetyltransferase 8 enables ISO (PMID:15960975) RGD PMID:15960975 NCBI chr 1:182,524,355...182,536,638 JBrowse link
G Kdm4a lysine demethylase 4A enables ISO (PMID:22373579) RGD PMID:22373579 NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
JBrowse link
G Kdm5a lysine demethylase 5A enables ISO (PMID:19430464) RGD PMID:19430464 NCBI chr 4:153,565,909...153,643,912
Ensembl chr 4:153,565,846...153,642,422
JBrowse link
G Kdm7a lysine demethylase 7A enables ISO (PMID:20023638) RGD PMID:20023638 NCBI chr 4:67,899,407...67,974,264
Ensembl chr 4:67,904,307...67,966,998
JBrowse link
G Kdm8 lysine demethylase 8 enables ISO
IEA
(PMID:28847961)
GO_REF:0000107
RGD
Ensembl
PMID:28847961 GO_REF:0000107 NCBI chr 1:180,013,969...180,028,829
Ensembl chr 1:180,020,656...180,028,841
JBrowse link
G Kmt2e lysine methyltransferase 2E enables ISO (PMID:23798402), (PMID:24130829) RGD PMID:23798402 PMID:24130829 NCBI chr 4:11,657,811...11,727,373
Ensembl chr 4:11,658,979...11,727,373
JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 enables ISS
ISO
GO_REF:0000024
UniProtKB:P10412|UniProtKB:P62805|UniProtKB:Q13185 (PMID:17540172), (PMID:18408754), (PMID:19144645), (PMID:20622853), (PMID:22120668)
UniProt
RGD
PMID:17540172 PMID:18408754 PMID:19144645 PMID:20622853 PMID:22120668 GO_REF:0000024 NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
JBrowse link
G L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 enables ISO
IBA
ISS
(PMID:19233876)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:19233876 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 7:113,186,303...113,209,706
Ensembl chr 7:113,186,370...113,207,489
JBrowse link
G LOC103694745 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC103694747 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC103694776 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC108353376 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC108353386 Y-linked testis-specific protein 1-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G LOC681107 similar to Y-linked testis-specific protein enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Lrwd1 leucine-rich repeats and WD repeat domain containing 1 enables ISO (PMID:21029866) RGD PMID:21029866 NCBI chr12:20,530,072...20,543,078
Ensembl chr12:20,530,012...20,549,536
JBrowse link
G Mbtd1 mbt domain containing 1 enables ISO
IBA
(PMID:19841675)
PMID:21873635
RGD PMID:19841675 PMID:21873635 RGD:13792537 NCBI chr10:78,839,140...78,895,413
Ensembl chr10:78,839,036...78,893,720
JBrowse link
G Morc3 MORC family CW-type zinc finger 3 enables ISO (PMID:26933034) RGD PMID:26933034 NCBI chr11:33,151,906...33,194,646
Ensembl chr11:33,152,025...33,194,646
JBrowse link
G Morc4 MORC family CW-type zinc finger 4 enables ISO (PMID:26933034) RGD PMID:26933034 NCBI chr  X:103,477,366...103,529,026
Ensembl chr  X:103,480,603...103,528,956
JBrowse link
G Mphosph8 M-phase phosphoprotein 8 enables ISO
ISS
(PMID:20871592)
GO_REF:0000024
RGD
UniProt
PMID:20871592 GO_REF:0000024 NCBI chr15:30,800,546...30,828,415 JBrowse link
G Msh6 mutS homolog 6 enables ISO (PMID:23622243) RGD PMID:23622243 NCBI chr 6:6,562,631...6,579,995
Ensembl chr 6:6,562,632...6,579,956
JBrowse link
G Msl3 MSL complex subunit 3 enables ISO (PMID:20657587) RGD PMID:20657587 NCBI chr  X:25,638,029...25,655,698
Ensembl chr  X:25,637,804...25,655,697
JBrowse link
G Mtf2 metal response element binding transcription factor 2 enables ISO
IBA
(PMID:23142980)
(MGI:5487476|PMID:23104054)
PMID:21873635
RGD PMID:23104054 PMID:23142980 PMID:21873635 MGI:5487476, RGD:13792537 NCBI chr14:1,639,256...1,683,513
Ensembl chr14:1,640,746...1,683,524
JBrowse link
G Ncapd3 non-SMC condensin II complex, subunit D3 enables ISO (PMID:20622854) RGD PMID:20622854 NCBI chr 8:25,437,067...25,506,375
Ensembl chr 8:25,437,123...25,506,373
