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ONTOLOGY REPORT - ANNOTATIONS


Term:sperm flagellum assembly
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Accession:GO:0120316 term browser browse the term
Definition:The assembly and organization of the sperm flagellum, the microtubule-based axoneme and associated structures that are part of a sperm flagellum (or cilium).



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sperm flagellum assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap4 A-kinase anchoring protein 4 acts_upstream_of_or_within
involved_in
ISO
IEA
MGI:2684287 (MGI:3612361|PMID:15385410)
GO_REF:0000107
RGD
Ensembl
PMID:15385410 GO_REF:0000107 MGI:3612361 NCBI chr  X:15,435,391...15,445,684
Ensembl chr  X:15,435,410...15,445,684
JBrowse link
G Ccdc146 coiled-coil domain containing 146 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:7576814|PMID:38038747)
UniProt
RGD
PMID:38038747 GO_REF:0000024 MGI:7576814 NCBI chr 4:13,662,766...13,811,619
Ensembl chr 4:13,662,766...13,811,608
JBrowse link
G Ccdc38 coiled-coil domain containing 38 acts_upstream_of
involved_in
ISO MGI:7287391 (MGI:7286438|PMID:35587122)
(MGI:7581111|PMID:37709195)
RGD PMID:35587122 PMID:37709195 MGI:7286438 MGI:7581111 NCBI chr 7:28,055,883...28,129,938
Ensembl chr 7:28,059,798...28,130,441
JBrowse link
G Cep128 centrosomal protein 128 acts_upstream_of_or_within ISO MGI:7261352 (MGI:7259400|PMID:35296684) RGD PMID:35296684 MGI:7259400 NCBI chr 6:109,951,009...110,328,686
Ensembl chr 6:109,951,061...110,328,713
JBrowse link
G Cfap221 cilia and flagella associated protein 221 acts_upstream_of_or_within ISO MGI:2443727|MGI:3608909 (MGI:3771635|PMID:18039845), (MGI:6453448|PMID:32704025) RGD PMID:18039845 PMID:32704025 MGI:3771635 MGI:6453448 NCBI chr13:31,046,550...31,118,141
Ensembl chr13:31,046,535...31,116,899
JBrowse link
G Cfap53 cilia and flagella associated protein 53 involved_in ISO (MGI:6721190|PMID:34124066) RGD PMID:34124066 MGI:6721190 NCBI chr18:67,884,651...67,955,873
Ensembl chr18:67,869,855...67,952,318
JBrowse link
G Cfap54 cilia and flagella associated protein 54 acts_upstream_of_or_within ISO MGI:2443727|MGI:2684947 (MGI:6453448|PMID:32704025) RGD PMID:32704025 MGI:6453448 NCBI chr 7:27,316,498...27,601,630
Ensembl chr 7:27,316,502...27,602,144
JBrowse link
G Cfap57 cilia and flagella associated protein 57 acts_upstream_of_or_within ISO MGI:7529021 (MGI:7441375|PMID:36752199) RGD PMID:36752199 MGI:7441375 NCBI chr 5:132,074,404...132,148,102
Ensembl chr 5:132,074,395...132,148,462
JBrowse link
G Cfap58 cilia and flagella associated protein 58 involved_in ISO (MGI:6695667|PMID:31904090) RGD PMID:31904090 MGI:6695667 NCBI chr 1:246,802,691...246,911,363
Ensembl chr 1:246,802,665...246,911,374
JBrowse link
G Cfap61 cilia and flagella associated protein 61 acts_upstream_of
involved_in
acts_upstream_of_or_within
ISO MGI:6864090 (MGI:6832781|PMID:34792097)
(PMID:35174165)
MGI:7444390|MGI:7448443 (MGI:7435087|PMID:35387802), (MGI:7443006|PMID:36659204)
RGD PMID:34792097 PMID:35174165 PMID:35387802 PMID:36659204 MGI:6832781 MGI:7435087 MGI:7443006 NCBI chr 3:133,354,400...133,633,310
Ensembl chr 3:133,354,197...133,633,320
JBrowse link
G Dnali1 dynein, axonemal, light intermediate chain 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:7435934|PMID:36792588)
