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ONTOLOGY REPORT - ANNOTATIONS

Term:hydrocarbon catabolic process
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Accession:GO:0120253 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a hydrocarbon, a compound consisting of carbon and hydrogen only.
Synonyms:exact_synonym: hydrocarbon breakdown;   hydrocarbon catabolism;   hydrocarbon degradation


show annotations for term's descendants           Sort by:
hydrocarbon catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ephx1 epoxide hydrolase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr13:92,714,315...92,744,105
Ensembl chr13:92,714,315...92,790,235 		JBrowse link
carotene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in ISO
IBA
IEA
ISS		 (PMID:11401432), (PMID:17951468), (PMID:24668807)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(MGI:1931377|PMID:11092891), (MGI:3587559|PMID:15951442)		 RGD
GO_Central
Ensembl
UniProt		 PMID:11092891 PMID:11401432 PMID:15951442 PMID:17951468 PMID:24668807 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:1931377 MGI:3587559 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101 		JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in ISO
IBA		 (PMID:21302131)
GO_REF:0000033
(MGI:2159483|PMID:11278918), (MGI:4947204|PMID:21106934)		 RGD
GO_Central		 PMID:11278918 PMID:21106934 PMID:21302131 GO_REF:0000033 MGI:2159483 MGI:4947204 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467 		JBrowse link
G Rps13 ribosomal protein S13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:170,572,925...170,575,355
Ensembl chr 1:170,572,921...170,575,355
Ensembl chr 3:170,572,921...170,575,355 		JBrowse link
G Rps13l1 ribosomal protein S13 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:56,457,121...56,457,669
Ensembl chr 5:56,457,124...56,457,669 		JBrowse link
naphthalene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 involved_in
acts_upstream_of_or_within		 ISO (PMID:10383923)
(PMID:16876762)		 RGD PMID:10383923 PMID:16876762 NCBI chr 1:82,416,107...82,429,897
Ensembl chr 1:82,416,130...82,429,896 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20115
    metabolic process 12288
      hydrocarbon metabolic process 10
        hydrocarbon catabolic process 6
          alkane catabolic process + 0
          alkene catabolic process + 0
          alkyne catabolic process + 0
          benzene catabolic process 0
          ethylbenzene catabolic process + 0
          fluorene catabolic process 0
          naphthalene catabolic process 1
          phenanthrene catabolic process + 0
          styrene catabolic process 0
          terpene catabolic process + 4
          toluene catabolic process + 0
          xylene catabolic process + 0
paths to the root