JBrowse link
G Ncapg2 non-SMC condensin II complex, subunit G2 enables ISO (PMID:20622854) RGD PMID:20622854 NCBI chr 6:137,342,449...137,418,083
Ensembl chr 6:137,342,943...137,415,159
JBrowse link
G Phf1 PHD finger protein 1 enables IBA
ISO
PMID:21873635
(MGI:5487476|PMID:23104054)
(PMID:23142980), (PMID:23273982)
RGD PMID:23104054 PMID:23142980 PMID:23273982 PMID:21873635 MGI:5487476, RGD:13792537 NCBI chr20:5,017,765...5,022,872
Ensembl chr20:5,017,893...5,022,871
JBrowse link
G Phf19 PHD finger protein 19 enables ISO
IBA
(PMID:23104054), (PMID:23160351), (PMID:23273982)
(MGI:5487476|PMID:23104054)
PMID:21873635
RGD PMID:23104054 PMID:23160351 PMID:23273982 PMID:21873635 MGI:5487476, RGD:13792537 NCBI chr 3:18,175,281...18,197,289
Ensembl chr 3:18,175,282...18,196,405
JBrowse link
G Phf2 PHD finger protein 2 enables ISO (PMID:20129925), (PMID:21167174) RGD PMID:20129925 PMID:21167174 NCBI chr17:15,783,221...15,851,209
Ensembl chr17:15,781,864...15,851,208
JBrowse link
G Phf8 PHD finger protein 8 enables ISO (PMID:20023638), (PMID:20208542), (PMID:20346720), (PMID:20622853), (PMID:20622854), (PMID:21029866) RGD PMID:20023638 PMID:20208542 PMID:20346720 PMID:20622853 PMID:20622854 More... NCBI chr  X:20,524,103...20,623,459
Ensembl chr  X:20,524,558...20,623,410
JBrowse link
G Pygo1 pygopus family PHD finger 1 enables ISO (PMID:18498752) RGD PMID:18498752 NCBI chr 8:73,666,467...73,684,641
Ensembl chr 8:73,665,593...73,684,869
JBrowse link
G Rag2 recombination activating 2 enables ISO (MGI:4441252|PMID:18033247), (MGI:4441253|PMID:18025461) RGD PMID:18025461 PMID:18033247 MGI:4441252 MGI:4441253 NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
JBrowse link
G Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit enables ISO (PMID:15960975) RGD PMID:15960975 NCBI chr13:43,912,254...43,939,107
Ensembl chr13:43,912,254...43,939,107
JBrowse link
G Rrp8 ribosomal RNA processing 8 enables IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:18485871)
UniProt
RGD
PMID:18485871 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:160,081,092...160,088,709
Ensembl chr 1:160,084,295...160,089,331
JBrowse link
G Sgf29 SAGA complex associated factor 29 enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:20850016), (PMID:26421618)
UniProt
RGD
PMID:20850016 PMID:26421618 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 1:181,238,449...181,271,931
Ensembl chr 1:181,238,468...181,274,781
JBrowse link
G Spin1 spindlin 1 enables IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:21029866), (PMID:21960006), (PMID:23077255), (PMID:24589551), (PMID:29061846)
UniProt
RGD
PMID:21029866 PMID:21960006 PMID:23077255 PMID:24589551 PMID:29061846 More... GO_REF:0000024, RGD:13792537 NCBI chr17:14,055,685...14,105,366
Ensembl chr17:14,055,689...14,105,411
JBrowse link
G Spin2a spindlin family, member 2A enables ISO
IBA
(PMID:29061846)
PMID:21873635
RGD PMID:29061846 PMID:21873635 RGD:13792537 NCBI chr  X:17,511,018...17,513,001
Ensembl chr  X:17,511,022...17,513,001
JBrowse link
G Spin4 spindlin family, member 4 enables ISO (PMID:29061846) RGD PMID:29061846 NCBI chr  X:59,888,728...59,893,761 JBrowse link
G Ssty1 spermiogenesis specific transcript on the Y 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Suz12 SUZ12 polycomb repressive complex 2 subunit enables ISO (PMID:21029866) RGD PMID:21029866 NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
JBrowse link
G Tdrd3 tudor domain containing 3 enables IEA
ISO
ISS
GO_REF:0000107
(PMID:21172665)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:21172665 GO_REF:0000024 GO_REF:0000107 NCBI chr15:63,340,531...63,497,208
Ensembl chr15:63,341,235...63,476,110
JBrowse link
G Thap7 THAP domain containing 7 enables ISO (PMID:15561719) RGD PMID:15561719 NCBI chr11:83,482,958...83,486,136
