photoreceptor distal connecting cilium - Ontology Report - Rat Genome Database

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS	{{ watchLinkText }}

Term:	photoreceptor distal connecting cilium	go back to main search page
Accession:	GO:0120206	browse the term
Definition:	The distal region of the photoreceptor connecting cilium is structurally unique to the photoreceptor and is maintained by retina-specific protein, SPATA7, and its interacting partners RPGR and RPGRIP1. It is essential for photoreceptor sensory cilium stability.
Synonyms:	related_synonym:	DCC; photoreceptor DCC

show annotations for term's descendants Sort by:
Rat (7) Mouse (7) Human (7) Chinchilla (7) Bonobo (7) Dog (7) Squirrel (6) Pig (7) Green Monkey (7) Naked Mole-rat (7) All
Genes (7)

photoreceptor distal connecting cilium

term browser

Symbol

Object Name

Qualifiers

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

Abelson helper integration site 1

located_in

(MGI:6194004|PMID:29899041)

NCBI chr 1:15,768,047...15,886,744
Ensembl chr 1:15,762,462...15,891,041

G

centrosomal protein 290

located_in

(MGI:6194004|PMID:29899041)

NCBI chr 7:35,310,071...35,399,392
Ensembl chr 7:35,310,199...35,399,392

G

nephrocystin 1

located_in

(MGI:6194004|PMID:29899041)

NCBI chr 3:114,960,650...115,016,234
Ensembl chr 3:114,960,650...115,016,234

G

nephrocystin 4

located_in

(MGI:6194004|PMID:29899041)

NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706

G

retinitis pigmentosa GTPase regulator

located_in

(MGI:6194004|PMID:29899041)

NCBI chr X:12,566,447...12,628,171
Ensembl chr X:12,566,645...12,747,882

G

RPGR interacting protein 1

located_in

(MGI:6194004|PMID:29899041)

NCBI chr15:24,814,576...24,867,522
Ensembl chr15:24,814,614...24,868,605

G

spermatogenesis associated 7

is_active_in
located_in

PMID:21873635
MGI:5660490 (MGI:6194004|PMID:29899041)
GO_REF:0000107

PMID:29899041 PMID:21873635

GO_REF:0000107 MGI:6194004, RGD:13792537

NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284

Term paths to the root

Path 1
Term	Annotations
cellular_component	20082
cellular anatomical entity	19921
photoreceptor distal connecting cilium	7
Path 2
Term	Annotations
cellular_component	20082
cellular anatomical entity	19921
organelle	13177
membrane-bounded organelle	11690
cilium	745
non-motile cilium	177
9+0 non-motile cilium	137
photoreceptor cell cilium	123
photoreceptor connecting cilium	46
photoreceptor distal connecting cilium	7

paths to the root