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ONTOLOGY REPORT - ANNOTATIONS

Term:regulation of pigmentation
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Accession:GO:0120305 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of the deposition or modulates the distribution of coloring matter in an organism.


show annotations for term's descendants           Sort by:
background adaptation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GNAT1 G protein subunit alpha transducin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24373883) Ensembl
MGI		 PMID:24373883 GO_REF:0000107 NCBI chr 3:50,119,267...50,126,131
Ensembl chr 3:51,354,472...51,360,568 		JBrowse link
G GNAT2 G protein subunit alpha transducin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24373883) Ensembl
MGI		 PMID:24373883 GO_REF:0000107 NCBI chr 1:111,980,855...111,990,686
Ensembl chr 1:111,208,510...111,225,808 		JBrowse link
negative regulation of developmental pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TPCN2 two pore segment channel 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:64,139,512...64,227,913
Ensembl chr11:67,438,635...67,478,106 		JBrowse link
negative regulation of eye pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IHH Indian hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17464332) Ensembl
MGI		 PMID:17464332 GO_REF:0000107 NCBI chr2B:106,312,472...106,319,124
Ensembl chr2B:224,906,271...224,911,506 		JBrowse link
positive regulation of developmental pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9241272) Ensembl
MGI		 PMID:9241272 GO_REF:0000107 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9241272) Ensembl
MGI		 PMID:9241272 GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
positive regulation of melanocyte differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18454205) Ensembl
MGI		 PMID:18454205 GO_REF:0000107 NCBI chr12:45,178,058...45,369,042
Ensembl chr12:46,046,555...46,236,676 		JBrowse link
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18454205) Ensembl
MGI		 PMID:18454205 GO_REF:0000107 NCBI chr 3:64,415,621...64,590,984
Ensembl chr 3:65,792,223...65,967,631 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16427619) Ensembl
MGI		 PMID:16427619 GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G KITLG KIT ligand involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16427619) Ensembl
MGI		 PMID:16427619 GO_REF:0000107 NCBI chr12:86,036,501...86,124,274
Ensembl chr12:89,341,921...89,436,758 		JBrowse link
G ZEB2 zinc finger E-box binding homeobox 2 involved_in ISO (MGI:5574413|PMID:24769727) BHF-UCL PMID:24769727 MGI:5574413 NCBI chr2B:15,325,094...15,460,908
Ensembl chr2B:148,460,904...148,596,500 		JBrowse link
positive regulation of pigment cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:7,852,340...7,902,880
Ensembl chr 6:8,133,721...8,184,194 		JBrowse link
G BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:24,469,225...24,553,163
Ensembl chr15:42,862,112...42,882,316 		JBrowse link
regulation of developmental pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif 20 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18454205)
(PMID:14138974)		 Ensembl
MGI		 PMID:14138974 PMID:18454205 GO_REF:0000107 NCBI chr12:45,178,058...45,369,042
Ensembl chr12:46,046,555...46,236,676 		JBrowse link
G ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18454205) Ensembl
MGI		 PMID:18454205 GO_REF:0000107 NCBI chr 3:64,415,621...64,590,984
Ensembl chr 3:65,792,223...65,967,631 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15818405) Ensembl
MGI		 PMID:15818405 GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
G BCL2L11 BCL2 like 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15818405) Ensembl
MGI		 PMID:15818405 GO_REF:0000107 NCBI chr2A:90,862,070...90,909,833
Ensembl chr2A:112,337,927...112,385,079 		JBrowse link
G EDN3 endothelin 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14138974) Ensembl
MGI		 PMID:14138974 GO_REF:0000107 NCBI chr20:55,652,770...55,678,486
Ensembl chr20:57,012,926...57,038,570 		JBrowse link
G VPS33A VPS33A core subunit of CORVET and HOPS complexes involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12538872) Ensembl
MGI		 PMID:12538872 GO_REF:0000107 NCBI chr12:119,831,693...119,868,132
Ensembl chr12:123,201,663...123,236,019 		JBrowse link
regulation of eye pigmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SPNS2 SPNS lysolipid transporter 2, sphingosine-1-phosphate involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:22664872) Ensembl
MGI		 PMID:22664872 GO_REF:0000107 NCBI chr17:4,554,524...4,593,873
Ensembl chr17:4,547,597...4,584,493 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16440
    pigmentation 105
      regulation of pigmentation 16
        background adaptation + 2
        regulation of developmental pigmentation + 14
Path 2
Term Annotations click to browse term
  biological_process 16440
    biological regulation 11453
      regulation of biological process 11104
        regulation of pigmentation 16
          background adaptation + 2
          regulation of developmental pigmentation + 14
paths to the root