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ONTOLOGY REPORT - ANNOTATIONS


Term:olefinic compound biosynthetic process
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Accession:GO:0120255 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).
Synonyms:exact_synonym: alkene substituted compound anabolic process;   alkene substituted compound anabolism;   alkene substituted compound biosynthesis;   alkene substituted compound biosynthetic process;   alkene substituted compound synthesis


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aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO PMID:19342457
(PMID:19342457)
UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004955442:16,047,965...16,108,862
Ensembl chrNW_004955442:16,045,895...16,108,862
JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO PMID:19342457
(PMID:19342457)
UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004955442:16,047,965...16,108,862
Ensembl chrNW_004955442:16,045,895...16,108,862
JBrowse link
negative regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004955411:450,674...557,213
Ensembl chrNW_004955411:450,674...558,650
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004955414:27,466,636...27,507,186
Ensembl chrNW_004955414:27,456,770...27,508,109
JBrowse link
negative regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp2 bone morphogenetic protein 2 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Bmp5 bone morphogenetic protein 5 involved_in ISO (PMID:19584291) BHF-UCL PMID:19584291 NCBI chrNW_004955411:450,674...557,213
Ensembl chrNW_004955411:450,674...558,650
JBrowse link
G Dkk3 dickkopf WNT signaling pathway inhibitor 3 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004955414:27,466,636...27,507,186
Ensembl chrNW_004955414:27,456,770...27,508,109
JBrowse link
negative regulation of testosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dkkl1 dickkopf like acrosomal protein 1 involved_in ISO (MGI:3839065|PMID:18818293) UniProt PMID:18818293 MGI:3839065 NCBI chrNW_004955559:1,445,082...1,449,167
Ensembl chrNW_004955559:1,445,149...1,449,004
JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:12949260)
(MGI:2675528|PMID:12949260)
UniProt PMID:12949260 MGI:2675528 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
positive regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO (PMID:16527843) UniProt PMID:16527843 NCBI chrNW_004955465:6,053,600...6,201,254
Ensembl chrNW_004955465:6,054,931...6,200,377
JBrowse link
G Dab2 DAB adaptor protein 2 ISO RGD PMID:17303656 RGD:7243836 NCBI chrNW_004955426:23,852,752...23,883,030 JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
positive regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wnt4 Wnt family member 4 involved_in ISO (PMID:16981135) UniProt PMID:16981135 NCBI chrNW_004955452:2,319,446...2,344,740
Ensembl chrNW_004955452:2,319,446...2,344,989
JBrowse link
positive regulation of progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:20133449 RGD:10059648 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scp2 sterol carrier protein 2 involved_in ISO (PMID:1703300) UniProt PMID:1703300 NCBI chrNW_004955464:6,097,241...6,224,287
Ensembl chrNW_004955464:6,094,758...6,224,287
JBrowse link
G Stard3 StAR related lipid transfer domain containing 3 acts_upstream_of_or_within ISO (MGI:3039987|PMID:14963026) MGI PMID:14963026 MGI:3039987 NCBI chrNW_004955451:14,395,088...14,412,041
Ensembl chrNW_004955451:14,394,466...14,413,810
JBrowse link
regulation of aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcn2 chloride voltage-gated channel 2 involved_in ISO (PMID:29403011) UniProt PMID:29403011 NCBI chrNW_004955420:23,138,558...23,152,462
Ensembl chrNW_004955420:23,138,605...23,152,311
JBrowse link
regulation of cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:24369117) ParkinsonsUK-UCL PMID:24369117 NCBI chrNW_004955514:452,548...475,240
Ensembl chrNW_004955514:453,886...464,978
JBrowse link
G H6pd hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase involved_in ISO (PMID:18628520), (PMID:23132696)
(MGI:3623644|PMID:16356929)
UniProt PMID:16356929 PMID:18628520 PMID:23132696 MGI:3623644 NCBI chrNW_004955486:4,088,354...4,115,077
Ensembl chrNW_004955486:4,022,306...4,115,077
JBrowse link
