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ONTOLOGY REPORT - ANNOTATIONS

Term:hydrocarbon catabolic process
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Accession:GO:0120253 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a hydrocarbon, a compound consisting of carbon and hydrogen only.
Synonyms:exact_synonym: hydrocarbon breakdown;   hydrocarbon catabolism;   hydrocarbon degradation


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carotene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in ISO
IEA
IBA
ISS		 (PMID:11401432), (PMID:17951468), (PMID:24668807)
GO_REF:0000107
PMID:21873635
GO_REF:0000024
(MGI:1931377|PMID:11092891), (MGI:3587559|PMID:15951442)		 RGD
Ensembl
UniProt		 PMID:11092891 PMID:11401432 PMID:15951442 PMID:17951468 PMID:24668807 More... GO_REF:0000024 GO_REF:0000107 MGI:1931377 MGI:3587559, RGD:13792537 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101 		JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in ISO
IBA		 (PMID:21302131)
PMID:21873635
(MGI:2159483|PMID:11278918), (MGI:4947204|PMID:21106934)		 RGD PMID:11278918 PMID:21106934 PMID:21302131 PMID:21873635 MGI:2159483 MGI:4947204, RGD:13792537 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467 		JBrowse link
G LOC683961 similar to ribosomal protein S13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:56,457,121...56,457,669
Ensembl chr 5:56,457,124...56,457,669 		JBrowse link
G Rps13 ribosomal protein S13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:170,572,925...170,575,355
Ensembl chr 1:170,572,921...170,575,355
Ensembl chr 3:170,572,921...170,575,355 		JBrowse link
naphthalene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 acts_upstream_of_or_within
involved_in		 ISO (MGI:3655180|PMID:16876762)
(PMID:10383923)		 RGD PMID:10383923 PMID:16876762 MGI:3655180 NCBI chr 1:82,416,107...82,429,897
Ensembl chr 1:82,416,130...82,429,896 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19527
    metabolic process 11509
      organic substance metabolic process 10856
        hydrocarbon metabolic process 8
          hydrocarbon catabolic process 5
            alkane catabolic process + 0
            alkene catabolic process + 0
            alkyne catabolic process + 0
            benzene catabolic process 0
            fluorene catabolic process 0
            naphthalene catabolic process 1
            phenanthrene catabolic process + 0
            styrene catabolic process 0
            terpene catabolic process + 4
            toluene catabolic process + 0
            xylene catabolic process + 0
paths to the root