Ensembl chr11:83,483,037...83,486,436
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 enables ISO (PMID:22373579), (PMID:23760478), (PMID:28241136)
(MGI:5887191|PMID:23209566)
RGD PMID:22373579 PMID:23209566 PMID:23760478 PMID:28241136 MGI:5887191 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
JBrowse link
G Trim24 tripartite motif-containing 24 NOT|enables ISO (PMID:21164480) RGD PMID:21164480 NCBI chr 4:66,664,864...66,717,244
Ensembl chr 4:66,566,686...66,717,241
JBrowse link
G Uhrf1 ubiquitin-like with PHD and ring finger domains 1 enables ISO
IEA
ISS
(PMID:17967883), (PMID:21029866), (PMID:21489993)
GO_REF:0000107
(MGI:5448517|PMID:21489993)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17967883 PMID:21029866 PMID:21489993 GO_REF:0000024 GO_REF:0000107 MGI:5448517 NCBI chr 9:1,133,117...1,154,639
Ensembl chr 9:1,134,909...1,154,631
JBrowse link
G Wdr5 WD repeat domain 5 enables ISO
ISS
(PMID:16600877), (PMID:18840606)
GO_REF:0000024
RGD
UniProt
PMID:16600877 PMID:18840606 GO_REF:0000024 NCBI chr 3:10,836,964...10,856,682
Ensembl chr 3:10,837,025...10,856,671
JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 enables ISO
IBA
(PMID:20826339), (PMID:32744506)
PMID:21873635
(MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261), (MGI:6443266|PMID:32352380)
RGD PMID:20826339 PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 More... MGI:6358520 MGI:6442007 MGI:6443266, RGD:13792537 NCBI chr12:18,880,625...18,910,713
Ensembl chr12:18,880,633...18,910,711
JBrowse link
G Zcwpw1l1 zinc finger CW-type and PWWP domain containing 1-like 1 enables ISO
IBA
(MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261), (MGI:6443266|PMID:32352380)
PMID:21873635
RGD PMID:31453335 PMID:32352380 PMID:32374261 PMID:21873635 MGI:6358520 MGI:6442007 MGI:6443266, RGD:13792537 NCBI chr12:17,798,650...17,812,208 JBrowse link
G Zcwpw2 zinc finger CW-type and PWWP domain containing 2 enables ISO
IBA
(PMID:26933034)
PMID:21873635
RGD PMID:26933034 PMID:21873635 RGD:13792537 NCBI chr 8:117,628,838...117,773,096
Ensembl chr 8:117,681,238...117,773,739
JBrowse link
G Zmynd11 zinc finger, MYND-type containing 11 enables ISO (PMID:24675531)
(MGI:5560379|PMID:24590075)
RGD PMID:24590075 PMID:24675531 MGI:5560379 NCBI chr17:60,542,669...60,631,913
Ensembl chr17:60,543,077...60,631,902
JBrowse link
G Zmynd8 zinc finger, MYND-type containing 8 enables ISO (PMID:27477906) RGD PMID:27477906 NCBI chr 3:154,528,917...154,629,532
Ensembl chr 3:154,529,043...154,628,463
JBrowse link
G Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 enables ISO (PMID:33227311) RGD PMID:33227311 NCBI chr10:57,413,265...57,550,888
Ensembl chr10:57,411,149...57,549,568
JBrowse link
G Zzz3 zinc finger, ZZ-type containing 3 enables ISO (PMID:30217978) RGD PMID:30217978 NCBI chr 2:241,330,366...241,397,308
Ensembl chr 2:241,331,022...241,397,307
JBrowse link
phosphorylated histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thap7 THAP domain containing 7 enables ISO (PMID:15561719) RGD PMID:15561719 NCBI chr11:83,482,958...83,486,136
Ensembl chr11:83,483,037...83,486,436
JBrowse link
phosphorylation-dependent protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 enables ISO UniProtKB:B3KU38|UniProtKB:P0DPB3 (PMID:25950943) RGD PMID:25950943 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Ank3 ankyrin 3 enables IPI PMID:25950943 UniProt PMID:25950943 PMID:25950943 RGD:13800538, RGD:13800538 NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase enables ISO UniProtKB:Q8NDB2 (PMID:11782428) RGD PMID:11782428 NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
JBrowse link
G Plcg2 phospholipase C, gamma 2 enables IEA
ISO
GO_REF:0000107
UniProtKB:Q9QZE2 (MGI:2179131|PMID:10744659)
Ensembl
RGD
PMID:10744659 GO_REF:0000107 MGI:2179131 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 enables ISO