(PMID:36792588)
UniProt
RGD
PMID:36792588 GO_REF:0000024 MGI:7435934 NCBI chr 5:137,318,475...137,327,313
Ensembl chr 5:137,318,477...137,327,336
JBrowse link
G Dnhd1 dynein heavy chain domain 1 involved_in ISO (PMID:34932939)
(MGI:6857915|PMID:34932939)
RGD PMID:34932939 MGI:6857915 NCBI chr 1:159,990,785...160,077,990
Ensembl chr 1:159,990,438...160,074,858
JBrowse link
G Drc1 dynein regulatory complex subunit 1 acts_upstream_of_or_within ISO (MGI:6849607|PMID:34169321) RGD PMID:34169321 MGI:6849607 NCBI chr 6:26,025,004...26,059,438
Ensembl chr 6:26,025,005...26,059,414
JBrowse link
G Dzip1 DAZ interacting zinc finger protein 1 involved_in ISO (PMID:32051257) RGD PMID:32051257 NCBI chr15:95,956,329...96,009,994
Ensembl chr15:95,956,398...96,010,066
JBrowse link
G Ift81 intraflagellar transport 81 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:6445309|PMID:32233951)
UniProt
Ensembl
RGD
PMID:32233951 GO_REF:0000024 GO_REF:0000107 MGI:6445309 NCBI chr12:33,957,744...34,037,164
Ensembl chr12:33,957,806...34,037,057
JBrowse link
G Pdcl2 phosducin-like 2 acts_upstream_of_or_within ISO MGI:7546801 (MGI:7510055|PMID:36278277) RGD PMID:36278277 MGI:7510055 NCBI chr14:31,874,563...31,895,265
Ensembl chr14:31,874,578...31,895,272
JBrowse link
G Pfn4 profilin family, member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:7333311|PMID:35950913)
UniProt
RGD
PMID:35950913 GO_REF:0000024 MGI:7333311 NCBI chr 6:27,786,619...27,796,710
Ensembl chr 6:27,786,619...27,796,710
JBrowse link
G Rsph6a radial spoke head 6 homolog A involved_in ISO (MGI:6203178|PMID:30185526) RGD PMID:30185526 MGI:6203178 NCBI chr 1:78,700,801...78,720,444
Ensembl chr 1:78,700,814...78,720,431
JBrowse link
G Spef2 sperm flagellar 2 acts_upstream_of_or_within ISO MGI:1922208 (MGI:6453448|PMID:32704025) RGD PMID:32704025 MGI:6453448 NCBI chr 2:58,512,489...58,694,718
Ensembl chr 2:58,512,489...58,694,664
JBrowse link
G Yif1b Yip1 interacting factor homolog B, membrane trafficking protein involved_in ISO
ISS
(MGI:6718237|PMID:33103737)
GO_REF:0000024
RGD
UniProt
PMID:33103737 GO_REF:0000024 MGI:6718237 NCBI chr 1:84,539,673...84,549,906
Ensembl chr 1:84,539,722...84,549,904
JBrowse link
sperm axoneme assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc2 armadillo repeat containing 2 involved_in ISO
IBA
(PMID:30686508)
GO_REF:0000033
(MGI:6368074|PMID:30686508)
RGD
GO_Central
PMID:30686508 GO_REF:0000033 MGI:6368074 NCBI chr20:45,395,859...45,501,808
Ensembl chr20:45,394,127...45,504,819
JBrowse link
G Bbof1 basal body orientation factor 1 involved_in ISO (MGI:7565919|PMID:37198331) RGD PMID:37198331 MGI:7565919 NCBI chr 6:104,055,246...104,081,036
Ensembl chr 6:104,055,241...104,082,071
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (MGI:3512844|PMID:15539463) RGD PMID:15539463 MGI:3512844 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Ccdc146 coiled-coil domain containing 146 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:7576814|PMID:38038747)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:38038747 GO_REF:0000024 GO_REF:0000107 MGI:7576814 NCBI chr 4:13,662,766...13,811,619
Ensembl chr 4:13,662,766...13,811,608
JBrowse link
G Cep131 centrosomal protein 131 acts_upstream_of_or_within ISO MGI:3870375 (MGI:5647985|PMID:24415959) RGD PMID:24415959 MGI:5647985 NCBI chr10:105,346,015...105,370,380