regulation of progesterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgkq diacylglycerol kinase theta involved_in ISO (PMID:24369117) ParkinsonsUK-UCL PMID:24369117 NCBI chrNW_004955514:452,548...475,240
Ensembl chrNW_004955514:453,886...464,978
JBrowse link
G Egr1 early growth response 1 involved_in ISO (MGI:82584|PMID:8703054) UniProt PMID:8703054 MGI:82584 NCBI chrNW_004955418:2,001,509...2,005,269
Ensembl chrNW_004955418:2,002,699...2,005,007
JBrowse link
regulation of testosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prkg1 protein kinase cGMP-dependent 1 ISO RGD PMID:22429315 RGD:7775068 NCBI chrNW_004955425:6,176,335...7,335,867
Ensembl chrNW_004955425:6,176,432...7,331,446
JBrowse link
testosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b1 hydroxysteroid 17-beta dehydrogenase 1 involved_in ISO (MGI:1267145|PMID:9658408) RGD
UniProt
PMID:8612487 PMID:9658408 MGI:1267145 RGD:728619 NCBI chrNW_004955451:16,449,333...16,452,036
Ensembl chrNW_004955451:16,449,683...16,451,945
JBrowse link
G LOC102014960 cholesterol side-chain cleavage enzyme, mitochondrial ISO RGD PMID:19883722 RGD:4145609 NCBI chrNW_004955450:3,433,310...3,484,462
Ensembl chrNW_004955450:3,474,491...3,484,232
JBrowse link
G LOC102023780 aromatase acts_upstream_of_or_within ISO (MGI:1261712|PMID:9618522) MGI PMID:9618522 MGI:1261712 NCBI chrNW_004955409:3,198,622...3,313,072
Ensembl chrNW_004955409:3,266,233...3,313,142
JBrowse link
G Srd5a2 steroid 5 alpha-reductase 2 involved_in ISO (PMID:10898110) UniProt PMID:10898110 NCBI chrNW_004955441:12,149...95,733
Ensembl chrNW_004955441:10,443...95,743
JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:19883722 RGD:4145609 NCBI chrNW_004955463:13,760,089...13,765,245
Ensembl chrNW_004955463:13,760,089...13,765,244
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11938
    metabolic process 7522
      biosynthetic process 3904
        olefinic compound biosynthetic process 21
          (-)-secologanin biosynthetic process 0
          abscisic acid biosynthetic process + 0
          aldosterone biosynthetic process + 8
          all-trans-neoxanthin biosynthetic process 0
          androst-4-ene-3,17-dione biosynthetic process + 0
          chalcone biosynthetic process 0
          chanoclavine-I aldehyde biosynthetic process + 0
          cinnamic acid biosynthetic process 0
          cinnamic acid ester biosynthetic process + 0
          cortisol biosynthetic process + 7
          ferulate biosynthetic process 0
          funalenone biosynthetic process 0
          geraniol biosynthetic process 0
          helvolic acid biosynthetic process + 0
          isopentenol biosynthetic process 0
          kojic acid biosynthetic process + 0
          olefin biosynthetic process + 0
          prenol biosynthetic process 0
          progesterone biosynthetic process + 5
          sinapate biosynthetic process 0
          stilbene biosynthetic process 0
          terrequinone A biosynthetic process + 0
          testosterone biosynthetic process + 8
Path 2
Term Annotations click to browse term
  biological_process 11938
    metabolic process 7522
      organic substance metabolic process 7252
        olefinic compound metabolic process 65
          olefinic compound biosynthetic process 21
            (-)-secologanin biosynthetic process 0
            abscisic acid biosynthetic process + 0
            aldosterone biosynthetic process + 8
            all-trans-neoxanthin biosynthetic process 0
            androst-4-ene-3,17-dione biosynthetic process + 0
            chalcone biosynthetic process 0
            chanoclavine-I aldehyde biosynthetic process + 0
            cinnamic acid biosynthetic process 0
            cinnamic acid ester biosynthetic process + 0
            cortisol biosynthetic process + 7
            ferulate biosynthetic process 0
            funalenone biosynthetic process 0
            geraniol biosynthetic process 0
            helvolic acid biosynthetic process + 0
            isopentenol biosynthetic process 0
            kojic acid biosynthetic process + 0
            olefin biosynthetic process + 0
            prenol biosynthetic process 0
            progesterone biosynthetic process + 5
            sinapate biosynthetic process 0
            stilbene biosynthetic process 0
            terrequinone A biosynthetic process + 0
            testosterone biosynthetic process + 8
paths to the root