IEA
UniProtKB:Q96LA5|UniProtKB:Q96LC7 (PMID:11162587), (PMID:12163025)
GO_REF:0000107
RGD
Ensembl
PMID:11162587 PMID:12163025 GO_REF:0000107 NCBI chr 4:157,526,034...157,550,783
Ensembl chr 4:157,526,035...157,550,984
JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 enables IEA
ISO
GO_REF:0000107
UniProtKB:Q9QZE2 (MGI:2179131|PMID:10744659)
Ensembl
RGD
PMID:10744659 GO_REF:0000107 MGI:2179131 NCBI chr 9:2,161,985...2,209,951
Ensembl chr 9:2,157,900...2,208,937
JBrowse link
polyubiquitin modification-dependent protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07001519.1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Abraxas1 abraxas 1, BRCA1 A complex subunit enables ISO
IEA
IBA
ISS
(PMID:19261749)
GO_REF:0000107
PMID:21873635
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19261749 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr14:8,796,281...8,810,625
Ensembl chr14:8,796,266...8,810,622
JBrowse link
G Abraxas2 abraxas 2, BRISC complex subunit enables ISO
IBA
(PMID:19261749)
PMID:21873635
RGD PMID:19261749 PMID:21873635 RGD:13792537 NCBI chr 1:187,647,078...187,672,660
Ensembl chr 1:187,647,067...187,672,655
JBrowse link
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 enables ISO (MGI:3616374|PMID:16461359) RGD PMID:16461359 MGI:3616374 NCBI chr 4:10,674,064...10,724,848
Ensembl chr 4:10,674,064...10,725,244
JBrowse link
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase enables ISO (MGI:3758968|PMID:17908927) RGD PMID:17908927 MGI:3758968 NCBI chr 2:204,705,053...204,760,966
Ensembl chr 2:204,705,053...204,760,828
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 enables ISO
ISS
(PMID:19261749)
GO_REF:0000024
RGD
UniProt
PMID:19261749 GO_REF:0000024 NCBI chr 6:24,369,021...24,833,335
Ensembl chr 6:24,369,022...24,833,951
JBrowse link
G Bag6 BAG cochaperone 6 enables IBA
ISO
ISS
PMID:21873635
(MGI:4887294|PMID:20713601)
GO_REF:0000024
RGD
UniProt
PMID:20713601 PMID:21873635 GO_REF:0000024 MGI:4887294, RGD:13792537 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex, subunit 3 enables ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:19261749)
UniProt
RGD
PMID:19261749 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 enables ISO (PMID:15936278), (PMID:21625540) RGD PMID:15936278 PMID:21625540 NCBI chr 9:76,731,060...76,739,278
Ensembl chr 9:76,731,065...76,739,277
JBrowse link
G Dzip3 DAZ interacting zinc finger protein 3 enables ISO
IBA
(PMID:12538761)
PMID:21873635
RGD PMID:12538761 PMID:21873635 RGD:13792537 NCBI chr11:51,823,235...51,893,353
Ensembl chr11:51,823,231...51,893,353
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 enables ISO (PMID:24768539) RGD PMID:24768539 NCBI chr 5:124,045,865...124,146,221
Ensembl chr 5:124,045,926...124,146,221
JBrowse link
G Faap20 FA core complex associated protein 20 enables ISO
ISS
(PMID:22396592)
GO_REF:0000024
RGD
UniProt
PMID:22396592 GO_REF:0000024 NCBI chr 5:165,808,370...165,815,291
Ensembl chr 5:165,808,657...165,815,333
JBrowse link
G Hdac6 histone deacetylase 6 enables ISO
IEA
(PMID:14675537)
GO_REF:0000107
RGD
Ensembl
PMID:14675537 GO_REF:0000107 NCBI chr  X:14,550,645...14,572,445
Ensembl chr  X:14,551,044...14,572,441
JBrowse link
G Optn optineurin enables ISO (PMID:21617041) RGD PMID:21617041 NCBI chr17:73,209,572...73,260,251
Ensembl chr17:73,209,575...73,260,251
JBrowse link
G Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,598,934...182,608,250
Ensembl chr 2:182,598,934...182,608,194
JBrowse link
G Rad18 RAD18 E3 ubiquitin protein ligase enables ISO (PMID:22742833) RGD PMID:22742833 NCBI chr 4:145,735,654...145,821,102
Ensembl chr 4:145,735,654...145,821,069
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein enables IBA
ISO
PMID:21873635
(PMID:12643283)