Ensembl chr10:105,346,015...105,370,380
JBrowse link
G Cfap157 cilia and flagella associated protein 157 involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(MGI:5812811|PMID:27965440)
UniProt
GO_Central
RGD
PMID:27965440 GO_REF:0000024 GO_REF:0000033 MGI:5812811 NCBI chr 3:16,066,521...16,073,504
Ensembl chr 3:16,066,521...16,073,495
JBrowse link
G Cfap206 cilia and flagella associated protein 206 involved_in ISO
IBA
IEA
ISS
(MGI:6452763|PMID:32376681)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:32376681 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6452763 NCBI chr 5:49,254,399...49,299,145
Ensembl chr 5:49,254,408...49,299,090
JBrowse link
G Cfap43 cilia and flagella associated protein 43 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:29449551)
GO_REF:0000033
MGI:6140013|MGI:6431400 (MGI:6164072|PMID:29522859), (MGI:6402702|PMID:31884020)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)
RGD
GO_Central
PMID:28552195 PMID:29449551 PMID:29522859 PMID:31884020 GO_REF:0000033 MGI:6119337 MGI:6140851 MGI:6164072 MGI:6402702 NCBI chr 1:246,625,259...246,712,438
Ensembl chr 1:246,625,262...246,712,443
JBrowse link
G Cfap44 cilia and flagella associated protein 44 involved_in
acts_upstream_of_or_within
ISO (PMID:29449551)
(MGI:6119337|PMID:29449551), (MGI:6140851|PMID:28552195)
MGI:6140014 (MGI:6164072|PMID:29522859)
RGD PMID:28552195 PMID:29449551 PMID:29522859 MGI:6119337 MGI:6140851 MGI:6164072 NCBI chr11:56,199,772...56,283,964
Ensembl chr11:56,201,049...56,283,986
JBrowse link
G Cfap47 cilia and flagella associated protein 47 involved_in ISO (PMID:33472045)
(MGI:6716514|PMID:33472045)
RGD PMID:33472045 MGI:6716514 NCBI chr  X:43,264,687...43,616,607
Ensembl chr  X:43,263,490...43,616,852
JBrowse link
G Cfap58 cilia and flagella associated protein 58 acts_upstream_of_or_within
involved_in
ISO MGI:6477396 (MGI:6472114|PMID:32791035)
(PMID:32791035)
RGD PMID:32791035 MGI:6472114 NCBI chr 1:246,802,691...246,911,363
Ensembl chr 1:246,802,665...246,911,374
JBrowse link
G Cfap65 cilia and flagella associated protein 65 involved_in ISO
IBA
(MGI:6393461|PMID:31571197)
GO_REF:0000033
RGD
GO_Central
PMID:31571197 GO_REF:0000033 MGI:6393461 NCBI chr 9:76,459,211...76,494,199
Ensembl chr 9:76,459,211...76,494,128
JBrowse link
G Cfap69 cilia and flagella associated protein 69 acts_upstream_of_or_within ISO MGI:6431857 (MGI:6431182|PMID:30415212)
(PMID:30415212)
RGD PMID:30415212 MGI:6431182 NCBI chr 4:28,379,604...28,452,562
Ensembl chr 4:28,375,996...28,450,698
JBrowse link
G Cfap97d1 CFAP97 domain containing 1 involved_in ISO
IBA
(MGI:6452255|PMID:32785227)
GO_REF:0000033
RGD
GO_Central
PMID:32785227 GO_REF:0000033 MGI:6452255 NCBI chr10:86,933,585...86,944,566
Ensembl chr10:86,933,808...86,938,244
JBrowse link
G Dnah1 dynein, axonemal, heavy chain 1 involved_in ISO
ISS
(PMID:24360805)
GO_REF:0000024
RGD
UniProt
PMID:24360805 GO_REF:0000024 NCBI chr16:6,455,514...6,517,103
Ensembl chr16:6,456,002...6,518,350
JBrowse link
G Drc7 dynein regulatory complex subunit 7 involved_in ISO (MGI:6391458|PMID:31961863) RGD PMID:31961863 MGI:6391458 NCBI chr19:9,943,452...9,961,266
Ensembl chr19:9,943,456...9,961,163
JBrowse link
G Fsip2 fibrous sheath-interacting protein 2 acts_upstream_of_or_within_positive_effect ISO (PMID:30137358), (PMID:30745215) RGD PMID:30137358 PMID:30745215 NCBI chr 3:67,962,345...68,032,866
