Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:hydrocarbon catabolic process
go back to main search page
Accession:GO:0120253 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a hydrocarbon, a compound consisting of carbon and hydrogen only.
Synonyms:exact_synonym: hydrocarbon breakdown;   hydrocarbon catabolism;   hydrocarbon degradation

show annotations for term's descendants           Sort by:
 
carotene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:49,637,059...49,673,577
Ensembl chr19:49,637,016...49,673,808 		JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in IBA
ISO		 PMID:21873635
(PMID:21302131)
(MGI:4947204|PMID:21106934)		 RGD PMID:21106934 PMID:21302131, PMID:21873635 MGI:4947204, RGD:13792537 NCBI chr 8:54,965,577...54,990,604
Ensembl chr 8:54,965,583...54,998,864 		JBrowse link
naphthalene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 acts_upstream_of_or_within
involved_in		 ISO (MGI:3655180|PMID:16876762)
(PMID:10383923)		 RGD PMID:10383923 PMID:16876762 MGI:3655180 NCBI chr 1:83,933,974...83,947,804
Ensembl chr 1:83,933,942...83,947,821 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19491
    metabolic process 11797
      organic substance metabolic process 11337
        hydrocarbon metabolic process 6
          hydrocarbon catabolic process 3
            alkane catabolic process + 0
            alkene catabolic process + 0
            alkyne catabolic process + 0
            benzene catabolic process 0
            fluorene catabolic process 0
            naphthalene catabolic process 1
            phenanthrene catabolic process + 0
            styrene catabolic process 0
            terpene catabolic process + 2
            toluene catabolic process + 0
            xylene catabolic process + 0
paths to the root