Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:hydrocarbon metabolic process
go back to main search page
Accession:GO:0120252 term browser browse the term
Definition:The chemical reactions and pathways involving a hydrocarbon, a compound consisting of carbon and hydrogen only.
Synonyms:exact_synonym: hydrocarbon metabolism



show annotations for term's descendants           Sort by:
 
beta-carotene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3767552 (MGI:5638293|PMID:25701869)
Ensembl
RGD
PMID:25701869 GO_REF:0000107 MGI:5638293 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101
JBrowse link
carotene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in IBA
ISO
PMID:21873635
(MGI:1931377|PMID:11092891), (MGI:3587559|PMID:15951442)
(PMID:11401432), (PMID:17951468), (PMID:24668807)
RGD PMID:11092891 PMID:11401432 PMID:15951442 PMID:17951468 PMID:24668807 More... MGI:1931377 MGI:3587559, RGD:13792537 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101
JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in IBA
ISO
PMID:21873635
(MGI:2159483|PMID:11278918), (MGI:4947204|PMID:21106934)
(PMID:21302131)
RGD PMID:11278918 PMID:21106934 PMID:21302131 PMID:21873635 PMID:21873635 MGI:2159483 MGI:4947204, RGD:13792537, RGD:13792537 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
JBrowse link
carotene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 involved_in ISO (PMID:11278918)
(MGI:2159483|PMID:11278918)
RGD PMID:11278918 MGI:2159483 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467
JBrowse link
naphthalene catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp2f4 cytochrome P450, family 2, subfamily f, polypeptide 4 acts_upstream_of_or_within
involved_in
ISO (MGI:3655180|PMID:16876762)
(PMID:10383923)
RGD PMID:10383923 PMID:16876762 MGI:3655180 NCBI chr 1:82,416,108...82,429,897
Ensembl chr 1:82,416,130...82,429,896
JBrowse link
propylene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grin1 glutamate ionotropic receptor NMDA type subunit 1 involved_in ISO (MGI:5320264|PMID:21795692) RGD PMID:21795692 MGI:5320264 NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
JBrowse link
terpene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Th tyrosine hydroxylase IEP RGD PMID:20934257 RGD:5128841 NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767
JBrowse link
toluene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP RGD PMID:19110042 RGD:4766784 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    metabolic process 11824
      organic substance metabolic process 11355
        hydrocarbon metabolic process 6
          benzene metabolic process + 0
          cellular alkane metabolic process + 0
          cellular alkyne metabolic process + 0
          ethylbenzene metabolic process + 0
          hydrocarbon biosynthetic process + 0
          hydrocarbon catabolic process + 3
          olefin metabolic process + 1
          phenanthrene metabolic process + 0
          styrene metabolic process + 0
          terpene metabolic process + 3
          toluene metabolic process + 1
          xylene metabolic process + 0
paths to the root