Ensembl chr 3:67,962,360...68,032,868
JBrowse link
G Ift88 intraflagellar transport 88 acts_upstream_of_or_within ISO MGI:2157527 (MGI:4939808|PMID:21337470) RGD PMID:21337470 MGI:4939808 NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
JBrowse link
G Iqcg IQ motif containing G involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(MGI:5608638|PMID:24849454)
UniProt
GO_Central
TreeGrafter
Ensembl
RGD
PMID:24849454 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5608638 NCBI chr11:67,730,117...67,771,170
Ensembl chr11:67,730,247...67,771,168
JBrowse link
G Meig1 meiosis/spermiogenesis associated 1 acts_upstream_of_or_within ISO MGI:3843498|MGI:4367077 (MGI:5475083|PMID:23258628) RGD PMID:23258628 MGI:5475083 NCBI chr17:74,810,791...74,828,433
Ensembl chr17:74,814,632...74,828,433
JBrowse link
G Mns1 meiosis-specific nuclear structural 1 involved_in ISO (MGI:5318625|PMID:22396656) RGD PMID:22396656 MGI:5318625 NCBI chr 8:73,148,877...73,169,570
Ensembl chr 8:73,148,877...73,176,925
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:2153143 (MGI:2151733|PMID:11585928) RGD PMID:11585928 MGI:2151733 NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903
JBrowse link
G Pdcl2 phosducin-like 2 acts_upstream_of_or_within ISO MGI:7546801 (MGI:7510055|PMID:36278277) RGD PMID:36278277 MGI:7510055 NCBI chr14:31,874,563...31,895,265
Ensembl chr14:31,874,578...31,895,272
JBrowse link
G Pla2g3 phospholipase A2, group III acts_upstream_of_or_within ISO MGI:4461174 (MGI:4459354|PMID:20424323) RGD PMID:20424323 MGI:4459354 NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913
JBrowse link
G Spag16 sperm associated antigen 16 acts_upstream_of_or_within ISO MGI:3606977 (MGI:3052627|PMID:15328412) RGD PMID:15328412 MGI:3052627 NCBI chr 9:71,333,005...72,252,772
Ensembl chr 9:71,332,992...72,252,708
JBrowse link
G Spag6 sperm associated antigen 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr17:81,352,372...81,401,504
Ensembl chr17:81,349,084...81,401,501
JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:2662475 (MGI:2389554|PMID:12391165)
GO_REF:0000033
RGD
GO_Central
PMID:12391165 GO_REF:0000033 MGI:2389554 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364
JBrowse link
G Spef2 sperm flagellar 2 involved_in
acts_upstream_of_or_within
ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000118
(PMID:31048344), (PMID:31151990)
MGI:5295267 (MGI:5292446|PMID:21715716)
GO_REF:0000107
UniProt
GO_Central
TreeGrafter
RGD
Ensembl
PMID:21715716 PMID:31048344 PMID:31151990 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5292446 NCBI chr 2:58,512,489...58,694,718
Ensembl chr 2:58,512,489...58,694,664
JBrowse link
G Tbc1d21 TBC1 domain family, member 21 involved_in ISO (MGI:6490732|PMID:32976492) RGD PMID:32976492 MGI:6490732 NCBI chr 8:58,761,562...58,773,711
Ensembl chr 8:58,761,563...58,773,711
JBrowse link
G Tpgs1 tubulin polyglutamylase complex subunit 1 acts_upstream_of_or_within ISO MGI:2388468 (MGI:2387741|PMID:12242242) RGD PMID:12242242 MGI:2387741 NCBI chr 7:10,029,842...10,035,764
Ensembl chr 7:10,029,854...10,035,764
JBrowse link
G Ttc12 tetratricopeptide repeat domain 12 involved_in ISO
IBA
(PMID:31978331)
GO_REF:0000033
RGD
GO_Central