RGD PMID:12643283 PMID:21873635 RGD:13792537 NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695
JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein enables ISO
IBA
(PMID:19435460)
PMID:21873635
RGD PMID:19435460 PMID:21873635 RGD:13792537 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319
JBrowse link
G RGD1562433 similar to ubiquilin 1 isoform 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,592,368...158,594,244
Ensembl chr 1:158,592,367...158,594,481
JBrowse link
G Sharpin SHANK-associated RH domain interactor enables ISS
ISO
GO_REF:0000024
(PMID:21455173), (PMID:21455181)
UniProt
RGD
PMID:21455173 PMID:21455181 GO_REF:0000024 NCBI chr 7:108,070,681...108,075,012
Ensembl chr 7:108,070,687...108,074,955
JBrowse link
G Sprtn SprT-like N-terminal domain enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:52,857,599...52,864,864
Ensembl chr19:52,857,866...52,864,864
JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 enables IBA
ISO
PMID:21873635
(MGI:5319605|PMID:18212736)
RGD PMID:18212736 PMID:21873635 MGI:5319605, RGD:13792537 NCBI chr10:39,037,048...39,084,328
Ensembl chr10:39,037,058...39,077,625
JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 enables IBA
ISO
PMID:21873635
(PMID:18212736)
RGD PMID:18212736 PMID:21873635 RGD:13792537 NCBI chr14:76,228,283...76,246,609
Ensembl chr14:76,228,371...76,275,265
JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 enables ISO
IBA
(PMID:18212736)
PMID:21873635
RGD PMID:18212736 PMID:21873635 RGD:13792537 NCBI chr 4:94,867,258...94,908,780 JBrowse link
G Ubl7 ubiquitin-like 7 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:58,321,157...58,340,353
Ensembl chr 8:58,320,866...58,340,344
JBrowse link
G Ubqln1 ubiquilin 1 enables IEA
ISS
ISO
IBA
GO_REF:0000107
GO_REF:0000024
(PMID:15147878)
PMID:21873635
Ensembl
UniProt
RGD
PMID:15147878 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Ubqln2 ubiquilin 2 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:17,853,086...17,856,505
Ensembl chr  X:17,853,114...17,856,505
JBrowse link
G Ubqln3 ubiquilin 3 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,604,629...158,607,318
Ensembl chr 1:158,604,355...158,607,389
JBrowse link
G Ubqln4 ubiquilin 4 enables IBA
ISO
PMID:21873635
UniProtKB:Q6ICB0 (PMID:15280365), (PMID:29666234), (PMID:30612738)
RGD PMID:15280365 PMID:29666234 PMID:30612738 PMID:21873635 RGD:13792537 NCBI chr 2:174,012,726...174,028,062
Ensembl chr 2:174,012,777...174,028,059
JBrowse link
G Ubqlnl ubiquilin-like enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:158,615,177...158,617,426
Ensembl chr 1:158,615,056...158,617,512
JBrowse link
G Ubxn1 UBX domain protein 1 enables ISO (PMID:15362974) RGD PMID:15362974 NCBI chr 1:205,765,212...205,769,236
Ensembl chr 1:205,745,120...205,816,520
JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 enables IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:82,161,618...82,185,107
Ensembl chr11:82,161,619...82,185,087
JBrowse link
G Vcp valosin-containing protein enables IBA
ISO
PMID:21873635
(MGI:4441139|PMID:11483959)
(PMID:11483959)
RGD PMID:11483959 PMID:21873635 MGI:4441139, RGD:13792537 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Zfand2b zinc finger AN1-type containing 2B enables ISO (MGI:5563003|PMID:24160817) RGD PMID:24160817 MGI:5563003 NCBI chr 9:76,665,466...76,668,447
Ensembl chr 9:76,665,546...76,668,445
JBrowse link
G Zfand6 zinc finger AN1-type containing 6 enables IBA
ISO
ISS
PMID:21873635
(MGI:5427069|PMID:21980954)
GO_REF:0000024
RGD
UniProt
PMID:21980954 PMID:21873635 GO_REF:0000024 MGI:5427069, RGD:13792537 NCBI chr 1:138,581,002...138,652,052
Ensembl chr 1:138,581,002...138,651,939
JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 enables ISO (PMID:25752573), (PMID:25752577) RGD PMID:25752573 PMID:25752577 NCBI chr 1:187,725,354...187,780,129