PMID:31978331 GO_REF:0000033 NCBI chr 8:49,799,916...49,847,940
Ensembl chr 8:49,799,920...49,847,087
JBrowse link
G Ttll1 TTL family tubulin polyglutamylase complex subunit L1 acts_upstream_of_or_within ISO MGI:4297933|MGI:4461777 (MGI:4457964|PMID:20498047), (MGI:5430875|PMID:20442420) RGD PMID:20442420 PMID:20498047 MGI:4457964 MGI:5430875 NCBI chr 7:114,619,509...114,648,850
Ensembl chr 7:114,619,508...114,648,761
JBrowse link
G Ttll5 tubulin tyrosine ligase like 5 acts_upstream_of_or_within ISO (MGI:5498425|PMID:23558686) RGD PMID:23558686 MGI:5498425 NCBI chr 6:105,483,091...105,700,920
Ensembl chr 6:105,483,191...105,700,934
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B acts_upstream_of_or_within ISO MGI:2183933 (MGI:2668287|PMID:12672659) RGD PMID:12672659 MGI:2668287 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
G Zmynd12 zinc finger, MYND-type containing 12 involved_in IEA
ISO
GO_REF:0000107
(PMID:37934199)
Ensembl
RGD
PMID:37934199 GO_REF:0000107 NCBI chr 5:133,026,917...133,059,985
Ensembl chr 5:133,027,009...133,059,995
JBrowse link
sperm mitochondrial sheath assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Armc12 armadillo repeat containing 12 involved_in ISO (MGI:6507113|PMID:33536340) RGD PMID:33536340 MGI:6507113 NCBI chr20:6,587,859...6,598,355
Ensembl chr20:6,587,859...6,598,352
JBrowse link
G Cfap58 cilia and flagella associated protein 58 involved_in ISO (PMID:32791035) RGD PMID:32791035 NCBI chr 1:246,802,691...246,911,363
Ensembl chr 1:246,802,665...246,911,374
JBrowse link
G Gk2 glycerol kinase 2 involved_in ISO (MGI:6355765|PMID:28852571) RGD PMID:28852571 MGI:6355765 NCBI chr14:12,107,071...12,108,923
Ensembl chr14:12,107,020...12,128,473
JBrowse link
G Klc3 kinesin light chain 3 involved_in ISO
ISS
(MGI:5429147|PMID:22561200)
GO_REF:0000024
RGD
UniProt
PMID:22561200 GO_REF:0000024 MGI:5429147 NCBI chr 1:79,045,842...79,055,809
Ensembl chr 1:79,045,844...79,055,416
JBrowse link
G Tbc1d21 TBC1 domain family, member 21 involved_in ISO (MGI:6507113|PMID:33536340) RGD PMID:33536340 MGI:6507113 NCBI chr 8:58,761,562...58,773,711
Ensembl chr 8:58,761,563...58,773,711
JBrowse link
G Vdac3 voltage-dependent anion channel 3 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:7255948|PMID:35228556)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:35228556 GO_REF:0000024 GO_REF:0000107 MGI:7255948 NCBI chr16:69,434,982...69,451,473
Ensembl chr16:69,435,005...69,451,471
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20335
    reproductive process 1833
      cellular process involved in reproduction in multicellular organism 591
        sperm flagellum assembly 55
          sperm axoneme assembly 35
          sperm mitochondrial sheath assembly 6
Path 2
Term Annotations click to browse term
  biological_process 20335
    cellular process 18799
      cellular component organization or biogenesis 7198
        cellular component organization 6887
          cell projection organization 1882
            cell projection assembly 677
              plasma membrane bounded cell projection assembly 663
                cilium assembly 442
                  motile cilium assembly 87
                    sperm flagellum assembly 55
                      sperm axoneme assembly 35
                      sperm mitochondrial sheath assembly 6
paths to the root