Ensembl chr 1:187,724,320...187,779,655
JBrowse link
sumo-dependent protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Daxx death-domain associated protein enables ISO
IEA
UniProtKB:P29590 (PMID:17081986)
GO_REF:0000107
RGD
Ensembl
PMID:17081986 GO_REF:0000107 NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
JBrowse link
G Pml PML nuclear body scaffold enables ISO UniProtKB:Q9UER7 (PMID:17081986) RGD PMID:17081986 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
ubiquitin modification-dependent histone binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 enables ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21179169)
UniProt
Ensembl
RGD
PMID:21179169 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:13,270,239...13,297,438
Ensembl chr 4:13,270,191...13,297,431
JBrowse link
G Jarid2 jumonji and AT-rich interaction domain containing 2 enables ISO MGI:5888989 (MGI:5888829|PMID:27892467) RGD PMID:27892467 MGI:5888829 NCBI chr17:19,777,487...19,957,696
Ensembl chr17:19,777,266...19,955,690
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 enables ISO (PMID:23760478) RGD PMID:23760478 NCBI chr 3:108,166,574...108,270,229
Ensembl chr 3:108,169,980...108,269,822
JBrowse link
G Usp15 ubiquitin specific peptidase 15 enables ISO
IEA
(PMID:24526689)
GO_REF:0000107
RGD
Ensembl
PMID:24526689 GO_REF:0000107 NCBI chr 7:58,756,714...58,848,778
Ensembl chr 7:58,756,872...58,848,721
JBrowse link
ubiquitin-dependent protein binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd13a ankyrin repeat domain 13a enables ISO UniProtKB:P00533 (PMID:22298428) RGD PMID:22298428 NCBI chr12:41,798,196...41,828,327
Ensembl chr12:41,798,199...41,829,327
JBrowse link
G Ankrd13b ankyrin repeat domain 13B enables ISO UniProtKB:P00533 (PMID:22298428) RGD PMID:22298428 NCBI chr10:62,319,660...62,338,342
Ensembl chr10:62,319,647...62,340,253
JBrowse link
G Ankrd13d ankyrin repeat domain 13D enables ISO UniProtKB:P00533 (PMID:22298428) RGD PMID:22298428 NCBI chr 1:201,565,712...201,577,987
Ensembl chr 1:201,565,712...201,577,933
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 enables ISO (PMID:28031292) RGD PMID:28031292 NCBI chr 9:76,731,060...76,739,278
Ensembl chr 9:76,731,065...76,739,277
JBrowse link
G Faap20 FA core complex associated protein 20 enables ISO
ISS
(PMID:22266823)
GO_REF:0000024
RGD
UniProt
PMID:22266823 GO_REF:0000024 NCBI chr 5:165,808,370...165,815,291
Ensembl chr 5:165,808,657...165,815,333
JBrowse link
G Fan1 FANCD2 and FANCI associated nuclease 1 enables ISO (PMID:20603015), (PMID:20603016) RGD PMID:20603015 PMID:20603016 NCBI chr 1:117,915,323...117,945,044
Ensembl chr 1:117,917,099...117,944,977
JBrowse link
G Hgs hepatocyte growth factor-regulated tyrosine kinase substrate enables ISO (MGI:5619493|PMID:11916981) RGD PMID:11916981 MGI:5619493 NCBI chr10:105,739,617...105,757,838
Ensembl chr10:105,739,296...105,757,835
JBrowse link
G Ide insulin degrading enzyme enables ISO UniProtKB:P0CG48 (PMID:21185309) RGD PMID:21185309 NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 enables ISO (PMID:17116753) RGD PMID:17116753 NCBI chr 5:143,087,759...143,109,807
Ensembl chr 5:143,087,759...143,109,807
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 19910
    binding 16997
      protein binding 14384
        modification-dependent protein binding 196
          ADP-D-ribose modification-dependent protein binding + 0
          acetylation-dependent protein binding + 22
          glycosylation-dependent protein binding 0
          methylation-dependent protein binding + 105
          phosphorylation-dependent protein binding + 7
          polyubiquitin modification-dependent protein binding + 56
          ubiquitination-like modification-dependent protein binding + 15
paths to the root